Search Results (10)

The quality and flavor of tea leaves are significantly influenced by chemical composition, with the content of free amino acids serving as a key indicator for assessing the quality of Tencha. Accurately and quickly measuring free amino acids during tea processing is crucial for monitoring and optimizing production processes. However, traditional chemical analysis methods are often time-consuming and costly, limiting their application in real-time quality control. Hyperspectral imaging (HSI) has shown significant effectiveness as a component detection tool in various agricultural applications. This study employs VNIR-HSI combined with machine learning algorithms to develop a model for visualizing the total free amino acid content in Tencha samples that have undergone different processing steps on the production line. Four pretreating methods were employed to preprocess the spectra, and partial least squares regression (PLSR) and least squares support vector machine regression (LS–SVR) models were established from the perspectives of individual processes and the entire process. Combining competitive adaptive reweighted sampling (CARS) and variable iterative space shrinkage approach (VISSA) methods for characteristic band selection, specific bands were chosen to predict the amino acid content. By comparing modeling evaluation indicators for each model, the optimal model was identified: the overall model CT+CARS+PLSR, with predictive indicators Rc² = 0.9885, Rp² = 0.9566, RMSEC = 0.0956, RMSEP = 0.1749, RPD = 4.8021, enabling the visualization of total free amino acid content in processed Tencha leaves. Here, we establish a benchmark for machine learning-based HSI, integrating this technology into the tea processing workflow to provide a real-time decision support tool for quality control, offering a novel method for the rapid and accurate prediction of free amino acids during tea processing. This achievement not only provides a scientific basis for the tea processing sector but also opens new avenues for the application of hyperspectral imaging technology in food science. Full article

Spectral imaging technique has been widely applied in plant phenotype analysis to improve plant trait selection and genetic advantages. The latest developments and applications of various optical imaging techniques in plant phenotypes were reviewed, and their advantages and applicability were compared. X-ray computed tomography (X-ray CT) and light detection and ranging (LiDAR) are more suitable for the three-dimensional reconstruction of plant surfaces, tissues, and organs. Chlorophyll fluorescence imaging (ChlF) and thermal imaging (TI) can be used to measure the physiological phenotype characteristics of plants. Specific symptoms caused by nutrient deficiency can be detected by hyperspectral and multispectral imaging, LiDAR, and ChlF. Future plant phenotype research based on spectral imaging can be more closely integrated with plant physiological processes. It can more effectively support the research in related disciplines, such as metabolomics and genomics, and focus on micro-scale activities, such as oxygen transport and intercellular chlorophyll transmission. Full article

The potential of hyperspectral imaging (HSI) and synchrotron phase-contrast micro computed tomography (SR-µCT) was evaluated to determine changes in chickpea quality during storage. Chickpea samples were stored for 16 wk at different combinations of moisture contents (MC of 9%, 11%, 13%, and 15% wet basis) and temperatures (10 °C, 20 °C, and 30 °C). Hyperspectral imaging was utilized to investigate the overall quality deterioration, and SR-µCT was used to study the microstructural changes during storage. Principal component analysis (PCA) and Partial Least Squares Discriminant Analysis (PLS-DA) were used as multivariate data analysis approaches for HSI data. Principal component analysis successfully grouped the samples based on relative humidity (RH) and storage temperatures, and the PLS-DA classification also resulted in reliable accuracy (between 80 and 99%) for RH-based and temperature-based classification. The SR-µCT results revealed that microstructural changes in kernels (9% and 15% MC) were dominant at higher temperatures (above 20 °C) as compared to lower temperatures (10 °C) during storage due to accelerated spoilage at higher temperatures (above 20 °C). Chickpeas which had internal irregularities like cracked endosperm and air spaces before storage were spoiled at lower moisture from 8 wk of storage. Full article

Coded aperture snapshot spectral imaging (CASSI) is a new imaging mode that captures the spectral characteristics of materials in real scenes. It encodes three-dimensional spatial–spectral data into two-dimensional snapshot measurements, and then recovers the original hyperspectral image (HSI) through a reconstruction algorithm. Hyperspectral data have multi-scale coupling correlations in both spatial and spectral dimensions. Designing a network architecture that effectively represents this coupling correlation is crucial for enhancing reconstruction quality. Although the convolutional neural network (CNN) can effectively represent local details, it cannot capture long-range correlation well. The Transformer excels at representing long-range correlation within the local window, but there are also issues of over-smoothing and loss of details. In order to cope with these problems, this paper proposes a dual-branch CNN-Transformer complementary module (DualCT). Its CNN branch mainly focuses on learning the spatial details of hyperspectral images, and the Transformer branch captures the global correlation between spectral bands. These two branches are linked through bidirectional interactions to promote the effective fusion of spatial–spectral features of the two branches. By utilizing characteristics of CASSI imaging, the residual mask attention is also designed and encapsulated in the DualCT module to refine the fused features. Furthermore, by using the DualCT module as a basic component, a multi-scale encoding and decoding model is designed to capture multi-scale spatial–spectral features of hyperspectral images and achieve end-to-end reconstruction. Experiments show that the proposed network can effectively improve reconstruction quality, and ablation experiments also verify the effectiveness of our network design. Full article

Seeds play a critical role in ensuring food security for the earth’s 8 billion people. There is great biodiversity in plant seed content traits worldwide. Consequently, the development of robust, rapid, and high-throughput methods is required for seed quality evaluation and acceleration of crop improvement. There has been considerable progress in the past 20 years in various non-destructive methods to uncover and understand plant seed phenomics. This review highlights recent advances in non-destructive seed phenomics techniques, including Fourier Transform near infrared (FT-NIR), Dispersive-Diode Array (DA-NIR), Single-Kernel (SKNIR), Micro-Electromechanical Systems (MEMS-NIR) spectroscopy, Hyperspectral Imaging (HSI), and Micro-Computed Tomography Imaging (micro-CT). The potential applications of NIR spectroscopy are expected to continue to rise as more seed researchers, breeders, and growers successfully adopt it as a powerful non-destructive method for seed quality phenomics. It will also discuss the advantages and limitations that need to be solved for each technique and how each method could help breeders and industry with trait identification, measurement, classification, and screening or sorting of seed nutritive traits. Finally, this review will focus on the future outlook for promoting and accelerating crop improvement and sustainability. Full article

Oral cancer (OC) is a deadly disease with a high mortality and complex etiology. Artificial intelligence (AI) is one of the outstanding innovations in technology used in dental science. This paper intends to report on the application and performance of AI in diagnosis and predicting the occurrence of OC. In this study, we carried out data search through an electronic search in several renowned databases, which mainly included PubMed, Google Scholar, Scopus, Embase, Cochrane, Web of Science, and the Saudi Digital Library for articles that were published between January 2000 to March 2021. We included 16 articles that met the eligibility criteria and were critically analyzed using QUADAS-2. AI can precisely analyze an enormous dataset of images (fluorescent, hyperspectral, cytology, CT images, etc.) to diagnose OC. AI can accurately predict the occurrence of OC, as compared to conventional methods, by analyzing predisposing factors like age, gender, tobacco habits, and bio-markers. The precision and accuracy of AI in diagnosis as well as predicting the occurrence are higher than the current, existing clinical strategies, as well as conventional statistics like cox regression analysis and logistic regression. Full article

Relying on large scale labeled datasets, deep learning has achieved good performance in image classification tasks. In agricultural and biological engineering, image annotation is time-consuming and expensive. It also requires annotators to have technical skills in specific areas. Obtaining the ground truth is difficult because natural images are expensive. In addition, images in these areas are usually stored as multichannel images, such as computed tomography (CT) images, magnetic resonance images (MRI), and hyperspectral images (HSI). In this paper, we present a framework using active learning and deep learning for multichannel image classification. We use three active learning algorithms, including least confidence, margin sampling, and entropy, as the selection criteria. Based on this framework, we further introduce an “image pool” to make full advantage of images generated by data augmentation. To prove the availability of the proposed framework, we present a case study on agricultural hyperspectral image classification. The results show that the proposed framework achieves better performance compared with the deep learning model. Manual annotation of all the training sets achieves an encouraging accuracy. In comparison, using active learning algorithm of entropy and image pool achieves a similar accuracy with only part of the whole training set manually annotated. In practical application, the proposed framework can remarkably reduce labeling effort during the model development and upadting processes, and can be applied to multichannel image classification in agricultural and biological engineering. Full article

Hyperspectral X-ray CT (HXCT) technology provides not only structural imaging but also the information of material components therein. The main purpose of this study is to investigate the effect of various reconstruction algorithms on reconstructed X-ray absorption spectra (XAS) of components shown in the CT image by means of HXCT. In this paper, taking 3D printing polymer as an example, seven kinds of commonly used polymers such as thermoplastic elastomer (TPE), carbon fiber reinforced polyamide (PA-CF), acrylonitrile butadiene styrene (ABS), polylactic acid (PLA), ultraviolet photosensitive resin (UV9400), polyethylene terephthalate glycol (PETG), and polyvinyl alcohol (PVA) were selected as samples for hyperspectral CT reconstruction experiments. Seven kinds of 3D printing polymer and two interfering samples were divided into a training set and test sets. First, structural images of specimens were reconstructed by Filtered Back-Projection (FBP), Algebra Reconstruction Technique (ART) and Maximum-Likelihood Expectation-Maximization (ML-EM). Secondly, reconstructed XAS were extracted from the pixels of region of interest (ROI) compartmentalized in the images. Thirdly, the results of principal component analysis (PCA) demonstrated that the first four principal components contain the main features of reconstructed XAS, so we adopted Artificial Neural Network (ANN) trained by the reconstructed XAS expressed by the first four principal components in the training set to identify that the XAS of corresponding polymers exist in both of test sets from the training set. The result of ANN displays that FBP has the best performance of classification, whose ten-fold cross-validation accuracy reached 99%. It suggests that hyperspectral CT reconstruction is a promising way of getting image features and material features at the same time, which can be used in medical imaging and nondestructive testing. Full article

Salinity is one of the most important stress factors in crop production, particularly in arid regions. This research focuses on the effect of salinity on the growth of lettuce plants; three solutions with different levels of salinity were considered and compared (S1 = 50, S2 = 100 and S3 = 150 mM NaCl) with a control solution (Ct = 0 mM NaCl). The osmotic potential and water content of the leaves were measured, and hyperspectral images of the surfaces of 40 leaves (10 leaves per treatment) were taken after two weeks of growth. The mean spectra of the leaves (n = 32,000) were pre-processed by means of a Savitzky–Golay algorithm and standard normal variate normalization. Principal component analysis was then performed on a calibration set of 28 mean spectra, yielding an initial model for salinity effect detection. A second model was subsequently proposed based on an index computing an approximation to the second derivative at the red edge region. Both models were applied to all the hyperspectral images to obtain the corresponding artificial images, distinguishing between the 28 that were used to extract the calibration mean spectra and the rest that constituted an external validation. Those virtual images were studied using analysis of variance in order to compare their ability for detecting salinity effects on the leaves. Both models showed significant differences between each salinity level, and the hyperspectral images allowed observations of the distribution of the salinity effects on the leaf surfaces, which were more intense in the areas distant from the veins. However, the index-based model is simpler and easier to apply because it is based solely on the reflectance at three different wavelengths, thus allowing for the implementation of less expensive multispectral devices. Full article

Given the rapid development of plant genomic technologies, a lack of access to plant phenotyping capabilities limits our ability to dissect the genetics of quantitative traits. Effective, high-throughput phenotyping platforms have recently been developed to solve this problem. In high-throughput phenotyping platforms, a variety of imaging methodologies are being used to collect data for quantitative studies of complex traits related to the growth, yield and adaptation to biotic or abiotic stress (disease, insects, drought and salinity). These imaging techniques include visible imaging (machine vision), imaging spectroscopy (multispectral and hyperspectral remote sensing), thermal infrared imaging, fluorescence imaging, 3D imaging and tomographic imaging (MRT, PET and CT). This paper presents a brief review on these imaging techniques and their applications in plant phenotyping. The features used to apply these imaging techniques to plant phenotyping are described and discussed in this review. Full article