Search Results (430)

The calcium ion-transporting ATPase (Ca²⁺-ATPase) gene family maintains plant intracellular Ca²⁺ homeostasis and regulates growth, development and stress immunity; however, its functions remain poorly characterized in Malus domestica. Here, we performed a genome-wide identification of apple Ca²⁺-ATPase genes and obtained 45 members, which were classified into MdACA (39) and MdECA (6) subfamilies and unevenly distributed on 14 chromosomes. Phylogenetic analysis of Ca²⁺-ATPase genes from Malus domestica, Arabidopsis thaliana, and Oryza sativa classified these proteins into five subgroups. The ACA and ECA subfamilies were highly conserved across species, whereas Group D was apple-specific. Collinearity and Ka/Ks analyses indicated that segmental duplication and purifying selection dominated the evolution of apple Ca²⁺-ATPase genes. Promoter cis-element prediction uncovered numerous regulatory elements related to phytohormone signaling, growth, development and stress defense. Codon usage bias analysis indicated that AUG (methionine) was the dominant codon. Tissue expression profiles showed differential expression of apple Ca²⁺-ATPase genes in various organs. Quantitative real-time PCR (qRT-PCR) assays demonstrated widespread responses of Ca²⁺-ATPase genes to Alternaria alternata infection, exogenous CaCl₂, salicylic acid (SA) and methyl jasmonate (MeJA), among which MdACA39 was strongly induced under all treatments. Subcellular localization verified that MdACA39 resides on the plasma membrane. Moreover, transient overexpression of MdACA39 significantly enhanced apple resistance to A. alternata, likely due to the activation of SA, MeJA and Ca²⁺ signaling-mediated immune pathways, the induction of disease resistance-related genes, and elevated antioxidant enzyme activity. Collectively, this study systematically characterizes the apple Ca²⁺-ATPase family and identifies MdACA39 as a key regulator of fungal resistance, providing valuable gene resources for dissecting Ca²⁺ signaling-mediated disease resistance in apple. Full article

P4-ATPases maintain transbilayer lipid asymmetry, yet their functional roles in legume crops remain poorly understood. In the present study, GmALA1-a plasma membrane-localized P4-ATPase in soybean, was identified and characterized. Its physical interaction with the β-subunit GmALIS2 at the plasma membrane via biomolecular fluorescence complementation was confirmed. Heterologous expression in the P4-ATPase-deficient yeast strain ZHY709 demonstrated that GmALA1 fully complemented the cold-sensitive growth phenotype, while co-expression with GmALIS2 only partially restored growth, suggesting GmALIS2 may modulate rather than simply stimulate GmALA1 activity, though the mechanism remains unresolved. GmALA1 suppresses triacylglycerol accumulation while elevating lysophosphatidylethanolamine and lysophosphatidylcholine content in both wild-type and mutant yeast. These findings were consistent with GmALA1-driven remodeling of membrane lipid flux. In yeast and transgenic soybean hairy roots, GmALA1 alone or in combination with GmALIS2 differentially altered the internalization and tissue-specific distribution of multiple phospholipid classes, with the pattern of NBD-lipid accumulation differing depending on GmALIS2 co-expression and cellular context. GmALA1 expression was also associated with altered yeast sensitivity to divalent cations including Ca²⁺, Co²⁺, and Zn²⁺. Also, cellular cation accumulation in the P4-ATPase-deficient background was enhanced. However, whether this reflects a direct interaction between GmALA1 and cation homeostasis machinery remains to be established. These findings establish GmALA1 as a functionally active phospholipid flippase that coordinates transmembrane lipid redistribution in concert with GmALIS2. These findings advance our understanding of P4-ATPase biology in soybean and legume crops. Full article

Calcium signaling is a fundamental regulator of cell physiology, controlling proliferation, differentiation, migration, metabolism, gene expression, and cell death. In cancer, these signaling pathways are extensively remodeled to generate spatially and temporally restricted Ca²⁺ signals that support malignant progression while avoiding calcium-induced cytotoxicity. PMCAs traditionally regarded as high-affinity calcium extrusion pumps, have recently emerged as multifunctional regulators of compartmentalized calcium signaling. In addition to maintaining low cytosolic Ca²⁺ concentrations, PMCA isoforms organize specialized signaling microdomains by interacting with receptors, ion channels, scaffold proteins, and downstream signaling molecules, thereby selectively modulating calcium-dependent pathways involved in tumor growth and metastasis. Accumulating evidence demonstrates that PMCA isoforms exert distinct, context-dependent functions in cancer. PMCA1 primarily contributes to basal calcium homeostasis but has also been implicated in tumor progression, angiogenesis, and regulation of the tumor immune microenvironment. PMCA2 promotes survival and oncogenic signaling in HER2-positive breast cancer through stabilization of receptor signaling complexes. PMCA3 has been linked mainly to endocrine tumors and selected malignancies, although mechanistic evidence remains limited. PMCA4 exhibits the greatest functional diversity, acting either as a tumor suppressor or a promoter depending on the cancer type by regulating localized calcium signaling, cell migration, invasion, differentiation, and interactions with oncogenic signaling networks. This review summarizes current advances in the structural biology, regulation, and signaling functions of PMCA isoforms, with particular emphasis on their emerging roles in cancer biology. We also discuss the potential of PMCAs as prognostic biomarkers and therapeutic targets, highlighting the importance of isoform-specific strategies for targeting calcium signaling in cancer. Full article

Saline–alkali stress severely restricts cucumber (Cucumis sativus L.) growth by disrupting ion balance, water status, photosynthesis, and redox homeostasis. Here, we examined the effects of exogenous selenium (Se) on cucumber seedlings exposed to NaHCO₃ stress. Se supplementation improved plant growth and root activity and partly restored photosynthetic performance by maintaining chlorophyll content, gas exchange, and chlorophyll fluorescence. Se reduced oxidative injury through lower ROS and MDA levels and by enhancing antioxidant enzyme activities together with the AsA–GSH cycle. In parallel, Se moderated ion toxicity by limiting Na⁺ accumulation, increasing K⁺, Ca²⁺, and Mg²⁺ uptake, and stimulating H⁺-ATPase and H⁺-PPase activities. Enhanced TCA cycle activity and organic acid accumulation suggested improved energy metabolism and ionic regulation. Se also promoted osmotic adjustment via soluble sugars and proline, and upregulated aquaporin genes (PIP1;2 and PIP2;4) to sustain water transport. Moreover, Se increased salicylic acid levels by upregulating CsPAL and CsICS, pointing to a role of SA signaling in Se-induced tolerance. Full article

Background/Objectives: Marine microorganism metabolites are structurally unique secondary metabolites possessing therapeutic potential. The current study aims to identify a novel ATPase regulator using a newly established bidirectional activity evaluation system to screen for microbial metabolites that inhibit the activities of Na⁺-K⁺-ATPase or Ca²⁺-Mg²⁺-ATPase. Methods: A total of 1258 marine microbial strains were isolated from sea mud in Zhoushan, Zhejiang. Results: The extract of strain ZSDH2536 exhibited Na⁺-K⁺ and Ca²⁺-Mg²⁺-ATPase inhibitory activity and was identified as Sirastachys pandanicola based on morphological and molecular phylogenetic analyses. The secondary metabolite was tentatively identified in the ZSDH2536 strain as a bisindole compound, and named Pandanicoline based on ¹H-NMR, ¹³C-NMR and high-resolution mass spectrometry analysis. The chemical formula of Pandanicoline is C₅₁H₆₈N₂O₁₀, with an isotopic mass of 868.4874 Da. The maximum inhibition rate of Pandanicoline on Na⁺-K⁺ and Ca²⁺-Mg²⁺-ATPase was 36.37% and 37.27%, respectively. Moreover, in silico analysis also showed the binding energy of Pandanicoline with Na⁺-K⁺-ATPase was −9.124 kcal/mol and with the Ca²⁺-Mg²⁺-ATPase complex was −10.47 kcal/mol. Conclusions: The strain ZSDH2536 represents a promising source of dual inhibitors targeting Na⁺-K⁺ and Ca²⁺-Mg²⁺-ATPase. Pandanicoline exhibits potential as a lead compound for regulating ion homeostasis, providing new opportunities for further investigation into its mechanism and therapeutic applications. Full article

T cells are the central regulators of the adaptive immune system, guiding both the cell-mediated and antibody-based elements of the immune response. Crucial to T-cell activation and differentiation, the T-cell receptor must transduce antigen exposure using a sustained elevated Ca²⁺ signal. A substantial body of research has identified and characterized multiple players in the Ca²⁺ signaling pathway, yet the sarcoplasmic/endoplasmic reticulum Ca²⁺-ATPase (SERCA) transporters, which intervene actively to regulate Ca²⁺ signal patterning and duration, remain relatively poorly characterized in the full scope of the T-cell signaling paradigm. In this review, we summarize the expanding research that is beginning to clarify the multiple complex roles SERCAs perform in shaping the information-rich Ca²⁺ signal. Pharmacologic modulators and other studies have revealed molecular and functional diversity in the SERCA pumps, with increasing recognition of their critical positioning in regulating ER Ca²⁺ store networks and functional roles, which ultimately derive from dynamic microdomain assemblies containing potentially highly tailored SERCA-binding protein interactomes. A better understanding of SERCA transporter functions underlies increasing interest in developing novel therapeutic strategies targeting these key ion pumps in efforts to engineer T-cell phenotypes for more therapeutically efficacious management of cancer, autoimmunity, and other immune-based pathologies. Full article

Calcium (Ca²⁺) functions as a second messenger in plants, coordinating development and stress responses through cytosolic Ca²⁺ dynamics. The P-type Ca²⁺-ATPases of the ECA (P-IIA) and ACA (P-IIB) subfamilies are central to Ca²⁺ homeostasis and signal termination by extruding Ca²⁺ from the cytosol. In this study, genome-wide identification was performed to identify the P-type Ca²⁺-ATPases according to the maize B73 v5 reference genome, followed by phylogenetic, structural, chromosomal, syntenic, network, and expression analyses. Nineteen genes were identified, comprising 4 ECAs and 15 ACAs. All 19 members retained the DKTGT phosphorylation site, while the CaATP_NAI (N- terminal autoinhibitory) extension distinguished all 15 ACAs from the 4 ECAs. Collinearity analysis revealed 11 maize–rice syntenic pairs, implicating segmental duplication. ECAs were preferentially expressed in reproductive tissues, whereas ACAs were broadly expressed across vegetative organs. RNA-seq-based profiling detected distinct stress-responsive expression patterns of Ca²⁺-ATPase genes. Under abiotic stress, ZmACA12-1 was consistently upregulated under drought, ZmACA6-2 dominated the heat response, and ZmACA4-2 showed the broadest cross-stress repression. Under biotic stress, ACA members again dominated, with ZmACA1-1 being the most broadly pathogen-responsive member, ZmECA1-3 the principal ECA-class responder, and ZmACA9 exhibiting consistent pathogen-associated repression. Additionally, ZmACA12-1 and ZmACA4-4 showed genotype-dependent regulation between resistant and susceptible lines. Collectively, these candidates represent priority targets for functional validation of the calcium efflux mechanisms that underlie maize adaptation to both abiotic and biotic stresses. Full article

Acute heart failure (AHF) and cardiogenic shock (CS) remain major causes of cardiovascular morbidity, mortality, and healthcare utilization worldwide. Although inotropic agents are central to the management of low-output states, their clinical utility is fundamentally constrained by mechanisms that increase myocardial oxygen consumption, disrupt calcium homeostasis, and promote arrhythmogenesis, without improving long-term outcomes. These limitations reflect not only pharmacological shortcomings, but a broader conceptual reliance on amplification of intracellular calcium flux as the primary means of augmenting contractility. While effective in increasing cardiac output, this strategy imposes substantial energetic and electrophysiological costs and fails to address key abnormalities of the failing myocardium, including impaired calcium recirculation and diastolic dysfunction. Istaroxime is a first-in-class agent that combines Na⁺/K⁺-ATPase inhibition with enhancement of sarcoplasmic reticulum Ca²⁺-ATPase (sarcoplasmic reticulum Ca²⁺-ATPase isoform 2a (SERCA2a)) function, thereby modulating both calcium availability and reuptake. This dual mechanism promotes a more coordinated pattern of excitation–contraction coupling, integrating systolic augmentation with improved diastolic relaxation. Early clinical studies demonstrate a distinct hemodynamic profile characterized by increased stroke volume, preservation of heart rate, and stabilization or elevation of arterial pressure. These properties suggest a potential role for istaroxime in specific hemodynamic phenotypes, particularly hypotensive AHF and early cardiogenic shock, where conventional inotropes are limited by tachycardia or vasodilatory effects. However, current evidence is limited to phase II studies focused on hemodynamic endpoints, and the impact of istaroxime on survival, organ function, and disease progression remains unknown. Istaroxime represents a mechanistically distinct approach to inotropic therapy, shifting the paradigm from calcium amplification toward partial restoration of calcium cycling. Its clinical relevance will depend on whether this strategy can translate into improved patient outcomes—an objective that has thus far eluded the entire class of inotropic agents. Full article

Nitrite is a key environmental challenge in intensive shrimp aquaculture, adversely affecting physiological regulation and survival. Although tolerant Penaeus vannamei families have been established by selective breeding, the basis of family-level variation in tolerance has yet to be clarified. In this study, nitrite-tolerant and nitrite-sensitive families were compared using survival analysis, transcriptomics, targeted qPCR validation, physiological assays, and RNA interference of representative transport-related genes. Under nitrite exposure, the tolerant family exhibited significantly higher survival and a distinct gill transcriptional response, characterized by stronger induction of acid–base and ion-transport genes, including carbonic anhydrase 2 (CA2), the Na⁺/K⁺-ATPase subunits ATP1A and ATP1B, as well as several V-type H⁺-ATPase-related genes. These transcriptional changes were accompanied by elevated ATP content and Na⁺/K⁺-ATPase activity, improved hemolymph pH stability, and reduced nitrite accumulation in both gill and hemolymph. RNAi-mediated knockdown of CA2 or ATP1B attenuated the nitrite-induced transport response, decreased ATP content and NKA activity, exacerbated hemolymph acidification, promoted internal nitrite accumulation, and ultimately reduced shrimp survival under nitrite stress. Family-based validation further showed that the tolerant family displayed higher survival than the sensitive family in the dsEGFP group, whereas this advantage was markedly reduced after CA2 or ATP1B knockdown under nitrite stress. These findings highlight that strengthened branchial ion transport and acid–base regulation represent key physiological mechanisms underlying nitrite tolerance in resistant shrimp families. Full article

Excitotoxicity is one of the factors that participates in neurodegeneration, impairing neuronal and glial cells’ function, and leading to the development of chronic neurodegenerative diseases. The main mechanism of action lies in the overstimulation of excitatory receptors, especially the NMDA (N-methyl-D-aspartic acid) receptor, by glutamate, which promotes a massive influx of Ca²⁺ that is not sufficiently buffered by the intracellular machinery, or not released by mechanisms such as Ca²⁺ ATPase and plasma membrane Ca²⁺/Na⁺ exchanger promoting, among other toxic effects, mitochondrial damage and an increase in reactive oxygen species (ROS). Notably, many cases reported of long COVID-19 describe significant brain alterations and neuropsychiatric disorders, including delirium, depression, etc., and patients required increased use of antidepressant or anxiolytic drugs, for example. In addition, emerging evidence links neurodegeneration as a potential long-term sequelae associated with an increased number of patients with cognitive disorders. This review analyzes data from the literature regarding brain alterations associated with post-COVID-19 syndrome and explores a potential link to the excitotoxicity pathways, due to its participation in neurodegeneration by homeostatic failure, and it is clearly present in various brain conditions, such as Alzheimer’s and Parkinson’s diseases. Full article

Tumour necrosis factor-alpha (TNF-α) disrupts bioenergetic homeostasis in skeletal muscle cells through the suppression of ion-dependent ATPase activities, mitochondrial depolarisation, and impairment of antioxidant defences. Carvacrol, a phenolic monoterpenoid constituent of thyme and oregano essential oil, has been shown to exert cytoprotective effects in TNF-α-challenged L6 rat myoblasts. The mechanistic basis of these effects, specifically the relationship between membrane-associated ATPase function, mitochondrial polarisation status, and transcriptional regulation of metabolic stress-response genes, has not been formally characterised. L6 rat myoblasts were exposed to TNF-α (10 ng/mL, 1 h), then treated with carvacrol (6.25 µg/mL, 24 h) in a post-inflammatory rescue paradigm. Cell viability (MTT), membrane integrity (LDH), ion-dependent ATPase activities (Na⁺/K⁺, Ca²⁺, Mg²⁺), antioxidant enzyme activities (catalase, SOD), mitochondrial membrane potential (Muse™ MitoPotential flow cytometry), and SIRT1/AMPK mRNA expression were quantified. TNF-α significantly suppressed Na⁺/K⁺, Ca²⁺, and Mg²⁺-dependent ATPase activities (all p < 0.001), consistent with impaired membrane-associated bioenergetic function. Post-TNF-α carvacrol treatment partially restored all three ATPase activities (p < 0.05) and reduced the proportion of mitochondrially depolarised cells from 31.65 ± 4.25% to 19.0 ± 2.6% (p < 0.05). LDH release, catalase activity, and SOD activity were also significantly modulated. At the transcriptional level, carvacrol increased SIRT1 mRNA by 1.6-fold and AMPK mRNA by 2.0-fold relative to TNF-α-treated cells. An integrative bioenergetic model is proposed in which carvacrol’s membrane-intercalating properties restore the phospholipid environment required for ATPase conformational cycling, attenuating the Ca²⁺ overload that drives mitochondrial permeability transition, and thereby partially preserving Δψm. Transcriptional upregulation of SIRT1 and AMPKα may represent an adaptive response to residual energetic stress. The mechanistic relationships among these endpoints and the causal contribution of SIRT1 and AMPK to observed bioenergetic changes require protein-level and pathway-specific experimental validation. Full article

Saline-alkaline water is increasingly used for aquaculture. Qihe crucian carp (Carassius carassius) is one of the major economic aquacultural species in China; however, the impact of saline-alkaline water on this fish remains unclear. In this study, a 60 d chronic alkalinity stress experiment was conducted to investigate the effects on the growth, physiology, and muscle quality of Qihe crucian carp. One hundred and eighty juvenile fish (31.03 ± 0.71 g) were divided into three treatments (three replicate tanks per treatment, 20 fish per tank): a control group (freshwater), a CA20 group (20 mmol/L), and a CA40 group (40 mmol/L). Despite no effect on survival, alkalinity stress significantly impaired growth performance in both the CA20 and CA40 groups, leading to reductions in final body weight, weight gain rate, and specific growth rate. Similarly, the feed efficiency decreased with increasing alkalinity. Compared to the control group, the alkalinity groups exhibited elevated serum Na⁺ levels and higher gill Na⁺/K⁺-ATPase activity, but reduced Ca²⁺/Mg²⁺-ATPase activity. For histology, chronic alkalinity stress induced several changes in the gills, including wider filaments, shortened lamellae, and the increase in interlamellar distance. Regarding muscle nutritional composition, the contents of crude protein and amino acids and the proportions of polyunsaturated fatty acids showed a downward trend with rising alkalinity. Additionally, alkalinity stress significantly decreased muscle fiber density and hardness. Taking into account both growth performance and muscle quality, the suggested aquacultural alkalinity should be controlled below 20 mmol/L for Qihe crucian carp. In conclusion, these findings supported Qihe crucian carp as a promising candidate species for saline-alkaline water aquaculture, providing a scientific basis for the utilization of this special water resource. Full article

Phosphate (Pi) and calcium (Ca²⁺) are essential mineral ions that play coordinated roles in maintaining normal cellular functions. While various steps of calcium signaling are well characterized, emerging evidence suggests the critical role of both intracellular and extra cellular phosphate in regulating intracellular Ca²⁺. In the cytoplasm, phosphate influences ATP production and organelle calcium buffering and influences the activity of calcium pumps, such as sarcoplasmic/endoplasmic reticulum Ca²⁺-ATPase (SERCA) and the plasma membrane Ca²⁺-ATPase (PMCA). Extracellular phosphate, taken up via sodium-dependent phosphate transporters, triggers signaling cascades that affect the processes of calcium influx, storage, and release. Additionally, high extracellular phosphate levels can disrupt calcium homeostasis through the systemic interactions of hormones such as fibroblast growth factor 23 (FGF23), vitamin D and parathyroid hormone (PTH), especially under pathological conditions such as chronic kidney disease (CKD). This article briefly summarizes the current understanding of the bidirectional influence of intra- and extracellular phosphate on calcium dynamics at the cellular level, with a focus on the underlying mechanisms. Full article

How do ryanodine receptors (RyRs) open simultaneously to trigger the contraction of whole myofibrils within a large skeletal muscle cell? One possible answer is the uniformity of mechanosensitive RyRs, which is mechanically forced by the neighboring environment, including proteins. Here, we review papers addressing this proposed “mechanical sarcoplasmic reticulum (SR) paradigm”. Crystals of the molecular complexes comprising RyR and L-type voltage-gated Ca²⁺ channels were observed at the T-tubule/SR junction in situ using cryo-electron tomography. Observations of the SR vesicles isolated from rabbit and scallop cross-striated muscles using negative staining and transmission electron microscope raised a hypothesis of dynamic rearrangement of the Ca²⁺-ATPase (ATPase) molecules in response to cytoplasmic calcium concentration, as follows: (i) At a low calcium concentration where the ratio of operating ATPase molecules to the total molecules is at a submaximal level, the ATPase molecules form, at least in part, their cylindrical crystals in the SR membrane with the help of ATP; this results in the elongation of the SR vesicles. (ii) High concentrations of calcium, at which the ratio of operating ATPase molecules is maximal, reversibly collapse the ATPase crystals to transform the elongated vesicles into round forms comprising tightly attached crystal patches. These data further lead to the idea that the reversible growth of cylindrical ATPase crystals provides a dynamic crystalline network, which acts as an “SR membrane-endoskeletal motor” to manipulate the SR movement. The possibility of interactions between ATPase crystals and neighboring RyR crystals is also discussed. Full article

Pomegranate peel is a food industry waste rich in polyphenols. To date, its effect in alleviating fatigue remains unclear. This study aimed to characterize the chemical composition of pomegranate peel polyphenols (PPPs), evaluate its antioxidant and anti-fatigue capacities, and investigate the underlying mechanism. In the current study, twenty main compounds, primarily flavonoids, phenolic acids, and anthocyanins, were identified from PPPs using LC-MS/MS. In H₂O₂-induced HepG2 cells, PPPs promoted cellular repair and reduced the production of intracellular malondialdehyde (MDA) and reactive oxygen species (ROS) via enhancing the activity of antioxidant enzymes (SOD, CAT, and GSH-Px). In the endurance swimming-induced fatigue mice model, PPPs prolonged mice exhaustion times, reduced accumulation of fatigue-related metabolites (BUN, LA, BA, LDH and CK), and alleviated liver and muscle tissue damage. Mechanistically, PPPs mitigated oxidative stress via activation of the Keap1/Nrf2 pathway, leading to increased expression of hemeoxygenase-1 (HO-1) and NAD(P)H quinone oxidoreductase 1 (NQO1). Furthermore, PPPs stimulated energy metabolism by activating the AMPK/PGC-1α/PPAR-α pathway, promoting mitochondrial biogenesis, enhancing glycogen storage, increasing ATPase activity (Na⁺-K⁺-ATPase, Ca²⁺-Mg²⁺-ATPase, and T-ATPase) and accelerating lipid β-oxidation. These findings suggest that PPPs is a promising anti-fatigue supplement and could be further utilized in the nutritional industry. Full article