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20 pages, 4109 KiB  
Article
Quantifying Baseflow with Radon, H and O Isotopes and Field Parameters in the Urbanized Catchment of the Little Jukskei River, Johannesburg
by Khutjo Diphofe, Roger Diamond and Francois Kotze
Hydrology 2025, 12(8), 203; https://doi.org/10.3390/hydrology12080203 - 2 Aug 2025
Viewed by 149
Abstract
Understanding groundwater and surface water interaction is critical for managing water resources, particularly in water-stressed and rapidly urbanizing areas, such as many parts of Africa. A survey was conducted of borehole, spring, seep and river water radon, δ2H, δ18O [...] Read more.
Understanding groundwater and surface water interaction is critical for managing water resources, particularly in water-stressed and rapidly urbanizing areas, such as many parts of Africa. A survey was conducted of borehole, spring, seep and river water radon, δ2H, δ18O and field parameters in the Jukskei River catchment, Johannesburg. Average values of electrical conductivity (EC) were 274 and 411 μS·cm−1 for groundwater and surface water, and similarly for radon, 37,000 and 1100 Bq·m−3, with a groundwater high of 196,000 Bq·m−3 associated with a structural lineament. High radon was a good indicator of baseflow, highest at the end of the rainy season (March) and lowest at the end of the dry season (September), with the FINIFLUX model computing groundwater inflow as 2.5–4.7 L·m−1s−1. High EC was a poorer indicator of baseflow, also considering the possibility of wastewater with high EC, typical in urban areas. Groundwater δ2H and δ18O values are spread widely, suggesting recharge from both normal and unusual rainfall periods. A slight shift from the local meteoric water line indicates light evaporation during recharge. Surface water δ2H and δ18O is clustered, pointing to regular groundwater input along the stream, supporting the findings from radon. Given the importance of groundwater, further study using the same parameters or additional analytes is advisable in the urban area of Johannesburg or other cities. Full article
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23 pages, 2750 KiB  
Article
Seasonal Sea Surface Temperatures from Mercenaria spp. During the Plio-Pleistocene: Oxygen Isotope Versus Clumped Isotope Paleothermometers
by Garrett F. N. Braniecki, Donna Surge and Ethan G. Hyland
Geosciences 2025, 15(8), 295; https://doi.org/10.3390/geosciences15080295 - 2 Aug 2025
Viewed by 160
Abstract
The Mid-Piacenzian Warm Interval (MPWI) is marked by warmer temperatures and higher atmospheric CO2 levels than today, making it an analogue for late-21st-century-warming, whereas the early Pleistocene cooling is more like today. We compare seasonal growth temperatures derived from oxygen isotope ratios [...] Read more.
The Mid-Piacenzian Warm Interval (MPWI) is marked by warmer temperatures and higher atmospheric CO2 levels than today, making it an analogue for late-21st-century-warming, whereas the early Pleistocene cooling is more like today. We compare seasonal growth temperatures derived from oxygen isotope ratios (δ18O) and clumped isotopes (∆47) in Mercenaria. Modern shells were previously collected from coastal NC. The fossil shells are from the Duplin (MPWI) and Waccamaw Formations (early Pleistocene), NC. Oxygen isotope ratios range from −2.2‰ to 2.3‰ (modern), −0.9‰ to 2.4‰ (MPWI), and −0.9‰ to 2.9‰ (early Pleistocene). The values of Δ47 range from 0.576‰ to 0.639‰ (modern), 0.566‰ to 0.621‰ (MPWI), and 0.581‰ to 0.615‰ (early Pleistocene). We show that Mercenaria do not require a species-specific ∆47 calibration. Modern and MPWI ∆47-derived summer/winter temperatures (SST∆47) and seasonal amplitudes are indistinguishable from δ18O-derived temperatures. The early Pleistocene summer SST∆47 is indistinguishable from δ18O-derived temperatures, but the winter SST∆47 is warmer by 5 °C and may reflect within-shell time averaging. The modern summer/winter SST∆47 are indistinguishable from the MPWI, but the MPWI has a lower seasonal amplitude by 5 °C. Compared to our calculated δ18Osw values, modeled values for the MPWI are within error but are much lower, and they are not within error for the early Pleistocene. Full article
(This article belongs to the Special Issue Pliocene Studies in Paleobiology, Paleoenvironment and Paleoclimate)
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17 pages, 3193 KiB  
Article
Effects of Nitrogen and Phosphorus Additions on the Stability of Soil Carbon Fractions in Subtropical Castanopsis sclerophylla Forests
by Yunze Dai, Xiaoniu Xu and LeVan Cuong
Forests 2025, 16(8), 1264; https://doi.org/10.3390/f16081264 - 2 Aug 2025
Viewed by 119
Abstract
Soil organic carbon (SOC) pool plays an extremely important role in regulating the global carbon (C) cycle and climate change. Atmospheric nitrogen (N) and phosphorus (P) deposition caused by human activities has significant impacts on soil C sequestration potential of terrestrial ecosystem. To [...] Read more.
Soil organic carbon (SOC) pool plays an extremely important role in regulating the global carbon (C) cycle and climate change. Atmospheric nitrogen (N) and phosphorus (P) deposition caused by human activities has significant impacts on soil C sequestration potential of terrestrial ecosystem. To investigate the effects of N and P deposition on soil C sequestration and C-N coupling relationship in broad-leaved evergreen forests, a 6-year field nutrient regulation experiment was implemented in subtropical Castanopsis sclerophylla forests with four different N and P additions: N addition (100 kg N·hm−2·year−1), N + P (100 kg N·hm−2·year−1 + 50 kg P·hm−2·year−1), P addition (50 kg P·hm−2·year−1), and CK (0 kg N·hm−2·year−1). The changes in the C and N contents and stable isotope distributions (δ13C and δ15N) of different soil organic fractions were examined. The results showed that the SOC and total nitrogen (STN) (p > 0.05) increased with N addition, while SOC significantly decreased with P addition (p < 0.05), and N + P treatment has low effect on SOC, STN (p > 0.05). By density grouping, it was found that N addition significantly increased light fraction C and N (LFOC, LFN), significantly decreased the light fraction C to N ratio (LFOC/N) (p < 0.05), and increased heavy fraction C and N (HFOC, HFN) accumulation and light fraction to total organic C ratio (LFOC/SOC, p > 0.05). Contrary to N addition, P addition was detrimental to the accumulation of LFOC, LFN and reduced LFOC/SOC. It was found that different reactive oxidized carbon (ROC) increased under N addition but ROC/SOC did not change, while N + P and P treatments increased ROC/SOC, resulting in a decrease in SOC chemical stability. Stable isotope analysis showed that N addition promoted the accumulation of new soil organic matter, whereas P addition enhanced the transformation and utilization of C and N from pre-existing organic matter. Additionally, N addition indirectly increased LFOC by significantly decreasing pH; significantly contributed to LFOC and ROC by increasing STN accumulation promoted by NO3-N and NH4+-N; and decreased light fraction δ13C by significantly increasing dissolved organic C (p < 0.05). P addition had directly significant negative effect on LFOC and SOC (p < 0.05). In conclusion, six-year N deposition enhances soil C and N sequestration while the P enrichment reduces the content of soil C, N fractions and stability in Castanopsis sclerophylla forests. The results provide a scientific basis for predicting the soil C sink function of evergreen broad-leaved forest ecosystem under the background of future climate change. Full article
(This article belongs to the Section Forest Soil)
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23 pages, 1268 KiB  
Article
Combining Stable Isotope Labeling and Candidate Substrate–Product Pair Networks Reveals Lignan, Oligolignol, and Chicoric Acid Biosynthesis in Flax Seedlings (Linum usitatissimum L.)
by Benjamin Thiombiano, Ahlam Mentag, Manon Paniez, Romain Roulard, Paulo Marcelo, François Mesnard and Rebecca Dauwe
Plants 2025, 14(15), 2371; https://doi.org/10.3390/plants14152371 - 1 Aug 2025
Viewed by 173
Abstract
Functional foods like flax (Linum usitatissimum L.) are rich sources of specialized metabolites that contribute to their nutritional and health-promoting properties. Understanding the biosynthesis of these compounds is essential for improving their quality and potential applications. However, dissecting complex metabolic networks in [...] Read more.
Functional foods like flax (Linum usitatissimum L.) are rich sources of specialized metabolites that contribute to their nutritional and health-promoting properties. Understanding the biosynthesis of these compounds is essential for improving their quality and potential applications. However, dissecting complex metabolic networks in plants remains challenging due to the dynamic nature and interconnectedness of biosynthetic pathways. In this study, we present a synergistic approach combining stable isotopic labeling (SIL), Candidate Substrate–Product Pair (CSPP) networks, and a time-course study with high temporal resolution to reveal the biosynthetic fluxes shaping phenylpropanoid metabolism in young flax seedlings. By feeding the seedlings with 13C3-p-coumaric acid and isolating isotopically labeled metabolization products prior to the construction of CSPP networks, the biochemical validity of the connections in the network was supported by SIL, independent of spectral similarity or abundance correlation. This method, in combination with multistage mass spectrometry (MSn), allowed confident structural proposals of lignans, neolignans, and hydroxycinnamic acid conjugates, including the presence of newly identified chicoric acid and related tartaric acid esters in flax. High-resolution time-course analyses revealed successive waves of metabolite formation, providing insights into distinct biosynthetic fluxes toward lignans and early lignification intermediates. No evidence was found here for the involvement of chlorogenic or caftaric acid intermediates in chicoric acid biosynthesis in flax, as has been described in other species. Instead, our findings suggest that in flax seedlings, chicoric acid is synthesized through successive hydroxylation steps of p-coumaroyl tartaric acid esters. This work demonstrates the power of combining SIL and CSPP strategies to uncover novel metabolic routes and highlights the nutritional potential of flax sprouts rich in chicoric acid. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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11 pages, 711 KiB  
Article
Cadmium Accumulation and Regulation in the Freshwater Mussel Anodonta woodiana
by Xiubao Chen, Chao Song, Jiazhen Jiang, Tao Jiang, Junren Xue, Ibrahim Bah, Mengying Gu, Meiyi Wang and Shunlong Meng
Toxics 2025, 13(8), 646; https://doi.org/10.3390/toxics13080646 - 30 Jul 2025
Viewed by 151
Abstract
Cadmium (Cd) pollution poses a serious threat to freshwater ecosystems. The freshwater mussel Anodonta woodiana is increasingly used as a bioindicator for monitoring Cd pollution in aquatic environments. However, the primary routes of Cd accumulation in A. woodiana remain unclear, and the molecular [...] Read more.
Cadmium (Cd) pollution poses a serious threat to freshwater ecosystems. The freshwater mussel Anodonta woodiana is increasingly used as a bioindicator for monitoring Cd pollution in aquatic environments. However, the primary routes of Cd accumulation in A. woodiana remain unclear, and the molecular regulatory mechanisms underlying Cd accumulation are poorly understood. To address these gaps, this study employed a novel stable isotope dual-tracer technique to trace Cd from water (waterborne 112Cd) and the green alga Chlorella vulgaris (dietary 113Cd) during the simultaneous exposure experiment. Comparative transcriptomic analysis was then conducted to characterize molecular responses in A. woodiana following Cd exposure. The results showed that although newly accumulated 112Cd and 113Cd increased with exposure concentration and duration, the relative importance of 112Cd (91.6 ± 2.8%) was significantly higher than that of 113Cd (8.4 ± 2.8%) (p < 0.05). Cd exposure induced differentially expressed genes primarily enriched in the metabolic processes, cellular processes, and/or the ubiquitin-mediated proteolysis pathway. Within the ubiquitin-mediated proteolysis pathway, TRIP12 (E3 ubiquitin-protein ligase TRIP12) and Cul5 (cullin-5) were significantly upregulated. The findings will provide critical insights for interpreting Cd biomonitoring data in freshwater environments using mussels as bioindicators. Full article
(This article belongs to the Special Issue The Impact of Heavy Metals on Aquatic Ecosystems)
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18 pages, 1800 KiB  
Article
Chemometric Evaluation of Official and Advanced Methods for Detecting Olive Oil Authenticity in Canned Tuna
by Marjeta Mencin, Milena Bučar-Miklavčič, Maja Podgornik and Nives Ogrinc
Foods 2025, 14(15), 2667; https://doi.org/10.3390/foods14152667 - 29 Jul 2025
Viewed by 244
Abstract
This study evaluated the authenticity of olive oil in canned tuna products from the Slovenian market using both official methods, including fatty acid (FA) profiling, determination of the equivalent carbon number difference (ΔECN42), and sterol analysis, and an advanced method: stable carbon isotope [...] Read more.
This study evaluated the authenticity of olive oil in canned tuna products from the Slovenian market using both official methods, including fatty acid (FA) profiling, determination of the equivalent carbon number difference (ΔECN42), and sterol analysis, and an advanced method: stable carbon isotope analysis (δ13C) of FAs obtained through compound-specific isotope analysis (CSIA). Results from both methods confirmed that all 10 samples were authentic, as per the limits set by EU Regulation 2022/2104 and supported by the scientific literature. Method performance was further evaluated by adulterating the olive oil from the canned tuna with 5–20% vegetable oil (VO) or hazelnut oil (HO). While FA analysis struggled to differentiate adulterants with similar FA profiles, CSIA of FAs significantly improved detection. However, distinguishing between VO and HO blended samples remained challenging. PLS-DA analysis further supported the potential of using δ13C values of FA for food authentication. Storage of adulterated samples also influenced FA composition, leading to significant changes in MUFA/PUFA ratios and δ13C values, which became less negative, likely due to oxidative degradation. In summary, the combination of official and advanced methods, supported by chemometric analysis, offers a robust approach to ensuring the authenticity of olive oil in canned tuna. Full article
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24 pages, 5270 KiB  
Article
Ecophysiological Keys to the Success of a Native-Expansive Mediterranean Species in Threatened Coastal Dune Habitats
by Mario Fernández-Martínez, Carmen Jiménez-Carrasco, Mari Cruz Díaz Barradas, Juan B. Gallego-Fernández and María Zunzunegui
Plants 2025, 14(15), 2342; https://doi.org/10.3390/plants14152342 - 29 Jul 2025
Viewed by 190
Abstract
Range-expanding species, or neonatives, are native plants that spread beyond their original range due to recent climate or human-induced environmental changes. Retama monosperma was initially planted near the Guadalquivir estuary for dune stabilisation. However, changes in the sedimentary regime and animal-mediated dispersal have [...] Read more.
Range-expanding species, or neonatives, are native plants that spread beyond their original range due to recent climate or human-induced environmental changes. Retama monosperma was initially planted near the Guadalquivir estuary for dune stabilisation. However, changes in the sedimentary regime and animal-mediated dispersal have facilitated its exponential expansion, threatening endemic species and critical dune habitats. The main objective of this study was to identify the key functional traits that may explain the competitive advantage and rapid spread of R. monosperma in coastal dune ecosystems. We compared its seasonal responses with those of three co-occurring woody species, two native (Juniperus phoenicea and J. macrocarpa) and one naturalised (Pinus pinea), at two sites differing in groundwater availability within a coastal dune area (Doñana National Park, Spain). We measured water relations, leaf traits, stomatal conductance, photochemical efficiency, stable isotopes, and shoot elongation in 12 individuals per species. Repeated-measures ANOVA showed significant effects of species and species × season interaction for relative water content, shoot elongation, effective photochemical efficiency, and stable isotopes. R. monosperma showed significantly higher shoot elongation, relative water content, and photochemical efficiency in summer compared with the other species. Stable isotope data confirmed its nitrogen-fixing capacity. This characteristic, along with the higher seasonal plasticity, contributes to its competitive advantage. Given the ecological fragility of coastal dunes, understanding the functional traits favouring the success of neonatives such as R. monosperma is essential for biodiversity conservation and ecosystem management. Full article
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14 pages, 1855 KiB  
Article
Response of Tree-Ring Oxygen Isotopes to Climate Variations in the Banarud Area in the West Part of the Alborz Mountains
by Yajun Wang, Shengqian Chen, Haichao Xie, Yanan Su, Shuai Ma and Tingting Xie
Forests 2025, 16(8), 1238; https://doi.org/10.3390/f16081238 - 28 Jul 2025
Viewed by 204
Abstract
Stable oxygen isotopes in tree rings (δ18O) serve as important proxies for climate change and offer unique advantages for climate reconstruction in arid and semi-arid regions. We established an annual δ18O chronology spanning 1964–2023 using Juniperus excelsa tree-ring samples [...] Read more.
Stable oxygen isotopes in tree rings (δ18O) serve as important proxies for climate change and offer unique advantages for climate reconstruction in arid and semi-arid regions. We established an annual δ18O chronology spanning 1964–2023 using Juniperus excelsa tree-ring samples collected from the Alborz Mountains in Iran. We analyzed relationships between δ18O and key climate variables: precipitation, temperature, Palmer Drought Severity Index (PDSI), vapor pressure (VP), and potential evapotranspiration (PET). Correlation analysis reveals that tree-ring δ18O is highly sensitive to hydroclimatic variations. Tree-ring cellulose δ18O shows significant negative correlations with annual total precipitation and spring PDSI, and significant positive correlations with spring temperature (particularly maximum temperature), April VP, and spring PET. The strongest correlation occurs with spring PET. These results indicate that δ18O responds strongly to the balance between springtime moisture supply (precipitation and soil moisture) and atmospheric evaporative demand (temperature, VP, and PET), reflecting an integrated signal of both regional moisture availability and energy input. The pronounced response of δ18O to spring evaporative conditions highlights its potential for capturing high-resolution changes in spring climatic conditions. Our δ18O series remained stable from the 1960s to the 1990s, but showed greater interannual variability after 2000, likely linked to regional warming and climate instability. A comparison with the δ18O variations from the eastern Alborz Mountains indicates that, despite some differences in magnitude, δ18O records from the western and eastern Alborz Mountains show broadly similar variability patterns. On a larger climatic scale, δ18O correlates significantly and positively with the Niño 3.4 index but shows no significant correlation with the Arctic Oscillation (AO) or the North Atlantic Oscillation (NAO). This suggests that ENSO-driven interannual variability in the tropical Pacific plays a key role in regulating regional hydroclimatic processes. This study confirms the strong potential of tree-ring oxygen isotopes from the Alborz Mountains for reconstructing hydroclimatic conditions and high-frequency climate variability. Full article
(This article belongs to the Section Forest Meteorology and Climate Change)
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21 pages, 4796 KiB  
Article
Hydrogeochemical Characteristics, Formation Mechanisms, and Groundwater Evaluation in the Central Dawen River Basin, Northern China
by Caiping Hu, Kangning Peng, Henghua Zhu, Sen Li, Peng Qin, Yanzhen Hu and Nan Wang
Water 2025, 17(15), 2238; https://doi.org/10.3390/w17152238 - 27 Jul 2025
Viewed by 327
Abstract
Rapid socio-economic development and the impact of human activities have exerted tremendous pressure on the groundwater system of the Dawen River Basin (DRB), the largest tributary in the middle and lower reaches of the Yellow River. Hydrochemical studies on the DRB have largely [...] Read more.
Rapid socio-economic development and the impact of human activities have exerted tremendous pressure on the groundwater system of the Dawen River Basin (DRB), the largest tributary in the middle and lower reaches of the Yellow River. Hydrochemical studies on the DRB have largely centered on the upstream Muwen River catchment and downstream Dongping Lake, with some focusing solely on karst groundwater. Basin-wide evaluations suggest good overall groundwater quality, but moderate to severe contamination is confined to the lower Dongping Lake area. The hydrogeologically complex mid-reach, where the Muwen and Chaiwen rivers merge, warrants specific focus. This region, adjacent to populous areas and industrial/agricultural zones, features diverse aquifer systems, necessitating a thorough analysis of its hydrochemistry and origins. This study presents an integrated hydrochemical, isotopic investigation and EWQI evaluation of groundwater quality and formation mechanisms within the multiple groundwater types of the central DRB. Central DRB groundwater has a pH of 7.5–8.2 (avg. 7.8) and TDSs at 450–2420 mg/L (avg. 1075.4 mg/L) and is mainly brackish, with Ca2+ as the primary cation (68.3% of total cations) and SO42− (33.6%) and NO3 (28.4%) as key anions. The Piper diagram reveals complex hydrochemical types, primarily HCO3·SO4-Ca and SO4·Cl-Ca. Isotopic analysis (δ2H, δ18O) confirms atmospheric precipitation as the principal recharge source, with pore water showing evaporative enrichment due to shallow depths. The Gibbs diagram and ion ratios demonstrate that hydrochemistry is primarily controlled by silicate and carbonate weathering (especially calcite dissolution), active cation exchange, and anthropogenic influences. EWQI assessment (avg. 156.2) indicates generally “good” overall quality but significant spatial variability. Pore water exhibits the highest exceedance rates (50% > Class III), driven by nitrate pollution from intensive vegetable cultivation in eastern areas (Xiyangzhuang–Liangzhuang) and sulfate contamination from gypsum mining (Guojialou–Nanxiyao). Karst water (26.7% > Class III) shows localized pollution belts (Huafeng–Dongzhuang) linked to coal mining and industrial discharges. Compared to basin-wide studies suggesting good quality in mid-upper reaches, this intensive mid-reach sampling identifies critical localized pollution zones within an overall low-EWQI background. The findings highlight the necessity for aquifer-specific and land-use-targeted groundwater protection strategies in this hydrogeologically complex region. Full article
(This article belongs to the Section Hydrogeology)
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19 pages, 1606 KiB  
Review
Isotopic Studies in South American Mammals: Thirty Years of Paleoecological Discoveries
by Dánae Sanz-Pérez, Rodrigo L. Tomassini and Manuel Hernández Fernández
Geosciences 2025, 15(8), 284; https://doi.org/10.3390/geosciences15080284 - 27 Jul 2025
Viewed by 437
Abstract
Stable isotope analysis has become a key tool in paleontology, providing insights into ancient diets, ecosystems, climates, and environmental shifts. Despite the growing importance of isotopic studies in South America, no comprehensive bibliometric review has been conducted until now. This study addresses that [...] Read more.
Stable isotope analysis has become a key tool in paleontology, providing insights into ancient diets, ecosystems, climates, and environmental shifts. Despite the growing importance of isotopic studies in South America, no comprehensive bibliometric review has been conducted until now. This study addresses that gap, analyzing the development of the field over the past thirty years. Our results show a rapidly expanding discipline, especially in the last five years, with increasing publication rates and participation from South American researchers, particularly in Brazil and Argentina. However, the analysis also reveals persistent biases: notably, a strong focus on the Quaternary period, which limits broader evolutionary interpretations. Keyword co-occurrence points to dominant themes such as paleodiet, paleoecology, and megafaunal extinction, while highlighting new trends like ecological niche modeling and nitrogen isotope applications. The co-authorship network reflects high levels of collaboration, particularly with Spain and the United States. A marked gender imbalance in authorship is also evident, calling attention to the need for greater inclusivity. This review emphasizes the importance of addressing taxonomic and temporal gaps, strengthening interdisciplinary and international networks, and promoting equity in order to ensure the continued growth and global relevance of isotopic paleontology in South America. Full article
(This article belongs to the Section Sedimentology, Stratigraphy and Palaeontology)
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15 pages, 1897 KiB  
Article
Dual Mechanisms of Nitrate in Alleviating Ammonium Toxicity: Enhanced Photosynthesis and Optimized Ammonium Utilization in Orychophragmus violaceus
by Kaiyan Zhang, Haitao Li, Hongtao Hang, Xinhua He and Yanyou Wu
Agronomy 2025, 15(8), 1789; https://doi.org/10.3390/agronomy15081789 - 25 Jul 2025
Viewed by 249
Abstract
Ammonium (NH4+) toxicity impairs plant growth, but nitrate (NO3) can mitigate this effect through unresolved mechanisms. Using leaf δ13C values (photosynthetic capacity) and a bidirectional 15N tracer (NH4+ assimilation efficiency and source [...] Read more.
Ammonium (NH4+) toxicity impairs plant growth, but nitrate (NO3) can mitigate this effect through unresolved mechanisms. Using leaf δ13C values (photosynthetic capacity) and a bidirectional 15N tracer (NH4+ assimilation efficiency and source utilization), this study investigated these mechanisms in 35-day-old Orychophragmus violaceus plantlets grown in modified Murashige and Skoog media under varying NH4+:NO3 ratios. 15N isotope fractionation during NH4+ (same fixed 20 mM NH4Cl) assimilation decreased with increasing NO3 supply (10, 20, and 40 mM NaNO3). Under 20 mM NH4+15N = −2.64‰) at two 15NO3-labels (δ15N-NO3 = 8.08‰, low 15N, L) and (δ15N-NO3 = 22.67‰, high 15N, H), increasing NO3 concentrations enhanced NO3 assimilation, alleviating acidic stress from NH4+ and improving photosynthesis. Higher NO3 levels also increased NH4+ utilization efficiency, reducing futile NH4+ cycling and decreasing associated 15N fractionation during assimilation. Our results demonstrate that NO3 alleviates NH4+ toxicity primarily by enhancing photosynthetic performance and optimizing NH4+ utilization efficiency. Full article
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15 pages, 650 KiB  
Article
Advanced Isotopic Techniques to Investigate Cultural Heritage: The Research Activities at the iCONa Laboratory
by Noemi Mantile, Simona Altieri, Maria Rosa di Cicco, Valentina Giacometti and Carmine Lubritto
Heritage 2025, 8(8), 296; https://doi.org/10.3390/heritage8080296 - 24 Jul 2025
Viewed by 214
Abstract
Isotopic analyses are useful tools with a wide range of applications, including environmental studies, archaeology and biomedicine. Founded in 2019 at the University of Campania “Luigi Vanvitelli”, the iCONa laboratory specialises in stable isotope mass spectrometry, with a particular focus on cultural heritage. [...] Read more.
Isotopic analyses are useful tools with a wide range of applications, including environmental studies, archaeology and biomedicine. Founded in 2019 at the University of Campania “Luigi Vanvitelli”, the iCONa laboratory specialises in stable isotope mass spectrometry, with a particular focus on cultural heritage. The laboratory performs carbon, nitrogen and oxygen isotopic analyses, including the most recent advances in compound-specific stable isotope analysis of amino acids (CSIA-AAs). In addition to these analytical services, iCONa provides chemical and physical sample preparation for a variety of sample types. This paper focuses on our applications in the field of cultural heritage, exploring how the analysis of stable isotopes performed on archaeological remains can be used to reconstruct past subsistence strategies and human behaviours. We also discuss the challenges inherent in isotopic analysis and recent methodological advances in the field. Full article
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17 pages, 4524 KiB  
Article
Growth and Water-Use Efficiency of European Beech and Turkey Oak at Low-Elevation Site
by Negar Rezaie, Ettore D’Andrea, Marco Ciolfi, Enrico Brugnoli and Silvia Portarena
Forests 2025, 16(8), 1210; https://doi.org/10.3390/f16081210 - 23 Jul 2025
Viewed by 754
Abstract
In Italy, beech and Turkey oak are among the most widespread tree species, thriving across various climatic zones. However, rising temperatures and prolonged droughts significantly affect their physiological performance and growth dynamics. To assess their long-term responses to climate change, mature beech and [...] Read more.
In Italy, beech and Turkey oak are among the most widespread tree species, thriving across various climatic zones. However, rising temperatures and prolonged droughts significantly affect their physiological performance and growth dynamics. To assess their long-term responses to climate change, mature beech and Turkey oak trees were studied in Central Italy at an elevation of 450 m. Using dendrochronological and stable isotope analyses (1981–2020), their growth patterns and physiological adaptations were evaluated. Beech exhibited a higher growth rate, with a basal area increment (BAI) of 17.1 ± 1.1 cm2 year−1, compared to Turkey oak, showing a BAI of 12.7 ± 0.96 cm2 year−1. Both species actively responded to increasing atmospheric CO2 levels. Additionally, spring and the previous summer’s climatic conditions played a key role in growth, while summer temperature and precipitation influenced carbon discrimination. For beech, correlations between BAI and iWUE (intrinsic water efficiency, defined as the ratio between photosynthesis and stomatal conductance) were initially weak and not statistically significant. However, the correlation became significant, strengthening steadily into the early 2000s, likely related to thinning of the beech trees. For Turkey oak, the correlation was already significant and strong from the beginning of the analysis period (1981), persisting until the late 1990s. Our findings suggest that both species actively adjust their iWUE in response to an increasing atmospheric CO2 concentration. However, while Turkey oak’s iWUE and BAI relationship remains unaffected by the likely thinning, beech benefits from reduced competition for light, nutrients, and water. Despite climate change’s impact on marginal populations, microclimatic conditions allow beech to outperform Turkey oak, a species typically better suited to drier climates. Full article
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17 pages, 2126 KiB  
Article
Stable Carbon and Nitrogen Isotope Signatures in Three Pondweed Species—A Case Study of Rivers and Lakes in Northern Poland
by Zofia Wrosz, Krzysztof Banaś, Marek Merdalski and Eugeniusz Pronin
Plants 2025, 14(15), 2261; https://doi.org/10.3390/plants14152261 - 22 Jul 2025
Viewed by 194
Abstract
Aquatic plants, as sedentary lifestyle organisms that accumulate chemical substances from their surroundings, can serve as valuable indicators of long-term anthropogenic pressure. In Poland, water monitoring is limited both spatially and temporally, which hampers a comprehensive assessment of water quality. Since the implementation [...] Read more.
Aquatic plants, as sedentary lifestyle organisms that accumulate chemical substances from their surroundings, can serve as valuable indicators of long-term anthropogenic pressure. In Poland, water monitoring is limited both spatially and temporally, which hampers a comprehensive assessment of water quality. Since the implementation of the Water Framework Directive (WFD), biotic elements, including macrophytes, have played an increasingly important role in water monitoring. Moreover, running waters, due to their dynamic nature, are susceptible to episodic pollution inputs that may be difficult to detect during isolated, point-in-time sampling campaigns. The analysis of stable carbon (δ13C) and nitrogen (δ15N) isotope signatures in macrophytes enables the identification of elemental sources, including potential pollutants. Research conducted between 2008 and 2011 encompassed 38 sites along 15 rivers and 108 sites across 21 lakes in northern Poland. This study focused on the isotope signatures of three pondweed species: Stuckenia pectinata, Potamogeton perfoliatus, and Potamogeton crispus. The results revealed statistically significant differences in the δ13C and δ15N values of plant organic matter between river and lake environments. Higher δ15N values were observed in rivers, whereas higher δ13C values were recorded in lakes. Spearman correlation analysis showed a negative relationship between δ13C and δ15N, as well as correlations between δ15N and the concentrations of Ca2+ and HCO3. A positive correlation was also found between δ13C and dissolved oxygen levels. These findings confirm the utility of δ13C and, in particular, δ15N as indicators of anthropogenic eutrophication, including potentially domestic sewage input and its impact on aquatic ecosystems. Full article
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20 pages, 12298 KiB  
Article
Impact of Metastatic Microenvironment on Physiology and Metabolism of Small Cell Neuroendocrine Prostate Cancer Patient-Derived Xenografts
by Shubhangi Agarwal, Deepti Upadhyay, Jinny Sun, Emilie Decavel-Bueff, Robert A. Bok, Romelyn Delos Santos, Said Al Muzhahimi, Rosalie Nolley, Jason Crane, John Kurhanewicz, Donna M. Peehl and Renuka Sriram
Cancers 2025, 17(14), 2385; https://doi.org/10.3390/cancers17142385 - 18 Jul 2025
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Abstract
Background: Potent androgen receptor pathway inhibitors induce small cell neuroendocrine prostate cancer (SCNC), a highly aggressive subtype of metastatic androgen deprivation-resistant prostate cancer (ARPC) with limited treatment options and poor survival rates. Patients with metastases in the liver have a poor prognosis relative [...] Read more.
Background: Potent androgen receptor pathway inhibitors induce small cell neuroendocrine prostate cancer (SCNC), a highly aggressive subtype of metastatic androgen deprivation-resistant prostate cancer (ARPC) with limited treatment options and poor survival rates. Patients with metastases in the liver have a poor prognosis relative to those with bone metastases alone. The mechanisms that underlie the different behavior of ARPC in bone vs. liver may involve factors intrinsic to the tumor cell, tumor microenvironment, and/or systemic factors, and identifying these factors is critical to improved diagnosis and treatment of SCNC. Metabolic reprogramming is a fundamental strategy of tumor cells to colonize and proliferate in microenvironments distinct from the primary site. Understanding the metabolic plasticity of cancer cells may reveal novel approaches to imaging and treating metastases more effectively. Methods: Using magnetic resonance (MR) imaging and spectroscopy, we interrogated the physiological and metabolic characteristics of SCNC patient-derived xenografts (PDXs) propagated in the bone and liver, and used correlative biochemical, immunohistochemical, and transcriptomic measures to understand the biological underpinnings of the observed imaging metrics. Results: We found that the influence of the microenvironment on physiologic measures using MRI was variable among PDXs. However, the MR measure of glycolytic capacity in the liver using hyperpolarized 13C pyruvic acid recapitulated the enzyme activity (lactate dehydrogenase), cofactor (nicotinamide adenine dinucleotide), and stable isotope measures of fractional enrichment of lactate. While in the bone, the congruence of the glycolytic components was lost and potentially weighted by the interaction of cancer cells with osteoclasts/osteoblasts. Conclusion: While there was little impact of microenvironmental factors on metabolism, the physiological measures (cellularity and perfusion) are highly variable and necessitate the use of combined hyperpolarized 13C MRI and multiparametric (anatomic, diffusion-, and perfusion- weighted) 1H MRI to better characterize pre-treatment tumor characteristics, which will be crucial to evaluate treatment response. Full article
(This article belongs to the Special Issue Magnetic Resonance in Cancer Research)
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