Search Results (2,042)

Chinese hickory (Carya cathayensis Sarg.) is an economically important tree species widely cultivated in southeastern China, where trunk canker disease caused by Botryosphaeria dothidea poses a serious threat to tree health and production. Pectin-degrading enzymes are important virulence-associated factors that facilitate fungal colonization and host tissue maceration, but their evolutionary diversification and functional roles in B. dothidea during woody host infection remain poorly understood. Comparative genomic analysis revealed lineage-specific variation in the GH28 glycoside hydrolase family among the examined Botryosphaeriaceae species, with B. dothidea exhibiting an expanded GH28 repertoire relative to the analyzed species. Expression analysis and functional assays revealed that BdGH28_3 showed the highest transcript abundance during infection stage and contributed to the full virulence of B. dothidea. A predicted protein–protein interaction (PPI) network suggested potential associations between BdGH28_3 and other pectinolytic enzymes, including polygalacturonases, pectin lyases, and pectinesterases. Collectively, these findings identify GH28 diversification as a distinctive feature of the B. dothidea genome and establish BdGH28_3 as a virulence-associated member, providing a foundation for investigating GH28-mediated pathogenicity in woody hosts. Full article

Plant cell walls play a crucial role in plant development and evolution. This structure is primarily composed of proteins and polysaccharides, including cellulose, hemicellulose, and pectins. Homogalacturonan (HG), the most abundant pectin in the primary cell wall, is synthesized by α -1,4-D-GALACTURONOSYLTRANSFERASE (GAUT) enzymes, methylesterified, and subsequently secreted into the apoplast. The dynamics of pectin methylesterification is regulated by enzymes such as PECTIN METHYLESTERASES (PMEs) and PECTIN METHYLESTERASE INHIBITORS (PMEIs). Across plant evolution and development, different cell types display distinct domains of pectin methylesterification. The binding of de-methylesterified pectins to the Catharanthus roseus RECEPTOR-LIKE KINASE 1-LIKE (CrRLK1L) proteins and RAPID ALKALINIZATION FACTOR (RALF) peptides is involved in pectin signaling and cell wall integrity maintenance during developmental processes. While phylogenetic studies highlight molecular innovations in pectin metabolism, functional studies remain scarce outside of angiosperms. Furthermore, the explicit role of de-methylesterified pectin in coupling cell wall structure to intracellular signaling has only been demonstrated in angiosperms. Comparative functional studies addressing key evolutionary transitions will ultimately reveal how pectin metabolism has contributed to morphological innovations across plant evolution. Full article

A non-dairy whipping cream was developed by partially replacing cocoa butter substitute with pea protein–high-methoxyl pectin (PP–HMP) emulsion gel containing soybean oil. The effects of substitution levels (10%, 20%, 30%, 40%, and 50%) on the properties of the pre-whipping cream emulsion and the resulting whipped cream were systematically investigated and compared with those of commercial whipped creams. The properties of the pre-whipping emulsion (apparent viscosity and particle size) and whipped cream (hardness, adhesiveness, elastic modulus, and thixotropic loop area) degraded with increasing PP–HMP emulsion gel substitution levels. Overrun and partial coalescence of fat reached their highest values at the 20% substitution level, at which point the whipped cream also exhibited a uniform microstructure and excellent shape retention. The overrun, hardness, and foam stability of non-dairy whipping cream containing 20% PP–HMP emulsion gel were comparable to those of the commercial whipped cream. These findings demonstrate the potential of PP–HMP emulsion gel as a fat substitute for developing non-dairy whipping cream with reduced hydrogenated fat content. Full article

Fusariumoxysporum f. sp. cubense race 4 (Foc 4) causes Fusarium wilt by penetrating root cell walls, yet the molecular basis of cell wall-mediated resistance remains poorly understood. Here, we investigated the transcriptional, enzymatic, and cellular responses of the resistant banana cultivar Dongjiao No. 1 (DJ) and its susceptible mutant ke2 following Foc 4 infection. RNA sequencing revealed that DJ specifically upregulated a pectin degradation cassette comprising pectin methylesterase (PME3-Like), pectin acetylesterase (PAE1), and polygalacturonases (PG1, PG3, PG5, PG-Like-4) at the bud seedling stage. Immunolocalization further revealed robust, tissue-specific PME deployment, with stable abundance at the primary infection site and differential redistribution in aerial tissues. This enzymatic cascade degraded homogalacturonan, confirmed by the simultaneous loss of pectin epitopes recognized by JIM5 and JIM7 antibodies. Additionally, the upregulation of PTI1, MAPK cascades, calcium-dependent protein kinases (CDPK3, CML31), and respiratory burst oxidase homologs (RBOHs) was also observed in DJ. The differential transcription of salicylic acid signaling (TGA1–PR1), jasmonic acid derepression (TIFY/JAZ), and flavonoid phytoalexin biosynthesis in DJ further reinforced the defense response. In contrast, ke2 failed to activate the pectin degradation machinery, exhibited attenuated immune signaling, and retained intact pectin vulnerable to pathogen exploitation. These findings establish pectin degradation-mediated immunity as a resistance mechanism in banana and provide potential targets for Fusarium wilt resistance breeding. Full article

Background: Three-dimensional printing (3DP) is rapidly advancing personalised medicine, yet systematic performance comparison with conventional manufacturing remains limited, particularly for plant-based formulations. Methods: This study compared tablets containing plant-based APIs (cannabidiol, apigenin, and luteolin) produced via conventional hot moulding and semi-solid extrusion (SSE) 3DP. The formulations were evaluated for physicochemical, mechanical, rheological, structural, and drug-release properties. Results: Both manufacturing methods produced tablets with comparable dimensions and mass; however, pronounced formulation-dependent differences were observed in mechanical strength, rheology, and microstructure. The molecular modelling predictions were consistent with the experimental findings. Agar–pectin exhibited the strongest predicted polymer–polymer and polymer–API interactions, including multiple hydrogen bonds, and formed a comparatively dense and cohesive matrix associated with slower API release. In contrast, the weaker interactions predicted for gelatine–pectin were associated with a less cohesive and more porous matrix that facilitated medium penetration, API diffusion, and drug release. SSE printlets generally exhibited greater porosity and more heterogeneous internal architectures than moulded tablets, resulting in enhanced drug release of approximately 95%. Micro-CT analysis provided important structural confirmation; API incorporation increased the void volume of gelatine–pectin printlets from 1.15% to 8.77%, demonstrating that disruption of polymer interactions contributed to pore formation and enhanced molecular diffusion. The observed release behaviour correlated with predicted molecular interactions and experimentally observed microstructural features, where increased porosity and weaker polymer–API interactions facilitated enhanced drug diffusion. Conclusions: Overall, SSE-3DP outperformed conventional moulding, demonstrating superior tunability and performance. This work provides a mechanistically informed strategy for designing plant-based, personalised natural products using 3DP technologies. Full article

In this study, peanut oil bodies were stabilized using different concentrations of Nicandra physalodes (Linn.) Gaertn. polysaccharide (NPGP) to fabricate composite emulsion gels. The physical stability, rheological properties, and 3D printing performance of the resulting gels were systematically investigated. The results revealed that the composite systems were capable of self-gelation when the NPGP concentration exceeded 1.0 wt%. Furthermore, the gel hardness and physical stability were improved with the elevation of NPGP concentration. Within the linear viscoelastic region, the samples exhibited dominant elastic responses and maintained solid-like properties throughout the entire test period (G′ > G″). Further 3D printing tests demonstrated that the composite systems possessed favorable formability, with printing precision and printing stability reaching 98.86 ± 0.14% and 97.11 ± 0.07%, respectively. Collectively, as a promising commercial pectin-like polysaccharide resource, NPGP can effectively enhance the stability of peanut oil body emulsions. This study also provides novel strategies and theoretical foundations for the structural regulation and functional utilization of oil bodies. Full article

Akebia trifoliata is an underutilized fruit with distinctive sensory characteristics and potential for beverage development; however, its application is limited by flavor-balance and suspension-stability challenges. This study optimized the formulation and short-term physical stability of A. trifoliata cloudy juice using single-factor tests, orthogonal experiments, and fuzzy mathematical sensory evaluation. Each treatment was independently prepared in triplicate (n = 3), with each preparation considered an experimental replicate. The effects of pulp, sugar, and citric acid concentrations on sensory quality were evaluated, with citric acid identified as the dominant factor affecting overall acceptability. The highest-performing basic formulation among the tested combinations contained 14% pulp, 8% sugar, and 0.05% citric acid, yielding a cloudy juice with characteristic aroma, smooth texture, and balanced sweet–sour taste. To improve short-term suspension stability, pectin, guar gum, xanthan gum, sodium alginate, and sodium carboxymethyl cellulose were assessed. Pectin showed the strongest individual stabilizing effect, although excessive viscosity reduced sensory acceptability. Orthogonal optimization identified a compound stabilizer system of 0.03% pectin, 0.05% guar gum, and 0.06% xanthan gum as the formulation providing the most favorable balance between the suspension stability coefficient and trained-panel sensory score among the tested combinations. The fuzzy mathematical evaluation approach provided a structured framework for integrating multiple sensory and stability-related indicators into formulation decisions. These findings provide a practical basis for the formulation and short-term stability screening of A. trifoliata cloudy juice as a value-added beverage and support broader utilization of this indigenous fruit resource. Long-term storage stability, microbial safety, bioactive properties, rheological behavior, and consumer acceptance require further evaluation. Full article

Functional annotation gaps limit the interpretation of carbohydrate metabolism in silage microbiomes. We developed Context-Aware Annotation Completion (CAAC), a framework integrating ESM2 embeddings, genomic-neighborhood features, three-class classification, confidence-tiered neighbor voting, and Enzyme Commission (EC)-to-KEGG Orthology (KO) mapping. CAAC was applied to 21 metagenomes from uninoculated and Lacticaseibacillus paracasei-inoculated silages sampled before ensiling and at 7 and 90 days. Five-fold cross-validation yielded an F1-macro of 84.64% for negative, positive, and hard-sequence classification. Among 800,000 selected annotation-poor sequences, 545,671 Tier 1 or Tier 2 predictions passed the annotation-validity and EC-to-KO mapping criteria, of which 524,814 were eligible for sample-level annotation supplementation. After silage-focused filtering and KO–EC summarization, these predictions yielded 102 KO–EC features repeatedly detected across the silage metagenomes and increased coverage in 25 of 47 carbohydrate-metabolism pathways, mainly by recovering enzyme-level components related to starch and sucrose, cellulose and cellobiose, xylan and hemicellulose, and pectin and glucuronate metabolism. Taxon-linked analyses further revealed treatment- and stage-associated patterns in the taxonomic sources of the supplemented annotations. A database-derived temporal benchmark using the July 2025 CAZy release showed 94.94% Tier 1 family-level annotation-transfer consistency. CAAC extends the enzyme-level interpretation of under-annotated silage metagenomes, while the inferred assignments remain computational predictions requiring experimental validation. Full article

Lignocellulosic fruit peel waste represents an abundant, carbon-neutral feedstock for green biohydrogen production via dark fermentation, yet its rigid compact structure and high cellulose crystallinity severely restrict saccharification and fermentative hydrogen yield. In this study, a hydrothermal acidification pretreatment strategy was proposed to boost dark fermentative biohydrogen generation from navel orange peel waste, and systematic investigations were conducted to reveal the regulating mechanisms of key pretreatment parameters (hydrochloric acid concentration, pretreatment temperature, duration) on reducing sugar release and hydrogen-producing performance. Multiscale characterizations including SEM, XRD, FTIR, and TG were integrated to unravel the microstructural and chemical compositional evolution of raw and pretreated substrates. The results demonstrated that hydrothermal acidification effectively disrupted the dense lignocellulosic network of navel orange peel, lowered cellulose crystallinity, and greatly improved substrate accessibility for hydrolytic reactions and microbial adhesion. Under the optimal pretreatment condition (1.0 mol/L HCl, 120 °C, 1 h), the concentration of released reducing sugars reached 10.2 g/L, which was 67.2% higher than that of untreated raw peel. The corresponding maximum cumulative hydrogen yield attained 36.5 mL H₂/g TS, representing a 67.4% improvement relative to the untreated control group. Pearson correlation analysis verified that pretreatment temperature, acid concentration, and duration exhibited strong positive correlations with hemicellulose and cellulose removal efficiencies, while excessive pretreatment (HCl > 1.0 mol/L, temperature > 120 °C, duration > 1 h) generated inhibitory by-products that suppressed microbial hydrogen evolution. This study comprehensively clarifies the structural modification and biohydrogen promotion mechanism of hydrothermal acidification pretreatment on pectin-rich biomass, and delivers a cost-effective, facile technical route for high-value energy valorization and harmless disposal of fruit processing solid wastes. Full article

This study aimed to investigate the regulatory effects of dietary dandelion supplementation on the ruminal physiological status of lambs fed a high-concentrate diet. Twenty-two 6-month-old female crossbred lambs with an initial body weight of 32.05 ± 0.43 kg were randomly assigned to two groups (n = 11 per group): the HC group (fed a high-concentrate basal diet) and the DD group (basal diet supplemented with 2 g/kg dandelion powder), with a 14-day adaptation and 60-day experimental period. The results showed that compared with the HC group, dandelion supplementation significantly improved lamb growth performance and modulated ruminal fermentation parameters and tissue morphology. For inflammatory indices, the concentration of interleukin-10 (IL-10) was significantly increased, while the concentrations of interleukin-1β (IL-1β), lipopolysaccharide (LPS) and histamine (HIS) were significantly decreased (p < 0.05). Meanwhile, dandelion supplementation upregulated the mRNA expression of ruminal epithelial tight junction proteins and hexokinase II (HK-II), while downregulating the mRNA expression of myeloid differentiation factor 88 (MyD88), voltage-dependent anion channel 1 (VDAC1), inositol 1,4,5-trisphosphate receptor (IP3R), NLR family pyrin domain containing 3 (NLRP3), and caspase-1. Metagenomic analysis revealed that dandelion supplementation did not alter ruminal microbial α-diversity, but slightly modulated community composition and functional profiles. The abundances of dominant phyla Bacteroidota and Bacillota showed only slight fluctuations, while fiber-degrading genera (Xylanibacter, Quinella, Selenomonas) showed a trend toward enrichment, and proteolytic taxa were decreased. CAZyme analysis revealed an upward trend in families CE4, CE8, GH32, and GH13_46 (pectin/starch degradation) and a downward trend in GH73, GH27, and GT14 (oligosaccharide/peptidoglycan/polysaccharide metabolism) in the DD group. KEGG orthology annotation suggested that nominal KO differences were mainly associated with carbohydrate metabolism pathways, including starch and sucrose metabolism and peptidoglycan biosynthesis. None of these features, however, remained significant after FDR correction (raw p < 0.05; all q > 0.05). Collectively, dietary dandelion supplementation was associated with alterations in ruminal physiological status and microbial community in lambs fed a high-concentrate diet, providing foundational data for dandelion application in lamb diets under short-term feeding conditions. Full article

Pectin, a natural biopolymer, is a cost-effective, biocompatible, non-toxic, abundant, and flexible material, making it suitable for recording high-quality bioelectric signals from the dynamic surface of the human body. In this work, pectin-based flexible bioelectrodes were developed for the non-invasive monitoring of biopotentials. The bioelectrodes are composed of pectin, polyaniline emeraldine salt (PANI-ES), glycerol, and polydimethylsiloxane (PDMS) and therefore abbreviated as PPGP. The PPGP electrodes demonstrated a bulk electrical conductivity of (7.54 ± 0.81) × 10⁻³ S/cm, a very low impedance of 34 Ω, and a high charge storage capacity of 4.63 ± 2.70 mC/cm². The surface morphology of the PPGP electrode plays a crucial role in enhancing biopotential signal detection by improving adhesion to skin contours. PPGP electrodes have been successfully used for high-fidelity electromyographic (EMG) bioelectric signal measurements. The developed PPGP bioelectrodes have the potential to advance next-generation human–machine interface (HMI) technologies and wearable healthcare systems, including prosthetic control, rehabilitation monitoring, and assistive communication devices. Full article

Pectin oligosaccharides have emerged as promising prebiotics whose biological activities are closely tied to their structural features, particularly monosaccharide composition. However, systematic experimental evidence regarding how different monosaccharide compositions collectively influence gut microbiota modulation, SCFA production, and the metabolomic responses of mixed pectin oligosaccharides remains limited. To address this gap, Pool-I (27.92% galacturonic acid, rich in neutral sugars including galactose, glucose, and arabinose) and Pool-II (98.73% galacturonic acid) were evaluated by comparison with inulin, a reference prebiotic, using an in vitro human fecal fermentation model. Microbial community structure, SCFA production, and metabolomic profiles were assessed at 12 h and 24 h via 16S rRNA gene sequencing, gas chromatography, and untargeted metabolomics, respectively. Inulin exhibited superior enrichment of Actinobacteria (predominantly Bifidobacterium) and consistently higher total SCFA production (24.07 ± 0.25 mmol/L acetic acid at 24 h vs. 20.27 ± 0.28 and 20.53 ± 0.76 mmol/L for pectin oligosaccharides), particularly propionic and butyric acids. Although Pool-I and Pool-II yielded lower overall SCFA concentrations, they significantly enriched beneficial SCFA-producing genera (including Coprococcus_3, Butyricicoccus, and Parabacteroides) at 24 h. Metabolomic analysis revealed that Pool-I uniquely upregulated twenty-six differential metabolites (VIP > 1, p < 0.05), including taurine (VIP = 2.40, p < 0.001), L-proline (VIP = 1.72, p = 0.015), and pantothenate (VIP = 1.63, p < 0.001), while reducing uric acid (VIP = 1.05, p < 0.001), whereas only two differential metabolites were identified for Pool-II. We conclude that monosaccharide composition is a key determinant of the prebiotic efficacy of pectin oligosaccharides: Pool-II selectively promotes SCFA-producing taxa, whereas Pool-I elicits broader metabolic regulation. These effects provide a theoretical foundation for developing pectin oligosaccharides as potential prebiotic candidates. Full article

Selenium (Se) is an essential trace element for humans and animals, with nutritional functions and abiotic stress regulation capacity, and has been confirmed to alleviate heavy metal toxicity and inhibit its accumulation in crops. Soil lead contamination has become a prominent environmental safety problem in agricultural production, particularly in South China, and lead over-standard in edible crops poses irreversible threats to the human nervous system and blood circulation through food chain transmission. As an efficient exogenous antagonist, Se can comprehensively regulate the absorption, translocation, and compartmentalization of lead in soil–plant systems. This review systematically summarizes the interactive effects of soil physicochemical properties, crop genotypes, and Se speciation on plant lead uptake, and focuses on phytochelatin synthase (PCS), the core rate-limiting enzyme for intracellular heavy metal chelation, to elucidate the molecular cascade of Se-mediated PCS-dependent lead detoxification. We further outline multi-pathway agronomic Se applications for lead reduction; analyze key limiting factors, including Se concentration, application method, and rhizosphere microbial community; and discuss contradictory results and unresolved questions in existing studies. Current evidence confirms that appropriate Se treatment increases glutathione (GSH) content via antioxidant system regulation, upregulates PCS gene transcription and activity, promotes phytochelatins (PCs) polymerization, and forms stable PC-Pb complexes sequestered in vacuoles to reduce cytoplasmic lead mobility. Additionally, Se reshapes rhizosphere microbial community composition to lower soil Pb²⁺ bioavailability and enhances lignin and pectin biosynthesis in root cell walls to physically block root Pb²⁺ influx. Nevertheless, critical knowledge gaps remain unaddressed: (1) upstream signal transduction cascades triggering Se-induced differential PCS expression; (2) precise Pb²⁺ binding sites and affinity of PC oligomers; (3) valence-dependent disparities in selenate, selenite, and nano-Se (SeNPs) modulating PCS activity; and (4) standardized field Se fertilization protocols tailored to staple and tropical tuber crops such as cassava. This review provides systematic theoretical reference and technical foundations for dissecting Se-Pb antagonistic molecular networks, developing Se-enriched low Pb²⁺ functional fertilizers, and mitigating Pb²⁺ contamination risk in agricultural commodities. Full article

Pectin is a naturally occurring biopolymer extensively used for applications in the pharmaceutical, biotechnology, and food industries, and is abundantly present in lemon by-products. Although lemon peels represent a highly promising raw material, the structure of pectin is strongly influenced by extraction and drying processes, and the resulting attributes remain insufficiently understood. The present study systematically investigates the impact of conventional hot acid extraction using three different acidifying agents (citric, sulphuric, and hydrochloric) in combination with two drying techniques (oven-drying and freeze-drying) on the physicochemical, structural, thermal, and viscosity–shear rate properties of pectin obtained from lemon by-products (Citrus limon, Portuguese Eureka variety) following the prior recovery of bioactive compounds (essential oils and phenolic compounds). The results demonstrated that citric acid extraction followed by freeze-drying yielded the highest pectin recovery, at approximately 26.7%, highlighting the suitability of this approach for efficient by-product valorisation. Oven-dried pectins exhibited higher moisture contents (8.5–10%) and lower lightness values (L* = 57.02–65.67), indicating darker colouration compared to freeze-dried pectins (L* = 78.82–83.75). All extracted pectins presented a degree of esterification (DE ≥ 50%), classifying them as high-methoxyl pectins. The galacturonic acid (GalA) content ranged from 37.6 to 48.9% for oven-dried samples and increased to 44.1–58.6% for freeze-dried samples. Furthermore, pectin obtained from lemon by-products exhibited a well-defined structural organisation and enhanced thermal stability, especially for freeze-dried pectin samples, and suitable rheological properties, with no statistically significant variations observed between different acids or drying conditions, supporting its technological suitability for applications in the food, cosmetic, and pharmaceutical industries. Full article

Fruit cracking negatively affects apple quality and marketability, reducing profitability. Therefore, this study aims to evaluate the effects of foliar applications of 0.5% (w/v) calcium chloride (CaCl₂), 0.1% (w/v) boric acid (H₃BO₃; hereafter referred to as B), and their combination (CaCl₂ + B) on fruit cracking, quality, and antioxidant metabolism in “Arisoo” apples. Treatments were applied 45, 30, and 15 days before harvest, while control trees received water sprays. Foliar application increased calcium and B concentrations in the leaves, fruit peel, and flesh tissues. Compared with the control, the CaCl₂, B, and CaCl₂ + B treatments reduced fruit cracking incidence by 52.6%, 32.4%, and 87.4%, respectively, and cracking severity by 55.6%, 44.4%, and 77.8%, respectively. Among the treatments, the combined CaCl₂ + B treatment showing the greatest effect in both cracking incidence and severity. Additionally, the CaCl₂ and CaCl₂ + B treatments improved flesh firmness by 5.0% and 5.6%, compared with the control. However, foliar applications did not affect fruit weight, soluble solids content, titratable acidity, starch pattern index, and color. Foliar treatments reduced lipid peroxidation, increased antioxidant enzyme activities, including catalase, superoxide dismutase, and peroxidase, and enhanced total phenolics and DPPH radical scavenging activity. Polygalacturonase and pectin methylesterase enzyme activities also decreased, particularly in the fruit peel under combined treatment. These findings suggest that foliar CaCl₂ and B treatments can reduce fruit cracking in “Arisoo” apples, with the combined treatment showing greater effects than individual treatments. Full article