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Keywords = cryptands

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18 pages, 3879 KB  
Article
Exploring Dacarbazine Complexation with a Cellobiose-Based Carrier: A Multimethod Theoretical, NMR, and Thermochemical Study
by Marta Hoelm, Zdzisław Kinart and Stanisław Porwański
Molecules 2025, 30(24), 4819; https://doi.org/10.3390/molecules30244819 - 18 Dec 2025
Viewed by 321
Abstract
Dacarbazine (DTIC) is a clinically important anticancer drug whose photosensitivity poses challenges for its stability and interactions with supramolecular hosts. Here, we investigate its complexation with the host 1,10-N,N′-bis-(β-D-ureidocellobiosyl)-4,7,13,16-tetraoxa-1,10-diazacyclooctadecane (TN), a hybrid urea–carbohydrate–diazacrown system, using combined experimental and computational approaches. While [...] Read more.
Dacarbazine (DTIC) is a clinically important anticancer drug whose photosensitivity poses challenges for its stability and interactions with supramolecular hosts. Here, we investigate its complexation with the host 1,10-N,N′-bis-(β-D-ureidocellobiosyl)-4,7,13,16-tetraoxa-1,10-diazacyclooctadecane (TN), a hybrid urea–carbohydrate–diazacrown system, using combined experimental and computational approaches. While TN has been studied as a host molecule, its specific interactions with DTIC and the associated thermodynamic characteristics had not been characterized. Computational results (obtained at the density functional theory level (DFT)) indicate that TN primarily forms non-inclusion complexes, with DTIC engaging in hydrogen bonding with sugar units, urea bridges, and diazacrown ether moieties. Experimental 1H NMR studies in D2O confirmed these interaction patterns, showing notable chemical shifts for sugar protons. Conductometric measurements between 293 and 313 K allowed for the determination of formation constants and thermodynamic parameters. The results demonstrate that TN:DTIC complexation is spontaneous, exothermic, and enthalpy-driven, accompanied by decreased system entropy. Comparison with previous studies on cyclodextrin complexes shows that TN forms strong associations with DTIC, owing to its abundant donor–acceptor groups, which facilitate extensive hydrogen-bonding networks. These findings provide new insights into DTIC stabilization and highlight TN’s potential as a multifunctional platform for drug delivery. Full article
(This article belongs to the Special Issue Alternative Routes for the Delivery of Drug Molecules)
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17 pages, 2137 KB  
Article
Grafting of Crown Ether and Cryptand Macrocycles on Large Pore Stellate Mesoporous Silica for Sodium Cation Extraction
by Paula Duenas-Ramirez, Caroline Bertagnolli, Robin Weiss, Joëlle Bizeau, Loïc Jierry, Philippe Choquet, Ariane Zaloszyc, Sylvie Bégin-Colin and Damien Mertz
Molecules 2023, 28(12), 4622; https://doi.org/10.3390/molecules28124622 - 7 Jun 2023
Cited by 2 | Viewed by 3432
Abstract
Regulation of the sodium cations level in the case of renal failure diseases is a very challenging task for clinicians, and new pollutant extractors based on nanomaterials are emerging as potential treatments. In this work, we report different strategies for the chemical functionalization [...] Read more.
Regulation of the sodium cations level in the case of renal failure diseases is a very challenging task for clinicians, and new pollutant extractors based on nanomaterials are emerging as potential treatments. In this work, we report different strategies for the chemical functionalization of biocompatible large pore mesoporous silica, denoted stellate mesoporous silica (STMS), with chelating ligands able to selectively capture sodium. We address efficient methods to covalently graft highly chelating macrocycles onto STMS NPs such as crown ethers (CE) and cryptands (C221) through complementary carbodiimidation reactions. Regarding sodium capture in water, C221 cryptand-grafted STMS showed better capture efficiency than CE-STMS due to higher sodium atom chelation in the cryptand cage (Na+ coverage of 15.5% vs. 3.7%). The sodium selectivity was hence tested with C221 cryptand-grafted STMS in a multi-element aqueous solution (metallic cations with the same concentration) and in a solution mimicking peritoneal dialysis solution. Results obtained indicate that C221 cryptand-grafted STMS are relevant nanomaterials to extract sodium cations in such media and allow us to regulate their levels. Full article
(This article belongs to the Special Issue Advanced Nanoscale Materials for Energy and Environment Applications)
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7 pages, 1539 KB  
Proceeding Paper
New 2,6-Bis(5-phenyloxazolyl)pyridine Ligands for Luminescent LnIII Complexes
by André Carvalho, Paula M. T. Ferreira and José A. Martins
Chem. Proc. 2022, 12(1), 56; https://doi.org/10.3390/ecsoc-26-13714 - 18 Nov 2022
Viewed by 2035
Abstract
Lanthanide (Ln(III)) luminescent complexes have been attracting interest for technological applications and molecular imaging. The luminescence of Ln(III)) ions is weak and depends on the use of light absorbing coordination ligands which sensitizes the lanthanide ion. A large variety of coordination ligands has [...] Read more.
Lanthanide (Ln(III)) luminescent complexes have been attracting interest for technological applications and molecular imaging. The luminescence of Ln(III)) ions is weak and depends on the use of light absorbing coordination ligands which sensitizes the lanthanide ion. A large variety of coordination ligands has been screened such as dipicolinates, oligo-pyridines, cyclen and crown ether derivatives, porphyrins, cryptands or calixarenes. In our research group we have developed an expeditious methodology to prepare bis(oxazolyl)pyridine ligands for LnIII from threonine and 2,6-pyridinedicarbonyl dichloride. In this work, two new pyridine-bis-oxazolyl ligands with an aromatic ring in position 5 of the oxazole ring were prepared from phenyl-serine and 2,6-pyridinedicarbonyl dichloride. The photophysical properties of compounds 1 and 2 were studied in acetonitrile and in Tris-HCl buffer (0.1 M, pH 7.1). These compounds were used for complexation with Eu(III) and/or Tb(III) ions and the photophysical properties of the complexes studied. Luminescence titrations with anhydrous EuCl3 and TbCl3 allowed the determination of the stoichiometry of the complexes and of the stability constants. Full article
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6 pages, 878 KB  
Short Note
6-(2′-(4″-Oxabutyloxy)phenyl)-1,6,11-triaza-3,9,14,17,22,25-hexaoxa-2(1,2)(4-methylbenzena)-10(1,2)(5-methylbenzena)bicyclo(9.8.8)heptacosaphane Sodium Bromide Dichloromethane
by Matthias Jochem, Dieter Schollmeyer and Heiner Detert
Molbank 2022, 2022(1), M1348; https://doi.org/10.3390/M1348 - 3 Mar 2022
Cited by 1 | Viewed by 2699
Abstract
Potassium ion sensors are important for the study of concentration profiles in tissues. The synthesis of a cryptand suited for potassium ions and the crystal structure of it with a chelated sodium ion are presented. Full article
(This article belongs to the Section Structure Determination)
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12 pages, 3415 KB  
Article
Stabilization of Near Identical Hydrogen Bonded Octameric Water Clusters in Crystal Structures of Three Distinct Non-Charged Polyamide Macrocyclic Host Molecules
by Kajetan Dąbrowa, Magdalena Ceborska and Janusz Jurczak
Molecules 2021, 26(9), 2787; https://doi.org/10.3390/molecules26092787 - 9 May 2021
Cited by 4 | Viewed by 2623
Abstract
In this paper, we present a comparative analysis of the solid state structures of three well-resolved hydrates of macrocyclic host molecules 1a, 1b, and 2 containing an intrannular amide-aryl substituent (lariat arm) connected to a fixed 26-membered ring in a normal [...] Read more.
In this paper, we present a comparative analysis of the solid state structures of three well-resolved hydrates of macrocyclic host molecules 1a, 1b, and 2 containing an intrannular amide-aryl substituent (lariat arm) connected to a fixed 26-membered ring in a normal (-NHCOAr, hosts 1a and 1b) or reverse manner (-CONHAr, host 2). Despite different chemical structures, these hosts crystallize as isostructural tetrahydrates in the same P-1 space group. Moreover, their crystals exhibit identical hydrogen bond motifs resulting in a stabilization of an almost identical unusual octameric water cluster built from the cyclic tetramer core and four water molecules, attached sequentially in an “up-and-down” manner. Further analysis reveals that, among the series, the structure of host 2 provides the most suitable environment for the accommodation of this type of water cluster. Full article
(This article belongs to the Special Issue Synthesis and Molecular Recognition of Macrocyclic Compounds)
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12 pages, 2503 KB  
Article
Cryptand-Functionalized Highly Oriented Pyrolytic Graphite Electrodes
by Marcos A. Bento, Sara Realista, Ana S. Viana, Ana M. Ferraria and Paulo N. Martinho
Sustainability 2021, 13(8), 4158; https://doi.org/10.3390/su13084158 - 8 Apr 2021
Cited by 6 | Viewed by 3435
Abstract
Reproducible materials that have detection properties towards a certain molecule are very important for applications in the fabrication of devices. Among all the substrates that are used, highly oriented pyrolytic graphite allows to clearly image a monolayer. On the other hand, cryptand molecules [...] Read more.
Reproducible materials that have detection properties towards a certain molecule are very important for applications in the fabrication of devices. Among all the substrates that are used, highly oriented pyrolytic graphite allows to clearly image a monolayer. On the other hand, cryptand molecules are versatile because they can sense certain analytes with high selectivity. The highly oriented pyrolytic graphite electrode was first functionalized with an aryl bearing a bromine or an alkyne group to further attach cryptand molecules to its surface. The functionalization was performed through the electroreduction of aryl diazonium salts. While functionalization with an aryl-bromine produced a 20 nm-thick dendritic layer, functionalization of the surface with an aryl bearing a terminal alkyne produced a 9.7 nm-thick multilayer. However, if the diazonium salt is prepared in situ, a 0.9 nm monolayer with aryl–alkyne groups is formed. The alkyne functionalized electrode reacted with a bromo-cryptand through a Sonogashira C–C coupling reaction yielding electrodes functionalized with cryptands. These were immersed in a solution of a Co(II) salt resulting in Co(II)-cryptate modified electrodes, highlighting the ability of the cryptands’ modified electrode to sense metal ions. The electrode surface was analyzed by X-ray photoelectron spectroscopy after each modification step, which confirmed the successful functionalization of the substrate with both the cryptand and the cryptate. Cyclic voltammetry studies showed stable current response after approximately six cycles. Different reduction processes were detected for both cryptand (−1.40 V vs. SCE) and cryptate (−1.22 V vs. SCE) modified highly oriented pyrolytic graphite. Full article
(This article belongs to the Special Issue Earth Abundant Transition Metals in Chemical Sensors and Actuators)
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14 pages, 4130 KB  
Article
Construction of Supramolecular Polymers with Different Topologies by Orthogonal Self-Assembly of Cryptand–Paraquat Recognition and Metal Coordination
by Kai Wang, Yuan-Guang Shao, Feng-Zhi Yan, Zibin Zhang and Shijun Li
Molecules 2021, 26(4), 952; https://doi.org/10.3390/molecules26040952 - 11 Feb 2021
Cited by 5 | Viewed by 3189
Abstract
Recently, metal-coordinated orthogonal self-assembly has been used as a feasible and efficient method in the construction of polymeric materials, which can also provide supramolecular self-assembly complexes with different topologies. Herein, a cryptand with a rigid pyridyl group on the third arm derived from [...] Read more.
Recently, metal-coordinated orthogonal self-assembly has been used as a feasible and efficient method in the construction of polymeric materials, which can also provide supramolecular self-assembly complexes with different topologies. Herein, a cryptand with a rigid pyridyl group on the third arm derived from BMP32C10 was synthesized. Through coordination-driven self-assembly with a bidentate organoplatinum(II) acceptor or tetradentate Pd(BF4)2•4CH3CN, a di-cryptand complex and tetra-cryptand complex were prepared, respectively. Subsequently, through the addition of a di-paraquat guest, linear and cross-linked supramolecular polymers were constructed through orthogonal self-assembly, respectively. By comparing their proton nuclear magnetic resonance (1H NMR) and diffusion-ordered spectroscopy (DOSY) spectra, it was found that the degrees of polymerization were dependent not only on the concentrations of the monomers but also on the topologies of the supramolecular polymers. Full article
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15 pages, 4876 KB  
Article
Synthesis, Structure and Supramolecular Properties of a Novel C3 Cryptand with Pyridine Units in the Bridges
by Cosmin Vasile Crişan, Albert Soran, Attila Bende, Niculina Daniela Hӑdade, Anamaria Terec and Ion Grosu
Molecules 2020, 25(17), 3789; https://doi.org/10.3390/molecules25173789 - 20 Aug 2020
Cited by 3 | Viewed by 4290
Abstract
The high-yield synthesis and the structural investigation of a new cryptand with C3 symmetry, exhibiting 2,4,6-triphenyl-1,3,5-triazine central units and pyridine-based bridges, are reported. The structure of the compound was investigated by single crystal X-ray diffractometry, NMR (nuclear magnetic resonance), HRMS (high resolution mass [...] Read more.
The high-yield synthesis and the structural investigation of a new cryptand with C3 symmetry, exhibiting 2,4,6-triphenyl-1,3,5-triazine central units and pyridine-based bridges, are reported. The structure of the compound was investigated by single crystal X-ray diffractometry, NMR (nuclear magnetic resonance), HRMS (high resolution mass spectrometry) measurements, and theoretical calculations. The study of supramolecular behavior in solid state revealed the association of cryptand molecules by C-H---π and π---π contacts. Moreover, theoretical calculations indicated the high binding affinity of the cryptand for various organic molecules as guests. Full article
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3 pages, 149 KB  
Editorial
Preface from the Guest Editor of Special Issue “Quantum-Chemical Modeling and Design of Chelate and Macrocyclic Metal Complexes”
by Oleg V. Mikhailov
Int. J. Mol. Sci. 2020, 21(7), 2339; https://doi.org/10.3390/ijms21072339 - 28 Mar 2020
Cited by 1 | Viewed by 2158
Abstract
As is known, in the last fifty years of coordination of inorganic and organo-elemental chemistry, chemical compounds formed by chelating or macrocyclic organic and organo-elemental ligands (in particular, crown ethers, cryptands, calixarenes, cucurbituryls, porphyrins, and their various derivatives) and ions of various p [...] Read more.
As is known, in the last fifty years of coordination of inorganic and organo-elemental chemistry, chemical compounds formed by chelating or macrocyclic organic and organo-elemental ligands (in particular, crown ethers, cryptands, calixarenes, cucurbituryls, porphyrins, and their various derivatives) and ions of various p-, d- and f-elements, have become of special interest [...] Full article
9 pages, 2035 KB  
Communication
Exploring High-Symmetry Lanthanide-Functionalized Polyoxopalladates as Building Blocks for Quantum Computing
by José J. Baldoví and Aleksandar Kondinski
Inorganics 2018, 6(4), 101; https://doi.org/10.3390/inorganics6040101 - 21 Sep 2018
Cited by 9 | Viewed by 5302
Abstract
The structural, electronic, and magnetochemical properties of the star-shaped polyoxopalladate [Pd15O10(SeO3)10]10− (POPd) and its lanthanide-functionalized derivatives have been investigated on the basis of density functional theory, followed by a ligand field analysis using the [...] Read more.
The structural, electronic, and magnetochemical properties of the star-shaped polyoxopalladate [Pd15O10(SeO3)10]10− (POPd) and its lanthanide-functionalized derivatives have been investigated on the basis of density functional theory, followed by a ligand field analysis using the Radial Effective Charge (REC) model. Our study predicts that heteroPOPd is a robust cryptand that enforces D5h symmetry around the encapsulated Ln3+ centers. This rigid coordination environment favors an interesting potential magnetic behavior in the Er and Ho derivatives, and the presence of a cavity in the structure suggests an effective insulation of the electronic system from the lattice phonons, which may be of interest for molecular spintronics and quantum computing applications. Full article
(This article belongs to the Special Issue Magnetic Lanthanide Complexes)
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11 pages, 2285 KB  
Communication
A Cryptand-Type Aluminum Tris(salophen) Complex: Synthesis, Characterization, and Cell Imaging Application
by Hao-Yan Yin, Jing Lai, Juan Tang, Yanli Shang and Jun-Long Zhang
Inorganics 2018, 6(1), 20; https://doi.org/10.3390/inorganics6010020 - 24 Jan 2018
Cited by 3 | Viewed by 5666
Abstract
Metal salen/salophen complexes have been used as fluorescent probes for cell imaging with various metal centers. Herein we synthesized cryptand-type aluminum salophen complexes LAl3 and the corresponding mononuclear compound LAl. X-ray crystal diffraction verifies the cryptand-type structure of LAl3 with C [...] Read more.
Metal salen/salophen complexes have been used as fluorescent probes for cell imaging with various metal centers. Herein we synthesized cryptand-type aluminum salophen complexes LAl3 and the corresponding mononuclear compound LAl. X-ray crystal diffraction verifies the cryptand-type structure of LAl3 with C3h symmetry. Both LAl3 and LAl show moderate green fluorescence with quantum yields of 0.17 and 0.05, respectively. The hydrophilic and cationic nature of these aluminum salophen complexes renders them enhanced cellular uptake. Both complexes are internalized into cells by energy-dependent pathways and they distribute in lysosomal organelles. Full article
(This article belongs to the Special Issue Schiff-Base Metal Complexes)
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65 pages, 21118 KB  
Letter
Organocatalysis: Fundamentals and Comparisons to Metal and Enzyme Catalysis
by Pierre Vogel, Yu-hong Lam, Adam Simon and Kendall N. Houk
Catalysts 2016, 6(9), 128; https://doi.org/10.3390/catal6090128 - 26 Aug 2016
Cited by 42 | Viewed by 23423
Abstract
Catalysis fulfills the promise that high-yielding chemical transformations will require little energy and produce no toxic waste. This message is carried by the study of the evolution of molecular catalysis of some of the most important reactions in organic chemistry. After reviewing the [...] Read more.
Catalysis fulfills the promise that high-yielding chemical transformations will require little energy and produce no toxic waste. This message is carried by the study of the evolution of molecular catalysis of some of the most important reactions in organic chemistry. After reviewing the conceptual underpinnings of catalysis, we discuss the applications of different catalysts according to the mechanism of the reactions that they catalyze, including acyl group transfers, nucleophilic additions and substitutions, and C–C bond forming reactions that employ umpolung by nucleophilic additions to C=O and C=C double bonds. We highlight the utility of a broad range of organocatalysts other than compounds based on proline, the cinchona alkaloids and binaphthyls, which have been abundantly reviewed elsewhere. The focus is on organocatalysts, although a few examples employing metal complexes and enzymes are also included due to their significance. Classical Brønsted acids have evolved into electrophilic hands, the fingers of which are hydrogen donors (like enzymes) or other electrophilic moieties. Classical Lewis base catalysts have evolved into tridimensional, chiral nucleophiles that are N- (e.g., tertiary amines), P- (e.g., tertiary phosphines) and C-nucleophiles (e.g., N-heterocyclic carbenes). Many efficient organocatalysts bear electrophilic and nucleophilic moieties that interact simultaneously or not with both the electrophilic and nucleophilic reactants. A detailed understanding of the reaction mechanisms permits the design of better catalysts. Their construction represents a molecular science in itself, suggesting that sooner or later chemists will not only imitate Nature but be able to catalyze a much wider range of reactions with high chemo-, regio-, stereo- and enantioselectivity. Man-made organocatalysts are much smaller, cheaper and more stable than enzymes. Full article
(This article belongs to the Special Issue Metal-free Organocatalysis)
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16 pages, 2370 KB  
Article
NMR Studies on Li+, Na+ and K+ Complexes of Orthoester Cryptand o-Me2-1.1.1
by René-Chris Brachvogel, Harald Maid and Max Von Delius
Int. J. Mol. Sci. 2015, 16(9), 20641-20656; https://doi.org/10.3390/ijms160920641 - 31 Aug 2015
Cited by 25 | Viewed by 12471
Abstract
Cryptands, a class of three-dimensional macrobicyclic hosts ideally suited for accommodating small guest ions, have played an important role in the early development of supramolecular chemistry. In contrast to related two-dimensional crown ethers, cryptands have so far only found limited applications, owing in [...] Read more.
Cryptands, a class of three-dimensional macrobicyclic hosts ideally suited for accommodating small guest ions, have played an important role in the early development of supramolecular chemistry. In contrast to related two-dimensional crown ethers, cryptands have so far only found limited applications, owing in large part to their relatively inefficient multistep synthesis. We have recently described a convenient one-pot, template synthesis of cryptands based on O,O,O-orthoesters acting as bridgeheads. Here we report variable-temperature, 1H-1D EXSY and titration NMR studies on lithium, sodium, and potassium complexes of one such cryptand (o-Me2-1.1.1). Our results indicate that lithium and sodium ions fit into the central cavity of the cryptand, resulting in a comparably high binding affinity and slow exchange with the bulk. The potassium ion binds instead in an exo fashion, resulting in relatively weak binding, associated with fast exchange kinetics. Collectively, these results indicate that orthoester cryptands such as o-Me2-1.1.1 exhibit thermodynamic and kinetic properties in between those typically found for classical crown ethers and cryptands and that future efforts should be directed towards increasing the binding constants. Full article
(This article belongs to the Special Issue Supramolecular Interactions)
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26 pages, 484 KB  
Article
Pd-Catalyzed Amination in the Synthesis of a New Family of Macropolycyclic Compounds Comprising Diazacrown Ether Moieties
by Alexei A. Yakushev, Nataliya M. Chernichenko, Maxim V. Anokhin, Alexei D. Averin, Alexei K. Buryak, Franck Denat and Irina P. Beletskaya
Molecules 2014, 19(1), 940-965; https://doi.org/10.3390/molecules19010940 - 15 Jan 2014
Cited by 15 | Viewed by 6357
Abstract
N,N'-bis(bromobenzyl) and N,N'-bis(halopyridinyl) derivatives of diaza-12-crown-4, diaza-15-crown-5 and diaza-18-crown-6 ethers were synthesized in high yields. The Pd-catalyzed macrocyclization reactions of these compounds were carried out using a variety of polyamines and oxadiamines were carried out to give [...] Read more.
N,N'-bis(bromobenzyl) and N,N'-bis(halopyridinyl) derivatives of diaza-12-crown-4, diaza-15-crown-5 and diaza-18-crown-6 ethers were synthesized in high yields. The Pd-catalyzed macrocyclization reactions of these compounds were carried out using a variety of polyamines and oxadiamines were carried out to give novel macrobicyclic and macrotricyclic compounds of the cryptand type. The dependence of the yields of macropolycycles on the nature of the starting diazacrown derivatives and polyamines was established. Generally N,N'-bis(3-bromobenzyl)-substituted diazacrown ethers and oxadiamines provided better yields of the target products. The highest yield of the macrobicyclic products reached 57%. Full article
(This article belongs to the Section Organic Chemistry)
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10 pages, 398 KB  
Article
Synthesis of a [2.2.2] Cryptand Containing Reactive Functional Groups
by Yousry M. A. Naguib
Molecules 2009, 14(9), 3600-3609; https://doi.org/10.3390/molecules14093600 - 15 Sep 2009
Cited by 3 | Viewed by 10520
Abstract
The functional group-containing potassium ionophore 195,245-dibromo-4,7,13,16,20,23-hexaoxa-1,10-diaza-19(1,2),24(1,2)-dibenzabicyclo[8.8.6]tetracosaphane has been synthesized. Full article
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