Search Results (511)

Ticks are hematophagous arthropods that parasitize livestock, humans, and wild animals, posing serious threats to public health worldwide. Diverse pathogens have been discovered in ticks, including viruses, bacteria, protozoa, and filarial nematodes; however, ticks also harbor a variety of fungal microbes, which remain largely unexplored. In this study, we isolated and identified culturable fungi associated with ticks collected on cattle and goats in Yunnan Province, China. Of the 1730 ticks obtained, 1690 were identified as Rhipicephalus microplus, and only 40 as Haemaphysalis longicornis via morphology and 16S rRNA gene analysis. A total of 90 fungal strains were isolated from the ticks and identified by morphological examination and ITS sequencing, representing 25 species across 20 genera, with Fusarium being the most prevalent. Among these isolates, Fusarium verticillioides (19 isolates) poses a threat to grains, animals, and humans; Cladosporium cladosporioides (six isolates) and Sarocladium zeae (one isolate) are primarily pathogenic to plants, while Schizophyllum commune (eight isolates), Rhizopus arrhizus (two isolates), Diaporthe phaseolorum (two isolates), and Purpureocillium lilacinum (two isolates) are recognized animal-associated pathogens. The diversity of isolated fungi with documented pathogenicity suggests that ticks may serve as potential vectors for fungal transmission, raising concerns about their role in cross-kingdom disease spread across agriculture and livestock. Furthermore, fungi with entomopathogenic potential, such as P. lilacinum, offer valuable resources for developing biocontrol agents against ticks. Our findings highlight the dual role of ticks as both potential vectors of phytopathogenic fungi and reservoirs of entomopathogenic biocontrol agents. This necessitates a paradigm shift in tick surveillance, integrating mycological monitoring to mitigate agricultural losses and exploring tick-borne fungi for sustainable vector control strategies. Full article

The occurrence of viral zoonotic spillover (the transmission of viruses from animals to humans) has attracted worldwide attention due to mounting concerns regarding viral threats such as avian influenza, Hendra, monkeypox, Nipah and bat coronaviruses. It is evident that these events deviate significantly from natural occurrences, being the conflation of ecological, environmental and social factors that are profoundly altering the boundaries between the animal and human domains. Consequently, in order to comprehend both the contemporary and prospective drivers of zoonotic viral spillover, a coordinated, comprehensive global One Health response is essential. The purpose of the present review is to analyze prevailing pathways of transmission between animal reservoirs and human populations. This examination involves the analysis of historical cases, including those of SARS and Ebola, as well as recent occurrences, such as the global pandemic of SARS-CoV-2 (COVID-19). A secondary objective of this review is to comprehend the fundamental mechanisms of cross-species transmission. The development of effective strategies to mitigate the emergence of zoonotic viruses and prevent future pandemics is contingent on a robust understanding of these mechanisms. This analysis is key to identifying pandemic pathogens and preventing the spread of zoonotic viruses. In conclusion, the review provides a thorough evaluation of current global strategies to prevent the spread of zoonotic viruses, highlighting gaps in our understanding and areas for further research. Full article

Highly pathogenic avian influenza H5N1 virus (H5N1 HPAIV) has long circulated in wild waterfowl and poultry and continues to cross species barriers, posing sustained threats to livestock productivity and public health. The 2024 outbreak of H5N1 HPAIV in dairy cattle across multiple U.S. states represents the first recognized large-scale transmission event of this virus in ruminants, reshaping our understanding of its host range and transmission ecology. This review summarizes recent advances in the epidemiology, virological characteristics, transmission, pathogenesis, surveillance, and control of dairy cattle-associated H5N1. The initial multistate outbreak was dominated by clade 2.3.4.4b genotype B3.13, whereas subsequent independent introductions of genotype D1.1 demonstrated that repeated avian-to-cattle spillover also contributes to the evolving outbreak ecology. A defining feature is efficient replication in bovine mammary epithelial cells, resulting in high viral titers in milk, supporting milk-associated exposure and milking-related contamination as plausible components of transmission, although the relative contribution of different routes remains unresolved. Infected cattle typically show reduced feed intake, a marked decline in milk production, abnormal milk, and mild systemic signs, whereas severe respiratory disease and mortality are uncommon. Mutations such as PB2-M631L, PA-K497R, and changes in NP and NS1 may promote replication and immune evasion in bovine cells, while genotype-specific PB2 adaptations highlight the potential for further mammalian adaptation. Human infections reported to date have been predominantly mild and associated with occupational exposure, with no evidence of sustained human-to-human transmission. Experimental vaccine studies have begun to demonstrate immunogenicity in cattle, although protection against mammary infection, viral shedding, and transmission remains to be established. Future priorities include clarifying mammary tropism and transmission dynamics, while strengthening diagnostics, farm biosecurity, vaccination, evaluating cattle vaccination strategies, and integrated One Health surveillance. Full article

Raccoon dog and fox amdoparvovirus (RFAV) has been reported in raccoon dogs and foxes, but natural infection in domestic dogs has not previously been documented. During March–April 2026, samples from four affected Dobermann dogs from a kennel near Novi Sad, Serbia, were submitted for laboratory investigation. After negative testing for canine adenovirus, canine coronavirus, herpesvirus, parvovirus, distemper virus, influenza A virus, and leptospirosis, metagenomic sequencing was performed on selected tissues, followed by bioinformatic analysis and targeted RFAV PCR screening of additional outbreak-associated samples. Affected dogs had prolonged illness characterized by conjunctivitis with ocular and nasal discharge, occasional blue eye appearance, progressive weight loss, poor coat quality, jaundice and biochemical evidence of hepatic injury, and neurologic signs including paraplegia in advanced cases. Sequencing generated 434,220 reads and identified multiple RFAV hits; pooled assembly produced a 4799 bp consensus genome with approximately 97% similarity to known RFAV strains and genome organization consistent with the genus Amdoparvovirus. RFAV DNA was subsequently detected by virus-specific PCR in an epidemiologically linked dog and across diverse specimen types including blood, urine, kidney, spleen, brain, lung, testicle, ileocecal lymph node, and throat swabs, whereas clinically healthy unrelated dogs were PCR-negative. Full article

Plant-based traditional medicine underpins primary health care across rural areas, yet its long-term continuity depends on both the transmission of local knowledge and the management of the plant resources that sustain this practice. This study aimed to identify medicinal plant species in Colcamar district (Amazonas, Peru) that combine high cultural importance with deficient reported environmental management, using a sustainability-oriented cultural–environmental prioritisation index. An observational, analytical cross-sectional study was conducted in five annexes of Colcamar district. Household heads and traditional medicine practitioners (n = 87) were interviewed during a single ethnobotanical field campaign in 2025, generating 1038 plant-informant records for 102 species with taxonomic identification and at least one valid plant-informant record. Cultural importance was estimated using the relative frequency of citation (RFC). Environmental management was assessed using a custom instrument of 11 indicators evaluated through exploratory factor analysis, Cronbach’s alpha, and intraclass correlation by informant. The factor analysis yielded a two-factor solution (KMO = 0.786; 50.6% of variance explained): socio-economic valuation and environmental management. Internal consistency was acceptable for the total scale (alpha = 0.826) and for each retained factor (alpha ≥ 0.85). Three indicators with intraclass correlation below 0.10 (source of acquisition, cultivation technique, and agroecosystem practices) varied across species and were used to build the environmental management index (EMI). Hierba santa (Cestrum auriculatum Lindl.) showed the highest cultural importance (RFC = 0.540), whereas pava (Petiveria alliacea L.) showed the lowest environmental management (EMI = 0.250), defining priority groups for management intervention. Exploratory regression suggested an unconfirmed trend towards higher socio-economic valuation among expert informants, although this finding should be interpreted cautiously because the global model was not statistically significant and only seven informants were classified as experts. The index should be interpreted as a sustainability-oriented prioritisation tool rather than as a direct ecological estimate of population status, regeneration, or harvesting pressure. Full article

The completion of this Special Issue, “Coronaviruses and Influenza Viruses: Evolution, Cross-Species Transmission, and Recombination”, offers a valuable opportunity to reflect on the remarkable scientific progress in understanding two of the most critical groups of emerging and re-emerging viral pathogens that affect both human and animal health [...] Full article

Both Chicken anemia virus (CAV) and Gyrovirus galga 1 (GyVg1) belong to the family Anelloviridae and genus Gyrovirus. They are non-enveloped, single-stranded circular DNA viruses that can infect chicken populations, leading to similar clinical symptoms such as growth retardation and immunosuppression, making clinical differentiation challenging. This study established a duplex TaqMan real-time PCR assay to simultaneously detect CAV and GyVg1. Specific primers and probes were developed to target the VP3 gene of CAV (labeled with VIC) and the VP1 gene of GyVg1 (labeled with FAM). The optimization process involved fine-tuning reaction conditions, such as primer/probe concentrations and annealing temperature, through a systematic matrix approach. The assay demonstrated remarkable linearity under optimized conditions (0.4 μmol/L primers, 0.2 μmol/L probes, and an annealing temperature of 52 °C), yielding high R² values of 0.9973 for CAV and 0.9981 for GyVg1. The method exhibited high specificity, showing no cross-reactivity with other common avian pathogens. The limits of detection were 1.0 × 10⁰ copies/μL for CAV and 1.0 × 10¹ copies/μL for GyVg1, making it 10-fold more sensitive than conventional PCR. Intra-assay and inter-assay coefficients of variation were below 1.5% and 2.5%, respectively, indicating excellent reproducibility. When tested on 411 clinical samples from Shandong Province, CAV showed a positivity rate of 48.66% (200/411), GyVg1 18.73% (77/411), and a co-detection rate of 17.52% (72/411). Moreover, 25 complete genome sequences of GyVg1 (2376 bp each) were acquired from positive samples. These sequences exhibited a nucleotide identity ranging from 93.6% to 99.3% among the isolates and 92.2% to 99.6% with reference strains. The phylogenetic analysis, which was based on whole-genome sequences, categorized the Shandong isolates into four clusters (I–IV). Notably, the strains were dispersed across these clusters and were intertwined with references from various regions and hosts. This observation suggests the absence of distinct geographic clustering and implies frequent cross-regional and cross-species transmission. In summary, this duplex real-time PCR assay offers a sensitive, specific, and dependable method for concurrently detecting and distinguishing CAV and GyVg1. The study’s findings reveal a significant co-infection rate and genetic variation in GyVg1, underscoring the importance of increased surveillance and deeper exploration of its pathogenicity and transmission patterns. Full article

Antimicrobial resistance (AMR) is a major One Health challenge driven by antimicrobial misuse in human medicine, veterinary practice, animal production, and polluted environments. Migratory birds move among wetlands, farms, wastewater-affected habitats, landfills, and coastal ecosystems and may acquire and redistribute antimicrobial-resistant bacteria (ARB) and antimicrobial resistance genes (ARGs) across ecological and political boundaries. This perspective synthesizes evidence on exposure sources, bacterial reservoirs, resistance determinants, cross-species interfaces, and surveillance priorities while explicitly distinguishing four claims: detection or carriage, persistence in individual birds, redistribution along migratory routes, and onward transmission to recipient hosts or environments. Published studies report multidrug-resistant Escherichia coli, Klebsiella pneumoniae, Salmonella spp., Enterococcus spp., and Campylobacter spp., with determinants including blaCTX-M, blaTEM, blaNDM, mcr, tet, sul, and qnr genes. The eight evidence groups summarized here constitute an illustrative, non-comprehensive selection; they are predominantly observational surveys or screenings, and none reconstructs a complete source–bird–destination–recipient transmission chain. Taxon-specific ecology modifies exposure: gulls and storks frequently exploit refuse and wastewater, waterfowl and shorebirds connect aquatic habitats, whereas passerines often reflect more local point-source contamination. Current evidence therefore supports migratory birds primarily as mobile sentinels and opportunistic carriers of anthropogenic AMR, while acknowledging possible natural or ancestral resistance in avian-associated microbiota. Future surveillance should combine longitudinal sampling, baseline cohorts such as pre-migratory nestlings, paired bird–water–soil–sediment sampling, whole-genome sequencing, plasmid profiling, telemetry, environmental DNA, wastewater-based epidemiology, and interoperable veterinary reporting. Practical mitigation requires antimicrobial stewardship, wastewater and landfill control, farm biosecurity, and coordinated veterinary, environmental, and public-health action. Full article

The widespread circulation of the Anopheles vector is observed during the rainy season and clearly decreases during the dry season, when only a few mosquitoes are able to survive. This study aimed to identify the major species sustaining continued malaria transmission across seasons. This cross-sectional study was conducted in a malaria-endemic area. Mosquitoes were captured in Faladie using pyrethroid spray catches during rainy and dry seasons. The collected mosquitoes were identified using morphological keys, combined with molecular techniques such as PCR-RFLP (IGS regions) for Anopheles (An.) gambiae s.l. identification. Plasmodium spp. positivity in each mosquito was characterized by qPCR using parasite 18 S genes. A total of 1082 and 1705 mosquitoes were captured inside the same houses in the rainy and dry seasons, respectively. In the rainy season, 454 (41.9%) were Anopheles, 624 (57.7%) Culex and 4 (0.4%) Aedes. During the dry season, 65 (3.81%) mosquitoes were Anopheles, while 1,640 (96.19%) were Culex. Morphologically, the anopheline population consisted of 100% An. gambiae s.l. The Anopheles species diversity in the rainy season comprised the sister taxa, An. gambiae s.s. and An. Coluzzii, followed by an An. gambiae/An. coluzzii hybrid and An. arabiensis. However, An. coluzzii was found as the only vector across the rainy and dry seasons that sustained malaria transmission. Plasmodium falciparum infection rates were 9.7% and 1.7%, respectively, for the rainy and dry seasons. An. coluzzii species can survive both the dry and the rainy seasons and sustain malaria through cross-seasonal transmission. This highlights the importance of tackling An. coluzzii species and residual malaria transmission to eradicate the disease in endemic areas. Full article

Gastrointestinal (GI) parasitic infections are still a major concern for cattle health and productivity in tropical and subtropical regions. However, epidemiological data on GI parasitism in cattle from western Thailand remain limited, particularly in border areas with frequent animal movement. This study focuses on establishing the prevalence of gastrointestinal parasitic infections and identifies its related risk factors among the cattle in Kanchanaburi province, western Thailand. Cross-sectional study was performed from December 2022 to January 2023 involving 153 cattle from the following three study populations: local cattle from Thong Pha Phum district, Sangkhlaburi district, and cross-border cattle imported from Myanmar. Fecal samples were examined using both simple flotation and formalin-ethyl acetate sedimentation techniques, and data on animal and management factors were collected through questionnaire surveys. Overall, 35.9% (55/153) of the cattle had at least one GI parasite species positive. Six parasite taxa were identified, with Strongyle-type nematodes being the most frequently detected (26.1%), followed by other helminth parasites. The prevalence of infection and parasite diversity increased progressively in cattle populations located closer to the Thai–Myanmar border, suggesting that this region may represent a potential hotspot for GI parasite transmission. From a One Health perspective, these findings highlight the potential for some helminths to circulate across animal, human, and environmental interfaces. The presence of 1.3% for both Capillaria spp., Trichuris spp. and 0.7% of Fasciola spp. suggests possible zoonotic transmission pathways, particularly via the fecal-oral route. Although 93.5% of cattle had reportedly received anthelmintic treatment, no apparent protective effect was observed. These findings highlight that the Thai–Myanmar border acts as a hotspot for parasite transmission and the need for improved parasite control strategies in this region, alongside integrated One Health surveillance linking animal, human, and environmental health in this cross-border region. Full article

Nano- (NPs, <1 µm) and microplastics (MPs, 1 µm–5 mm) are ubiquitous contaminants whose toxicity to invertebrates carries implications at the individual scale and (although not yet quantitatively validated) at the population scale. This semi-systematic narrative review organizes available evidence within an adverse outcome pathway (AOP) framework, linking primary molecular initiating events (MIEs) to adverse outcomes while flagging evidence strength at each step. It involves a structured synthesis that applies selected PRISMA 2020 transparency principles, namely disclosed databases, a priori eligibility criteria, and explicit harvest and de-duplication counts, but does not attempt the exhaustive paired screening, formal risk-of-bias scoring, or quantitative meta-analysis of a full systematic review; this design was chosen because the marked heterogeneity of particle physicochemistry, exposure regimes, and endpoint metrics across the available literature makes pooled statistical synthesis premature. Evidence is appraised across Daphnia, Artemia, Chironomus, Caenorhabditis elegans, Eisenia, marine mollusks, and crustaceans. Polymer chemistry, size, surface charge, weathering, biofilm formation, additives, and adsorbed co-contaminants shape uptake and downstream toxicity. Reactive oxygen species, mitochondrial dysfunction, lysosomal destabilization, and ER stress recur as coupled key events downstream of four MIEs (direct membrane interaction, protein corona formation, surface-catalyzed redox chemistry, and Trojan horse delivery). Multi-omics datasets converge on dysregulated stress, repair, apoptotic, immune, and inflammatory programs; epigenetic marks are increasingly considered as substrates for persistent and potentially heritable toxicity, although stable transgenerational transmission remains poorly demonstrated. The review delivers (i) an AOP map with evidence-strength annotations (strong, moderate, emerging), (ii) a structured cross-study synthesis comparing NP and MP effect profiles, and (iii) a critical layer that reinterprets biphasic and apparently contradictory data as mechanistically informative once particle physicochemistry and tissue context are resolved. Progress will depend on standardized characterization, environmentally realistic mixtures, and AOP-anchored designs that distinguish experimentally demonstrated mechanisms from inferred mechanisms and theoretical extrapolations. Full article

In 2025, a severe mass mortality outbreak struck captive Geochelone sulcata at a zoo in Guangdong Province, China. To trace the causative agent, identify the viral strain and characterize associated pathological lesions, respiratory tract samples collected from diseased tortoises were subjected to a combined technical workflow. Metagenomic high-throughput sequencing was first applied to screen for potential pathogens, followed by virus isolation via cell culture. Transmission electron microscopy (TEM) was used to observe viral morphology. The major capsid protein (MCP) gene was amplified by PCR for molecular identification, and whole-genome sequencing together with phylogenetic analysis was performed to clarify the genetic features of the isolate. The results verified that ranavirus was the primary pathogen responsible for the mortality. Pathological examination demonstrated acute necrosis, hemorrhage and inflammatory infiltration in multiple organs including the liver, spleen, lung, and pancreas. TEM observation revealed typical iridovirus-like particles with an average diameter of approximately 70 nm. Molecular and genomic analyses confirmed the pathogen as Tiger Frog Virus (TFV) of the genus Ranavirus, designated TFV-CN2025, which shared 99.8% nucleotide sequence homology with known TFV reference strains. To our knowledge, this is the first report of lethal TFV infection in G. sulcata, which provides detailed pathological evidence for this cross-species transmission event from amphibian hosts to terrestrial chelonians. Our findings indicate that TFV poses considerable risks to the tortoise breeding industry and ecological security in China. We therefore suggest incorporating TFV detection into routine quarantine and disease surveillance programs for captive tortoises. Full article

Rotaviruses (RVs) are important pathogens which induce gastroenteritis in different kinds of animals, including mammals and birds. Rotaviruses are divided into nine species (RVA-RVD and RVF-RVJ), and RVA-RVC and RVH can infect both humans and pigs. It is vital to understand the genetic diversity and evolution of porcine rotavirus (PoRV) for effective prevention and control of this disease. In this study, 5320 intestinal tissue samples and fecal swabs were collected from different pig farms in Guangxi Province, southern China, from 2022 to 2025. These samples were tested for PoRV species A (PoRVA), PoRVB, PoRVC, and PoRVH using the multiplex RT-qPCR. The positive samples of PoRVA were further selected to amplify and analyze the VP4, VP6, and VP7 gene sequences. The phylogenetic trees were constructed based on the PoRVA VP4, VP6, and VP7 gene sequences. Bayesian time-dynamic analysis and recombination analysis were performed for the PoRVA VP4 gene. The results indicated that the PoRVA, PoRVB, PoRVC, and PoRVH positivity rates were 16.92% (900/5320), 0.51% (27/5320), 12.71% (676/5320), and 6.22% (331/5320), respectively. Fifty-two VP4, VP6, and VP7 gene sequences were obtained from the 52 selected PoRVA-positive clinical samples. The nucleotide and amino acid identity analysis of the obtained PoRVA VP4, VP6, and VP7 genes indicated that the genetic diversity of the VP4 gene was higher than that of the VP6 and VP7 genes. The phylogenetic trees based on the VP4, VP6, and VP7 genes revealed that the predominant strains of PoRVA in Guangxi Province were the G9P[13]I5 genotype. Bayesian analysis indicated that the population size of PoRVA kept steady with no significant expansion from its discovery in the 1970s to approximately 2016, then exhibited gradual growth. Sequence analysis of the PoRVA VP4 gene revealed substitutions and recombination in the PoRVA strains, and one strain was derived from recombination of a porcine-originating strain and a human-originating strain. This study provided useful information on the molecular characteristics and genetic diversity of PoRVA and supplied important clues for in-depth research on the cross-species transmission of PoRVA. Full article

The emergence of swine acute diarrhea syndrome coronavirus (SADS-CoV), an alpha-coronavirus that causes fatal enteric disease in neonatal piglets with mortality rates up to 90%, demonstrates that bat-origin coronavirus has expanded its host range to pigs. Although SADS-CoV exhibits significant pandemic potential and capacity for cross-species transmission, the replication mechanisms of SADS-CoV remain largely unexplored. Identifying host factors responsible for SADS-CoV replication and elucidating its underlying mechanisms is essential for advancing fundamental knowledge of coronavirus biology and developing antiviral therapies. Here, we identified PABPC1 as a novel interactor of the SADS-CoV nucleocapsid (N) protein. Overexpression of PABPC1 restricted SADS-CoV infection, whereas knockdown of PABPC1 enhanced viral replication. Further study indicated PABPC1 as a host restriction factor of SADS-CoV in a manner dependent on its PABC domain. Mechanistically, PABPC1 enhances the ubiquitination of the N protein, therefore facilitating its recognition by the cargo receptor TOLLIP for selective autophagic degradation. This study systematically analyzes the interaction of host factors and the SADS-CoV N protein and identifies PABPC1 as a host restriction factor that limits viral replication via TOLLIP-mediated selective autophagy degradation of the N protein. These findings expand our knowledge of the SADS-CoV replication mechanism and provide additional antiviral strategies for controlling SADS-CoV. Full article

Q fever, caused by Coxiella burnetii, remains an important zoonotic disease with significant implications for animal health, livestock production, and public health. Epidemiological data regarding the circulation of C. burnetii in Romania remain limited, particularly in the western region of the country. This study aimed to assess the observed seropositivity and geographic distribution of anti-C. burnetii antibodies among sampled small ruminants from Western Romania. A cross-sectional sero-epidemiological survey was conducted using 546 serum samples collected from sheep (n = 451) and goats (n = 95) originating from five counties (Timiș, Arad, Bihor, Caraș-Severin, and Hunedoara). Sera were tested for IgG antibodies against C. burnetii using a commercial indirect enzyme-linked immunosorbent assay (ELISA). Overall, 87 animals were seropositive, corresponding to an observed seropositivity of 15.9% (87/546). Species-specific seropositivity was significantly higher in goats (25.3%) than in sheep (14.0%) (p = 0.006). Seropositive animals were detected in all surveyed counties, with prevalence ranging from 5.1% in Arad County to 21.3% in Timiș County. Significant geographic variation in seroprevalence was also observed among the investigated counties (p = 0.040). These findings indicate widespread serological evidence of exposure to Coxiella burnetii among the sampled small-ruminant population in Western Romania and reveal heterogeneous exposure patterns associated with both host species and geographic location. Continued surveillance integrating serological and molecular approaches is warranted to better characterize the epidemiology and transmission dynamics of C. burnetii within a One Health framework. Full article