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Keywords = RRSV

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10 pages, 1099 KB  
Article
Improved RSV Neutralization Assay Using Recombinant RSV Expressing Reporter Fluorescent Protein
by Yutaro Yamagata, Michiko Toizumi, Jean-Francois Eleouet, Marie-Anne Rameix-Welti, Makoto Takeda and Lay-Myint Yoshida
Methods Protoc. 2025, 8(3), 60; https://doi.org/10.3390/mps8030060 - 4 Jun 2025
Cited by 1 | Viewed by 2786
Abstract
Human respiratory syncytial virus (RSV) causes acute respiratory illness, attributing to deaths among young children and older adults worldwide. RSV neutralization assay is an important tool to measure RSV neutralization antibody that can prevent infection and severe complication of RSV. Conventional RSV neutralization [...] Read more.
Human respiratory syncytial virus (RSV) causes acute respiratory illness, attributing to deaths among young children and older adults worldwide. RSV neutralization assay is an important tool to measure RSV neutralization antibody that can prevent infection and severe complication of RSV. Conventional RSV neutralization assays have some limitations of speed and cost, especially for expensive kits, reagents or instruments required for detection. To solve this problem, this paper describes an improved simple and economical RSV neutralization assay protocol using recombinant RSV (rRSV) expressing reporter fluorescent protein to measure RSV growth as reporter activity with plate reader. The condition of 3 days culture demonstrated sufficient fluorescent activity even when small amounts of rRSV were used to inoculate Hep-2 cells. In addition, white 96-well cell culture plate showed better stable reporter activities than black plate. Furthermore, RSV neutralization assay protocol using rRSV-reporter fluorescent protein demonstrated similar signal detection capacity for RSV antibody titer detection compared to other protocols, such as rRSV-Luciferase and ELISA assay. The new RSV neutralization assay protocol can be applied to RSV antibody titration of numerous samples necessary for RSV surveillance or antiviral testing. Full article
(This article belongs to the Section Molecular and Cellular Biology)
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14 pages, 9022 KB  
Article
Enhanced Pathogenic Consequences Induced by a Seven-Amino-Acid Extension in the G Protein of the HRSV BA9 Genotype
by Na Wang, Jingjing Song, Lei Cao, Naiying Mao, Yuqing Shi, Jie Jiang, Wuyang Zhu and Yan Zhang
Int. J. Mol. Sci. 2025, 26(5), 2081; https://doi.org/10.3390/ijms26052081 - 27 Feb 2025
Cited by 3 | Viewed by 1317
Abstract
In a previous outbreak of the human respiratory syncytial virus (HRSV), we identified a variant strain of genotype BA9 with a seven-amino-acid extension (Q-R-L-Q-S-Y-A) at the C-terminus of the attachment protein (G). To assess the impact of this extension on the virulence of [...] Read more.
In a previous outbreak of the human respiratory syncytial virus (HRSV), we identified a variant strain of genotype BA9 with a seven-amino-acid extension (Q-R-L-Q-S-Y-A) at the C-terminus of the attachment protein (G). To assess the impact of this extension on the virulence of HRSV, two full-length infectious clones using the wild strain of genotype BA9 as a backbone, one containing the seven-amino-acid extension (rRSV BA9 WT), and the other deleting this extension (rRSV BA9 Δ7AA), were successfully rescued using a reverse genetics system. The biological properties and virulence of the two rescued viruses were then compared and analyzed in vitro and in vivo. Compared to the rRSV BA9 Δ7AA, the rRSV BA9 WT exhibited a larger plaque size and a more pronounced suppression of the host cell innate immune response in vitro (IFN-β levels: 154.33 pg/mL vs. 11.27 pg/mL). The rRSV BA9 WT demonstrated increased adaptability in mice, with a 10-fold higher lung viral load and a stronger inflammatory response following intranasal exposure. Our study primarily demonstrated that the C-terminal extension of the G protein of the HRSV can enhance viral virulence, underscoring the importance of virological surveillance in the prevention and treatment of severe HRSV-related disease. Full article
(This article belongs to the Special Issue The Interaction Between Cell and Virus, 2nd Edition)
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25 pages, 1647 KB  
Review
Insight into Rice Resistance to the Brown Planthopper: Gene Cloning, Functional Analysis, and Breeding Applications
by Yangdong Ye, Shangye Xiong, Xin Guan, Tianxin Tang, Zhihong Zhu, Xiao Zhu, Jie Hu, Jianguo Wu and Shuai Zhang
Int. J. Mol. Sci. 2024, 25(24), 13397; https://doi.org/10.3390/ijms252413397 - 13 Dec 2024
Cited by 11 | Viewed by 4616
Abstract
This review provides a comprehensive overview of the current understanding of rice resistance to the brown planthopper (BPH), a major pest that poses significant threats to rice production through direct feeding damage and by transmitting viruses such as Rice grassy stunt virus (RGSV) [...] Read more.
This review provides a comprehensive overview of the current understanding of rice resistance to the brown planthopper (BPH), a major pest that poses significant threats to rice production through direct feeding damage and by transmitting viruses such as Rice grassy stunt virus (RGSV) and Rice ragged stunt virus (RRSV). We highlight the emergence of various BPH biotypes that have overcome specific resistance genes in rice. Advances in genetic mapping and cloning have identified 17 BPH resistance genes, classified into typical R genes encoding nucleotide-binding leucine-rich repeat (NLR) proteins and atypical R genes such as lectin receptor kinases and proteins affecting cell wall composition. The molecular mechanisms of these genes involve the activation of plant defense pathways mediated by phytohormones like jasmonic acid (JA), salicylic acid (SA), and ethylene, as well as the production of defensive metabolites. We also examine the complex interactions between BPH salivary proteins and rice defense responses, noting how salivary effectors can both suppress and trigger plant immunity. The development and improvement of BPH-resistant rice varieties through conventional breeding and molecular marker-assisted selection are discussed, including strategies like gene pyramiding to enhance resistance durability. Finally, we outline the challenges and future directions in breeding for durable BPH resistance, emphasizing the need for continued research on resistance mechanisms and the development of rice varieties with broad-spectrum and long-lasting resistance. Full article
(This article belongs to the Special Issue Molecular and Structural Research Advances in Model Plants)
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9 pages, 2580 KB  
Communication
RT-RPA-PfAgo System: A Rapid, Sensitive, and Specific Multiplex Detection Method for Rice-Infecting Viruses
by Yan Liu, Wenqiang Xia, Wei Zhao, Peiying Hao, Zhengliang Wang, Xiaoping Yu, Xuping Shentu and Kai Sun
Biosensors 2023, 13(10), 941; https://doi.org/10.3390/bios13100941 - 20 Oct 2023
Cited by 20 | Viewed by 4294
Abstract
The advancement in CRISPR-Cas biosensors has transmuted the detection of plant viruses owing to their rapid and higher sensitivity. However, false positives and restricted multiplexing capabilities are still the challenges faced by this technology, demanding the exploration of novel methodologies. In this study, [...] Read more.
The advancement in CRISPR-Cas biosensors has transmuted the detection of plant viruses owing to their rapid and higher sensitivity. However, false positives and restricted multiplexing capabilities are still the challenges faced by this technology, demanding the exploration of novel methodologies. In this study, a novel detection system was developed by integrating reverse transcriptome (RT) techniques with recombinase polymerase isothermal amplification (RPA) and Pyrococcus furiosus Argonaute (PfAgo). The RT-RPA-PfAgo system enabled the simultaneous detection of rice ragged stunt virus (RRSV), rice grassy stunt virus (RGSV), and rice black streaked dwarf virus (RBSDV). Identifying targets via guide DNA without being hindered by protospacer adjacent motif sequences is the inherent merit of PfAgo, with the additional advantage of it being simple, cost-effective, and exceptionally sensitive, with detection limits between 3.13 and 5.13 copies/µL, in addition to it effectively differentiating between the three distinct viruses. The field evaluations were also in accordance with RT-PCR methods. The RT-RPA-PfAgo system proved to be a robust, versatile, highly specific, and sensitive method with great potential for practicality in future plant virus diagnostics. Full article
(This article belongs to the Special Issue Biosensing Technologies for Bacteria and Virus Detections)
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15 pages, 2517 KB  
Article
A First-in-Human Trial to Evaluate the Safety and Immunogenicity of a G Protein-Based Recombinant Respiratory Syncytial Virus Vaccine in Healthy Adults 18–45 Years of Age
by Xin Cheng, Gan Zhao, Aihua Dong, Zhonghuai He, Jiarong Wang, Brian Jiang, Bo Wang, Miaomiao Wang, Xuefen Huai, Shijie Zhang, Shuangshuang Feng, Hong Qin and Bin Wang
Vaccines 2023, 11(5), 999; https://doi.org/10.3390/vaccines11050999 - 18 May 2023
Cited by 23 | Viewed by 4485
Abstract
Background: With the enormous morbidity and mortality caused by respiratory syncytial virus (RSV) infections among infants and the elderly, vaccines against RSV infections are in large market demand. Methods: We conducted a first-in-human (FIH), randomized, double-blind, placebo-controlled dose escalation study to evaluate the [...] Read more.
Background: With the enormous morbidity and mortality caused by respiratory syncytial virus (RSV) infections among infants and the elderly, vaccines against RSV infections are in large market demand. Methods: We conducted a first-in-human (FIH), randomized, double-blind, placebo-controlled dose escalation study to evaluate the safety and immunogenicity response of the rRSV vaccine (BARS13) in healthy adults aged 18–45. A total of 60 eligible participants were randomly assigned to receive one of four dose levels or vaccination regimens of BARS13 or placebo at a 4:1 ratio. Results: The mean age was 27.40, and 23.3% (14/60) were men. No treatment-emergent adverse events (TEAEs) led to study withdrawal within 30 days after each vaccination. No serious adverse event (SAE) was reported. Most of the treatment-emergent adverse events (TEAEs) recorded were classified as mild. The high-dose repeat group had a serum-specific antibody GMC of 885.74 IU/mL (95% CI: 406.25–1931.17) 30 days after the first dose and 1482.12 IU/mL (706.56–3108.99) 30 days after the second dose, both higher than the GMC in the low-dose repeat group (885.74 IU/mL [406.25–1931.17] and 1187.10 IU/ mL [610.01–2310.13]). Conclusions: BARS13 had a generally good safety and tolerability profile, and no significant difference in terms of adverse reaction severity or frequency was observed between different dose groups. The immune response in repeat-dose recipients shows more potential in further study and has guiding significance for the dose selection of subsequent studies. Full article
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16 pages, 3044 KB  
Article
Immune Responses and Transcriptomic Analysis of Nilaparvata lugens against Metarhizium anisopliae YTTR Mediated by Rice Ragged Stunt Virus
by Xuewen Li, Bang Zhang, Jiaxing Zou, Qianqian Li, Jianli Liu, Shouping Cai, Komivi Senyo Akutse, Minsheng You and Sheng Lin
Plants 2023, 12(2), 345; https://doi.org/10.3390/plants12020345 - 11 Jan 2023
Cited by 4 | Viewed by 2891
Abstract
Plant viruses and entomopathogenic fungi (EPF) can both elicit immune responses in insects. This study was designed to clarify whether plant viruses could affect the efficacy of EPF and explore the immune responses of brown planthopper (BPH), Nilaparvata lugens, in response to different [...] Read more.
Plant viruses and entomopathogenic fungi (EPF) can both elicit immune responses in insects. This study was designed to clarify whether plant viruses could affect the efficacy of EPF and explore the immune responses of brown planthopper (BPH), Nilaparvata lugens, in response to different pathogen infections. In this study, a strain of Metarhizium anisopliae YTTR with high pathogenicity against BPH was selected and explored whether rice ragged stunt virus (RRSV) could affect its lethality against BPH. RNA-seq was used to detect the inner responses of BPH in response to RRSV and M. anisopliae YTTR infection. Results showed that M. anisopliae YTTR has strong lethality against BPH (RRSV-carrying and RRSV-free). RRSV invasion did not affect the susceptibility of BPH against M. anisopliae YTTR at all concentrations. At 1 × 108 spores/mL, M. anisopliae YTTR caused a cumulative mortality of 80% to BPH at 7 days post-treatment. The largest numbers of differentially expressed genes (DEGs) was obtained in BPH treated with the two pathogens than in other single pathogen treatment. In addition, KEGG enrichment analysis showed that the DEGs were mostly enriched in immune and physiological mechanisms-related pathways. Both RRSV and M. anisopliae YTTR could induce the expression changes of immune-related genes. However, most of the immune genes had varying expression patterns in different treatment. Our findings demonstrated that RRSV invasion did not have any significant effect on the pathogenicity of M. anisopliae YTTR, while the co-infection of M. anisopliae YTTR and RRSV induced more immune and physiological mechanisms -related genes’ responses. In addition, the presence of RRSV could render the interplay between BPH and M. anisopliae YTTR more intricate. These findings laid a basis for further elucidating the immune response mechanisms of RRSV-mediated BPH to M. anisopliae infection. Full article
(This article belongs to the Special Issue Latest Research on Biological Control of Pests and Crop Protection)
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17 pages, 1919 KB  
Article
Optimized RNA-Silencing Strategies for Rice Ragged Stunt Virus Resistance in Rice
by Severine Lacombe, Martine Bangratz, Hoang Anh Ta, Thanh Duc Nguyen, Pascal Gantet and Christophe Brugidou
Plants 2021, 10(10), 2008; https://doi.org/10.3390/plants10102008 - 24 Sep 2021
Cited by 8 | Viewed by 3245
Abstract
Rice ragged stunt virus (RRSV) is one of the most damaging viruses of the rice culture area in south and far-eastern Asia. To date, no genetic resistance has been identified and only expensive and non-environmentally friendly chemical treatments are deployed to fight this [...] Read more.
Rice ragged stunt virus (RRSV) is one of the most damaging viruses of the rice culture area in south and far-eastern Asia. To date, no genetic resistance has been identified and only expensive and non-environmentally friendly chemical treatments are deployed to fight this important disease. Non-chemical approaches based on RNA-silencing have been developed as resistance strategies against viruses. Here, we optimized classical miRNA and siRNA-based strategies to obtain efficient and durable resistance to RRSV. miRNA-based strategies are involved in producing artificial miRNA (amiR) targeting viral genomes in plants. Classically, only one amiR is produced from a single construct. We demonstrated for the first time that two amiRs targeting conserved regions of RRSV genomes could be transgenically produced in Nicotiana benthamiana and in rice for a single precursor. Transgenic rice plants producing either one or two amiR were produced. Despite efficient amiR accumulations, miRNA-based strategies with single or double amiRs failed to achieve efficient RRSV resistance in transformed rice plants. This suggests that this strategy may not be adapted to RRSV, which could rapidly evolve to counteract them. Another RNA-silencing-based method for viral resistance concerns producing several viral siRNAs targeting a viral fragment. These viral siRNAs are produced from an inverted repeat construct carrying the targeted viral fragment. Here, we optimized the inverted repeat construct using a chimeric fragment carrying conserved sequences of three different RRSV genes instead of one. Of the three selected homozygous transgenic plants, one failed to accumulate the expected siRNA. The two other ones accumulated siRNAs from either one or three fragments. A strong reduction of RRSV symptoms was observed only in transgenic plants expressing siRNAs. We consequently demonstrated, for the first time, an efficient and environmentally friendly resistance to RRSV in rice based on the siRNA-mediated strategy. Full article
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12 pages, 1838 KB  
Article
Impact of Two Reoviruses and Their Coinfection on the Rice RNAi System and vsiRNA Production
by Zhanbiao Li, Tong Zhang, Xiuqin Huang and Guohui Zhou
Viruses 2018, 10(11), 594; https://doi.org/10.3390/v10110594 - 30 Oct 2018
Cited by 20 | Viewed by 4771
Abstract
Both Southern rice black-streaked dwarf virus (SRBSDV) and Rice ragged stunt virus (RRSV) belong to the family Reoviridae, and synergistic infection of these two viruses commonly occurs in the field. This study revealed that both SRBSDV and RRSV affect the RNA interference [...] Read more.
Both Southern rice black-streaked dwarf virus (SRBSDV) and Rice ragged stunt virus (RRSV) belong to the family Reoviridae, and synergistic infection of these two viruses commonly occurs in the field. This study revealed that both SRBSDV and RRSV affect the RNA interference (RNAi) pathway and form different virus-derived interfering RNA (vsiRNA) profiles in rice. Co-infection of rice by SRBSDV and RRSV up-regulated the expression of rice DICER-like (DCL) proteins but down-regulated the expression of rice RNA-dependent RNA polymerases (RDRs), and the accumulation of vsiRNAs of either RBSDV or RRSV was decreased compared with that in singly infected plants. The majority of SRBSDV vsiRNAs were 21 nt or 22 nt in length, whether plants were singly infected with SRBSDV or co-infected with RRSV. On the other hand, the majority of RRSV vsiRNAs were 20 nt, 21 nt, or 22 nt in length, among which those 20 nt in length accounted for the largest proportion; co-infection with SRBSDV further increased the proportion of 20 nt vsiRNAs and decreased the proportion of 21 nt vsiRNAs. Co-infection had no effects on the strand favoritism and hot spots of the vsiRNAs, but changed the bias of the 5′ terminal nucleotide significantly. This study provides a reference for further study on the pathogenesis and synergistic mechanism of SRBSDV and RRSV. Full article
(This article belongs to the Special Issue Plant-Virus Interactions)
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15 pages, 7754 KB  
Article
Evaluation of Rice Resistance to Southern Rice Black-Streaked Dwarf Virus and Rice Ragged Stunt Virus through Combined Field Tests, Quantitative Real-Time PCR, and Proteome Analysis
by Zhenchao Wang, Lu Yu, Linhong Jin, Wenli Wang, Qi Zhao, Longlu Ran, Xiangyang Li, Zhuo Chen, Rong Guo, Yongtian Wei, Zhongcheng Yang, Enlong Liu, Deyu Hu and Baoan Song
Viruses 2017, 9(2), 37; https://doi.org/10.3390/v9020037 - 22 Feb 2017
Cited by 13 | Viewed by 7397
Abstract
Diseases caused by southern rice black-streaked dwarf virus (SRBSDV) and rice ragged stunt virus (RRSV) considerably decrease grain yield. Therefore, determining rice cultivars with high resistance to SRBSDV and RRSV is necessary. In this study, rice cultivars with high resistance to SRBSDV and [...] Read more.
Diseases caused by southern rice black-streaked dwarf virus (SRBSDV) and rice ragged stunt virus (RRSV) considerably decrease grain yield. Therefore, determining rice cultivars with high resistance to SRBSDV and RRSV is necessary. In this study, rice cultivars with high resistance to SRBSDV and RRSV were evaluated through field trials in Shidian and Mangshi county, Yunnan province, China. SYBR Green I-based quantitative real-time polymerase chain reaction (qRT-PCR) analysis was used to quantitatively detect virus gene expression levels in different rice varieties. The following parameters were applied to evaluate rice resistance: acre yield (A.Y.), incidence of infected plants (I.I.P.), virus load (V.L.), disease index (D.I.), and insect quantity (I.Q.) per 100 clusters. Zhongzheyou1 (Z1) and Liangyou2186 (L2186) were considered the most suitable varieties with integrated higher A.Y., lower I.I.P., V.L., D.I. and I.Q. features. In order to investigate the mechanism of rice resistance, comparative label-free shotgun liquid chromatography tandem-mass spectrometry (LC-MS/MS) proteomic approaches were applied to comprehensively describe the proteomics of rice varieties’ SRBSDV tolerance. Systemic acquired resistance (SAR)-related proteins in Z1 and L2186 may result in the superior resistance of these varieties compared with Fengyouxiangzhan (FYXZ). Full article
(This article belongs to the Section Viruses of Plants, Fungi and Protozoa)
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