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Keywords = diethyl fumarate

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11 pages, 1502 KiB  
Article
Rapid and Efficient Synthesis of Succinated Thiol Compounds via Maleic Anhydride Derivatization
by Hiroshi Yamaguchi, Hikari Sugawa, Himeno Takahashi and Ryoji Nagai
Molecules 2025, 30(3), 571; https://doi.org/10.3390/molecules30030571 - 27 Jan 2025
Viewed by 1541
Abstract
Succination is a non-enzymatic post-translational modification of cysteine (Cys) residues, resulting in the formation of S-(2-succino)cysteine (2SC). While hundreds of 2SC-modified proteins have been identified and are associated with the dysfunction of proteins, the underlying molecular mechanisms remain poorly understood. Conventional methods [...] Read more.
Succination is a non-enzymatic post-translational modification of cysteine (Cys) residues, resulting in the formation of S-(2-succino)cysteine (2SC). While hundreds of 2SC-modified proteins have been identified and are associated with the dysfunction of proteins, the underlying molecular mechanisms remain poorly understood. Conventional methods for synthesizing succinated compounds, such as 2SC, often require prolonged reaction times and/or HCl hydrolysis. In this study, we present a rapid and efficient synthesis method for succinated compounds using maleic anhydride, enabling more effective in vivo studies of succination mechanisms. This method was tested on thiol compounds with varying molecular weights, including Cys derivatives, Cys-containing peptides, and reduced bovine serum albumin. By incubating these compounds in an aqueous buffer with maleic anhydride dissolved in an organic solvent like diethyl ether, we achieved significantly improved succination efficiency compared to conventional methods. The succination efficiency using maleic anhydride surpassed that of fumaric acid or maleic acid. Notably, this approach facilitated the succination of amino acids, peptides, and proteins within minutes at 25 °C, without requiring acid hydrolysis. Our findings provide a straightforward, time-efficient strategy for synthesizing succinated thiol compounds, offering a valuable tool to enhance the understanding of succination’s molecular mechanisms and its role in protein function and dysfunction. Full article
(This article belongs to the Special Issue 10th Anniversary of the Bioorganic Chemistry Section of Molecules)
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14 pages, 855 KiB  
Article
Biodegradation of Malathion in Amended Soil by Indigenous Novel Bacterial Consortia and Analysis of Degradation Pathway
by Mohd Ashraf Dar and Garima Kaushik
Soil Syst. 2023, 7(4), 81; https://doi.org/10.3390/soilsystems7040081 - 26 Sep 2023
Cited by 6 | Viewed by 3455
Abstract
The capabilities of pure bacterial strains and their consortia isolated from agricultural soil were evaluated during a bioremediation process of the organophosphate pesticide malathion. The pure bacterial strains efficiently degraded 50.16–68.47% of the pesticide within 15 days of incubation, and metabolites were observed [...] Read more.
The capabilities of pure bacterial strains and their consortia isolated from agricultural soil were evaluated during a bioremediation process of the organophosphate pesticide malathion. The pure bacterial strains efficiently degraded 50.16–68.47% of the pesticide within 15 days of incubation, and metabolites were observed to accumulate in the soil. The consortia of three bacterial species [Micrococcus aloeverae (MAGK3) + Bacillus cereus (AGB3) + Bacillus paramycoides (AGM5)] degraded the malathion more effectively, and complete malathion removal was observed by the 15th day in soils inoculated with that consortium. In contrast, the combined activity of any two of these strains was lower than the mixed consortium of all of the strains. Individual mixed consortia of Micrococcus aloeverae (MAGK3) + Bacillus cereus (AGB3); Micrococcus aloeverae (MAGK3) + Bacillus paramycoides (AGM5); and Bacillus cereus (AGB3) + Bacillus paramycoides (AGM5) caused 76.58%, 70.95%, and 88.61% malathion degradation in soil, respectively. Several intermediate metabolites like malaoxon, malathion monocarboxylic acid, diethyl fumarate, and trimethyl thiophosphate were found to accumulate and be successively degraded during the bioremediation process via GC–MS detection. Thus, inoculating with a highly potent bacterial consortium isolated from in situ soil may result in the most effective pesticide degradation to significantly relieve soils from pesticide residues, and could be considered a prospective approach for the degradation and detoxification of environments contaminated with malathion and other organophosphate pesticides. This study reports the use of a mixed culture of Indigenous bacterial species for successful malathion degradation. Full article
(This article belongs to the Special Issue Soil Pollution: Monitoring, Risk Assessment and Remediation)
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11 pages, 3204 KiB  
Article
Relaxation and Amorphous Structure of Polymers Containing Rigid Fumarate Segments
by Yasuhito Suzuki, Takahito Kano, Tsuyoshi Tomii, Nagisa Tsuji and Akikazu Matsumoto
Polymers 2022, 14(22), 4876; https://doi.org/10.3390/polym14224876 - 12 Nov 2022
Cited by 8 | Viewed by 3380
Abstract
The physical properties of polymers are significantly affected by relaxation processes. Recently, we reported that poly(diethyl fumarate) (PDEF) shows two thermal anomalies on DSC measurement, despite the fact that it is a homopolymer. We attribute these two relaxations α relaxation and β relaxation, [...] Read more.
The physical properties of polymers are significantly affected by relaxation processes. Recently, we reported that poly(diethyl fumarate) (PDEF) shows two thermal anomalies on DSC measurement, despite the fact that it is a homopolymer. We attribute these two relaxations α relaxation and β relaxation, respectively. In this study, we investigate the two relaxations of fumarate-containing polymers by DSC, solid-state NMR, and X-ray scattering. The two relaxations are present even in a copolymer of diethyl fumarate and ethyl acrylate with fumarate segments of 30%. We used poly(methyl methacrylate) (PMMA) as a model polymer for comparison, since there are detailed investigations of its dynamics and physical properties. Solid-state NMR indicates that the very local relaxation of poly(fumarate)s is not significantly different from that of PMMA. The tensile test showed that PDEF is still brittle at above β relaxation temperature and below α relaxation temperature. It was revealed that a structural anisotropy appeared when PDEF was extended at around α relaxation temperature. We discuss the effect of the glassy packing of the rigid polymer chain including the DEF segments on the strong β relaxation behavior. Our data provide insight into the microscopic mechanism of β relaxation of vinyl polymers. Full article
(This article belongs to the Section Polymer Chemistry)
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16 pages, 3069 KiB  
Article
Understanding the Reactivity of Trimethylsilyldiazoalkanes Participating in [3+2] Cycloaddition Reactions towards Diethylfumarate with a Molecular Electron Density Theory Perspective
by Luis R. Domingo, Nivedita Acharjee and Haydar A. Mohammad-Salim
Organics 2020, 1(1), 3-18; https://doi.org/10.3390/org1010002 - 16 Oct 2020
Cited by 19 | Viewed by 3932
Abstract
A Molecular Electron Density Theory (MEDT) study is presented here for [3+2] cycloaddition (32CA) reactions of three trimethylsilyldiazoalkanes with diethyl fumarate. The presence of silicon bonded to the carbon of these silyldiazoalkanes changes its structure and reactivity from a pseudomonoradical to that of [...] Read more.
A Molecular Electron Density Theory (MEDT) study is presented here for [3+2] cycloaddition (32CA) reactions of three trimethylsilyldiazoalkanes with diethyl fumarate. The presence of silicon bonded to the carbon of these silyldiazoalkanes changes its structure and reactivity from a pseudomonoradical to that of a zwitterionic one. A one-step mechanism is predicted for these polar zw-type 32CA reactions with activation enthalpies in CCl4 between 8.0 and 19.7 kcal·mol−1 at the MPWB1K (PCM)/6-311G(d,p) level of theory. The negative reaction Gibbs energies between −3.1 and −13.2 kcal·mole−1 in CCl4 suggests exergonic character, making the reactions irreversible. Analysis of the sequential changes in the bonding pattern along the reaction paths characterizes these zw-type 32CA reactions. The increase in nucleophilic character of the trimethylsilyldiazoalkanes makes these 32CA reactions more polar. Consequently, the activation enthalpies are decreased and the TSs require less energy cost. Non-covalent interactions at the TSs account for the stereoselectivity found in these 32CA reactions involving the bulky trimethylsilyl group. Full article
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12 pages, 1357 KiB  
Article
Effect of Prooxidative Natural Products: Comparison of the OSI1 (YKL071w) Promoter Luciferase Construct from Yeast with an Nrf2/Keap Reporter System
by Ivan Schlembach, Andreas Uebachs, Tim Caspers, Athanassios Fragoulis, Alan J. Slusarenko and Martin C. H. Gruhlke
Appl. Sci. 2020, 10(10), 3520; https://doi.org/10.3390/app10103520 - 20 May 2020
Cited by 1 | Viewed by 2857
Abstract
The oxidative stress response (OSR) in yeast is under the control of oxidation-sensitive cysteines in the Yap1p transcription factor, and fusion of the Yap1p-dependent OS-induced promoter of the YKL071w gene (OSI1) to a luciferase coding sequence makes a sensitive reporter for [...] Read more.
The oxidative stress response (OSR) in yeast is under the control of oxidation-sensitive cysteines in the Yap1p transcription factor, and fusion of the Yap1p-dependent OS-induced promoter of the YKL071w gene (OSI1) to a luciferase coding sequence makes a sensitive reporter for OS induced by electrophiles. In mammalian cells, the OSR induced by electrophiles is coordinated in a mechanistically similar way via oxidation-sensitive cysteines in the kelch-like ECH-associated protein 1 (Keap1)– nuclear factor erythroid 2-related factor 2 / antioxidant response element ( Nrf2/ARE) system. Many electrophilic oxidants have already been independently shown to trigger both the Yap1 and Keap1 systems. Here, we investigated the responses of Yap1 and Keap1 reporters to sulforaphane (SFN), allyl isothiocyanate (AITC), phenylethyl isothiocyanate (PEITC), previously known to stimulate Keap1–Nrf2/ARE but not known to activate Yap1, and as a positive control, allicin, previously reported to stimulate both Yap1 and Nrf2. We have compared the reciprocal responsiveness of the respective reporter systems and show that the yeast reporter system can have predictive value for electrophiles that stimulate the mammalian Keap1–Nrf2/ARE system. Full article
(This article belongs to the Section Applied Biosciences and Bioengineering)
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14 pages, 206 KiB  
Article
Facile Preparation of the Tosylhydrazone Derivatives of a Series of Racemic trans-3,4-Substituted Cyclopentanones
by Kamal H. Bouhadir, Bilal Abou Aleiwe and Fares A. Fares
Molecules 2012, 17(1), 1-14; https://doi.org/10.3390/molecules17010001 - 22 Dec 2011
Cited by 8 | Viewed by 8354
Abstract
We report the synthesis and characterization of a variety of trans-3,4-substituted cyclopentanones and the corresponding tosylhydrazone derivatives starting with diethyl fumarate. Protection of the keto group followed by selective monohydrolysis of esters was achieved, resulting in cyclopentanones with different substituents at positions [...] Read more.
We report the synthesis and characterization of a variety of trans-3,4-substituted cyclopentanones and the corresponding tosylhydrazone derivatives starting with diethyl fumarate. Protection of the keto group followed by selective monohydrolysis of esters was achieved, resulting in cyclopentanones with different substituents at positions 3 and 4. The tosylhydrazone derivative of each cyclopentanone intermediate was prepared in moderate to good yields. These compounds are potential precursors for functionalized methanofullerenes. Full article
(This article belongs to the Section Organic Chemistry)
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