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Keywords = chromate reductase gene

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25 pages, 3789 KiB  
Article
Rhizobium’s Reductase for Chromium Detoxification, Heavy Metal Resistance, and Artificial Neural Network-Based Predictive Modeling
by Mohammad Oves, Majed Ahmed Al-Shaeri, Huda A. Qari and Mohd Shahnawaz Khan
Catalysts 2025, 15(8), 726; https://doi.org/10.3390/catal15080726 - 30 Jul 2025
Viewed by 259
Abstract
This study analyzed the heavy metal tolerance and chromium reduction and the potential of plant growth to promote Rhizobium sp. OS-1. By genetic makeup, the Rhizobium strain is nitrogen-fixing and phosphate-solubilizing in metal-contaminated agricultural soil. Among the Rhizobium group, bacterial strain OS-1 showed [...] Read more.
This study analyzed the heavy metal tolerance and chromium reduction and the potential of plant growth to promote Rhizobium sp. OS-1. By genetic makeup, the Rhizobium strain is nitrogen-fixing and phosphate-solubilizing in metal-contaminated agricultural soil. Among the Rhizobium group, bacterial strain OS-1 showed a significant tolerance to heavy metals, particularly chromium (900 µg/mL), zinc (700 µg/mL), and copper. In the initial investigation, the bacteria strains were morphologically short-rod, Gram-negative, appeared as light pink colonies on media plates, and were biochemically positive for catalase reaction and the ability to ferment glucose, sucrose, and mannitol. Further, bacterial genomic DNA was isolated and amplified with the 16SrRNA gene and sequencing; the obtained 16S rRNA sequence achieved accession no. HE663761.1 from the NCBI GenBank, and it was confirmed that the strain belongs to the Rhizobium genus by phylogenetic analysis. The strain’s performance was best for high hexavalent chromium [Cr(VI)] reduction at 7–8 pH and a temperature of 30 °C, resulting in a total decrease in 96 h. Additionally, the adsorption isotherm Freundlich and Langmuir models fit best for this study, revealing a large biosorption capacity, with Cr(VI) having the highest affinity. Further bacterial chromium reduction was confirmed by an enzymatic test of nitro reductase and chromate reductase activity in bacterial extract. Further, from the metal biosorption study, an Artificial Neural Network (ANN) model was built to assess the metal reduction capability, considering the variables of pH, temperature, incubation duration, and initial metal concentration. The model attained an excellent expected accuracy (R2 > 0.90). With these features, this bacterial strain is excellent for bioremediation and use for industrial purposes and agricultural sustainability in metal-contaminated agricultural fields. Full article
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20 pages, 3343 KiB  
Article
Single-Chamber Microbial Fuel Cell with an Innovative Sensing Component for Real-Time Continual Monitoring of a Wide Range of Cr(VI) Concentrations in Wastewater
by Guey-Horng Wang, Jong-Tar Kuo, Chiu-Yu Cheng and Ying-Chien Chung
Biosensors 2025, 15(3), 158; https://doi.org/10.3390/bios15030158 - 3 Mar 2025
Viewed by 933
Abstract
Hexavalent chromium (Cr(VI)) is toxic, carcinogenic, and harmful to biological systems. Common detection methods, such as colorimetry, atomic absorption spectrometry, ion chromatography, and biological systems, can only be used in the laboratory and do not provide real-time feedback. To address these limitations, the [...] Read more.
Hexavalent chromium (Cr(VI)) is toxic, carcinogenic, and harmful to biological systems. Common detection methods, such as colorimetry, atomic absorption spectrometry, ion chromatography, and biological systems, can only be used in the laboratory and do not provide real-time feedback. To address these limitations, the current study cloned the ChrB gene, which exhibits high specificity in detecting Cr(VI), and the ChrA gene, which exhibits high Cr(VI) tolerance, into Escherichia coli. This recombinant strain, ChrA–ChrB–E. coli, was integrated into a single-chamber microbial fuel cell for accurate continual monitoring over a wide range of Cr(VI) concentrations. ChrA–ChrB–E. coli thrived in temperatures from 25 °C to 45 °C and pH levels between 5 and 8. Its ability to reduce Cr(VI) remained consistent across Cr(VI) forms, carbon sources, and oxyanions. Cyclic voltammetry was employed to verify the electrical activity of the biosensor. The biosensor exhibited a detection limit of 0.0075 mg/L. Under conditions simulating the regulatory emission limit for Cr(VI) of 0.5 mg/L in industrial wastewater, the biosensor achieved a response time of 20 s during continual operation. When tested with synthetic wastewater containing Cr(VI) concentrations from 0.02 to 150 mg/L, the system exhibited high adaptability and facilitated stable monitoring (relative standard deviation ≤ 2.7%). Additionally, the biosensor’s accuracy (−1.73% to 2.5%) matched that of traditional batch methods, highlighting its suitability for real-time Cr(VI) monitoring in aquatic environments. Full article
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15 pages, 3570 KiB  
Article
Transcriptomic Analysis of the Differences in Leaf Color Formation during Stage Transitions in Populus × euramericana ‘Zhonghuahongye’
by Mengjiao Chen, Hui Li, Wan Zhang, Lin Huang and Jingle Zhu
Agronomy 2022, 12(10), 2396; https://doi.org/10.3390/agronomy12102396 - 3 Oct 2022
Cited by 10 | Viewed by 2338
Abstract
To explore the mechanism underlying the leaf color variation of Populus × euramericana ‘Zhonghuahongye’ (‘Zhonghong’ poplar) leaves at different maturation stages, we used ‘Zhonghong’ poplar leaves and analyzed the L* (lightness), a* (redness), and b* (yellowness) color difference values and the pigment contents [...] Read more.
To explore the mechanism underlying the leaf color variation of Populus × euramericana ‘Zhonghuahongye’ (‘Zhonghong’ poplar) leaves at different maturation stages, we used ‘Zhonghong’ poplar leaves and analyzed the L* (lightness), a* (redness), and b* (yellowness) color difference values and the pigment contents in the three maturation stages. The Illumina HiSeqTM 2000 high−throughput sequencing platform was used for transcriptome sequencing analysis, and leaf color changes during stage transitions were preliminarily explored. Overall, with the increase in L* and b* during leaf development, the a*, C* (colour saturation), and chromatic values decreased, the total anthocyanin content decreased, and the chlorophyll and carotenoid content increased. A total of 11,868 differentially expressed genes were identified by transcriptome sequencing. Comparing the expression differences of structural genes involved in anthocyanin synthesis in the leaves at different stages, we identified 5612 genes in the R1 vs. R2 comparison, 10,083 in the R1 vs. R3 comparison, and 6068 in the R2 vs. R3 comparison (R1, R2, R3 refer to samples obtained on 1 April, 6 April, and 11 April, respectively). Key genes such as DFR (Dihydroflavanol 4−reductase), ANS (anthocyanidin synthase), FLS(flavonol synthase) , CHS(chalcone synthase), BZ1(Bronze 1), bHLH35, and bHLH63 were identified. These structural genes and those that encode transcription factors may be related to the regulation of anthocyanin synthesis. Here, the key genes related to leaf color change in ‘Zhonghong’ poplar were discovered, providing an important genetic basis for the subsequent genetic improvement of ‘Zhonghong’ poplar. Full article
(This article belongs to the Special Issue Flowering and Flower Development in Plants)
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15 pages, 3413 KiB  
Article
External Carbon Source Facilitates Indirect Cr (VI) Bioreduction Process by Anaerobic Sludge Produced from Kitchen Waste
by Hui Han, Jinju Hou, Dalei Zhang, Yuanning Zhong, Chao Chen and Qiuzhuo Zhang
Sustainability 2021, 13(9), 4806; https://doi.org/10.3390/su13094806 - 25 Apr 2021
Cited by 4 | Viewed by 2117
Abstract
This study presented the investigation on indirect Cr (VI) bioreduction process by anaerobic sludge produced from kitchen waste (ASKW) using an external source of glucose and sulfate to favor the reducing environment. These compounds were added at the beginning of the experiment along [...] Read more.
This study presented the investigation on indirect Cr (VI) bioreduction process by anaerobic sludge produced from kitchen waste (ASKW) using an external source of glucose and sulfate to favor the reducing environment. These compounds were added at the beginning of the experiment along with 500 mg·L−1 Cr (VI). The system containing 1 g of glucose and 2 g of sulfate attained a higher reduction, which was 10% higher than that of the control experiment. This study indicated that a neutral environment (pH ~7), along with a high release of polysaccharides (PS), improved the removal efficiency by Cr (VI) bioreduction process. Desulfovibrio and Sulfurospirillum (genus level), which accounted for 3% and 1% of the whole microorganism, respectively, were responsible for the sulfidogenic reaction. Additionally, Thermovirga (genus level) reduced from 14% to 11% and 10%. These microorganisms contributed to dominating the indirect Cr (VI) bioreduction process. SEM and FTIR analysis of the sludges obtaining from the indirect Cr (VI) bioreduction systems indicated that the external glucose could facilitate the formation of looser porous structures and richer functional groups of sludges, thus adsorbing more Cr (III) to reduce its toxicity. Meanwhile, the intensity of the hydroxyl bond, which possesses strong reducibility, was much higher after adding external glucose. Chromate reductase gene (chrR) and sulfite reductase gene (dsrA) contributed to the indirect Cr (VI) bioreduction process. These might be the main mechanisms of the external glucose acting on indirect Cr (VI) bioreduction by ASKW. Full article
(This article belongs to the Special Issue Conversion and Utilization of Biomass Waste)
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14 pages, 2961 KiB  
Article
Enhancement of Chromium (VI) Reduction in Microcosms Amended with Lactate or Yeast Extract: A Laboratory-Scale Study
by Valeria Ancona, Claudia Campanale, Marina Tumolo, Domenico De Paola, Claudio Ardito, Angela Volpe and Vito Felice Uricchio
Int. J. Environ. Res. Public Health 2020, 17(3), 704; https://doi.org/10.3390/ijerph17030704 - 21 Jan 2020
Cited by 22 | Viewed by 4057
Abstract
A laboratory-scale study was carried out to evaluate the groundwater bioremediation potential of hexavalent chromium (Cr(VI)), taking into account the chromate pollution of an industrial site located in Southern Italy (Apulia Region). The reduction of Cr(VI) was studied on laboratory microcosms, set up [...] Read more.
A laboratory-scale study was carried out to evaluate the groundwater bioremediation potential of hexavalent chromium (Cr(VI)), taking into account the chromate pollution of an industrial site located in Southern Italy (Apulia Region). The reduction of Cr(VI) was studied on laboratory microcosms, set up in different experimental conditions, namely: ABIO (soil and water sterilized), BIO (soil and water not sterilized), LATT (with the addition of lactate), and YE (with the addition of yeast extract). Control test lines, set up by using sterilized matrices and amendments, were employed to assess the occurrence of the pollutant reduction via chemical processes. By combining molecular (microbial abundance, specific chromate reductase genes (ChR) and the Shewanella oinedensis bacterial strain) with chemical analyses of chromium (VI and III) in the matrices (water and soil) of each microcosm, it was possible to investigate the response of microbial populations to different experimental conditions, and therefore, to assess their bioremediation capability in promoting Cr(VI) reduction. The overall results achieved within this work evidenced the key role of amendments (lactate and yeast extract) in enhancing the biological reduction of hexavalent chromium in the contaminated aqueous phase of laboratory microcosms. The highest value of Cr(VI) removal (99.47%) was obtained in the YE amended microcosms at seven days. Full article
(This article belongs to the Special Issue Water and Health)
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20 pages, 2770 KiB  
Article
Reduction of Hexavalent Chromium and Detection of Chromate Reductase (ChrR) in Stenotrophomonas maltophilia
by Rosa Baldiris, Natali Acosta-Tapia, Alfredo Montes, Jennifer Hernández and Ricardo Vivas-Reyes
Molecules 2018, 23(2), 406; https://doi.org/10.3390/molecules23020406 - 13 Feb 2018
Cited by 125 | Viewed by 11979
Abstract
An Gram negative strain of S. maltophilia, indigenous to environments contaminated by Cr(VI) and identified by biochemical methods and 16S rRNA gene analysis, reduced chromate by 100%, 98–99% and 92% at concentrations in the 10–70, 80–300, and 500 mg/L range, respectively at [...] Read more.
An Gram negative strain of S. maltophilia, indigenous to environments contaminated by Cr(VI) and identified by biochemical methods and 16S rRNA gene analysis, reduced chromate by 100%, 98–99% and 92% at concentrations in the 10–70, 80–300, and 500 mg/L range, respectively at pH 7 and temperature 37 °C. Increasing concentrations of Cr(VI) in the medium lowered the growth rate but could not be directly correlated with the amount of Cr(VI) reduced. The strain also exhibited multiple resistance to antibiotics and tolerance and resistance to various heavy metals (Ni, Zn and Cu), with the exception of Hg. Hexavalent chromium reduction was mainly associated with the soluble fraction of the cell evaluated with crude cell-free extracts. A protein of molecular weight around 25 kDa was detected on SDS-PAGE gel depending on the concentration of hexavalent chromium in the medium (0, 100 and 500 mg/L). In silico analysis in this contribution, revealed the presence of the chromate reductase gene ChrR in S. maltophilia, evidenced through a fragment of around 468 bp obtained experimentally. High Cr(VI) concentration resistance and high Cr(VI) reducing ability of the strain make it a suitable candidate for bioremediation. Full article
(This article belongs to the Section Chemical Biology)
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11 pages, 1749 KiB  
Article
Chromate Reductase YieF from Escherichia coli Enhances Hexavalent Chromium Resistance of Human HepG2 Cells
by Xuan Liu, Gaofeng Wu, Yanli Zhang, Dan Wu, Xiangkai Li and Pu Liu
Int. J. Mol. Sci. 2015, 16(6), 11892-11902; https://doi.org/10.3390/ijms160611892 - 26 May 2015
Cited by 29 | Viewed by 7050
Abstract
Hexavalent chromium (Cr(VI)) is a serious environmental pollutant and human toxicant. Mammalian cells are very sensitive to chromate as they lack efficient chromate detoxifying strategy, e.g., chromate-reducing genes that are widely present in prokaryotes. To test whether introduction of prokaryotic chromate-reducing gene into [...] Read more.
Hexavalent chromium (Cr(VI)) is a serious environmental pollutant and human toxicant. Mammalian cells are very sensitive to chromate as they lack efficient chromate detoxifying strategy, e.g., chromate-reducing genes that are widely present in prokaryotes. To test whether introduction of prokaryotic chromate-reducing gene into mammalian cells could render higher chromate resistance, an Escherichia coli chromate-reducing gene yieF was transfected into human HepG2 cells. The expression of yieF was measured in stably transfected cells HepG2-YieF by quantitative RT-PCR and found up-regulated by 3.89-fold upon Cr(VI) induction. In chromate-reducing ability test, HepG2-YieF cells that harbored the reductase showed significantly higher reducing ability of Cr(VI) than HepG2 control cells. This result was further supported by the evidence of increased Cr(VI)-removing ability of crude cell extract of HepG2-YieF. Moreover, HepG2-YieF demonstrated 10% higher viability and decreased expression of GSH synthesizing enzymes under Cr(VI) stress. Subcellular localization of YieF was determined by tracing GFP-YieF fusion protein that was detected in both nucleus and cytoplasm by laser confocal microscopy. Altogether, this study successfully demonstrated that the expression of a prokaryotic Cr(VI)-reducing gene yieF endowed mammalian cell HepG2 with enhanced chromate resistance, which brought new insight of Cr(VI) detoxification in mammalian cells. Full article
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