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17 pages, 294 KiB  
Review
The Many Faces of Child Abuse: How Clinical, Genetic and Epigenetic Correlates Help Us See the Full Picture
by Enrico Parano, Vito Pavone, Martino Ruggieri, Iside Castagnola, Giuseppe Ettore, Gaia Fusto, Roberta Rizzo and Piero Pavone
Children 2025, 12(6), 797; https://doi.org/10.3390/children12060797 - 18 Jun 2025
Cited by 1 | Viewed by 594
Abstract
Background/Objectives: Child abuse is a pervasive global issue with significant implications for the physical, emotional, and psychological well-being of victims. This review highlights the clinical, molecular, and therapeutic dimensions of child abuse, emphasizing its long-term impact and the need for interdisciplinary approaches. Early [...] Read more.
Background/Objectives: Child abuse is a pervasive global issue with significant implications for the physical, emotional, and psychological well-being of victims. This review highlights the clinical, molecular, and therapeutic dimensions of child abuse, emphasizing its long-term impact and the need for interdisciplinary approaches. Early exposure to abuse activates the hypothalamic-pituitary-adrenal (HPA) axis, leading to chronic cortisol release and subsequent neuroplastic changes in brain regions such as the hippocampus, amygdala, and prefrontal cortex. These molecular alterations, including epigenetic modifications and inflammatory responses, contribute to the heightened risk of psychiatric disorders and chronic illnesses in survivors. Clinically, child abuse presents with diverse manifestations ranging from physical injuries to psychological and developmental disorders, making timely diagnosis challenging. Methods: A multidisciplinary approach involving thorough clinical evaluation, detailed histories, and collaboration with child protection services is essential for accurate diagnosis and effective intervention. Results: Recent advances in molecular biology have identified biomarkers, such as stress-related hormones and epigenetic changes, which provide novel insights into the physiological impact of abuse and potential targets for therapeutic intervention. Current treatment strategies prioritize the child’s safety, psychological well-being, and prevention of further abuse. Trauma-focused cognitive behavioral therapy and family-centered interventions are pivotal in promoting recovery and resilience. Conclusions: Emerging research focuses on integrating molecular findings with clinical practice, utilizing digital health tools, and leveraging big data to develop predictive models and personalized treatments. Interdisciplinary collaboration remains crucial to translating research into policy and practice, ultimately aiming to mitigate the impact of child abuse and improve outcomes for survivors. Full article
(This article belongs to the Section Pediatric Mental Health)
25 pages, 333 KiB  
Review
AI-Driven Advances in Parkinson’s Disease Neurosurgery: Enhancing Patient Selection, Trial Efficiency, and Therapeutic Outcomes
by José E. Valerio, Guillermo de Jesús Aguirre Vera, Maria P. Fernandez Gomez, Jorge Zumaeta and Andrés M. Alvarez-Pinzon
Brain Sci. 2025, 15(5), 494; https://doi.org/10.3390/brainsci15050494 - 9 May 2025
Viewed by 2090
Abstract
Parkinson’s disease (PD) is a progressive neurodegenerative disorder marked by motor and non-motor dysfunctions that severely compromise patients’ quality of life. While pharmacological treatments provide symptomatic relief in the early stages, advanced PD often requires neurosurgical interventions, such as deep brain stimulation (DBS) [...] Read more.
Parkinson’s disease (PD) is a progressive neurodegenerative disorder marked by motor and non-motor dysfunctions that severely compromise patients’ quality of life. While pharmacological treatments provide symptomatic relief in the early stages, advanced PD often requires neurosurgical interventions, such as deep brain stimulation (DBS) and focused ultrasound (FUS), for effective symptom management. A significant challenge in optimizing these therapeutic strategies is the early identification and recruitment of suitable candidates for clinical trials. This review explores the role of artificial intelligence (AI) in advancing neurosurgical and neuroscience interventions for PD, highlighting the ways in which AI-driven platforms are transforming clinical trial design and patient selection. Machine learning (ML) algorithms and big data analytics enable precise patient stratification, risk assessment, and outcome prediction, accelerating the development of novel therapeutic approaches. These innovations improve trial efficiency, broaden treatment options, and enhance patient outcomes. However, integrating AI into clinical trial frameworks presents challenges such as data standardization, regulatory hurdles, and the need for extensive validation. Addressing these obstacles will require collaboration among neurosurgeons, neuroscientists, AI specialists, and regulatory bodies to establish ethical and effective guidelines for AI-driven technologies in PD neurosurgical research. This paper emphasizes the transformative potential of AI and technological innovation in shaping the future of PD neurosurgery, ultimately enhancing therapeutic efficacy and patient care. Full article
41 pages, 2878 KiB  
Review
Modeling Alzheimer’s Disease: A Review of Gene-Modified and Induced Animal Models, Complex Cell Culture Models, and Computational Modeling
by Anna M. Timofeeva, Kseniya S. Aulova and Georgy A. Nevinsky
Brain Sci. 2025, 15(5), 486; https://doi.org/10.3390/brainsci15050486 - 5 May 2025
Viewed by 1739
Abstract
Alzheimer’s disease, a complex neurodegenerative disease, is characterized by the pathological aggregation of insoluble amyloid β and hyperphosphorylated tau. Multiple models of this disease have been employed to investigate the etiology, pathogenesis, and multifactorial aspects of Alzheimer’s disease and facilitate therapeutic development. Mammals, [...] Read more.
Alzheimer’s disease, a complex neurodegenerative disease, is characterized by the pathological aggregation of insoluble amyloid β and hyperphosphorylated tau. Multiple models of this disease have been employed to investigate the etiology, pathogenesis, and multifactorial aspects of Alzheimer’s disease and facilitate therapeutic development. Mammals, especially mice, are the most common models for studying the pathogenesis of this disease in vivo. To date, the scientific literature has documented more than 280 mouse models exhibiting diverse aspects of Alzheimer’s disease pathogenesis. Other mammalian species, including rats, pigs, and primates, have also been utilized as models. Selected aspects of Alzheimer’s disease have also been modeled in simpler model organisms, such as Drosophila melanogaster, Caenorhabditis elegans, and Danio rerio. It is possible to model Alzheimer’s disease not only by creating genetically modified animal lines but also by inducing symptoms of this neurodegenerative disease. This review discusses the main methods of creating induced models, with a particular focus on modeling Alzheimer’s disease on cell cultures. Induced pluripotent stem cell (iPSC) technology has facilitated novel investigations into the mechanistic underpinnings of diverse diseases, including Alzheimer’s. Progress in culturing brain tissue allows for more personalized studies on how drugs affect the brain. Recent years have witnessed substantial advancements in intricate cellular system development, including spheroids, three-dimensional scaffolds, and microfluidic cultures. Microfluidic technologies have emerged as cutting-edge tools for studying intercellular interactions, the tissue microenvironment, and the role of the blood–brain barrier (BBB). Modern biology is experiencing a significant paradigm shift towards utilizing big data and omics technologies. Computational modeling represents a powerful methodology for researching a wide array of human diseases, including Alzheimer’s. Bioinformatic methodologies facilitate the analysis of extensive datasets generated via high-throughput experimentation. It is imperative to underscore the significance of integrating diverse modeling techniques in elucidating pathogenic mechanisms in their entirety. Full article
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27 pages, 704 KiB  
Review
The Progress and Prospects of Data Capital for Zero-Shot Deep Brain–Computer Interfaces
by Wenbao Ma, Teng Ma, Daniel Organisciak, Jude E. T. Waide, Xiangxin Meng and Yang Long
Electronics 2025, 14(3), 508; https://doi.org/10.3390/electronics14030508 - 26 Jan 2025
Viewed by 936
Abstract
The vigorous development of deep learning (DL) has been propelled by big data and high-performance computing. For brain–computer interfaces (BCIs) to benefit from DL in a reliable and scalable manner, the scale and quality of data are crucial. Special emphasis is placed on [...] Read more.
The vigorous development of deep learning (DL) has been propelled by big data and high-performance computing. For brain–computer interfaces (BCIs) to benefit from DL in a reliable and scalable manner, the scale and quality of data are crucial. Special emphasis is placed on the zero-shot learning (ZSL) paradigm, which is essential for enhancing the flexibility and scalability of BCI systems. ZSL enables models to generalise from limited examples to new, unseen tasks, addressing data scarcity challenges and accelerating the development of robust, adaptable BCIs. Despite a growing number of BCI surveys in recent years, there is a notable gap in clearly presenting public data resources. This paper explores the fundamental data capital necessary for large-scale deep learning BCI (DBCI) models. Our key contributions include (1) a systematic review and comprehensive understanding of the current industrial landscape of DBCI datasets; (2) an in-depth analysis of research gaps and trends in DBCI devices, data and applications, offering insights into the progress and prospects for high-quality data foundation and developing large-scale DBCI models; (3) a focus on the paradigm shift brought by ZSL, which is pivotal for the technical potential and readiness of BCIs in the era of multimodal large AI models. Full article
(This article belongs to the Section Artificial Intelligence)
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21 pages, 1511 KiB  
Review
Psychobiotic Properties of Lactiplantibacillus plantarum in Neurodegenerative Diseases
by Mariagiovanna Di Chiano, Fabio Sallustio, Daniela Fiocco, Maria Teresa Rocchetti, Giuseppe Spano, Paola Pontrelli, Antonio Moschetta, Loreto Gesualdo, Raffaella Maria Gadaleta and Anna Gallone
Int. J. Mol. Sci. 2024, 25(17), 9489; https://doi.org/10.3390/ijms25179489 - 31 Aug 2024
Cited by 5 | Viewed by 4220
Abstract
Neurodegenerative disorders are the main cause of cognitive and physical disabilities, affect millions of people worldwide, and their incidence is on the rise. Emerging evidence pinpoints a disturbance of the communication of the gut–brain axis, and in particular to gut microbial dysbiosis, as [...] Read more.
Neurodegenerative disorders are the main cause of cognitive and physical disabilities, affect millions of people worldwide, and their incidence is on the rise. Emerging evidence pinpoints a disturbance of the communication of the gut–brain axis, and in particular to gut microbial dysbiosis, as one of the contributors to the pathogenesis of these diseases. In fact, dysbiosis has been associated with neuro-inflammatory processes, hyperactivation of the neuronal immune system, impaired cognitive functions, aging, depression, sleeping disorders, and anxiety. With the rapid advance in metagenomics, metabolomics, and big data analysis, together with a multidisciplinary approach, a new horizon has just emerged in the fields of translational neurodegenerative disease. In fact, recent studies focusing on taxonomic profiling and leaky gut in the pathogenesis of neurodegenerative disorders are not only shedding light on an overlooked field but are also creating opportunities for biomarker discovery and development of new therapeutic and adjuvant strategies to treat these disorders. Lactiplantibacillus plantarum (LBP) strains are emerging as promising psychobiotics for the treatment of these diseases. In fact, LBP strains are able to promote eubiosis, increase the enrichment of bacteria producing beneficial metabolites such as short-chain fatty acids, boost the production of neurotransmitters, and support the homeostasis of the gut–brain axis. In this review, we summarize the current knowledge on the role of the gut microbiota in the pathogenesis of neurodegenerative disorders with a particular focus on the benefits of LBP strains in Alzheimer’s disease, Parkinson’s disease, amyotrophic lateral sclerosis, autism, anxiety, and depression. Full article
(This article belongs to the Special Issue Molecular Insights into Neurotrophins and Neuropsychiatric Disorders)
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16 pages, 3993 KiB  
Article
Computational Analysis of Marker Genes in Alzheimer’s Disease across Multiple Brain Regions
by Panagiotis Karanikolaos, Marios G. Krokidis, Themis P. Exarchos and Panagiotis Vlamos
Information 2024, 15(9), 523; https://doi.org/10.3390/info15090523 - 27 Aug 2024
Viewed by 1964
Abstract
Alzheimer’s disease (AD) is the most common cause of neurodegenerative dementia in the elderly, which is characterized by progressive cognitive impairment. Herein, we undertake a sophisticated computational analysis by integrating single-cell RNA sequencing (scRNA-seq) data from multiple brain regions significantly affected by the [...] Read more.
Alzheimer’s disease (AD) is the most common cause of neurodegenerative dementia in the elderly, which is characterized by progressive cognitive impairment. Herein, we undertake a sophisticated computational analysis by integrating single-cell RNA sequencing (scRNA-seq) data from multiple brain regions significantly affected by the disease, including the entorhinal cortex, prefrontal cortex, superior frontal gyrus, and superior parietal lobe. Our pipeline combines datasets derived from the aforementioned tissues into a unified analysis framework, facilitating cross-regional comparisons to provide a holistic view of the impact of the disease on the cellular and molecular landscape of the brain. We employed advanced computational techniques such as batch effect correction, normalization, dimensionality reduction, clustering, and visualization to explore cellular heterogeneity and gene expression patterns across these regions. Our findings suggest that enabling the integration of data from multiple batches can significantly enhance our understanding of AD complexity, thereby identifying key molecular targets for potential therapeutic intervention. This study established a precedent for future research by demonstrating how existing data can be reanalysed in a coherent manner to elucidate the systemic nature of the disease and inform the development of more effective diagnostic tools and targeted therapies. Full article
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11 pages, 4656 KiB  
Article
Mechanically Adjustable 4-Channel RF Transceiver Coil Array for Rat Brain Imaging in a Whole-Body 7 T MR Scanner
by Sigrun Roat, Lena Nohava and Elmar Laistler
Sensors 2024, 24(16), 5377; https://doi.org/10.3390/s24165377 - 20 Aug 2024
Viewed by 1270
Abstract
Investigations of human brain disorders are frequently conducted in rodent models using magnetic resonance imaging. Due to the small specimen size and the increase in signal-to-noise ratio with the static magnetic field strength, dedicated small-bore animal scanners can be used to acquire high-resolution [...] Read more.
Investigations of human brain disorders are frequently conducted in rodent models using magnetic resonance imaging. Due to the small specimen size and the increase in signal-to-noise ratio with the static magnetic field strength, dedicated small-bore animal scanners can be used to acquire high-resolution data. Ultra-high-field (≥7 T) whole-body human scanners are increasingly available, and they can also be used for animal investigations. Dedicated sensors, in this case, radiofrequency coils, are required to achieve sufficient sensitivity for the high spatial resolution needed for imaging small anatomical structures. In this work, a four-channel transceiver coil array for rat brain imaging at 7 T is presented, which can be adjusted for use on a wide range of differently sized rats, from infants to large adults. Three suitable array designs (with two to four elements covering the whole rat brain) were compared using full-wave 3D electromagnetic simulation. An optimized static B1+ shim was derived to maximize B1+ in the rat brain for both small and big rats. The design, together with a 3D-printed adjustable coil housing, was tested and validated in ex vivo rat bench and MRI measurements. Full article
(This article belongs to the Special Issue Sensors in Magnetic Resonance Imaging)
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35 pages, 8757 KiB  
Review
From Information to Knowledge: A Role for Knowledge Networks in Decision Making and Action Selection
by Jagmeet S. Kanwal
Information 2024, 15(8), 487; https://doi.org/10.3390/info15080487 - 15 Aug 2024
Cited by 1 | Viewed by 1900
Abstract
The brain receives information via sensory inputs through the peripheral nervous system and stores a small subset as memories within the central nervous system. Short-term, working memory is present in the hippocampus whereas long-term memories are distributed within neural networks throughout the brain. [...] Read more.
The brain receives information via sensory inputs through the peripheral nervous system and stores a small subset as memories within the central nervous system. Short-term, working memory is present in the hippocampus whereas long-term memories are distributed within neural networks throughout the brain. Elegant studies on the mechanisms for memory storage and the neuroeconomic formulation of human decision making have been recognized with Nobel Prizes in Physiology or Medicine and in Economics, respectively. There is a wide gap, however, in our understanding of how memories of disparate bits of information translate into “knowledge”, and the neural mechanisms by which knowledge is used to make decisions. I propose that the conceptualization of a “knowledge network” for the creation, storage and recall of knowledge is critical to start bridging this gap. Knowledge creation involves value-driven contextualization of memories through cross-validation via certainty-seeking behaviors, including rumination or reflection. Knowledge recall, like memory, may occur via oscillatory activity that dynamically links multiple networks. These networks may show correlated activity and interactivity despite their presence within widely separated regions of the nervous system, including the brainstem, spinal cord and gut. The hippocampal–amygdala complex together with the entorhinal and prefrontal cortices are likely components of multiple knowledge networks since they participate in the contextual recall of memories and action selection. Sleep and reflection processes and attentional mechanisms mediated by the habenula are expected to play a key role in knowledge creation and consolidation. Unlike a straightforward test of memory, determining the loci and mechanisms for the storage and recall of knowledge requires the implementation of a naturalistic decision-making paradigm. By formalizing a neuroscientific concept of knowledge networks, we can experimentally test their functionality by recording large-scale neural activity during decision making in awake, naturally behaving animals. These types of studies are difficult but important also for advancing knowledge-driven as opposed to big data-driven models of artificial intelligence. A knowledge network-driven understanding of brain function may have practical implications in other spheres, such as education and the treatment of mental disorders. Full article
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40 pages, 5798 KiB  
Review
Global Realism with Bipolar Strings: From Bell Test to Real-World Causal-Logical Quantum Gravity and Brain-Universe Similarity for Entangled Machine Thinking and Imagination
by Wen-Ran Zhang
Information 2024, 15(8), 456; https://doi.org/10.3390/info15080456 - 1 Aug 2024
Cited by 1 | Viewed by 4438
Abstract
Following Einstein’s prediction that “Physics constitutes a logical system of thought” and “Nature is the realization of the simplest conceivable mathematical ideas”, this topical review outlines a formal extension of local realism limited by the speed of light to [...] Read more.
Following Einstein’s prediction that “Physics constitutes a logical system of thought” and “Nature is the realization of the simplest conceivable mathematical ideas”, this topical review outlines a formal extension of local realism limited by the speed of light to global realism with bipolar strings (GRBS) that unifies the principle of locality with quantum nonlocality. The related literature is critically reviewed to justify GRBS which is shown as a necessary and inevitable consequence of the Bell test and an equilibrium-based axiomatization of physics and quantum information science for brain–universe similarity and human-level intelligence. With definable causality in regularity and mind–light–matter unity for quantum superposition/entanglement, bipolar universal modus ponens (BUMP) in GRBS makes quantum emergence and submergence of spacetime logically ubiquitous in both the physical and mental worlds—an unexpected but long-sought simplification of quantum gravity with complete background independence. It is shown that GRBS forms a basis for quantum intelligence (QI)—a spacetime transcendent, quantum–digital compatible, analytical quantum computing paradigm where bipolar strings lead to bipolar entropy as a nonlinear bipolar dynamic and set–theoretic unification of order and disorder as well as linearity and nonlinearity for energy/information conservation, regeneration, and degeneration toward quantum cognition and quantum biology (QCQB) as well as information-conservational blackhole keypad compression and big bang data recovery. Subsequently, GRBS is justified as a real-world quantum gravity (RWQG) theory—a bipolar relativistic causal–logical reconceptualization and unification of string theory, loop quantum gravity, and M-theory—the three roads to quantum gravity. Based on GRBS, the following is posited: (1) life is a living bipolar superstring regulated by bipolar entropy; (2) thinking with consciousness and memory growth as a prerequisite for human-level intelligence is fundamentally mind–light–matter unitary QI logically equivalent to quantum emergence (entanglement) and submergence (collapse) of spacetime. These two posits lead to a positive answer to the question “If AI machine cannot think, can QI machine think?”. Causal–logical brain modeling (CLBM) for entangled machine thinking and imagination (EMTI) is proposed and graphically illustrated. The testability and falsifiability of GRBS are discussed. Full article
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19 pages, 9860 KiB  
Article
High-Density Electroencephalogram Facilitates the Detection of Small Stimuli in Code-Modulated Visual Evoked Potential Brain–Computer Interfaces
by Qingyu Sun, Shaojie Zhang, Guoya Dong, Weihua Pei, Xiaorong Gao and Yijun Wang
Sensors 2024, 24(11), 3521; https://doi.org/10.3390/s24113521 - 30 May 2024
Cited by 2 | Viewed by 1528
Abstract
In recent years, there has been a considerable amount of research on visual evoked potential (VEP)-based brain–computer interfaces (BCIs). However, it remains a big challenge to detect VEPs elicited by small visual stimuli. To address this challenge, this study employed a 256-electrode high-density [...] Read more.
In recent years, there has been a considerable amount of research on visual evoked potential (VEP)-based brain–computer interfaces (BCIs). However, it remains a big challenge to detect VEPs elicited by small visual stimuli. To address this challenge, this study employed a 256-electrode high-density electroencephalogram (EEG) cap with 66 electrodes in the parietal and occipital lobes to record EEG signals. An online BCI system based on code-modulated VEP (C-VEP) was designed and implemented with thirty targets modulated by a time-shifted binary pseudo-random sequence. A task-discriminant component analysis (TDCA) algorithm was employed for feature extraction and classification. The offline and online experiments were designed to assess EEG responses and classification performance for comparison across four different stimulus sizes at visual angles of 0.5°, 1°, 2°, and 3°. By optimizing the data length for each subject in the online experiment, information transfer rates (ITRs) of 126.48 ± 14.14 bits/min, 221.73 ± 15.69 bits/min, 258.39 ± 9.28 bits/min, and 266.40 ± 6.52 bits/min were achieved for 0.5°, 1°, 2°, and 3°, respectively. This study further compared the EEG features and classification performance of the 66-electrode layout from the 256-electrode EEG cap, the 32-electrode layout from the 128-electrode EEG cap, and the 21-electrode layout from the 64-electrode EEG cap, elucidating the pivotal importance of a higher electrode density in enhancing the performance of C-VEP BCI systems using small stimuli. Full article
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19 pages, 6024 KiB  
Article
A Hardware-Based Orientation Detection System Using Dendritic Computation
by Masahiro Nomura, Tianqi Chen, Cheng Tang, Yuki Todo, Rong Sun, Bin Li and Zheng Tang
Electronics 2024, 13(7), 1367; https://doi.org/10.3390/electronics13071367 - 4 Apr 2024
Cited by 1 | Viewed by 1620
Abstract
Studying how objects are positioned is vital for improving technologies like robots, cameras, and virtual reality. In our earlier papers, we introduced a bio-inspired artificial visual system for orientation detection, demonstrating its superiority over traditional systems with higher recognition rates, greater biological resemblance, [...] Read more.
Studying how objects are positioned is vital for improving technologies like robots, cameras, and virtual reality. In our earlier papers, we introduced a bio-inspired artificial visual system for orientation detection, demonstrating its superiority over traditional systems with higher recognition rates, greater biological resemblance, and increased resistance to noise. In this paper, we propose a hardware-based orientation detection system (ODS). The ODS is implemented by a multiple dendritic neuron model (DNM), and a neuronal pruning scheme for the DNM is proposed. After performing the neuronal pruning, only the synapses in the direct and inverse connections states are retained. The former can be realized by a comparator, and the latter can be replaced by a combination of a comparator and a logic NOT gate. For the dendritic function, the connection of synapses on dendrites can be realized with logic AND gates. Then, the output of the neuron is equivalent to a logic OR gate. Compared with other machine learning methods, this logic circuit circumvents floating-point arithmetic and therefore requires very little computing resources to perform complex classification. Furthermore, the ODS can be designed based on experience, so no learning process is required. The superiority of ODS is verified by experiments on binary, grayscale, and color image datasets. The ability to process data rapidly owing to advantages such as parallel computation and simple hardware implementation allows the ODS to be desirable in the era of big data. It is worth mentioning that the experimental results are corroborated with anatomical, physiological, and neuroscientific studies, which may provide us with a new insight for understanding the complex functions in the human brain. Full article
(This article belongs to the Special Issue New Advances in Visual Object Detection and Tracking)
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20 pages, 10775 KiB  
Article
Generative-Adversarial-Network-Based Image Reconstruction for the Capacitively Coupled Electrical Impedance Tomography of Stroke
by Mikhail Ivanenko, Damian Wanta, Waldemar T. Smolik, Przemysław Wróblewski and Mateusz Midura
Life 2024, 14(3), 419; https://doi.org/10.3390/life14030419 - 21 Mar 2024
Cited by 6 | Viewed by 2681
Abstract
This study investigated the potential of machine-learning-based stroke image reconstruction in capacitively coupled electrical impedance tomography. The quality of brain images reconstructed using the adversarial neural network (cGAN) was examined. The big data required for supervised network training were generated using a two-dimensional [...] Read more.
This study investigated the potential of machine-learning-based stroke image reconstruction in capacitively coupled electrical impedance tomography. The quality of brain images reconstructed using the adversarial neural network (cGAN) was examined. The big data required for supervised network training were generated using a two-dimensional numerical simulation. The phantom of an axial cross-section of the head without and with impact lesions was an average of a three-centimeter-thick layer corresponding to the height of the sensing electrodes. Stroke was modeled using regions with characteristic electrical parameters for tissues with reduced perfusion. The head phantom included skin, skull bone, white matter, gray matter, and cerebrospinal fluid. The coupling capacitance was taken into account in the 16-electrode capacitive sensor model. A dedicated ECTsim toolkit for Matlab was used to solve the forward problem and simulate measurements. A conditional generative adversarial network (cGAN) was trained using a numerically generated dataset containing samples corresponding to healthy patients and patients affected by either hemorrhagic or ischemic stroke. The validation showed that the quality of images obtained using supervised learning and cGAN was promising. It is possible to visually distinguish when the image corresponds to the patient affected by stroke, and changes caused by hemorrhagic stroke are the most visible. The continuation of work towards image reconstruction for measurements of physical phantoms is justified. Full article
(This article belongs to the Special Issue Advances in Artificial Intelligence for Medical Image Analysis)
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4 pages, 15553 KiB  
Proceeding Paper
Three-Dimensional Visualization of Astronomy Data Using Virtual Reality
by Gilles Ferrand
Phys. Sci. Forum 2023, 8(1), 71; https://doi.org/10.3390/psf2023008071 - 5 Dec 2023
Viewed by 1432
Abstract
Visualization is an essential part of research, both to explore one’s data and to communicate one’s findings with others. Many data products in astronomy come in the form of multi-dimensional cubes, and since our brains are tuned for recognition in a 3D world, [...] Read more.
Visualization is an essential part of research, both to explore one’s data and to communicate one’s findings with others. Many data products in astronomy come in the form of multi-dimensional cubes, and since our brains are tuned for recognition in a 3D world, we ought to display and manipulate these in 3D space. This is possible with virtual reality (VR) devices. Drawing from our experiments developing immersive and interactive 3D experiences from actual science data at the Astrophysical Big Bang Laboratory (ABBL), this paper gives an overview of the opportunities and challenges that are awaiting astrophysicists in the burgeoning VR space. It covers both software and hardware matters, as well as practical aspects for successful delivery to the public. Full article
(This article belongs to the Proceedings of The 23rd International Workshop on Neutrinos from Accelerators)
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15 pages, 4233 KiB  
Article
Toward Morphologic Atlasing of the Human Whole Brain at the Nanoscale
by Wieslaw L. Nowinski
Big Data Cogn. Comput. 2023, 7(4), 179; https://doi.org/10.3390/bdcc7040179 - 1 Dec 2023
Cited by 2 | Viewed by 2885
Abstract
Although no dataset at the nanoscale for the entire human brain has yet been acquired and neither a nanoscale human whole brain atlas has been constructed, tremendous progress in neuroimaging and high-performance computing makes them feasible in the non-distant future. To construct the [...] Read more.
Although no dataset at the nanoscale for the entire human brain has yet been acquired and neither a nanoscale human whole brain atlas has been constructed, tremendous progress in neuroimaging and high-performance computing makes them feasible in the non-distant future. To construct the human whole brain nanoscale atlas, there are several challenges, and here, we address two, i.e., the morphology modeling of the brain at the nanoscale and designing of a nanoscale brain atlas. A new nanoscale neuronal format is introduced to describe data necessary and sufficient to model the entire human brain at the nanoscale, enabling calculations of the synaptome and connectome. The design of the nanoscale brain atlas covers design principles, content, architecture, navigation, functionality, and user interface. Three novel design principles are introduced supporting navigation, exploration, and calculations, namely, a gross neuroanatomy-guided navigation of micro/nanoscale neuroanatomy; a movable and zoomable sampling volume of interest for navigation and exploration; and a nanoscale data processing in a parallel-pipeline mode exploiting parallelism resulting from the decomposition of gross neuroanatomy parcellated into structures and regions as well as nano neuroanatomy decomposed into neurons and synapses, enabling the distributed construction and continual enhancement of the nanoscale atlas. Numerous applications of this atlas can be contemplated ranging from proofreading and continual multi-site extension to exploration, morphometric and network-related analyses, and knowledge discovery. To my best knowledge, this is the first proposed neuronal morphology nanoscale model and the first attempt to design a human whole brain atlas at the nanoscale. Full article
(This article belongs to the Special Issue Big Data System for Global Health)
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24 pages, 8390 KiB  
Article
Salient Arithmetic Data Extraction from Brain Activity via an Improved Deep Network
by Nastaran Khaleghi, Shaghayegh Hashemi, Sevda Zafarmandi Ardabili, Sobhan Sheykhivand and Sebelan Danishvar
Sensors 2023, 23(23), 9351; https://doi.org/10.3390/s23239351 - 23 Nov 2023
Cited by 6 | Viewed by 1546
Abstract
Interpretation of neural activity in response to stimulations received from the surrounding environment is necessary to realize automatic brain decoding. Analyzing the brain recordings corresponding to visual stimulation helps to infer the effects of perception occurring by vision on brain activity. In this [...] Read more.
Interpretation of neural activity in response to stimulations received from the surrounding environment is necessary to realize automatic brain decoding. Analyzing the brain recordings corresponding to visual stimulation helps to infer the effects of perception occurring by vision on brain activity. In this paper, the impact of arithmetic concepts on vision-related brain records has been considered and an efficient convolutional neural network-based generative adversarial network (CNN-GAN) is proposed to map the electroencephalogram (EEG) to salient parts of the image stimuli. The first part of the proposed network consists of depth-wise one-dimensional convolution layers to classify the brain signals into 10 different categories according to Modified National Institute of Standards and Technology (MNIST) image digits. The output of the CNN part is fed forward to a fine-tuned GAN in the proposed model. The performance of the proposed CNN part is evaluated via the visually provoked 14-channel MindBigData recorded by David Vivancos, corresponding to images of 10 digits. An average accuracy of 95.4% is obtained for the CNN part for classification. The performance of the proposed CNN-GAN is evaluated based on saliency metrics of SSIM and CC equal to 92.9% and 97.28%, respectively. Furthermore, the EEG-based reconstruction of MNIST digits is accomplished by transferring and tuning the improved CNN-GAN’s trained weights. Full article
(This article belongs to the Special Issue Biomedical Signal Processing and Health Monitoring Based on Sensors)
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