Search Results (84)

Reductive soil disinfestation (RSD) significantly alters soil characteristics, yet its combined effects with bacterial inoculation on subsequent rhizospheric microbial community composition remains poorly understood. To address this knowledge gap, we investigated the effects of RSD and endophytic Brevibacillus laterosporus inoculation on the composition, network, and predicted function of peanut rhizospheric bacteria and fungi. Our results demonstrated that RSD and B. laterosporus inoculation substantially increased rhizospheric bacterial diversity while reducing fungal diversity. Specifically, B. laterosporus-enhanced RSD significantly reshaped the bacterial community, resulting in increased relative abundances of Chloroflexi, Desulfobacterota, and Myxococcota while decreasing those of Firmicutes, Gemmatimonadota, and Acidobacteriota. The fungal community exhibited a more consistent response to RSD and B. laterosporus amendment, with reduced proportions of Ascomycota and Gemmatimonadota but an increase in Chytridiomycota. Network analysis revealed that B. laterosporus inoculation and RSD enhanced the bacterial species complexity and keystone taxa. Furthermore, canonical correspondence analysis indicated strong associations between the soil bacterial community and soil properties, including Eh, EC, NO₃⁻-N, and SOC. Our findings highlight that the shifts in bacterial taxa induced by B. laterosporus inoculation and RSD, particularly the keystone taxa identified in the network, may contribute to the suppression of soil-borne pathogens. Overall, this study provides a novel insight into the shifts in rhizospheric bacterial and fungal communities and their ecological functions after bacteria inoculation and RSD treatment. Full article

The oriental fruit fly (B. dorsalis) poses a critical threat to domestic mandarin trade, necessitating effective phytosanitary measures. This study evaluated ethyl formate (EF) and phosphine (PH₃) fumigation as alternative disinfestation methods, either alone or in combination with cold treatment, using B. scutellata, pumpkin fruit fly, as a surrogate species. Eggs and third-instar larvae were tested under both naked and inoculated conditions. Results indicated that larvae were more susceptible to treatment than eggs. The LT_99% values for cold treatment (1.7 °C) were 8.6 and 12.4 days under naked and inoculated conditions, respectively. EF LCt_99% values were 265.7 and 1111.0 g h/m³. EF (LCt_50%) combined with PH₃ (1.0 g/m³) achieved up to 100% mortality, while EF (LCt_50%) followed by cold treatment (1.7 °C for 1–3 days) significantly enhanced mortality compared to cold treatment alone. This study offers foundational data to optimize EF-based quarantine treatments against B. dorsalis, supporting shorter treatment times and more cost-effective quarantine practices. Future studies should validate these findings under practical field conditions. Full article

Traditional methods of microbial quantification of irrigation water using colony counts from agar culture require dedicated laboratory space and trained personnel, limiting their on-site applicability. Dehydrated Petrifilm™ plates are a simpler alternative but still require 2–3 days to culture. Adenosine triphosphate (ATP) tests may offer a fast and reliable method for quantifying microbes in water. In this study, we compared (a) microbial quantification based on ATP assays with Petrifilm™-based assays, and (b) we evaluated the effectiveness of cold plasma or ozone treatments in controlling microbial growth at various oxidation–reduction potential (ORP) levels. Lake water was recirculated through an ozone or cold plasma treatment system until a target ORP of 700 mV was reached. Samples were collected at various ORP levels and plated for aerobic bacteria and yeast and mold counts using Petrifilm™ plates. The free and total ATP concentrations were measured using the Hygiena EnSURE luminometer and its accompanying free and total ATP swabs. Microbial ATP was calculated by subtracting the free from the total ATP. Cold plasma and ozone showed similar effects on microbial inactivation at 700 mV (p < 0.05). Both treatments achieved complete fungal inactivation at 600–700 mV ORP, bacterial inactivation at 600 mV ORP, and near-complete inactivation of microbial ATP at 600–700 mV. A moderate positive correlation (Pearson’s correlation = 0.39 and Spearman’s rank correlation = 0.39) was observed between the Petrifilm™ bacterial counts and microbial ATP levels, suggesting ATP quantification could complement Petrifilm™ for rapid and non-selective onsite microbial assessment of irrigation water. Full article

Thaumatotibia leucotreta, an important citrus pest in southern Africa, is subject to phytosanitary regulations for certain export markets. A systems approach has been developed as an alternative to standalone postharvest disinfestation methods, integrating multiple risk mitigation steps, including preharvest infestation monitoring. This study aimed to validate an existing preharvest monitoring protocol based on fallen fruit collected under designated data trees and to develop a novel monitoring system based on sampling of sanitation fruit. Monitoring was conducted in seven Navel orange orchards (N = 7 each year) during the 2021 and 2022 seasons, representing high and low infestation levels, respectively. Infestation levels were assessed over 11–12 weeks by inspecting fruit beneath four sets of five trees and all sanitation fruit collected per orchard. The new system, which involves inspecting a 100-fruit sample per orchard, was compared with the previous method. While the five-tree protocol tended to overestimate infestation, it remained effective. The sanitation-fruit sampling approach accurately reflected orchard-level infestation, with a 100-fruit sample sufficient for orchards as large as 20 hectares. Although random sampling is recommended, it was not essential for effectiveness. These results support the use of the new monitoring procedure in the systems approach for citrus exports for T. leucotreta risk mitigation. Full article

Cold atmospheric plasma (CAP) is a novel and versatile technology, which is not yet used in the food and agricultural sector for barley processing. In lab-scale applications, the technology shows potential in extending shelf life and ensuring food safety and quality, e.g., during storage. CAP reactive nature counteracts insect pests, fungi, and bacteria, but also improves seed germination and facilitates plant growth not only under stress conditions. Its generation does not require water, chemicals, or solvents and consumes little energy due to low operating temperatures (<60 °C) with a short time span that makes additional production steps (e.g., cooling) obsolete. Therefore, CAP is a sustainable technology capable of further optimising the use of limited resources with the potential of offering solutions for upcoming environmental challenges and political requirements for replacing existing practices and technologies due to the growing impact of climate change. This review summarises recent developments and findings concerning CAP application in barley production and processing with air as the process gas. Furthermore, this comprehensive overview could help identify further research needs to overcome its current technical limitations, e.g., efficiency, capacity, etc., that hamper the upscale and market introduction of this environmentally friendly technology. Full article

Weed and disease management in organic watermelon [Citrullus lanatus (Thunb.) Matsum. & Nakai] production is challenging. Yellow nutsedge (Cyperus esculentus L.) and Palmer amaranth (Amaranthus palmeri S. Wats.) are two competitor weeds in watermelon plasticulture production systems. Anaerobic soil disinfestation (ASD) is an emerging non-chemical approach to control weeds and soilborne plant pathogens, especially in organic farming. The effect of ASD treatments on weeds and soilborne diseases is being documented on different specialty crops. However, the impact of ASD treatments on the crop and crop genotypes; specifically watermelon has not been elucidated. Therefore, the impact of chicken manure and molasses (CMM)-induced ASD on twenty commercially available watermelon genotypes/rootstocks and major weed species was evaluated in a high tunnel experiment. The experiment was constructed as a randomized complete block design with three replications. The treatments consisted of a factorial of carbon source (1) non-treated check (CK), (2) CMM by twenty watermelon genotypes and rootstock. Soil treated with carbon CMM demonstrated significantly greater cumulative anaerobicity (246,963) activity relative to CK (575,372). Under anaerobic conditions, CMM achieved 91% weed control compared to CK. A lower number of yellow nutsedge (2) and Palmer amaranth (1) counts were recorded in CMM compared to CK (8) and (28), respectively. Among watermelon genotypes, ‘Extazy’, ‘Powerhouse’, ‘Sangria’, and ‘Exclamation’ had greater vigor 8.5, 8.4, 8.4, and 8.3, respectively, at 28 days after transplanting in CMM-treated soil. Greater watermelon plant fresh biomass was recorded in CMM-treated soil for ‘Extazy’ (434 g), ‘Powerhouse’ (409 g), ‘Exclamation’ (364 g), and ‘Sangria’ (360 g). This study demonstrated the variable response of watermelon genotypes to CMM-induced ASD and provides a guide for germplasm selection in organic watermelon production under field conditions. Full article

Anaerobic soil disinfestation (ASD) is a promising alternative to synthetic chemical-driven pest management methods facilitated by incorporating carbon sources into the soil, tarping the soil with plastic mulch, and irrigating to soil saturation. To evaluate the impact of ASD on southern root-knot nematode [Meloidogyne incognita (Kofoid & White), SRKN] and yellow nutsedge (Cyperus esculentus L.) management in organically grown sweetpotato, greenhouse studies were conducted. The treatments were structured as a factorial of two carbon amendments [chicken manure + molasses (CM + M), and no additional carbon (control)] by 20 sweetpotato genotypes with 4 replications using a randomized complete block design. The results suggest that the microcosms receiving the carbon amendment spent the most time under anaerobic conditions (<200 mvh). Planting of sweetpotato genotypes in CM + M-treated microcosms resulted in 60–90% and 56–92% suppression of soil population and egg reproduction of SRKN as compared to no additional carbon. The application of CM + M reduced overall weed cover by 79% relative to the control. Sweetpotatoes in CM + M-treated microcosms had significantly higher dry above-ground biomass (6.8 g) as compared to the control (3.6 g). The results of this study demonstrated that ASD has the potential to manage nematodes and weeds in organic sweetpotato production systems. Full article

A wide range of seed-borne and soil-borne plant pathogens belonging to various fungal and fungal-like species cause pre-emergence seed decay and post-emergence seedling blights of wheat and other small-grain cereal crops. To prevent the death of the seedlings, poor establishment and reduced stand of the crops, extensive crop rotations, planting good-quality seeds and seed treatments with fungicides are used on regular basis. This study is aimed at assessing the efficacy of pre-sowing seed treatments with cold atmospheric plasma for the disinfestation of winter wheat seed from economically important fungal and fungal-like pathogens. Uninoculated or surface-inoculated with Fusarium culmorum, Bipolaris sorokiniana or Pythium ultimum wheat seeds, the cultivar Madara was treated by cold plasma produced either by microwave torch (MW) or underwater diaphragm discharge (UW) with low power at very short treatment times, or remained untreated controls. As per the treatments, the seeds were sown in a ready-to-use growing medium comprising a mixture of light and dark moss peat (w:w) 90–95%, 5–10% perlite and 3–5 kg/m³ CaCO₃, having an electrical conductivity of 40 mS/m, pH (H₂O) of 5.5–6.5 and moisture content of 60–70%, filling in 250 × 250 × 70 mm aluminum flat seed trays (40 grains per tray, four trays per treatment). The plants were cultivated for 45 days in a growth chamber held at (20 ± 2) °C, set to a cycle of 8 h/night and 16 h/day under fluorescent light of 2000–3000 lux intensity. For each replicate, disease incidence (DI) was determined as the total percentage of missing, dead and apparently symptomatic plants. Seed treatment with a microwave plasma torch with a power of 16 W for 40 s significantly (p < 0.001) reduced seedling blights caused by F. culmorum, B. sorokiniana and P. ultimum by 46.8%, 51.0% and 77.3%, respectively, but limited the emergence of wheat seedlings by 15.9% on average. Simultaneously, the effectiveness of underwater discharge seed treatments reached an average of about a 60% reduction of seedling blight caused by F. culmorum and B. sorokiniana and about 37% of the disease caused by P. ultimum. Pre-sowing treatments with a MW plasma torch with an input power of 11 W and treatment time of 60, 90 or 120 s exposure also showed significant (p < 0.001) effects in controlling winter wheat seedling blights caused by the three pathogens. The effectiveness of the treatment increased with increasing the time period of exposure and reached full disease control (>80% reduction) for B. sorokiniana and P. ultimum seedling blights. This study demonstrated that pre-sowing treatment with a microwave plasma torch and underwater diaphragm discharge at a relatively low input power and short exposure time can be used for disinfestation and the effective control of seedling blights in winter wheat caused by seed-borne fungal pathogens, such as Fusarium culmorum and Bipolaris sorokiniana, and fungal-like oomycetes, such as Pythium ultimum. Full article

Uneven heating is the biggest obstacle to the application of radio frequency (RF) technology in insecticidal applications. Since many existing studies have focused on the RF heating uniformity of granular materials, few RF treatment solutions have been reported for leaf materials. To improve the RF heating uniformity of tobacco leaves, a combined RF-hot air treatment method was developed for disinfestation in this study. The experiments were conducted to determine the effects of three process parameters (electrode gap, sample thickness, and hot air temperature) on the RF heating rate and uniformity of tobacco leaves. The results showed that the heating rate of RF-hot air combined treatment increased with decreasing electrode gap but increased with increasing sample thickness and hot air temperature. The RF heating uniformity in tobacco leaves decreased with increasing heating rate but could be significantly improved with the conveyor movement. Considering the heating uniformity and heating rate, the material thickness of 60 mm and electrode gap of 110 mm were selected as optimal process parameters. The results of the study may provide a feasible method to improve the RF heating uniformity in tobacco leaves and potential applications for effective disinfestations. Full article

Weeds and nematodes are particularly problematic in organic sweetpotato production due to a lack of effective pesticides. Anaerobic soil disinfestation (ASD) has the potential to fit into current pest management practices as an alternative to pesticide application. Greenhouse studies were conducted at the Clemson Coastal Research and Education Center (CREC) in Charleston, SC, to investigate the impact of carbon source amendment and a no carbon source treatment, and soil type on cumulative anaerobicity, weed control, nematode population, and sweetpotato vigor. Microcosms were filled with one of three different soil types (Charleston—loamy/native; Blackville—high coarse sand content; and Clemson—high clay content) and were mixed with cottonseed meal (CSM) or no carbon amendment. The pots were then sealed with plastic totally impenetrable film (Tif) for 6 weeks, followed by the transplanting of sweetpotato (cv Bayou Belle) slips. The results suggested that the CSM-treated microcosms spent more time under anaerobic conditions than those treated with the no carbon amendment. The microcosms that experienced a longer duration of anaerobicity had a lower percent weed cover (49%), fewer nematode egg masses, and a lower gall index when compared to microcosms which experienced a shorter duration of anaerobicity. Significantly higher instances of leaf necrosis were observed in the sweetpotato slips sown in the CSM-treated microcosms. The addition of CSM as a carbon source to facilitate ASD resulted in similar above-ground biomasses of the sweetpotato plants compared to the treatments containing no carbon amendment. However, a significantly lower below-ground biomass of the sweetpotato plants was observed in the CSM-treated microcosms. Full article

Lettuce is the most cultivated leafy vegetable in Greece; however, due to the adopted intensive cropping system, its cultivation is susceptible to many soilborne pathogens that cause significant yield and quality losses. In the current study, the impact of various soil disinfestation methods such as solarization, chemical disinfestation, and application of a biofungicide were evaluated in a commercial field that has been repeatedly used for lettuce cultivation. The populations of soilborne pathogens Rhizoctonia solani, Pythium ultimum, Fusarium oxysporum, and Fusarium equiseti were measured via qPCR before and after the implementation of the specific disinfestation methods. Although all the tested methods significantly reduced the population of the four soilborne pathogens, soil solarization was the most effective one. In addition, solarization reduced the number of lettuce plants affected by the pathogens R. solani and F. equiseti, and at the same time, significantly influenced the growth of lettuce plants. Amplicon sequence analysis of 16S rRNA-encoding genes used to study the soil bacterial community structure showed that Firmicutes, Proteobacteria, and Actinobacteria were the predominant bacterial phyla in soil samples. In general, solarization had positive effects on Firmicutes and negative effects on Proteobacteria and Actinobacteria; soil fumigation with dazomet increased the relative abundance of Firmicutes and Proteobacteria and reduced the corresponding values of Actinobacteria; and biofungicide had no significant effects on the three predominant bacterial phyla. The bacterial community composition and structure varied after the application of the soil disinfestation treatments since they imposed changes in the α- and β-diversity levels. The results of this study are expected to contribute towards implementing the most effective control method against the most common soilborne pathogens in intensively cultivated fields, such as those cultivated with leafy vegetables. Full article

Cold treatment has been extensively employed for the phytosanitary control of fruit flies for citrus cultivation worldwide. Trials with artificial infestation methods on navel and Valencia oranges at 3 °C and 2 °C against the oriental fruit fly (Bactrocera dorsalis) were conducted, following standard bioassay protocols and large-scale testing. The results showed that the third instar larval stage was the most tolerant stage in both cultivars. The maximum estimated cold treatment time at 3 °C required to produce 99.9968% mortality (LT_99.9968) with a 95% confidence level was 16.6 days and 16.2 days for the navel orange and Valencia orange, respectively. Meanwhile, the estimated cold treatment time at 2 °C was 14.8 days for both navel and Valencia oranges, with a 95% confidence level. Furthermore, it was also observed that no survivors came from a total of 104,420 estimated (51,396 for the navel cultivar and 53,024 for the Valencia cultivar) third instar larvae in orange fruits after being subjected to a cold treatment of 3 °C for 17 days. Meanwhile, there were also no survivors from a total of 100,556 (50,740 for the navel cultivar and 49,816 for the Valencia cultivar) third instar larvae in orange fruits after being subjected to a cold treatment of 2 °C for 15 days. The treatments at 3 °C for 17 days and 2 °C for 15 days on oranges, including navel and Valencia, against the oriental fruit fly, surpassed the required mortality assurance of 99.9968% at a 95% confidence level and also met the probit-9 mortality standard. Overall, the application of these results will provide more flexibility for the citrus industry to satisfy quarantine treatment requirements. Full article

Soil disinfestation has been widely used as an effective strategy to improve soil health and crop yield by suppression of soil-borne plant pathogens, but its effect on soil organic carbon (SOC), a crucial factor linked to climate change, remains unknown. A microcosm trial was conducted to evaluate microbial residue carbon (MRC) and its contribution to SOC under chemical soil disinfestation (CSD) with quicklime (QL) and chloropicrin (CP), as well as anaerobic soil disinfestation (ASD) with maize straw (MASD) and soybean straw (SASD). The SOC concentrations were increased by both CSD and ASD. Also, total SOC-normalized MRC concentration was enhanced, with a considerable increase in soil bacterial and fungal MRC, particularly evident under CP and SASD treatment. Due to broad-spectrum biocidal activities, decreased SOC-normalized microbial biomass carbon (MBC) was consistent with the reductions in bacterial and fungal phospholipid fatty acids (PLFAs), consequently increasing MRC accumulation under CSD. Similarly, ASD decreased fungal PLFAs while shifting bacterial PLFAs from aerobic to anaerobic taxa or from gram-negative to -positive taxa, both of which contributed to both MBC and MRC buildup. Collectively, the findings demonstrate that ASD can efficiently increase SOC concentration, with distinct mechanisms underlying MRC generation when compared to traditional CSD. Full article

This paper outlines the numerical modeling procedure aimed at defining the guidelines for the development of a continuous microwave-assisted pilot plant for shelled almond disinfestation, as an alternative to the use of chemicals. To this end, a 3D Multiphysics numerical tool involving both electromagnetic and thermal models was developed to predict the temperature and electric field profiles inside the microwave treatment chamber. Three different microwave sources arrangements were simulated and the accuracy of the model was verified under different residence times of almonds in the treatment chamber using the developed prototype. The modeling results demonstrated that the arrangement having five microwave sources, each delivering a maximum power of 1.5 kW and frequency of 2.45 GHz, ensures good heating uniformity. The obtained results proved that the model enables the accurate prediction of the temperature trend (root-mean-square error/RMSE = 0.82). A strong linear regression was detected for the standard deviation between the simulated and experimental data (linear regression, R² = 0.91). The very low COV value for the experimental temperature data demonstrated the heating uniformity as the treatment time changed. The developed model and the simulation strategy used may provide useful design guidance for microwave-assisted continuous plants for disinfestation, with a significant impact on the almond industry. Full article