Search Results (11)

Gray snapper (Lutjanus griseus) move from inshore to offshore habitats as they mature and spawn along the West Florida Shelf. The connectivity between offshore spawning sites and inshore settlement regions along the Eastern Gulf of America (formerly Gulf of Mexico, hereafter Gulf) coast is unknown, and this study therefore predicted these larval dispersal pathways. To determine larval transport, an ocean model was integrated with the Connectivity Modeling System (CMS), which is a biophysical model that allowed for the inclusion of larval behavior and updated spawning information for the gray snapper. Our larval dispersal model showed that spawning sites offshore of Tampa, in the Florida Keys, and in the Florida Middle Grounds had the highest percentages of successfully settled larvae inshore. Larvae that were spawned at the offshore Tampa Bay and offshore Southwest Florida spawning sites were mostly transported to the Tampa Bay and Southwest Florida settlement regions, showing local retention. In contrast, larvae spawned offshore in the Florida Middle Grounds were transported northwest, exclusively to the Florida Panhandle. In addition, there was no difference in the proportion of successful larval settlers between full and new moon spawning events. Since gray snapper are an important recreational fishery in the eastern Gulf, especially off the west coast of Florida, it is important to identify spawning sites that have the largest proportions of settling larvae, such as offshore Tampa Bay. Full article

Blooms of the harmful dinoflagellate Karenia brevis on the West Florida Shelf (WFS), Gulf of Mexico, are hypothesized to initiate in association with the colonial cyanobacterium Trichodesmium spp. and benefit from dissolved organic nitrogen (DON) release derived from N₂-fixation by the cyanobacteria. Previous studies have detected DON release using direct experimental measurements, but there have been few studies that have followed nutrient release by in situ blooms of Trichodesmium and the associated plankton community. It was determined that long-term Trichodesmium spp. and Karenia brevis abundances on the WFS were related, following a 2-month lag. A separate Eulerian study of a Trichodesmium erythraeum bloom event was conducted over 9 days on the Great Barrier Reef. Concentrations of T. erythraeum increased over the course of the study, with coincident increases in dinoflagellate abundance and decreases in diatom abundance. Inside the bloom, concentrations of NH₄⁺, PO₄³⁻, and DON increased significantly. The copepod grazer Macrosetella gracilis also increased in abundance as T. erythraeum numbers increased, contributing to nutrient release. Copepod grazing rates were measured, and N release rates estimated. Together, these studies show that Trichodesmium blooms have consequences for dinoflagellate abundance at both seasonal and ephemeral scales via direct and indirect N release. Full article

In the days following the passage of Hurricane Ian over the West Florida Shelf, a large plume of calcium carbonate (CaCO₃) mud slurry was observed extending from west of the Dry Tortugas and curving to the east into the Straits of Florida. This discreet target offered a unique opportunity to quantify the suspended mass of CaCO₃ in the slurry. Estimating the concentration of sediment in a plume of suspended CaCO₃ by satellite sensor observations has been stymied up to now owing to a lack of in situ suspended sediment measurements during storm events, as “sea truth” data for such events is difficult to acquire. However, the Particulate Inorganic Carbon (PIC) standard product provided by the NASA Ocean Biology Distributed Active Archive Center (OBDAAC) is based on Moderate Resolution Imaging Spectroradiometer (MODIS) observations of a plume of coccolith chalk released from a ship in the “Chalk-Ex” experiment. Due to the similarities (particle size, mineralogy, and reflectance properties) of the suspended chalk features and the Ian-induced slurry, we utilized this data product to make initial estimates of the concentration of suspended sediment in the plume. Full article

The harmful algal bloom species, Karenia brevis, forms annual, often intense blooms in the Gulf of Mexico, particularly along the west Florida shelf. Though the ability of K. brevis blooms to cause mass mortalities in juvenile fish are well documented, the direct effect of bloom concentrations on larval fish has not been studied extensively. To better understand the potential effect of K. brevis on larval fish survival, laboratory spawned red porgy (Pagrus pagrus) larvae from 4–26 days post-hatch were exposed to concentrations of K. brevis observed in the field for either 24 or 48 h. This species is representative of fish which spawn in regions of the Gulf of Mexico and whose larvae are epipelagic and may encounter K. brevis blooms. In this study, three different K. brevis strains varying in the amount of brevetoxin produced were tested. Larval survivorship was found to be inversely proportional to the amount of brevetoxin produced by each strain. The EC₅₀ value from the combined 24 h experiments was ~163,000 K. brevis cells L⁻¹, which corresponds to cell concentrations found in moderately dense blooms. Larval mortality also increased substantially in the 48 h versus 24 h exposure treatments. These findings indicate K. brevis blooms have the potential to contribute to natural mortality of fish larvae and further reduce inter-annual recruitment of fishery species whose stocks in the Gulf of Mexico may already be depleted. Full article

This paper evaluates the contribution of waves to the total predicted storm surges in a Hurricane Irma hindcast, using ADCIRC+SWAN and ADCIRC models. The contribution of waves is quantified by subtracting the water levels hindcasted by ADCIRC from those hindcasted by ADCIRC+SWAN, using OWI meteorological forcing in both models. Databases of water level time series, wave characteristic time series, and high-water marks are used to validate the model performance. Based on the application of our methodology to the coastline around Florida, a peninsula with unique geomorphic characteristics, we find that wave runup has the largest contribution to the total water levels on the south and northeast coasts. Waves increase the surge on the south and northeast coasts, due to large fetch and wave runups. On the west coast, the wave effect is not significant, due to limited fetch. However, significant wave heights become greater as the waves propagate into the deep inner gulf. The continental shelf on Florida’s west coast plays a critical role in decreasing the significant wave height and sheltering the coastal areas from large wave effects. Both models underpredict the high-water marks, but ADCIRC+SWAN reduces the underprediction and improves the parity with the observed data, although the scatter is slightly higher than that of ADCIRC. Full article

Karenia mikimotoi is a toxic bloom-forming dinoflagellate that sometimes co-blooms with Karenia brevis in the Gulf of Mexico, especially on the West Florida Shelf where strong vertical temperature gradients and rapid changes in nitrogen (N) can be found. Here, the short-term interactions of temperature, N form, and availability on photosynthesis–irradiance responses were examined using rapid light curves and PAM fluorometry in order to understand their interactions, and how they may affect photosynthetic yields. Cultures of K. mikimotoi were enriched with either nitrate (NO₃⁻), ammonium (NH₄⁺), or urea with varying amounts (1, 5, 10, 20, 50 µM-N) and then incubated at temperatures of 15, 20, 25, 30 °C for 1 h. At 15–25 °C, fluorescence parameters (Fv/Fm, rETR) when averaged for all N treatments were comparable. Within a given light intensity, increasing all forms of N concentrations generally led to higher photosynthetic yields. Cells appeared to dynamically balance the “push” due to photon flux pressure and reductant generation, with consumption in overall metabolism (“pull” due to demand). However, at 30 °C, all fluorescence parameters declined precipitously, but differential responses were observed depending on N form. Cells enriched with urea at 30 °C showed a smaller decline in fluorescence parameters than cells treated with NO₃⁻ or NH₄⁺, implying that urea might induce a photoprotective mechanism by increasing metabolic “pull”. Full article

Harmful algal blooms (HABs), events that kill fish, impact human health in multiple ways, and contaminate water supplies, have increased in frequency, magnitude, and impacts in numerous marine and freshwaters around the world. Blooms of the toxic dinoflagellate Karenia brevis have resulted in thousands of tons of dead fish, deaths to many other marine organisms, numerous respiratory-related hospitalizations, and tens to hundreds of millions of dollars in economic damage along the West Florida coast in recent years. Four types of machine learning algorithms, Support Vector Machine (SVM), Relevance Vector Machine (RVM), Naïve Bayes classifier (NB), and Artificial Neural Network (ANN), were developed and compared in their ability to predict these blooms. Comparing the 21 year monitoring dataset of K. brevis abundance, RVM and NB were found to have better skills in bloom prediction than the other two approaches. The importance of upwelling-favorable northerly winds in increasing K. brevis probability, and of onshore westerly winds in preventing blooms from dispersing offshore, were quantified using RVM, and all models were used to explore the importance of large river flows and the nutrients they supply in regulating blooms. These models provide new tools for management of these devastating algal blooms. Full article

The west Florida shelf (WFS; Gulf of Mexico, USA) is an important area for commercial and recreational fishing, yet much of it remains unmapped and unexplored, hindering effective monitoring of fish stocks. The goals of this study were to map the habitat at an intensively fished area on the WFS known as “The Elbow”, assess the differences in fish communities among different habitat types, and estimate the abundance of each fish taxa within the study area. High-resolution multibeam bathymetric and backscatter data were combined with high-definition (HD) video data collected from a near-bottom towed vehicle to characterize benthic habitat as well as identify and enumerate fishes. Two semi-automated statistical classifiers were implemented for obtaining substrate maps. The supervised classification (random forest) performed significantly better (p = 0.001; α = 0.05) than the unsupervised classification (k-means clustering). Additionally, we found it was important to include predictors at a range of spatial scales. Significant differences were found in the fish community composition among the different habitat types, with both substrate and vertical relief found to be important with rock substrate and higher relief areas generally associated with greater fish density. Our results are consistent with the idea that offshore hard-bottom habitats, particularly those of higher vertical relief, serve as “essential fish habitat”, as these rocky habitats account for just 4% of the study area but 65% of the estimated total fish abundance. However, sand contributes 35% to total fish abundance despite comparably low densities due to its large area, indicating the importance of including these habitats in estimates of abundance as well. This work demonstrates the utility of combining towed underwater video sampling and multibeam echosounder maps for habitat mapping and estimation of fish abundance. Full article

Atmospheric cold front propagation across the northern Gulf of Mexico is characterized by elevated surface wind velocities and a ~10–15 °C drop in surface air temperatures. These meteorological conditions result in significant heat energy losses from the surface ocean to the overlying atmosphere. These seasonally recurring cold-air outbreak events may penetrate the southern portion of the West Florida continental shelf and initiate turbulent and convective overturn of the water column. Examination of true color images derived from ocean-viewing, satellite-based radiometer data reveals coincident and substantial surface water discolorations that are optically similar to smaller-scale “whiting events,” despite the regional-scale extent of the observed phenomenon (>25,000 km²). Coupled air–sea numerical simulations suggest the surface water discoloration occurs and is sustained where the entire water column is dynamically unstable. The simulation results indicate significant density (σ_t) inversions between the surface and bottom waters. Thus, the combined numerical model and remote sensing analysis suggest that convective turbulence may be contributing to the sustained ventilation of bottom waters containing a high concentration of suspended particulates. High-temporal resolution true color images rendered from the GOES-R Advanced Baseline Imager (ABI) data appear to support the surface water discoloration’s turbulent-driven nature. Full article

We describe the application of a Neural Network (NN) previously developed by us, to the detection and tracking, of Karenia brevis Harmful Algal Blooms (KB HABs) that plague the coasts of the West Florida Shelf (WFS) using Visible Infrared Imaging Radiometer Suite (VIIRS) satellite observations. Previous approaches for the detection of KB HABs in the WFS primarily used observations from the Moderate Resolution Imaging Spectroradiometer Aqua (MODIS-A) satellite. They depended on the remote sensing reflectance signal at the 678 nm chlorophyll fluorescence band (Rrs678) needed for both the normalized fluorescence height (nFLH) and Red Band Difference algorithms (RBD) currently used. VIIRS which has replaced MODIS-A, unfortunately does not have a 678 nm fluorescence channel so we customized the NN approach to retrieve phytoplankton absorption at 443 nm (a_ph443) using only Rrs measurements from existing VIIRS channels at 486, 551 and 671 nm. The a_ph443 values in these retrieved VIIRS images, can in turn be correlated to chlorophyll-a concentrations [Chla] and KB cell counts. To retrieve KB values, the VIIRS NN retrieved a_ph443 images are filtered by applying limiting constraints, defined by (i) low backscatter at Rrs 551 nm and (ii) a minimum a_ph443 value known to be associated with KB HABs in the WFS. The resulting filtered residual images, are then used to delineate and quantify the existing KB HABs. Comparisons with KB HABs satellite retrievals obtained using other techniques, including nFLH, as well as with in situ measurements reported over a four year period, confirm the viability of the NN technique, when combined with the filtering constraints devised, for effective detection of KB HABs. Full article

A “black water” event, as observed from satellites, occurred off southwest Florida in 2012. Satellite observations suggested that the event started in early January and ended in mid-April 2012. The black water patch formed off central west Florida and advected southward towards Florida Bay and the Florida Keys with the shelf circulation, which was confirmed by satellite-tracked surface drifter trajectories. Compared with a previous black water event in 2002, the 2012 event was weaker in terms of spatial and temporal coverage. An in situ survey indicated that the 2012 black water patch contained toxic K. brevis and had relatively low CDOM (colored dissolved organic matter) and turbidity but high chlorophyll-a concentrations, while salinity was somewhat high compared with historical values. Further analysis revealed that the 2012 black water was formed by the K. brevis bloom initiated off central west Florida in late September 2011, while river runoff, Trichodesmium and possibly submarine groundwater discharge also played important roles in its formation. Black water patches can affect benthic coral reef communities by decreasing light availability at the bottom, and enhanced nutrient concentrations from black water patches support massive macroalgae growth that can overgrow coral reefs. It is thus important to continue the integrated observations where satellites provide synoptic and repeated observations of such adverse water quality events. Full article