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3 pages, 778 KiB  
Correction
Correction: Drif et al. Anti-Inflammatory and Cancer-Preventive Potential of Chamomile (Matricaria chamomilla L.): A Comprehensive In Silico and In Vitro Study. Biomedicines 2024, 12, 1484
by Assia I. Drif, Rümeysa Yücer, Roxana Damiescu, Nadeen T. Ali, Tobias H. Abu Hagar, Bharati Avula, Ikhlas A. Khan and Thomas Efferth
Biomedicines 2025, 13(7), 1595; https://doi.org/10.3390/biomedicines13071595 - 30 Jun 2025
Viewed by 254
Abstract
There was an error in the original publication [...] Full article
(This article belongs to the Section Drug Discovery, Development and Delivery)
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36 pages, 8405 KiB  
Article
Anti-Inflammatory and Cancer-Preventive Potential of Chamomile (Matricaria chamomilla L.): A Comprehensive In Silico and In Vitro Study
by Assia I. Drif, Rümeysa Yücer, Roxana Damiescu, Nadeen T. Ali, Tobias H. Abu Hagar, Bharati Avula, Ikhlas A. Khan and Thomas Efferth
Biomedicines 2024, 12(7), 1484; https://doi.org/10.3390/biomedicines12071484 - 5 Jul 2024
Cited by 3 | Viewed by 7005 | Correction
Abstract
Background and aim: Chamomile tea, renowned for its exquisite taste, has been appreciated for centuries not only for its flavor but also for its myriad health benefits. In this study, we investigated the preventive potential of chamomile (Matricaria chamomilla L.) towards cancer [...] Read more.
Background and aim: Chamomile tea, renowned for its exquisite taste, has been appreciated for centuries not only for its flavor but also for its myriad health benefits. In this study, we investigated the preventive potential of chamomile (Matricaria chamomilla L.) towards cancer by focusing on its anti-inflammatory activity. Methods and results: A virtual drug screening of 212 phytochemicals from chamomile revealed β-amyrin, β-eudesmol, β-sitosterol, apigenin, daucosterol, and myricetin as potent NF-κB inhibitors. The in silico results were verified through microscale thermophoresis, reporter cell line experiments, and flow cytometric determination of reactive oxygen species and mitochondrial membrane potential. An oncobiogram generated through comparison of 91 anticancer agents with known modes of action using the NCI tumor cell line panel revealed significant relationships of cytotoxic chamomile compounds, lupeol, and quercetin to microtubule inhibitors. This hypothesis was verified by confocal microscopy using α-tubulin-GFP-transfected U2OS cells and molecular docking of lupeol and quercetin to tubulins. Both compounds induced G2/M cell cycle arrest and necrosis rather than apoptosis. Interestingly, lupeol and quercetin were not involved in major mechanisms of resistance to established anticancer drugs (ABC transporters, TP53, or EGFR). Performing hierarchical cluster analyses of proteomic expression data of the NCI cell line panel identified two sets of 40 proteins determining sensitivity and resistance to lupeol and quercetin, further pointing to the multi-specific nature of chamomile compounds. Furthermore, lupeol, quercetin, and β-amyrin inhibited the mRNA expression of the proinflammatory cytokines IL-1β and IL6 in NF-κB reporter cells (HEK-Blue Null1). Moreover, Kaplan–Meier-based survival analyses with NF-κB as the target protein of these compounds were performed by mining the TCGA-based KM-Plotter repository with 7489 cancer patients. Renal clear cell carcinomas (grade 3, low mutational rate, low neoantigen load) were significantly associated with shorter survival of patients, indicating that these subgroups of tumors might benefit from NF-κB inhibition by chamomile compounds. Conclusion: This study revealed the potential of chamomile, positioning it as a promising preventive agent against inflammation and cancer. Further research and clinical studies are recommended. Full article
(This article belongs to the Special Issue Anticancer Activity and Metabolic Pathways of Natural Products 2.0)
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25 pages, 6131 KiB  
Article
COX2-Inhibitory and Cytotoxic Activities of Phytoconstituents of Matricaria chamomilla L.
by Assia I. Drif, Bharathi Avula, Ikhlas A. Khan and Thomas Efferth
Appl. Sci. 2023, 13(15), 8935; https://doi.org/10.3390/app13158935 - 3 Aug 2023
Cited by 3 | Viewed by 2409
Abstract
Chamomile tea is a popular beverage and herbal remedy with various health benefits, including antioxidant and antimicrobial activities and beneficial effects on metabolism. In this study, we investigated the inhibitory activities of secondary metabolites from Matricaria chamomile L. against COX2, an enzyme involved [...] Read more.
Chamomile tea is a popular beverage and herbal remedy with various health benefits, including antioxidant and antimicrobial activities and beneficial effects on metabolism. In this study, we investigated the inhibitory activities of secondary metabolites from Matricaria chamomile L. against COX2, an enzyme involved in inflammation and linked to cancer development. The cytotoxicity of the compounds was also evaluated on a panel of 60 cancer cell lines. Myricetin, one of the COX2-inhibiting and cytotoxic compounds in chamomile tea, was further studied to determine a proteomic expression profile that predicts the sensitivity or resistance of tumor cell lines to this compound. The expression of classical mechanisms of anticancer drug resistance did not affect the responsiveness of cancer cells to myricetin, e.g., ATP-binding cassette (ABC) transporters (ABCB, ABCB5, ABCC1, ABCG2), tumor suppressors (p53, WT1), and oncogenes (EGFR, RAS), whereas significant correlations between myricetin responsiveness and GSTP expression and cellular proliferation rates were observed. Additionally, Kaplan–Meier survival time analyses revealed that high COX2 expression is associated with a worse survival prognosis in renal clear cell carcinoma patients, suggesting a potential utility for COX2 inhibition by myricetin in this tumor type. Overall, this study provides insight into the molecular modes of action of chamomile secondary metabolites and their potential as cancer-preventive or therapeutic agents. Full article
(This article belongs to the Special Issue Natural Compound and Cellular Mode of Action)
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21 pages, 4563 KiB  
Article
The Study of Cu(II) Adsorption onto Synthetically Modified Geopolymers
by Matej Šuránek, Zuzana Melichová, Miljana M. Mirković, Marija Ivanović, Vladimir B. Pavlović, Ljiljana Kljajević and Snežana Nenadović
Sustainability 2023, 15(4), 2869; https://doi.org/10.3390/su15042869 - 5 Feb 2023
Cited by 6 | Viewed by 2066
Abstract
The study of Cu(II) from aqueous solutions using the adsorption process on synthetically modified geopolymers was performed under static conditions. Three geopolymers (based on metaphase of Serbian clay, metaphase of German clay and metaphase of German clay plus 10% of carbon cloth) were [...] Read more.
The study of Cu(II) from aqueous solutions using the adsorption process on synthetically modified geopolymers was performed under static conditions. Three geopolymers (based on metaphase of Serbian clay, metaphase of German clay and metaphase of German clay plus 10% of carbon cloth) were used. The geopolymers were made by condensing a mixture of metaphases and alkali activator solution at a fixed ratio at room temperature and then at a temperature of 60 °C in a dry oven. Then, the geopolymer samples were pre-crashed to a fixed-radius size. Their properties were characterized by X-ray diffractometry (XRD), Diffuse Reflectance Infrared Fourier Transform (DRIFT) analysis and Scanning Electron Microscopy (SEM) with Energy Dispersive Spectroscopy (EDS). Adsorption experiments were carried out under batch process as a function of the dose, concentration of metal, and contact time. The uptake of Cu(II) was rapid, and it increased with increasing metal concentration. The sorption percentage decreased with increasing concentration of Cu(II). The equilibrium adsorption capacity of geopolymers was measured and extrapolated using more isotherms. The data fit very well the linear Langmuir isotherm model. The pseudo-second-order kinetic model can well describe the adsorption behavior of Cu(II) ions with geopolymers samples. These results show that used geopolymers hold great potential to remove Cu(II) from industrial wastewater. Full article
(This article belongs to the Section Sustainable Materials)
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22 pages, 6985 KiB  
Article
Identification of Gedunin from a Phytochemical Depository as a Novel Multidrug Resistance-Bypassing Tubulin Inhibitor of Cancer Cells
by Sami A. Khalid, Mona Dawood, Joelle C. Boulos, Monica Wasfi, Assia Drif, Faranak Bahramimehr, Nasim Shahhamzehei, Letian Shan and Thomas Efferth
Molecules 2022, 27(18), 5858; https://doi.org/10.3390/molecules27185858 - 9 Sep 2022
Cited by 9 | Viewed by 2878
Abstract
The chemotherapy of tumors is frequently limited by the development of resistance and severe side effects. Phytochemicals may offer promising candidates to meet the urgent requirement for new anticancer drugs. We screened 69 phytochemicals, and focused on gedunin to analyze its molecular modes [...] Read more.
The chemotherapy of tumors is frequently limited by the development of resistance and severe side effects. Phytochemicals may offer promising candidates to meet the urgent requirement for new anticancer drugs. We screened 69 phytochemicals, and focused on gedunin to analyze its molecular modes of action. Pearson test-base correlation analyses of the log10IC50 values of 55 tumor cell lines of the National Cancer Institute (NCI), USA, for gedunin with those of 91 standard anticancer agents revealed statistically significant relationships to all 10 tested microtubule inhibitors. Thus, we hypothesized that gedunin may be a novel microtubule inhibitor. Confocal microscopy, cell cycle measurements, and molecular docking in silico substantiated our assumption. Agglomerative cluster analyses and the heat map generation of proteomic data revealed a subset of 40 out of 3171 proteins, the expression of which significantly correlated with sensitivity or resistance for the NCI cell line panel to gedunin. This indicates the complexity of gedunin’s activity against cancer cells, underscoring the value of network pharmacological techniques for the investigation of the molecular modes of drug action. Finally, we correlated the transcriptome-wide mRNA expression of known drug resistance mechanism (ABC transporter, oncogenes, tumor suppressors) log10IC50 values for gedunin. We did not find significant correlations, indicating that gedunin’s anticancer activity might not be hampered by classical drug resistance mechanisms. In conclusion, gedunin is a novel microtubule-inhibiting drug candidate which is not involved in multidrug resistance mechanisms such as other clinically established mitotic spindle poisons. Full article
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14 pages, 904 KiB  
Article
MIGAN: Mutual-Interaction Graph Attention Network for Collaborative Filtering
by Ahlem Drif and Hocine Cherifi
Entropy 2022, 24(8), 1084; https://doi.org/10.3390/e24081084 - 5 Aug 2022
Cited by 12 | Viewed by 2944
Abstract
Many web platforms now include recommender systems. Network representation learning has been a successful approach for building these efficient recommender systems. However, learning the mutual influence of nodes in the network is challenging. Indeed, it carries collaborative signals accounting for complex user-item interactions [...] Read more.
Many web platforms now include recommender systems. Network representation learning has been a successful approach for building these efficient recommender systems. However, learning the mutual influence of nodes in the network is challenging. Indeed, it carries collaborative signals accounting for complex user-item interactions on user decisions. For this purpose, in this paper, we develop a Mutual Interaction Graph Attention Network “MIGAN”, a new algorithm based on self-supervised representation learning on a large-scale bipartite graph (BGNN). Experimental investigation with real-world data demonstrates that MIGAN compares favorably with the baselines in terms of prediction accuracy and recommendation efficiency. Full article
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28 pages, 2125 KiB  
Review
Diabetes-Modifying Antirheumatic Drugs: The Roles of DMARDs as Glucose-Lowering Agents
by Marco Infante, Nathalia Padilla, Rodolfo Alejandro, Massimiliano Caprio, David Della-Morte, Andrea Fabbri and Camillo Ricordi
Medicina 2022, 58(5), 571; https://doi.org/10.3390/medicina58050571 - 21 Apr 2022
Cited by 8 | Viewed by 8681
Abstract
Systemic inflammation represents a shared pathophysiological mechanism which underlies the frequent clinical associations among chronic inflammatory rheumatic diseases (CIRDs), insulin resistance, type 2 diabetes (T2D), and chronic diabetes complications, including cardiovascular disease. Therefore, targeted anti-inflammatory therapies are attractive and highly desirable interventions to [...] Read more.
Systemic inflammation represents a shared pathophysiological mechanism which underlies the frequent clinical associations among chronic inflammatory rheumatic diseases (CIRDs), insulin resistance, type 2 diabetes (T2D), and chronic diabetes complications, including cardiovascular disease. Therefore, targeted anti-inflammatory therapies are attractive and highly desirable interventions to concomitantly reduce rheumatic disease activity and to improve glucose control in patients with CIRDs and comorbid T2D. Therapeutic approaches targeting inflammation may also play a role in the prevention of prediabetes and diabetes in patients with CIRDs, particularly in those with traditional risk factors and/or on high-dose corticosteroid therapy. Recently, several studies have shown that different disease-modifying antirheumatic drugs (DMARDs) used for the treatment of CIRDs exert antihyperglycemic properties by virtue of their anti-inflammatory, insulin-sensitizing, and/or insulinotropic effects. In this view, DMARDs are promising drug candidates that may potentially reduce rheumatic disease activity, ameliorate glucose control, and at the same time, prevent the development of diabetes-associated cardiovascular complications and metabolic dysfunctions. In light of their substantial antidiabetic actions, some DMARDs (such as hydroxychloroquine and anakinra) could be alternatively termed “diabetes-modifying antirheumatic drugs”, since they may be repurposed for co-treatment of rheumatic diseases and comorbid T2D. However, there is a need for future randomized controlled trials to confirm the beneficial metabolic and cardiovascular effects as well as the safety profile of distinct DMARDs in the long term. This narrative review aims to discuss the current knowledge about the mechanisms behind the antihyperglycemic properties exerted by a variety of DMARDs (including synthetic and biologic DMARDs) and the potential use of these agents as antidiabetic medications in clinical settings. Full article
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18 pages, 3246 KiB  
Article
In Silico and In Vitro Screening of 50 Curcumin Compounds as EGFR and NF-κB Inhibitors
by Mohamed E. M. Saeed, Rümeysa Yücer, Mona Dawood, Mohamed-Elamir F. Hegazy, Assia Drif, Edna Ooko, Onat Kadioglu, Ean-Jeong Seo, Fadhil S. Kamounah, Salam J. Titinchi, Beatrice Bachmeier and Thomas Efferth
Int. J. Mol. Sci. 2022, 23(7), 3966; https://doi.org/10.3390/ijms23073966 - 2 Apr 2022
Cited by 28 | Viewed by 5151
Abstract
The improvement of cancer chemotherapy remains a major challenge, and thus new drugs are urgently required to develop new treatment regimes. Curcumin, a polyphenolic antioxidant derived from the rhizome of turmeric (Curcuma longa L.), has undergone extensive preclinical investigations and, thereby, displayed [...] Read more.
The improvement of cancer chemotherapy remains a major challenge, and thus new drugs are urgently required to develop new treatment regimes. Curcumin, a polyphenolic antioxidant derived from the rhizome of turmeric (Curcuma longa L.), has undergone extensive preclinical investigations and, thereby, displayed remarkable efficacy in vitro and in vivo against cancer and other disorders. However, pharmacological limitations of curcumin stimulated the synthesis of numerous novel curcumin analogs, which need to be evaluated for their therapeutic potential. In the present study, we calculated the binding affinities of 50 curcumin derivatives to known cancer-related target proteins of curcumin, i.e., epidermal growth factor receptor (EGFR) and nuclear factor κB (NF-κB) by using a molecular docking approach. The binding energies for EGFR were in a range of −12.12 (±0.21) to −7.34 (±0.07) kcal/mol and those for NF-κB ranged from −12.97 (±0.47) to −6.24 (±0.06) kcal/mol, indicating similar binding affinities of the curcumin compounds for both target proteins. The predicted receptor-ligand binding constants for EGFR and curcumin derivatives were in a range of 0.00013 (±0.00006) to 3.45 (±0.10) µM and for NF-κB in a range of 0.0004 (±0.0003) to 10.05 (±4.03) µM, indicating that the receptor-ligand binding was more stable for EGFR than for NF-κB. Twenty out of 50 curcumin compounds showed binding energies to NF-κB smaller than −10 kcal/mol, while curcumin as a lead compound revealed free binding energies of >−10 kcal/mol. Comparable data were obtained for EGFR: 15 out of 50 curcumin compounds were bound to EGFR with free binding energies of <−10 kcal/mol, while the binding affinity of curcumin itself was >−10 kcal/mol. This indicates that the derivatization of curcumin may indeed be a promising strategy to improve targe specificity and to obtain more effective anticancer drug candidates. The in silico results have been exemplarily validated using microscale thermophoresis. The bioactivity has been further investigated by using resazurin cell viability assay, lactate dehydrogenase assay, flow cytometric measurement of reactive oxygen species, and annexin V/propidium iodide assay. In conclusion, molecular docking represents a valuable approach to facilitate and speed up the identification of novel targeted curcumin-based drugs to treat cancer. Full article
(This article belongs to the Special Issue Curcumin in Health and Disease 3.0)
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14 pages, 2209 KiB  
Review
Radial or Bilateral? The Molecular Basis of Floral Symmetry
by Francesca Lucibelli, Maria Carmen Valoroso and Serena Aceto
Genes 2020, 11(4), 395; https://doi.org/10.3390/genes11040395 - 6 Apr 2020
Cited by 15 | Viewed by 10700
Abstract
In the plant kingdom, the flower is one of the most relevant evolutionary novelties. Floral symmetry has evolved multiple times from the ancestral condition of radial to bilateral symmetry. During evolution, several transcription factors have been recruited by the different developmental pathways in [...] Read more.
In the plant kingdom, the flower is one of the most relevant evolutionary novelties. Floral symmetry has evolved multiple times from the ancestral condition of radial to bilateral symmetry. During evolution, several transcription factors have been recruited by the different developmental pathways in relation to the increase of plant complexity. The MYB proteins are among the most ancient plant transcription factor families and are implicated in different metabolic and developmental processes. In the model plant Antirrhinum majus, three MYB transcription factors (DIVARICATA, DRIF, and RADIALIS) have a pivotal function in the establishment of floral dorsoventral asymmetry. Here, we present an updated report of the role of the DIV, DRIF, and RAD transcription factors in both eudicots and monocots, pointing out their functional changes during plant evolution. In addition, we discuss the molecular models of the establishment of flower symmetry in different flowering plants. Full article
(This article belongs to the Special Issue Genetic Mechanisms Underpinning Floral Architecture)
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18 pages, 4866 KiB  
Article
Total Oxidation of Dichloromethane over Silica Modified Alumina Catalysts Washcoated on Ceramic Monoliths
by Zouhair El Assal, Satu Ojala, Asmaa Drif, Mohamed Zbair, Mohammed Bensitel, Laurence Pirault-Roy, Tuomas Nevanperä, Satu Pitkäaho, Riitta L. Keiski and Rachid Brahmi
Catalysts 2018, 8(8), 339; https://doi.org/10.3390/catal8080339 - 20 Aug 2018
Cited by 8 | Viewed by 4931
Abstract
Silica modified alumina was used in this study for coating of a cordierite monolith substrate with two different channel densities. The performance of the prepared monolith catalysts was evaluated in catalytic total oxidation of dichloromethane before and after Pt impregnation. The characteristics similar [...] Read more.
Silica modified alumina was used in this study for coating of a cordierite monolith substrate with two different channel densities. The performance of the prepared monolith catalysts was evaluated in catalytic total oxidation of dichloromethane before and after Pt impregnation. The characteristics similar to the powder form catalysts were kept rather successfully after washcoating the monolith as evidenced by electron microscopy (FESEM) and N2 physisorption. A dichloromethane (DCM) conversion of higher than 80% at 500 °C was reached over all the catalysts with 200 cpsi. The maximum conversion was obtained with the catalyst containing 10 mol % of silica. The total amount of major byproducts (CO, CH3Cl and CH2O) were slightly decreased by increasing the silica loading, and remarkably after Pt impregnation. After impregnation of Pt, the HCl yields were increased for two samples with the higher loading of silica (10 and 15 mol %) and reached the maximum when silica loading was 10%. Even though Pt impregnation did not significantly affect the DCM conversion, it improved the selectivity. Comparison between the two substrates (200 and 600 cpsi) evidenced that the key parameters of the monolith influencing the DCM oxidation are low value of open fraction area, hydraulic diameter, thermal integrity factor and high value of mechanical integrity factor and geometric surface area. Full article
(This article belongs to the Special Issue Catalysts for Oxidative Destruction of Volatile Organic Compounds)
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17 pages, 7573 KiB  
Article
Recovery of Residual Silver-Bearing Minerals from Low-Grade Tailings by Froth Flotation: The Case of Zgounder Mine, Morocco
by Boujemaa Drif, Yassine Taha, Rachid Hakkou and Mostafa Benzaazoua
Minerals 2018, 8(7), 273; https://doi.org/10.3390/min8070273 - 27 Jun 2018
Cited by 15 | Viewed by 7620
Abstract
The need to explore more complex and low-grade silver ores and to develop novel and cost-effective processes to recover silver from waste is becoming an important challenge. This paper aims to characterize old, low-grade, silver tailings generated by the former Zgounder silver mine, [...] Read more.
The need to explore more complex and low-grade silver ores and to develop novel and cost-effective processes to recover silver from waste is becoming an important challenge. This paper aims to characterize old, low-grade, silver tailings generated by the former Zgounder silver mine, located in Morocco. Understanding the mineralogical composition, particularly the silver deportment, was critical to allow the recovery of silver from these tailings. More than 88 samples of low grade tailings were sampled and characterized using chemical and mineralogical techniques. Froth flotation was used to recover silver bearing minerals using a combination of different collectors (dithiophosphate, dialkyl dithiophosphinates, Aero 7518, Aero 7640, alkyl dithiophosphates and potassium butyl-xanthate). The main goal was to optimize the flotation process at a laboratory scale through the testing of different parameters, such as collectors and frother types and dosage, activators and sulphidizing agents, and pH conditions. The characterization results showed that silver content varied between 30 and 440 ppm with an overall average content of 148 ppm. Silver occurs mainly in the form of native silver as well as in association with sulphides, such as acanthite and pyrite. Minor amounts of sphalerite, chalcopyrite, arsenopyrite, and hematite were identified. The flotation results showed the following optimum conditions: particle size of 63 µm, conditioning pH of 8.5, a combination of butyl-xanthate and dithiophosphate as collectors at a dosage of 80 g/t each, a concentration of 200 g/t of the activating agent (CuSO4), 30 g/t of methyl isobutyl carbonyl (MIBC) frother and a duration time of 8 min with slow kinetics. With these optimal conditions, it was possible to achieve a maximum silver recovery yield of 84% with 1745 ppm Ag grade to be cyanided. Moreover, the environmental behavior of the final clean tailings was demonstrated to be inert using Toxicity characteristic leaching procedure (TCLP) leaching tests. Full article
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