Search Results (287)

Postharvest soft rot is a major constraint in kiwifruit production, causing substantial economic losses and raising food safety concerns. Therefore, the development of sustainable biocontrol alternatives to conventional chemical treatments is urgently needed. In this study, thirty-seven fungi were isolated from healthy kiwifruit tissues and rhizosphere soil and screened for their biocontrol potential. Three highly effective antagonistic strains were ultimately identified: Mucor circinelloides N2-1-1, Aspergillus niger Pb-2-2, and Trichoderma hamatum Nd-1-1. In vitro antagonism assays showed that A. niger Pb-2-2 exhibited the strongest and broadest-spectrum inhibitory activity against four postharvest pathogens, namely Fusarium sp., Alternaria sp., Botryosphaeriaceae sp., and Phomopsis sp. In contrast, in vivo protection assays demonstrated that T. hamatum Nd-1-1 almost provided the highest control efficacy against all four pathogens in kiwifruit fruit. Fermentation broth protection experiments further revealed that A. niger Pb-2-2 produced stable and broad-spectrum antimicrobial metabolites. Although M. circinelloides N2-1-1 showed the weakest antagonistic activity among the three fungi, this is the first report indicating that M. circinelloides has antagonistic activity against phytopathogenic fungi. Physiological analyses indicated that all three antagonistic fungi alleviated the inhibitory effects of pathogens on superoxide dismutase, catalase, and ascorbate peroxidase activities, helped maintain reactive oxygen species homeostasis, and activated the phenylpropanoid pathway, thereby enhancing disease resistance in kiwifruit. These findings provide a theoretical basis and promising microbial resources for the biological control of postharvest soft rot in kiwifruit. Full article

Leaf and root fungal endophytes (LFEs and RFEs) represent essential yet distinct components of the plant holobiont, but their ecological relationships remain poorly understood. Here, we investigated the community structure of LFE and RFE across 45 plant species in an alpine meadow ecosystem using high-throughput sequencing. We found that the richness of RFEs was significantly higher than that of LFEs whereas their diversity showed no significant difference. The community composition of RFEs significantly differed with LFE communities and indicator analysis revealed that Aureobasidium, Didymella, and Mycosphaerella enriched in leaves and Mucor, Candida, and Trichoderma dominating roots. Fungal endophytes form a complementary functional network that supports plant growth, defense, and resource utilization. Plant functional traits rather than phylogenetic distance shaped the structure of both LFE and RFE communities. Despite their compositional divergence, LFEs and RFEs shared a large number of taxa and showed a coordinated assembly pattern. The coordinated variation between leaf and root functional traits, coupled with the fluxes of LFEs and RFEs, is a critical driver of this pattern. Overall, our results provide integrated evidence that LFE and RFE communities constitute ecologically distinct yet interconnected components of the plant holobiont, jointly contributing to plant performance and ecosystem functioning. Full article

Orchid root-associated fungal endophytes (ORAFEs) represent an important component of fungal biodiversity with potential applications in orchid conservation and sustainable production. ORAFEs were isolated from the roots of four orchid species in Veracruz, Mexico: Gongora galeata, Maxillaria densa, Maxillaria tenuifolia, and Maxillaria variabilis to investigate their diversity and plant-growth-promoting (PGP) properties. Taxonomic identification relied on morphological and molecular phylogenetic analyses using ITS, TEF1-α, β-tubulin (TUB2), and actin (ACT). Fifty-six isolates were grouped into 20 morphotypes representing 15 genera, including Aspergillus, Biscogniauxia, Chaetomium, Colletotrichum, Thelonectria, Diaporthe, Fusarium, Geotrichum, Hypoxylon, Lasiodiplodia, Mucor, Periconia, Pestalotiopsis, Trichoderma, Xylaria, and two isolates that may represent undescribed taxa requiring further polyphasic taxonomic investigation. Functional experiments indicated a wide range of PGP activities: ten strains solubilized phosphate, eight produced siderophores, twelve synthesized indole-3-acetic acid, fourteen produced pectinases, six fungi exhibited antibacterial activity against Bacillus subtilis, and five inhibited Staphylococcus aureus. Furthermore, Trichoderma atroviride TR1-T2 and Xylaria multiplex XY1-D42 showed antagonistic activity against Phytopythium vexans, characterized by a contact-dependent displacement effect. Five strains were chosen for further research as orchid bioinoculants based on their PGP and antagonistic traits: Chaetomium cochliodes CH1-V10, Mucor pseudolusitanicus MU2-T6, Thelonectria veuillotiana TH1-T3, Trichoderma atroviride TR1-T2, and Xylaria multiplex XY1-D42. These endophytes have the potential to improve in vitro propagation and facilitate ex vitro acclimatization of orchids, highlighting their importance in sustainable orchid production. Full article

Cannabidiol (CBD) is a bioactive phytocannabinoid with considerable pharmacological potential. However, its limited aqueous solubility and high lipophilicity remain significant barriers to its broader pharmaceutical application. In this study, the enzymatic potential of selected filamentous fungi was investigated as a whole-cell biocatalytic platform for the regioselective functionalization of CBD. Sixteen fungal strains were screened, and thirteen microorganisms successfully transformed CBD into more polar derivatives. Four strains showing distinct and promising chromatographic profiles were selected for scale-up biotransformation and product isolation: Mucor hiemalis KCh W2, M. hiemalis AM 450, Isaria fumosorosea KCh J2, and Metarhizium robertsii MU4. Eight CBD derivatives were isolated and identified by UHPLC-DAD, NMR spectroscopy, and HRESI-MS, including hydroxylated, glycosylated, and methylglycosylated products. Among them, two metabolites, 2′-O-(4‴-O-methyl-β-D-glucopyranosyl)-cannabidiol and 2′-O-(4‴-O-methyl-β-D-glucopyranosyl)-5″-hydroxycannabidiol, are reported here as previously undescribed CBD derivatives. I. fumosorosea KCh J2 and M. robertsii MU4 demonstrated the ability to catalyse 4-O-methylglycosylation. An additional experiment using 2′-O-(β-D-glucopyranosyl)-cannabidiol as an intermediate supported a sequential pathway involving initial phenolic O-glycosylation followed by methylation of the sugar moiety. In silico analysis predicted reduced lipophilicity for the newly obtained derivatives compared with CBD; however, these computational results require experimental verification and should not be interpreted as evidence of improved aqueous solubility, bioavailability, or biological activity. These findings demonstrate that filamentous fungi are useful whole-cell biocatalysts for generating structurally diverse CBD derivatives with increased polarity and provide new compounds for future physicochemical and biological evaluation. Full article

This work examines the utilization of the natural product shilajit resin, sourced from the Himalayas, for the extraction of diverse components suitable to the synthesis of gold nanoparticles (AuNPs) and selenium nanoparticles (SeNPs). The study evaluated the extraction efficiency of Uro-A, a polar phenolic component, from shilajit samples utilizing various solvent systems, followed by the eco-friendly synthesis and characterization of AuNPs and SeNPs. The LC-MS/MS analysis demonstrated that the methanol/ethyl acetate (MeOH/EA) extract was particularly effective and contained the highest concentration of Uro-A. A robust positive association was discovered between Uro-A content in shilajit and the efficiency of nanoparticle production. Sample 2, with 0.002 ppm Uro-A, produced suboptimal yields (15% for AuNPs; 34% for SeNPs), while sample 1, with 2.504 ppm Uro-A, noticeably enhanced the yields to 90% (AuNPs) and 96% (SeNPs). The synthesized AuNPs and SeNPs were characterized using SEM, EDS, PSD, ZP, XRD, FTIR, and XPS techniques, demonstrating spherical particles with an average diameter of around 100 nm. XPS spectra confirmed the elemental form of the obtained AuNPs and SeNPs. Antimicrobial studies revealed that SeNPs exhibit moderate efficacy (MIC = 0.125–1 mg/mL) against bacteria (e.g., Bacillus subtilis, Staphylococcus aureus) and fungi (e.g., Penicillium italicum, Mucor mucedo), but higher in comparison to AuNPs (MIC 0.25–5 mg/mL). Full article

The aim of the study was to evaluate the physicochemical, microbiological, and biochemical quality of commercially available dry-aged beef produced in Poland, with particular emphasis on differences between the crust and the interior of steaks. Fourteen samples (11 rib-eye and 3 sirloin) from different producers were analysed. The colour parameters, pH, water activity, thiobarbituric acid reactive substances, water-holding capacity, basic chemical composition, texture, microbial counts, free amino acids, biogenic amines profiles, and consumer sensory quality were determined. Microbiological analyses covered total plate count, psychrotrophic bacteria, lactic acid bacteria, Enterobacteriaceae, Pseudomonas spp., Brochothrix thermosphacta, yeasts and Moulds, as well as the presence of Salmonella spp. and Listeria monocytogenes. Fungal species isolated from selected crust samples were identified using ITS rDNA sequencing. Significant variability among products was observed in colour (L*: 31.1–45.0), pH (5.3–6.7), and water activity (0.92–0.99). Compared with the interior, the crust exhibited higher lipid oxidation (TBARS up to 2.31 mg MDA/kg), higher microbial loads, and greater accumulation of biogenic amines, including tyramine, cadaverine, and putrescine. Rib-eye 6, Rib-eye 7, Rib-eye 8, Rib-eye 10, and Rib-eye 11 showed the highest sensory acceptance. On the crust of selected highly rated steaks filamentous fungi such as Mucor flavus and Thamnidium elegans were identified, which suggests environmental colonisation and potential technological relevance. Full article

Fungi are a promising source of biological control agents for the management of phytopathogens such as Cercospora apii, the causal agent of celery early blight. Exploring native fungal isolates associated with agroecosystems near celery production is essential for identifying biocontrol candidates and supporting sustainable, integrated disease management strategies. In this study, fungal isolates were obtained from leaves and soil samples collected across agricultural and natural environments and their antagonistic potential against C. apii was evaluated using in vitro assays. A total of 48 fungal isolates were screened for growth inhibition, of which 12 reduced pathogen colony size by more than 50% in vitro, representing five morphological and taxonomic groups: Aspergillus fumigatus, Fusarium spp., Mucor spp., Neopestalotiopsis sp. and Nigrospora sp. Notably, isolates exhibiting the highest antagonistic activity over time were predominantly derived from leaf samples (p < 0.0001). Two isolates, Mucor nidicola KX3187 and M. irregularis KX3197, consistently showed strong inhibition of C. apii in vitro (up to 85%), and M. nidicola significantly suppressed disease development in planta. This preliminary study identifies Mucor nidicola KX3187 as a potential biocontrol candidate that showed promising activity in greenhouse trials for celery early blight and provides a foundation for future studies to further evaluate its potential as a component of sustainable disease management strategies. Full article

Opportunistic infections are a growing concern in medical mycology. In that context, Mucor circinelloides is recognized as an etiological agent of emerging life-threatening infections in humans. Furthermore, this biomass-degrading species is important in the biotechnological context due to its potential for enzyme discovery. In this work, we describe an in silico pipeline for the comprehensive characterization of the secretome of this species. Our analyses suggest that M. circinelloides encodes a diverse enzymatic repertoire, including multiple carbohydrate-active enzymes (CAZymes). Functional characterization of this secreted protein set identified candidate proteins with potential relevance for industrial application and virulence-related processes. Importantly, we extended this framework by integrating a sequence-based machine-learning (ML) approach for the prediction of extracellular vesicle (EV)-associated proteins. Using a Random Forest model trained on high-confidence EV datasets, we predicted a subset of candidate proteins in M. circinelloides and explored their functional distribution. The predicted EV proteome displayed a degree of similarity to experimentally characterized human EV proteomes, suggesting that the model is able to capture sequence-derived predictive signals. Overall, our results support the potential of ML as a scalable strategy to be integrated into the study of fungal EVs. This approach provided a foundation for research aimed at experimentally validating EV cargo and refining predictive models. Beyond M. circinelloides, we provide a framework that may be useful for future studies on EV biology across diverse fungi of medical and biotechnological interest. Full article

The Bahía Blanca marshes are highly productive ecosystems that act as carbon sinks and support a diverse community of halophytic plants, including species of Distichlis, Spartina, Sarcocornia, among others. Marine fungi inhabit these ecosystems and play important roles in the decomposition of organic matter and the production of valuable biopolymers and metabolites. Despite their potential ecological and commercial importance, little is known about the identity and chemical profiles of these fungi associated with marine environments and halophytic plants in the Bahía Blanca estuary. To expand current knowledge of marine fungi in this system, three fungal species associated with marine waters and Sarcocornia perennis plants were isolated and identified: Aspergillus iizukae, Stemphylium sp. (Ascomycota), and Mucor sp. (Mucoromycota). Their biomass was analyzed to determine its biochemical and metabolic composition. Stemphylium sp. exhibited the highest protein (30.24 g/100 g dry mass) and lipid (2.65 g/100 g dry mass) contents, whereas Mucor sp. showed the highest levels of total sugars (26.13 g/100 g dry mass) and glucosamine (17.30 g/100 g dry mass). Aspergillus iizukae produced the greatest diversity of secondary metabolites. These findings provided a preliminary characterization of fungal species from this region and highlighted their potential for future biotechnological and industrial applications. Full article

Mucormycosis is a devastating invasive fungal infection primarily caused by Mucor and Rhizopus species, presenting significant clinical challenges due to limited therapeutic options and emerging drug resistance in opportunistic yeasts such as Candida albicans. This study explores foliar endophytic fungi from Thai medicinal plants as potential reservoirs for novel bioactive metabolites targeting both fungal growth and virulence factors. We report the first isolation of Fusarium proliferatum as an endophyte from Lantana camara L. foliage (voucher number 01562), with its identity confirmed through morphological characterization and sequencing of the fungal ITS4/ITS5 regions. Antifungal susceptibility testing showed potent activity against a panel of environmental Mucorales, with minimum inhibitory concentrations (MICs) ranging from 0.3 to 1 mg/L. In dual-culture assays, F. proliferatum demonstrated significant mycelial inhibition rates of 93.30% to 93.67% against Mucor spp. and 88.67% to 93.67% against Rhizopus spp. Furthermore, the crude extract exhibited a potent anti-virulence effect by suppressing the C. albicans yeast-to-hyphal transition, achieving up to 68% germination inhibition in resistant strains. Liquid chromatography–mass spectrometry (LC-MS) analysis identified 51 secondary metabolites, including the cyclic peptide beauvericin and various polyketides and indole derivatives. These findings suggest that F. proliferatum utilizes metabolic mimicry and adaptive synergy with its host plant to produce a diverse chemical arsenal. This study positions foliar endophytes of L. camara as promising candidates for the development of dual-action therapeutics to combat invasive and resistant mycoses. Full article

Autophagy is a central cellular process that recycles intracellular components and supplies precursors for biosynthesis. As a key regulator of autophagosome formation, autophagy-related protein 8 (ATG8) plays an essential role in macromolecular degradation and in the availability of lipid precursors. However, whether enhanced autophagic flux promotes lipid accumulation in oleaginous fungi remains unclear. In this study, atg8-1 and atg8-2 were homologously overexpressed in the oleaginous fungus Mucor circinelloides to evaluate their roles in lipid biosynthesis. The engineered strains McATG8-1T2 and McATG8-2T2 showed significantly increased total fatty acid (TFA) contents (32.9% and 32.5%), representing improvements of 15.0% and 13.7% compared with the control. γ-Linolenic acid levels were also elevated to 16.9% and 16.5%, relative increases of 25.2% and 22.0%, respectively. RT-qPCR analysis revealed coordinated upregulation of genes involved in autophagy, central carbon metabolism, lipid biosynthesis, and the pentose phosphate pathway. Ethanolamine supplementation further enhanced lipid accumulation, increasing TFA contents by 12.2–14.6%. In addition, inhibition of target of rapamycin complex 1 using rapamycin produced a strong synergistic effect with atg8 overexpression, leading to substantial lipid increases under nitrogen-limited and nitrogen-rich conditions. Collectively, these findings demonstrated that ATG8-mediated autophagy enhanced lipid accumulation and acted as a key determinant of lipid synthesis flux. Full article

Mucormycosis is a rare, invasive fungal infection associated with high mortality. This retrospective study evaluated adult mucormycosis cases followed in our clinic between 2015 and 2025. A total of 13 patients were included, with a mean age of 50.92 ± 20.65 years (range, 20–83), and 10 (76.9%) were male. The most frequent symptom was facial pain (100%). Four (30.8%) of the patients had rhino-sinusitis, and three (23%) had rhino-orbito-cerebral involvement. Seven (53.9%) of the patients had hematological malignancy, three (23%) had diabetes mellitus (DM), two (15.4%) had a history of COVID-19 pneumonia, and one (7.7%) had a history of both DM and COVID-19 pneumonia. All had elevated C-reactive protein levels. Rhizopus spp. grew in nasal/tissue cultures of three (23%) patients, and so did Mucor spp. Surgery was performed in 11 (84.6%) patients, and fungal hyphae were observed in tissue histopathology. All patients showed radiological findings of mucormycosis on imaging. All patients received Liposomal Amphotericin B, and nine (69.2%) patients received sequential posaconazole therapy. Recurrence occurred in two (15.4%) patients. A total of eight (61.5%) patients, including three (23%) patients with intracranial involvement, died. Mucormycosis is a severe infection, especially in patients with hematological malignancies or DM, despite early diagnosis and combined antifungal and surgical treatments. Full article

The cell wall (CW) of Mucoromycota has a unique chitin/chitosan complex, unlike chitin/glucan complex in Ascomycota. Under cell wall stress (CWS), induced by azo dyes, ascomycetes increase the amount of CW chitin. This study analyzes the response of Mucor flavus to CWS, induced by Congo red and Calcofluor white. It was found that azo dyes significantly reduced the biomass yield and inhibited apical growth and branching but did not lead to an increase in the amount of CW chitin/chitosan, neutral polysacchrides and cytosol osmolytes. Non-bilayer phosphatidic acids and phosphatidylethanolamines dominated in the control membrane lipids, but the proportion of bilayer phosphatidylcholines did not exceed 5%. Under CWS, the proportion of phosphatidic acids increased, while the proportion of phosphatidylethanolamines decreased and the degree of unsaturation of phospholipids increased. Storage lipids in the control were represented by mono-, di- and triacylglycerides and free fatty acids. Under CWS, the proportion of diacylglycerides increased significantly, while the proportion of triacylglycerides decreased. Thus, the CWS response of M. flavus consisted of significant changes in growth and the composition of membrane and storage lipids, but the amount of CW chitin/chitosan and cytosol osmolytes did not increase, which is different from the response of ascomycetes. Full article

Mucoralean fungi are mostly saprotrophic. During a fungal investigation of soil in Guangdong and Anhui provinces of China, five new species of Mucorales were discovered, namely Cunninghamella brevispora sp. nov., C. geminata sp. nov., Mucor chlamydosporiferus sp. nov., M. citrinus sp. nov., and M. magnisporus sp. nov. The identification is based on morphological characteristics, as well as molecular phylogenetics of the internal transcribed spacer (ITS), large subunit ribosomal RNA gene (LSU rDNA), translation elongation factor 1-alpha gene (TEF1α), and RNA polymerase II largest subunit gene (RPB1). Cunninghamella brevispora sp. nov. is sister to C. guizhouensis, and is distinguished by short sporangiophores. Cunninghamella geminata sp. nov. is sister to C. subclavata; rhizoids are absent in the former but well-developed in the latter. Mucor chlamydosporiferus sp. nov. is closely related to M. prayagensis, and is characterized by abundant chlamydospores. Mucor citrinus sp. nov. is closely related to M. paraorantomantidis, and is differentiated by pale yellow sporangiospores. Mucor magnisporus sp. nov. is sister to M. merdicola, and is discriminated by large sporangiospores. To date, with the addition of the five new species described herein, the total number of accepted species in the genus Cunninghamella and Mucor has increased to 49 and 163, respectively. Full article

Seed-associated endophytes become active during germination, playing important roles as early colonizers of plant tissues and contributing to plant health while residing in a protective niche. In this study, we characterized a wheat-derived bacterial isolate, JunSE1L, to determine its functional traits and ecological role in the plant microbiome. The isolate was identified as Bacillus atrophaeus based on 16S rRNA analysis. JunSE1L exhibited nutrient-dependent plasticity in colony architecture, forming robust hydrophobic biofilms and pellicles under rich nutrient availability while swarming and forming thin, often dendritic colonies under defined nutrition. JunSE1L produced highly surface-active compounds that lowered the surface tension of water to 30 mN/m and released potent proteolytic and hemolytic compounds, thus equipping JunSE1L for antagonistic interactions, as examined against several fungal pathogens. JunSE1L inhibited Fusarium proliferatum and Mucor hiemalis in live-cell assays, while cell-free supernatant selectively inhibited M. hiemalis. JunSE1L was recovered from multiple plant compartments, including rhizosphere, rhizoplane, and aerial tissues, and was observed to emerge from cut plant tissues, supporting seed-endophyte mobilization upon germination to colonize distal tissues. Seed surface inoculation experiments with JunSE1L showed limited attachment at low cell densities and reduced seedling vigor at higher inoculum levels, indicating that inoculum density and native microbiome interactions influence seedling performance. Full article