Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (7)

Search Parameters:
Keywords = PagMYB148

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
30 pages, 2978 KB  
Review
Advances in Genetic Engineering Techniques for Improved Forest Trees: Applications in Biomass, Stress Resilience and Carbon Sequestration
by Sophia Hydarry Matola, Jingjing Li, Meiou Sun, Lu Yang, Wenhui Zhuang and Jingli Yang
Int. J. Mol. Sci. 2025, 26(20), 10192; https://doi.org/10.3390/ijms262010192 - 20 Oct 2025
Cited by 1 | Viewed by 3454
Abstract
Forest biotechnology is rapidly advancing from conventional breeding toward molecular design, enabling the development of genetically modified trees (GMTs) with traits such as accelerated growth, stress resilience, and improved wood properties. This review systematically examines recent breakthroughs in tree genetic engineering, beginning with [...] Read more.
Forest biotechnology is rapidly advancing from conventional breeding toward molecular design, enabling the development of genetically modified trees (GMTs) with traits such as accelerated growth, stress resilience, and improved wood properties. This review systematically examines recent breakthroughs in tree genetic engineering, beginning with traditional methods and progressing to CRISPR-based precision editing and multi-omics-guided trait design. We highlight applications in wood quality (e.g., lignin reduction in Populus spp.), drought tolerance (e.g., PagHyPRP1 and PtoMYB142 editing), phytoremediation (e.g., heavy metal accumulation in poplar), and carbon sequestration. We also evaluate ecological and socio-regulatory challenges, including gene flow risks and public acceptance. Based on this integrated analysis, we outline future directions for responsible deployment of GMTs in sustainable forestry and global carbon neutrality efforts. Full article
(This article belongs to the Special Issue Forest Tree Genetics, Breeding and Environmental Adaption)
Show Figures

Figure 1

25 pages, 19913 KB  
Article
Genome-Wide Identification, Evolution and Expression Analysis of the U-Box E3 Ubiquitin Ligases Gene Family in Poplar (Populus alba × P. tremula var. glandulosa)
by Bobo Song, Qixuan Wei, Xudong Liu, Kexin Sun, Lingdou Liao, Anning Zu, Yifan Wei, Qian Liu, Fangfang Fu and Meiling Ming
Forests 2025, 16(5), 749; https://doi.org/10.3390/f16050749 - 27 Apr 2025
Viewed by 1163
Abstract
Plant U-box E3 ubiquitin ligases (PUBs) serve as crucial regulators of protein degradation and are fundamentally involved in plant developmental processes and stress response mechanisms. Despite their well-characterized roles in model plant species, the PUB gene family in the hybrid poplar (Populus [...] Read more.
Plant U-box E3 ubiquitin ligases (PUBs) serve as crucial regulators of protein degradation and are fundamentally involved in plant developmental processes and stress response mechanisms. Despite their well-characterized roles in model plant species, the PUB gene family in the hybrid poplar (Populus alba × P. tremula var. glandulosa) remains poorly understood. By conducting a comprehensive genome-wide analysis, we identified 152 PUB genes in poplar and phylogenetically classified them into five distinct clades based on a comparative analysis with Arabidopsis thaliana and tomato PUB homologs. The structural characterization revealed that numerous PagPUB proteins possess additional functional domains, including ARM and WD40 repeats, which are indicative of potential functional diversification. Genomic distribution and synteny analyses demonstrated that the expansion of the PUB gene family predominantly resulted from whole-genome duplication (WGD) events, with evolutionary constraint analyses (Ka/Ks ratios < 1) suggesting strong purifying selection. An examination of the promoter region uncovered an abundance of stress-responsive cis-elements, particularly ABRE and MYB binding sites associated with abiotic stress and hormonal regulation. Transcriptome profiling demonstrated both tissue-specific expression patterns and dynamic regulation under diverse stress conditions, including drought, salinity, temperature extremes, and pathogen infection. Our findings provide the first systematic characterization of the PUB gene family in poplar and establish a valuable framework for elucidating their evolutionary history and functional significance in environmental stress adaptation. Full article
(This article belongs to the Section Genetics and Molecular Biology)
Show Figures

Figure 1

14 pages, 5710 KB  
Article
Functional Characterization of PagMYB148 in Salt Tolerance Response and Gene Expression Analysis under Abiotic Stress Conditions in Hybrid Poplar
by Su Jin Park, Hyun-A Jang, Hyoshin Lee and Hyunmo Choi
Forests 2024, 15(8), 1344; https://doi.org/10.3390/f15081344 - 2 Aug 2024
Cited by 3 | Viewed by 1626
Abstract
MYB transcription factors containing an R2R3 DNA-binding domain are involved in the regulation of various physiological processes, such as responses to abiotic stresses, including salt stress. In poplar, various MYB transcription factors regulate stress responses. In this study, we aimed to identify the [...] Read more.
MYB transcription factors containing an R2R3 DNA-binding domain are involved in the regulation of various physiological processes, such as responses to abiotic stresses, including salt stress. In poplar, various MYB transcription factors regulate stress responses. In this study, we aimed to identify the correlation between the transcription factor MYB148 and salt stress responses in the hybrid poplar (Populus alba × P. glandulosa). We induced a mutation in the MYB-binding domain of PagMYB148 using CRISPR/Cas9-mediated editing of the PagMYB148 gene, which induced a more suppressed expression of PagMYB148 than that in the wild-type. Although salt and drought treatments enhance the expression of PagMYB148, the pagmyb148-transgenic plants exhibited more sensitive phenotypes than the wild-type plants under salt stress. After exposure to salinity stress, the chlorophyll content was lower in pagmyb148-transgenic plants than in wild-type plants, whereas the mutation increased ion leakage from cells. Additionally, the expression of genes involved in the salt stress response was higher in pagmyb148-transgenic plants than in the wild-type. After salt treatment, pagmyb148-transgenic plants exhibited an increased level of H2O2 and reduced activity of antioxidant enzymes. In summary, the MYB148 transcription factor is involved in the regulation of salt stress resistance in hybrid poplar trees. This report contributes to providing a basis for further investigating the molecular mechanisms of the poplar PagMYB148 transcription factor under abiotic stress. Full article
Show Figures

Figure 1

14 pages, 3439 KB  
Article
Genome-Wide Identification and Expression Profiling of Velvet Complex Transcription Factors in Populus alba × Populus glandulosa
by Yuanyuan Hao, Xiaojing Yan and Quanzi Li
Int. J. Mol. Sci. 2024, 25(7), 3926; https://doi.org/10.3390/ijms25073926 - 31 Mar 2024
Cited by 1 | Viewed by 2391
Abstract
The discovery of new genes with novel functions is a major driver of adaptive evolutionary innovation in plants. Especially in woody plants, due to genome expansion, new genes evolve to regulate the processes of growth and development. In this study, we characterized the [...] Read more.
The discovery of new genes with novel functions is a major driver of adaptive evolutionary innovation in plants. Especially in woody plants, due to genome expansion, new genes evolve to regulate the processes of growth and development. In this study, we characterized the unique VeA transcription factor family in Populus alba × Populus glandulosa, which is associated with secondary metabolism. Twenty VeA genes were characterized systematically on their phylogeny, genomic distribution, gene structure and conserved motif, promoter binding site, and expression profiling. Furthermore, through ChIP-qPCR, Y1H, and effector-reporter assays, it was demonstrated that PagMYB128 directly regulated PagVeA3 to influence the biosynthesis of secondary metabolites. These results provide a basis for further elucidating the function of VeAs gene in poplar and its genetic regulation mechanism. Full article
(This article belongs to the Special Issue Latest Research on Plant Genomics and Genome Editing)
Show Figures

Figure 1

13 pages, 5577 KB  
Article
PagMYB205 Negatively Affects Poplar Salt Tolerance through Reactive Oxygen Species Scavenging and Root Vitality Modulation
by Lieding Zhou, Xuhui Huan, Kai Zhao, Xia Jin, Jia Hu, Shuhui Du, Youzhi Han and Shengji Wang
Int. J. Mol. Sci. 2023, 24(20), 15437; https://doi.org/10.3390/ijms242015437 - 22 Oct 2023
Cited by 17 | Viewed by 2474
Abstract
Salt stress is one of the major abiotic stresses that limits plant growth and development. The MYB transcription factor family plays essential roles in plant growth and development, as well as stress tolerance processes. In this study, the cDNA of the 84K poplar [...] Read more.
Salt stress is one of the major abiotic stresses that limits plant growth and development. The MYB transcription factor family plays essential roles in plant growth and development, as well as stress tolerance processes. In this study, the cDNA of the 84K poplar (Populus abla × Populus glandulosa) was used as a template to clone the full length of the PagMYB205 gene fragment, and transgenic poplar lines with PagMYB205 overexpression (OX) or inhibited expression (RNAi, RNA interference) were cultivated. The role of PagMYB205 in poplar growth and development and salt tolerance was detected using morphological and physiological methods. The full-length CDS sequence of PagMYB205 was 906 bp, encoding 301 amino acids, and the upstream promoter sequence contained abiotic stress-related cis-acting elements. The results of subcellular localization and transactivation assays showed that the protein had no self-activating activity and was localized in the nucleus. Under salt stress, the rooting rate and root vitality of RNAi were higher than OX and wild type (WT). However, the malondialdehyde (MDA) content of the RNAi lines was significantly lower than that of the wild-type (WT) and OX lines, but the reactive oxygen species (ROS) scavenging ability, such as the peroxidase (POD), superoxide dismutase (SOD), and catalase (CAT) enzyme activities, was dramatically more powerful. Most significantly of all, the RNAi3 line with the lowest expression level of PagMYB205 had the lowest MDA content, the best enzyme activity and root vitality, and the best salt stress tolerance compared to the other lines. The above results suggest that the transcription factor PagMYB205 could negatively regulate salt stress tolerance by regulating antioxidant enzyme activity and root vitality. Full article
(This article belongs to the Special Issue Advances in Forest Tree Physiology, Breeding and Genetic Research)
Show Figures

Figure 1

18 pages, 7007 KB  
Article
Genome-Wide Identification of the ERF Transcription Factor Family for Structure Analysis, Expression Pattern, and Response to Drought Stress in Populus alba × Populus glandulosa
by Dong Zeng, Li-Juan Dai, Xiang Li, Wei Li, Guan-Zheng Qu and Shuang Li
Int. J. Mol. Sci. 2023, 24(4), 3697; https://doi.org/10.3390/ijms24043697 - 12 Feb 2023
Cited by 22 | Viewed by 3498
Abstract
The Ethylene Responsive Factor (ERF) transcription factor family is important for regulating plant growth and stress responses. Although the expression patterns of ERF family members have been reported in many plant species, their role in Populus alba × Populus glandulosa, an important [...] Read more.
The Ethylene Responsive Factor (ERF) transcription factor family is important for regulating plant growth and stress responses. Although the expression patterns of ERF family members have been reported in many plant species, their role in Populus alba × Populus glandulosa, an important model plant for forest research, remains unclear. In this study, we identified 209 PagERF transcription factors by analyzing the P. alba × P. glandulosa genome. We analyzed their amino acid sequences, molecular weight, theoretical pI (Isoelectric point), instability index, aliphatic index, grand average of hydropathicity, and subcellular localization. Most PagERFs were predicted to localize in the nucleus, with only a few PagERFs localized in the cytoplasm and nucleus. Phylogenetic analysis divided the PagERF proteins into ten groups, Class I to X, with those belonging to the same group containing similar motifs. Cis-acting elements associated with plant hormones, abiotic stress responses, and MYB binding sites were analyzed in the promoters of PagERF genes. We used transcriptome data to analyze the expression patterns of PagERF genes in different tissues of P. alba × P. glandulosa, including axillary buds, young leaves, functional leaves, cambium, xylem, and roots, and the results indicated that PagERF genes are expressed in all tissues of P. alba × P. glandulosa, especially in roots. Quantitative verification results were consistent with transcriptome data. When P. alba × P. glandulosa seedlings were treated with 6% polyethylene glycol 6000 (PEG6000), the results of RT-qRCR showed that nine PagERF genes responded to drought stress in various tissues. This study provides a new perspective on the roles of PagERF family members in regulating plant growth and development, and responses to stress in P. alba × P. glandulosa. Our study provides a theoretical basis for ERF family research in the future. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
Show Figures

Figure 1

26 pages, 4379 KB  
Article
The Osmotin-Like Protein Gene PdOLP1 Is Involved in Secondary Cell Wall Biosynthesis during Wood Formation in Poplar
by Shaofeng Li, Yaoxiang Zhang, Xuebing Xin, Changjun Ding, Fuling Lv, Wenjuan Mo, Yongxiu Xia, Shaoli Wang, Jingyan Cai, Lifang Sun, Manyi Du, Chenxi Dong, Xu Gao, Xinlu Dai, Jianhui Zhang and Jinshuang Sun
Int. J. Mol. Sci. 2020, 21(11), 3993; https://doi.org/10.3390/ijms21113993 - 2 Jun 2020
Cited by 24 | Viewed by 4737
Abstract
Osmotin-like proteins (OLPs) mediate defenses against abiotic and biotic stresses and fungal pathogens in plants. However, no OLPs have been functionally elucidated in poplar. Here, we report an osmotin-like protein designated PdOLP1 from Populus deltoides (Marsh.). Expression analysis showed that PdOLP1 transcripts were [...] Read more.
Osmotin-like proteins (OLPs) mediate defenses against abiotic and biotic stresses and fungal pathogens in plants. However, no OLPs have been functionally elucidated in poplar. Here, we report an osmotin-like protein designated PdOLP1 from Populus deltoides (Marsh.). Expression analysis showed that PdOLP1 transcripts were mainly present in immature xylem and immature phloem during vascular tissue development in P. deltoides. We conducted phenotypic, anatomical, and molecular analyses of PdOLP1-overexpressing lines and the PdOLP1-downregulated hybrid poplar 84K (Populus alba × Populus glandulosa) (Hybrid poplar 84K PagOLP1, PagOLP2, PagOLP3 and PagOLP4 are highly homologous to PdOLP1, and are downregulated in PdOLP1-downregulated hybrid poplar 84K). The overexpression of PdOLP1 led to a reduction in the radial width and cell layer number in the xylem and phloem zones, in expression of genes involved in lignin biosynthesis, and in the fibers and vessels of xylem cell walls in the overexpressing lines. Additionally, the xylem vessels and fibers of PdOLP1-downregulated poplar exhibited increased secondary cell wall thickness. Elevated expression of secondary wall biosynthetic genes was accompanied by increases in lignin content, dry weight biomass, and carbon storage in PdOLP1-downregulated lines. A PdOLP1 coexpression network was constructed and showed that PdOLP1 was coexpressed with a large number of genes involved in secondary cell wall biosynthesis and wood development in poplar. Moreover, based on transcriptional activation assays, PtobZIP5 and PtobHLH7 activated the PdOLP1 promoter, whereas PtoBLH8 and PtoWRKY40 repressed it. A yeast one-hybrid (Y1H) assay confirmed interaction of PtoBLH8, PtoMYB3, and PtoWRKY40 with the PdOLP1 promoter in vivo. Together, our results suggest that PdOLP1 is a negative regulator of secondary wall biosynthesis and may be valuable for manipulating secondary cell wall deposition to improve carbon fixation efficiency in tree species. Full article
(This article belongs to the Section Molecular Biology)
Show Figures

Figure 1

Back to TopTop