Search Results (9)

The Alaskan (highbrow) sculpin, Triglops metopias, is a rare and poorly known species with a restricted distribution in the North Pacific. This species has been previously recorded only from off the Aleutian Islands and the Gulf of Alaska, while previous records from the western North Pacific have been controversial. The presence of T. metopias in the northwestern Pacific off the Kuril Islands is confirmed in the current study. Forty-one specimens were included in morphological and molecular analyses, including principal component analysis and DNA barcoding. The detailed morphological description of the Kuril Islands specimens is given. Molecular analysis inferred from the mitochondrial cytochrome b sequences showed no separation of this species from T. pingelii, although they can be distinguished by external morphology, including the use of the multivariate statistical approach. The geographical distribution of T. metopias in the North Pacific is discussed. This species is considered to be a recently diverged species with a disjunct distribution from the Kuril and the Aleutian Islands eastwards to the Gulf of Alaska. Despite its morphological similarity to T. pingelii, both species can be distinguished by a combination of meristic and morphometric characters, in particular, the wider interorbital space (10.4–22.4, mean 14.8 vs. 6.9–11.4, mean 9.2), shorter pectoral fins (18.7–24.9, mean 21.0 vs. 21.7–27.4, mean 24.1), and the on average more numerous oblique dermal folds (92 vs. 54). Full article

The geographic ranges of slimy (Uranidea cognata) and mottled (Uranidea bairdii) sculpin overlap broadly across cool and coldwater streams and rivers in North America, where they can serve very important roles in fish community dynamics. The diet diversities of slimy and mottled sculpin were examined in early March (late winter) during eight out of nine years after the August 2007 catastrophic flooding in four streams to assess potential diet shifts as benthic invertebrate prey communities recovered post-flood. In total, 10,823 prey items, representing 39 invertebrate taxa and three fish taxa were identified from the stomachs of 532 slimy sculpins (present in Garvin Brook, Gilmore Creek, and Trout Run) and 179 mottled sculpins (present in Middle Fork Whitewater River). Only four prey taxa were consumed by sculpin in all streams: midge larvae and pupae (Diptera: Chironomidae), blackfly larvae and pupae (Diptera: Simuliidae), Hydropsyche caddisfly larvae (Trichoptera: Hydropsychidae), and Baetis mayfly nymphs (Ephemeroptera: Baetidae). Midges dominated diets of both slimy (61% of prey by number) and mottled (76%) sculpin across all years. Consequently, Shannon diversities of diets were typically low across all years and streams for slimy sculpin (annual site range 0.07–0.83) and across years for mottled sculpin (annual range 0.11–0.46). Diversities and taxa richness of slimy sculpin diets increased in Garvin Brook and Trout Run across the study years (driven by significant declines in midge dominance) but remained relatively unchanged for slimy sculpin in Gilmore Creek and mottled sculpin in the Middle Fork. Individual slimy and mottled sculpin differed significantly both in the numbers of taxa consumed per fish (<2 versus 2.5 taxa/fish, respectively) and in the numbers of individual prey per fish (11 versus 26 prey, respectively). Slimy sculpin in two streams displayed modest shifts in diets as benthic prey communities recovered during the 9-year period post-flood, whereas slimy and mottled sculpin in other streams displayed little to no changes in diets. Differing flood severity among streams may have produced the different responses observed in sculpin diets. Full article

Alcichthys elongatus is the only species in the genus, and this work is the first to provide a comprehensive mitogenome analysis of this species. The A. elongatus mitogenome was 16,712 bp long, with biased A + T content (52.33%), and featured thirteen protein-coding genes (PCGs), twenty-two tRNAs, two rRNAs, and the control region (D-loop). The H strand encoded twenty-eight genes (twelve PCGs, fourteen tRNA, and two rRNA) and the control region, whereas the L strand encoded the remaining nine genes (ND6 and eight tRNA). Except for COXI, which started with GTG, all PCG sequences started with ATG and ended with TAA (ND4L, ND5, COXI, ATP8) or TAG (ND1, ND6) termination codons, with some (ND2, ND3, ND4, COXII, COXIII, ATP6, Cytb) having an incomplete termination codon. Except for tRNA-serine-1 (trnS), the majority of the tRNAs exhibited characteristic cloverleaf secondary structures. Based on 13 PCGs, phylogenetic analysis placed A. elongatus in the same clade as Icelus spatula. This genomic data will be useful for species identification, phylogenetic analysis, and population genetics. Full article

Coldwater streams are crucial habitats for many biota including Salmonidae and Cottidae species that are unable to tolerate warmer water temperatures. Accurate classification of coldwater streams is essential for their conservation, restoration, and management, especially in light of increasing human disturbance and climate change. Coldwater streams receive cooler groundwater inputs and, as a result, typically remain ice-free during the winter. Based on this empirical thermal evidence, we examined the potential of very high-resolution (VHR) satellite and uncrewed aerial system (UAS) imagery to (i) detect coldwater streams using semi-automatic classification versus visual interpretation approaches, (ii) examine the physical factors that contribute to inaccuracies in detecting coldwater habitats, and (iii) use the results to identify inaccuracies in existing thermal stream classification datasets and recommend coverage updates. Due to complex site conditions, semi-automated classification was time consuming and produced low mapping accuracy, while visual interpretation produced better results. VHR imagery detected only the highest quality coldwater streams while lower quality streams that still met the thermal and biological criteria to be classified as coldwater remained undetected. Complex stream and site variables (narrow stream width, canopy cover, terrain shadow, stream covered by ice and drifting snow), image quality (spatial resolution, solar elevation angle), and environmental conditions (ambient temperature prior to image acquisition) make coldwater detection challenging; however, UAS imagery is uniquely suited for mapping very narrow streams and can bridge the gap between field data and satellite imagery. Field-collected water temperatures and stream habitat and fish community inventories may be necessary to overcome these challenges and allow validation of remote sensing results. We detected >30 km of coldwater streams that are currently misclassified as warmwater. Overall, visual interpretation of VHR imagery it is a relatively quick and inexpensive approach to detect the location and extent of coldwater stream resources and could be used to develop field monitoring programs to confirm location and extent of coldwater aquatic resources. Full article

The features of the spatial and vertical distributions, and size–age and size–sex structures of the ribbed sculpin Triglops pingelii of the Kara Sea are presented. In September 2019, this species was recorded at depths from 18 to 235 m at a bottom temperature from −1.5 to +1.6 °C. The densest concentrations were recorded northeastward of the Yamal Peninsula, at the outlet of the Gulf of Ob at a depth of 18–21 m and a bottom temperature from −1.5 to −1.0 °C. Individuals with a length of 46–126 mm and a body weight of 0.35–15.60 g aged 1+ to 4+ years were recorded in trawl catches. However, fish with a length of 51–90 mm and a body weight < 6 g aged 1+–2+ years dominated. Among fish > 71 mm long, the proportion of females increased sharply, reaching 100% with a length of 120 mm. The individual fecundity of female ribbed sculpins in the Kara Sea with a length of 89–123 mm varied from 100 to 316 (on average 215 ± 15) eggs. It is shown that this species is a necto-bentho-ichthyophage whose main prey are benthic and bentho-pelagic crustaceans (mainly amphipods and mysids), as well as juveniles of various fish, the total proportion of which is >99% of the food weight. In this sculpin, age-related changes in the diet composition are well expressed, i.e., as the size increases, the relative importance of the former prey group decreases sharply, and that of the latter two groups, on the contrary, increases. A comparative analysis of data on the biology and distribution of the six most abundant or common Triglops spp. makes it possible to attribute the ribbed sculpin to medium-sized representatives of the genus, whose maximum length is similar to those of T. jordani from the North Pacific, as well as T. murrayi and T. nibelyni from the Arctic. The lifespan of the ribbed sculpin is within the same limits as reported for other Triglops spp. Its individual fecundity in the Arctic seas is comparable to that of other Triglops species living here, but is significantly lower than that of individuals of this species and other congeners from the northwest Pacific Ocean. Full article

When multiple species of fish coexist there are a host of potential ways through which they may interact, yet there is often a strong focus on studies of single species without considering these interactions. For example, many studies of forestry–stream interactions in the Pacific Northwest have focused solely on the most prevalent species: Coastal cutthroat trout. To examine the potential for interactions of other fishes with coastal cutthroat trout, we conducted an analysis of 281 sites in low order streams located on Washington’s Olympic Peninsula and along the central Oregon coast. Coastal cutthroat trout and juvenile coho salmon were the most commonly found salmonid species within these streams and exhibited positive associations with each other for both presence and density. Steelhead were negatively associated with the presence of coastal cutthroat trout as well as with coho salmon and sculpins (Cottidae). Coastal cutthroat trout most frequently shared streams with juvenile coho salmon. For densities of these co-occurring species, associations between these two species were relatively weak compared to the strong influences of physical stream conditions (size and gradient), suggesting that physical conditions may have more of an influence on density than species interactions. Collectively, our analysis, along with a review of findings from prior field and laboratory studies, suggests that the net effect of interactions between coastal cutthroat trout and coho salmon do not appear to inhibit their presence or densities in small streams along the Pacific Northwest. Full article

Sculpin fishes belonging to the family Cottidae represent a large and complex group, inhabiting a wide range of freshwater, brackish-water, and marine environments. Numerous studies based on analysis of their morphology and genetic makeup frequently provided controversial results. In the present work, we sequenced complete mitochondrial (mt) genomes and fragments of nuclear ribosomal DNA (rDNA) of the fourhorn sculpin Myoxocephalus quadricornis and some related cottids to increase the power of phylogenetic and taxonomic analyses of this complex fish group. A comparison of the My. quadricornis mt genomes obtained by us with other complete mt genomes available in GenBank has revealed a surprisingly low divergence (3.06 ± 0.12%) with Megalocottus platycephalus and, at the same time, a significantly higher divergence (7.89 ± 0.16%) with the species of the genus Myoxocephalus. Correspondingly, phylogenetic analyses have shown that My. quadricornis is clustered with Me. platycephalus but not with the Myoxocephalus species. Completely consistent patterns of divergence and tree topologies have been obtained based on nuclear rDNA. Thus, the multi-gene data in the present work indicates obvious contradictions in the relationships between the Myoxocephalus and Megalocottus species studied. An extensive phylogenetic analysis has provided evidence for a closer affinity of My. quadricornis with the species of the genus Megalocottus than with the species of the genus Myoxocephalus. A recombination analysis, along with the additional GenBank data, excludes introgression and/or incorrect taxonomic identification as the possible causative factors responsible for the observed closer affinity between the two species from different genera. The above facts necessitate realignment of the genera Myoxocephalus and Megalocottus. The genetic data supports the two recognized genera, Myoxocephalus and Megalocottus, but suggests changing their compositions through transferring My. quadricornis to the genus Megalocottus. The results of the present study resolve the relationships within a complex group of sculpin fishes and show a promising approach to phylogenetic systematics (as a key organizing principle in biodiversity research) for a better understanding of the taxonomy and evolution of fishes and for supplying relevant information to address various fish biodiversity conservation and management issues. Full article

Many marine species inhabiting icy seawater produce antifreeze proteins (AFPs) to prevent their body fluids from freezing. The sculpin species of the superfamily Cottoidea are widely found from the Arctic to southern hemisphere, some of which are known to express AFP. Here we clarified DNA sequence encoding type I AFP for 3 species of 2 families (Cottidae and Agonidae) belonging to Cottoidea. We also examined antifreeze activity for 3 families and 32 species of Cottoidea (Cottidae, Agonidae, and Rhamphocottidae). These fishes were collected in 2013–2015 from the Arctic Ocean, Alaska, Japan. We could identify 8 distinct DNA sequences exhibiting a high similarity to those reported for Myoxocephalus species, suggesting that Cottidae and Agonidae share the same DNA sequence encoding type I AFP. Among the 3 families, Rhamphocottidae that experience a warm current did not show antifreeze activity. The species inhabiting the Arctic Ocean and Northern Japan that often covered with ice floe showed high activity, while those inhabiting Alaska, Southern Japan with a warm current showed low/no activity. These results suggest that Cottoidea acquires type I AFP gene before dividing into Cottidae and Agonidae, and have adapted to each location with optimal antifreeze activity level. Full article

Fish species tolerance used as a component of fish-index of biological integrity (F-IBI) can be problematic as it is usually classified using the historical data, data from literature or expert judgments. In this study, fish assemblages, water quality parameters and physical habitat factors from 206 sampling sites in the Huntai River Basin were analyzed to develop tolerance indicator values (TIVs) of fish based on a (F_b-TIVs) and the weighted averaging (WA) method (F_W-TIVs). The two quantitative methods for fish tolerance were then compared. The F_W-TIVs and F_b-TIVs of fish species were calculated separately using a WA inference model based on ten water quality parameters (WT, pH, DO, SC, TDS, NH₃, NO₂⁻, NO₃⁻, TP, Cl⁻, and SO₄²⁻), and six biological traits (lithophilic spawning, benthic invertivores, cold water species, equilibrium or periodic life history strategies, families of Cottidae, and species distribution range). Fish species were then classified into biological traits approach three categories (tolerant species, moderately tolerant species, and sensitive species). The results indicated that only 30.3% fish species have the same classification based on F_W-TIVs and F_b-TIVs. However, the proportion of tolerant species based on two methods had a similar response to environmental stress, and these tolerant species were correlated with PCA axes 1 site scores obtained by (F_W-TIVs, p < 0.05, R² = 0.434; F_b-TIVs, p < 0.05, R² = 0.334) and not correlated with PCA axis 2 site scores (F_W-TIVs, p > 0.05, R² = 0.001; F_b-TIVs, p > 0.05, R² = 0.012) and PCA axis 3 site scores (F_W-TIVs, p > 0.05, R² = 0.000; F_b-TIVs, p > 0.05, R² = 0.013). The results of linear regression analyses indicated that F_b-TIVs can be used for the study of fish tolerance. Fish tolerance assessments based on F_W-TIVs requires long-term monitoring of fish assemblages and water quality parameters to provide sufficient data for quantitative studies. The F_b-TIV method relies on the accurate identification of fish traits by an ichthyologist. The two methods used in this study can provide methodological references for quantitative studies of fish tolerance in other regions, and are of great significance for the development of biological assessment tools. Full article