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Keywords = CMSY and BSM method

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16 pages, 3173 KB  
Article
A Quantitative Approach to Prior Setting for Relative Biomass (B/k) in CMSY++: Application to Snow Crabs (Chionoecetes opilio) in Korean Waters
by Ji-Hyun Eom, Sung-Il Lee and Sang-Chul Yoon
Fishes 2025, 10(8), 400; https://doi.org/10.3390/fishes10080400 - 11 Aug 2025
Cited by 2 | Viewed by 1531
Abstract
Snow crabs (Chionoecetes opilio), a commercially valuable species in Korean waters, have been managed under the Total Allowable Catch (TAC) system since 2002. However, stock assessment has been limited due to difficulties in estimating key ecological traits such as growth, maturity, [...] Read more.
Snow crabs (Chionoecetes opilio), a commercially valuable species in Korean waters, have been managed under the Total Allowable Catch (TAC) system since 2002. However, stock assessment has been limited due to difficulties in estimating key ecological traits such as growth, maturity, and mortality. In this study, the Bayesian Schaefer Model (BSM), implemented within CMSY++ framework, was applied to assess the stock status of snow crabs in Korean waters. BSM requires catch and abundance index data, such as catch per unit effort (CPUE) or biomass, as well as prior information on species resilience and relative biomass (B/k). To improve the reliability of B/k priors, we developed a method to calculate them quantitatively using fishery data, sales amounts, and biological information, unlike the qualitative assumptions on stock and fishing conditions proposed in previous research. Two standardized CPUE indices with differing temporal trends in recent years were used as abundance indices. To address the structural uncertainty associated with these divergent trends, we applied a grid-based approach by treating each CPUE index as an independent model scenario and integrating the posterior distributions. A total of 12,000 posterior estimates (6000 per index) were generated through the BSM and used to construct a Kobe plot. Results indicate that the current biomass is slightly above the level supporting maximum sustainable yield, and fishing mortality slightly below the optimal level, suggesting that the stock is healthy and sustainably exploited. Future research should aim to establish a systematic framework for developing quantitative B/k priors to enhance stock assessment accuracy. Full article
(This article belongs to the Special Issue Modeling Approach for Fish Stock Assessment)
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12 pages, 4629 KB  
Article
Assessments of 12 Commercial Species Stocks in a Subtropical Upwelling Ecosystem Using the CMSY and BSM Methods
by Lin Chen, Peilong Ju, Zhenbin Lu, Cui Liang, Bin Chen, Jianguo Du and Ping Li
Fishes 2024, 9(9), 332; https://doi.org/10.3390/fishes9090332 - 24 Aug 2024
Cited by 3 | Viewed by 1839
Abstract
Twelve commercial species exploited in the eastern Guangdong and southern Fujian waters were assessed using the Catch-Maximum Sustainable Yield (CMSY) and Bayesian Schaefer Model (BSM) methods. The carrying capacity (k), intrinsic rate of population growth (r), maximum sustainable yield [...] Read more.
Twelve commercial species exploited in the eastern Guangdong and southern Fujian waters were assessed using the Catch-Maximum Sustainable Yield (CMSY) and Bayesian Schaefer Model (BSM) methods. The carrying capacity (k), intrinsic rate of population growth (r), maximum sustainable yield (MSY), and relative biomass (Bend/k and B/BMSY) were estimated. The current stock status was defined by B/BMSY and fishing mortality (F/FMSY). The results indicate that seven stocks were overfished or below safe biological limits (B/BMSY < 0.5 or F/FMSY > 1), two stocks were in a recovery phase (0.5 < B/BMSY < 1, F/FMSY < 1), and three stocks were under sustainable fishing pressure with healthy biomass, capable of producing yields close to the MSY (B/BMSY > 1, F/FMSY < 1). The stock statuses are consistent with previous studies on the utilization of pelagic fisheries in the eastern Guangdong and southern Fujian waters and with those assessments in other waters. The results of the assessments suggest that these stocks could be expected to produce higher sustainable catches if permitted to rebuild; thus, more effective and proactive management is needed in this upwelling fishing ground. Full article
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15 pages, 2226 KB  
Article
Assessment of Seabream Fisheries Stock of Oman Using the Monte Carlo Catch Maximum Sustainable Yield and the Bayesian Schaefer Model Methods
by Yasmin Al Alawi and Sachinandan Dutta
Sustainability 2023, 15(22), 15692; https://doi.org/10.3390/su152215692 - 7 Nov 2023
Cited by 6 | Viewed by 3848
Abstract
The establishment of managerial approaches for the sustainable use of fishery resources depends on a critical understanding of the stock status. The Monte Carlo catch maximum sustainable yield (CMSY) method and a Bayesian state–space implementation of the Schaefer model (BSM) are recent, but [...] Read more.
The establishment of managerial approaches for the sustainable use of fishery resources depends on a critical understanding of the stock status. The Monte Carlo catch maximum sustainable yield (CMSY) method and a Bayesian state–space implementation of the Schaefer model (BSM) are recent, but widely used, stock assessment methods for data-limited situations. Here, CMSY and BSM were used to evaluate the state and exploitation level of the seabream population. Collections of catch and effort data from 1988 to 2021, pertaining to time series, were obtained from the Fishery Statistics Book published by the Ministry of Agriculture, Fisheries and Water Resources of Oman. The CMSY and BSM results were similar, indicating that the seabream stock of Oman was overfished, as B/BMSY = 0.96 (<1) and F/FMSY = 1.25 (>1). The probability that the stock was being overfished and undergoing overfishing in 2021 was 53%, while the probability that the stock was healthy (high biomass and low fishing pressure) was only 16.2%, when the target should be higher than 75%. The conclusions are of a preliminary nature owing to the utilization of comparatively new methodologies employed to generate them, which commonly validate the condition and utilization of the populations under investigation. Our research suggests that the seabream population in Oman is overfished, and reducing fishing activity is necessary to restore its abundance. Full article
(This article belongs to the Topic Aquatic Environment Research for Sustainable Development)
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11 pages, 1965 KB  
Article
Estimating Stock Status and Biological Reference Points of the Sardine Fishery Using the Surplus Production Model from the Bay of Bengal, Bangladesh
by Rokeya Sultana, Qun Liu, Md. Abdullah Al-Mamun, Partho Protim Barman, Md. Mostafa Shamsuzzaman and Suman Barua
J. Mar. Sci. Eng. 2023, 11(5), 944; https://doi.org/10.3390/jmse11050944 - 28 Apr 2023
Cited by 5 | Viewed by 3390
Abstract
This research examined the biological reference points (BRPs) and stock status of the sardine fishery in the Bay of Bengal (BoB), Bangladesh, to determine the sustainability of this resource. The Monte Carlo method (CMSY), the Bayesian state-space Schaefer surplus production model (BSM), and [...] Read more.
This research examined the biological reference points (BRPs) and stock status of the sardine fishery in the Bay of Bengal (BoB), Bangladesh, to determine the sustainability of this resource. The Monte Carlo method (CMSY), the Bayesian state-space Schaefer surplus production model (BSM), and the ASPIC (a Stock Production Model Incorporating Covariates) software suite, were used to analyze catch–effort data obtained from the Yearbook of Fisheries Statistics of Bangladesh. All models derived maximum sustainable yields (MSY) ranging from 37,900 to 41,280 t, which is quite near to the catch from the latest year (38,051 t in 2020), indicating the fully exploited status of sardines. The estimated B < BMSY and F > FMSY values from the BSM and Schaefer models indicate a poor biomass and an unsafe fishing status. For Schaefer and BSM, the calculated F/FMSY values were 1.07 and 1.06, and the B/BMSY values were 0.92 and 0.75, which also indicate the overexploited status of the sardine fishery in the BoB, Bangladesh. This information will aid in developing management strategies and conservation policies for the sustainability and rebuilding of this commercially important resource in the BoB on the Bangladesh coast. Full article
(This article belongs to the Section Marine Biology)
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15 pages, 5040 KB  
Article
Stock Assessment of Chub Mackerel (Scomber japonicus) in the Northwest Pacific Using a Multi-Model Approach
by Kai Cai, Richard Kindong, Qiuyun Ma and Siquan Tian
Fishes 2023, 8(2), 80; https://doi.org/10.3390/fishes8020080 - 30 Jan 2023
Cited by 22 | Viewed by 7570
Abstract
Chub mackerel (Scomber japonicus) is a major targeted species in the Northwest Pacific Ocean, fished by China, Japan, and Russia, and predominantly captured with purse seine fishing gear. A formal stock assessment of Chub mackerel in the region has yet to [...] Read more.
Chub mackerel (Scomber japonicus) is a major targeted species in the Northwest Pacific Ocean, fished by China, Japan, and Russia, and predominantly captured with purse seine fishing gear. A formal stock assessment of Chub mackerel in the region has yet to be implemented by the managing authority, that is, the North Pacific Fisheries Commission (NPFC). This study aims to provide a wider choice of potential models for the stock assessment of Chub mackerel in the Northwest Pacific using available data provided by members of the NPFC. The five models tested in the present study are CMSY, BSM, SPiCT, JABBA, and JABBA-Select. Furthermore, the influence of different data types and input parameters on the performance of the different models used was evaluated. These effects for each model are catch time series for CMSY, catch time series and prior of the relative biomass for BSM, prior information for SPiCT, and selectivity coefficients for JABBA-Select. Catch and CPUE (catch per unit effort) data used are derived from NPFC, while some life history information is referred from other references. The results indicate that Chub mackerel stock might be slightly overfished, as indicated by CMSY (B2020/BMSY = 0.98, F2020/FMSY = 1.12), BSM (B2020/BMSY = 0.97, F2020/FMSY = 1.21), and the base case run for the JABBA-Select (SB2020/SBMSY = 0.99, H2020/HMSY = 0.99) models. The results of the models SPiCT (B2020/BMSY = 2.30, F2020/FMSY = 0.31) and JABBA (B2020/BMSY = 1.40, F2020/FMSY = 0.62) showed that the state of this stock may be healthy. Changes in the catch time series did not affect CMSY results but did affect BSM. The present study confirms that prior information for BSM and SPiCT models is very important in order to obtain reliable results on the stock status. The results of JABBA-Select showed that different selectivity coefficients can affect the stock status of a species, as observed in the present study. Based on the optimistic stock status indicated by the best model, JABBA, a higher catch is allowable, but further projection is required for specific catch limit setting. Results suggested that, as a precautionary measure, management would be directed towards maintaining or slightly reducing the fishing effort for the sustainable harvest of this fish stock, while laying more emphasis on accurately estimating prior input parameters for use in assessment models. Full article
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9 pages, 2348 KB  
Article
Estimation of Stock Status Using the LBB and CMSY Methods for the Indian Salmon Leptomelanosoma indicum (Shaw, 1804) in the Bay of Bengal, Bangladesh
by Md. Abdullah Al-Mamun, Md. Mostafa Shamsuzzaman, Petra Schneider, Mohammad Mojibul Hoque Mozumder and Qun Liu
J. Mar. Sci. Eng. 2022, 10(3), 366; https://doi.org/10.3390/jmse10030366 - 4 Mar 2022
Cited by 15 | Viewed by 4468
Abstract
As one of the largest and most commercially valuable finfish species, Leptomelanosomaindicum (Indian salmon) significantly contributes to Bangladesh’s marine catches. The length-based Bayesian biomass (LBB) method and catch-based Monte Carlo method (CMSY) are among the most recent and powerful methods for predicting [...] Read more.
As one of the largest and most commercially valuable finfish species, Leptomelanosomaindicum (Indian salmon) significantly contributes to Bangladesh’s marine catches. The length-based Bayesian biomass (LBB) method and catch-based Monte Carlo method (CMSY) are among the most recent and powerful methods for predicting the state of fisheries resources from data-limited fisheries. CMSY requires catch and resilience data, as well as quantitative stock status information. For LBB, only length–frequency (LF) data are required. The stock status of L. indicum was estimated using these two independent methods, utilizing twenty-one years of catch–effort and length–frequency data (978 individuals) from commercial fisheries on the Bangladesh coast. Here, a BSM (Bayesian state-space implementation of the Schaefer surplus production model) was also employed. The current study’s findings showed that the B/B0 ratio of currently exploited biomass to unexploited biomass (0.1) was smaller than BMSY/B0 (0.36) and B/BMSY = 0.28 was smaller than the reference value of 1.0, indicating the grossly overfished and depleted condition of the stock. Similar trends in the results were found for B/BMSY = 0.11 (<1.0) from CMSY. In addition, the exploitation rate (F/FMSY = 5.66), biomass (B < BMSY), and fishing status (F > FMSY) further justify the severely overfished conditions of L. indicum stock in the study area. Furthermore, the Lc_opt (optimal length at first capture) was higher than the Lc (length at first capture), indicating that this species is being overfished, and that mesh sizes should be increased for better management. This study provides information on biological reference points (BRPs), and confirms the severely overfished status of L. indicum in the coastal waters of Bangladesh. More specific and prompt management measures are required to recover and sustainably manage this valuable species, and protect the fish stock from commercial extinction. Full article
(This article belongs to the Special Issue Coastal Fish Research II)
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12 pages, 2356 KB  
Article
Fisheries Reference Point and Stock Status of Croaker Fishery (Sciaenidae) Exploited from the Bay of Bengal, Bangladesh
by Partho Protim Barman, Md. Mostafa Shamsuzzaman, Petra Schneider, Mohammad Mojibul Hoque Mozumder and Qun Liu
J. Mar. Sci. Eng. 2022, 10(1), 63; https://doi.org/10.3390/jmse10010063 - 5 Jan 2022
Cited by 15 | Viewed by 4636
Abstract
This research evaluated fisheries reference points and stock status to assess the sustainability of the croaker fishery (Sciaenidae) from the Bay of Bengal (BoB), Bangladesh. Sixteen years (2001–2016) of catch-effort data were analyzed using two surplus production models (Schaefer and Fox), the Monte [...] Read more.
This research evaluated fisheries reference points and stock status to assess the sustainability of the croaker fishery (Sciaenidae) from the Bay of Bengal (BoB), Bangladesh. Sixteen years (2001–2016) of catch-effort data were analyzed using two surplus production models (Schaefer and Fox), the Monte Carlo method (CMSY) and the Bayesian state-space Schaefer surplus production model (BSM) method. This research applies a Stock–Production Model Incorporating Covariates (ASPIC) software package to run the Schaefer and Fox model. The maximum sustainable yield (MSY) produced by all models ranged from 33,900 to 35,900 metric tons (mt), which is very close to last year’s catch (33,768 mt in 2016). The estimated B > BMSY and F < FMSY indicated the safe biomass and fishing status. The calculated F/FMSY was 0.89, 0.87, and 0.81, and B/BMSY was 1.05, 1.07, and 1.14 for Fox, Schaefer, and BSM, respectively, indicating the fully exploited status of croaker stock in the BoB, Bangladesh. The representation of the Kobe phase plot suggested that the exploitation of croaker stock started from the yellow (unsustainable) quadrant in 2001 and gradually moved to the green (sustainable) quadrant in 2016 because of the reduction in fishing efforts and safe fishing pressure after 2012. Thus, this research suggests that the current fishing pressure needs to be maintained so that the yearly catch does not exceed the MSY limit of croaker. Additionally, specific management measures should implement to guarantee croaker and other fisheries from the BoB. Full article
(This article belongs to the Special Issue Coastal Fish Research II)
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13 pages, 1830 KB  
Article
Assessing Five Major Exploited Tuna Species in India (Eastern and Western Indian Ocean) Using the Monte Carlo Method (CMSY) and the Bayesian Schaefer Model (BSM)
by Ubair Nisar, Rafiya Ali, Yongtong Mu and Yu Sun
Sustainability 2021, 13(16), 8868; https://doi.org/10.3390/su13168868 - 8 Aug 2021
Cited by 16 | Viewed by 4255
Abstract
The status of data-limited tuna fishery stocks in India has been tested using the latest and most advanced computerized methods, CMSY and BSM. Five tuna fish stocks from both the Eastern and Western Indian Ocean were assessed using both catch and catch per [...] Read more.
The status of data-limited tuna fishery stocks in India has been tested using the latest and most advanced computerized methods, CMSY and BSM. Five tuna fish stocks from both the Eastern and Western Indian Ocean were assessed using both catch and catch per unit effort (CPUE) details available from 1990 to 2015. Both methods help to calculate the maximum sustainable yield (MSY) and exploitation of MSY relative to biomass (B/BMSY). The results of maximum intrinsic rate (r) and carrying capacity are also estimated. The results revealed that all tuna stocks in both the regions were overfished, with one, the longtail tuna (Thunnus tonggol) in the Western Indian Ocean strongly overfished (B/BMSY = 0.44). Such observations, although still preliminary since the techniques used to produce them are relatively new, often associated with the situation and exploitation of all the stock in question, making the CMSY and BSM methods promising for stock assessment in data-deficit situations. The study concludes that in order to restore the status of these five tuna stocks in both regions, it would be necessary to reduce the fishing pressure. Full article
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