Search Results (581)

Understanding population connectivity and genetic structure is crucial for the effective management of exploited marine species. This study investigates the population genetics of the common European squid (Loligo vulgaris) across the Mediterranean Sea, focusing on samples from the Aegean Sea and comparative sequences from Western Mediterranean, Eastern Mediterranean, and Atlantic coasts. A total of 67 COI mitochondrial sequences were analyzed, identifying 12 haplotypes and 27 polymorphic sites. Population-level genetic diversity, pairwise F_ST values, and haplotype network analyses revealed pronounced genetic differentiation in the eastern Mediterranean contrasting with the genetic homogeneity observed among Western populations. The low haplotype diversity observed in the Greek populations of L. vulgaris may be influenced by a combination of ecological and historical factors, as the Aegean region is recognized as a hotspot of endemism and historical population fragmentation. The results indicate the existence of at least two genetically differentiated clusters within the Mediterranean basin. This study advances current knowledge of the genetic structure of Loligo vulgaris by providing novel genetic data on populations from the eastern Mediterranean, offering valuable insights for future conservation and management strategies for the species. Full article

This review provides a comprehensive synthesis of phosphorus (P) dynamics relevant to salmonid aquaculture, with a particular focus on Atlantic salmon. It explores the global P cycle, the chemical forms of P in aquatic systems, and the implications of P sourcing, processing, and availability in aquafeeds. The review distinguishes between digestibility and availability of P, summarizes requirement studies, and evaluates the contribution of marine, animal, vegetable, and inorganic sources to dietary P. It also examines how aquaculture system design, particularly recirculating aquaculture systems (RASs), influences P accumulation and emissions. By integrating nutritional, physiological, and environmental perspectives, this review offers a uniquely holistic view of P efficiency and sustainability in salmonid aquaculture. Full article

Monitoring the height of secondary forest regrowth is essential for assessing ecosystem recovery, but current methods rely on field surveys, airborne or UAV LiDAR, and 3D reconstruction from high-resolution UAV imagery, which are often costly or limited by logistical constraints. Here, we address the challenge of scaling up canopy height monitoring by evaluating a recent deep learning model, trained on data from the Amazon and Atlantic Forests, developed to extract canopy height from RGB-NIR Planet NICFI imagery. The research questions are as follows: (i) How are canopy height estimates from the model affected by slope and orientation in natural forests, based on a large and well-balanced experimental design? (ii) How effectively does the model capture the growth trajectories of Pinus and Eucalyptus plantations over an eight-year period following planting? We find that the model closely tracks Pinus growth at the parcel scale, with predictions generally within one standard deviation of UAV-derived heights. For Eucalyptus, while growth is detected, the model consistently underestimates height, by more than 10 m in some cases, until late in the cycle when the canopy becomes less dense. In stable natural forests, the model reveals seasonal artifacts driven by topographic variables (slope × aspect × day of year), for which we propose strategies to reduce their influence. These results highlight the model’s potential as a cost-effective and scalable alternative to field-based and LiDAR methods, enabling broad-scale monitoring of forest regrowth and contributing to innovation in remote sensing for forest dynamics assessment. Full article

The arboreal rodent Oecomys catherinae, which has a wide geographic distribution across Brazilian biomes, provides a model for investigating environmental influences on morphological variation. We assessed craniodental differences between the Atlantic Forest and Cerrado biomes, as well as along latitudinal gradients, using 45 specimens from 18 localities. Linear morphometric analyses (21 measurements) revealed no significant sexual dimorphism, allowing for pooled analyses. Principal Component Discriminant Analysis (DAPC) confirmed significant morphological divergence between biomes (72% accuracy, p < 0.01). We identified bony palate length (BPL) as the most discriminating variable, with higher values in the Atlantic Forest, suggesting a possible dietary adaptation in response to ecological pressures. Latitudinal effects were modest (adjusted R² = 0.05) although significant (F_1,43 = 3.63; p = 0.03), with southern populations exhibiting larger cranial dimensions than northern ones. We conclude that biome type and latitude played important roles in shaping cranial morphology in O. catherinae populations. Full article

Seaweed is a sustainable ingredient that has been suggested to improve the nutritional aspects as well as the sensory properties of different food products. The objective of this study was to evaluate the flavor properties of extracts from brown seaweed (Ascophyllum nodosum) and sugar kelp (Saccharina latissimi) obtained at different temperatures. These varieties commonly grow in the Atlantic Ocean. The seaweed samples were extracted using water at three different temperatures (50 °C, 70 °C, and 90 °C). The volatile fraction of the extracts was extracted with headspace solid-phase microextraction and analyzed by gas chromatography–mass spectrometry. The headspace chemical composition varies significantly among seaweed extracts and at different extraction temperatures. Major classes of identified compounds were aldehydes, ketones, alcohols, hydrocarbons, and halogenated compounds. Extracts were also evaluated using temporal check-all-that-apply (with 84 untrained participants). The different temperatures had minimal impact on the flavour properties of the brown seaweed samples, but the extraction temperature did influence the properties of the sugar kelp samples. Increasing the extraction temperature seemed to lead to an increase in bitterness, savouriness, and earthy flavor, but future studies are needed to confirm this finding. This study continues the exploration of the flavor properties of seaweeds and identifies the dynamic flavor profile of brown seaweed and sugar kelp under different extraction conditions. Full article

Oceanic mesoscale activity influences the atmosphere in the southwestern and southern sectors of the Atlantic Ocean. However, the influence of high latitudes, specifically sea ice, on mid-latitudes and a better understanding of mesoscale ocean–atmosphere thermodynamic interactions still require further study. To quantify the effects of oceanic mesoscale activity during the periods of maximum and minimum Antarctic sea ice extent (September 2019 and February 2020), numerical experiments were conducted using a coupled regional model and an online two-dimensional spatial filter to remove high-frequency sea surface temperature (SST) oscillations. The largest SST anomalies were observed in the Brazil–Malvinas Confluence and along oceanic fronts in September, with maximum SST anomalies reaching 4.23 °C and −3.71 °C. In February, the anomalies were 2.18 °C and −3.06 °C. The influence of oceanic mesoscale activity was evident in surface atmospheric variables, with larger anomalies also observed in September. This influence led to changes in the vertical structure of the atmosphere, affecting the development of the marine atmospheric boundary layer (MABL) and influencing the free atmosphere above the MABL. Modulations in precipitation patterns were observed, not only in oceanic regions, but also in adjacent continental areas. This research provides a novel perspective on ocean–atmosphere thermodynamic coupling, highlighting the mesoscale role and importance of its representation in the study region. Full article

Rare earth elements (REEs) are emerging soil contaminants due to increasing fertilizer use, mining activities, and technological applications. However, few studies have assessed their concentrations in soils or associated environmental risks. Here, we evaluate the influence of land cover types (Eucalyptus plantation, forest, and pasture), parent material, and soil physicochemical properties (predictor variables) on REE content in the Brazilian Atlantic Forest and measure pseudo-total REE content using inductively coupled plasma mass spectrometry (ICP-MS). Differences in REE content across land cover types, parent materials, and soil properties were assessed using similarity and variance analyses (ANOSIM, ANOVA, and Kruskal–Wallis) followed by post hoc tests (Tukey HSD and Dunn’s). We used model selection based on the Akaike criterion (ΔAICc < 2) to determine the influence of predictor variables on REE content. Our results showed that parent materials (igneous and metamorphic rocks) were the best predictors, yielding plausible models (Adj R² ≥ 0.3) for Y, δEu, and La_N/Sa_N. In contrast, Ca:Mg alone provided a plausible model (Adj R² = 0.15) for δCe anomalies, while clay content (Adj R² = 0.11) influenced the Sa_N/Yb_N ratio, though soil properties had weaker effects than parent materials. However, we found no evidence that Eucalyptus plantations or pastures under non-intensive management increase REE content in Brazilian Atlantic Forest soils. Full article

Background/Objetives: Sea lice (Caligus rogercresseyi) pose a major threat to Atlantic salmon (Salmo salar) aquaculture by compromising fish health and reducing production efficiency. While genetic variation in parasite load has been reported, the molecular mechanisms underlying this variation remain unclear. Methods: two sea lice challenge trials were conducted, achieving high infestation rates (47.5% and 43.5%). A total of 85 fish, selected based on extreme phenotypes for lice burden (42 low, 43 high), were subjected to transcriptomic analysis. Differential gene expression was integrated with allele-specific expression (ASE) analysis to uncover cis-regulatory variation influencing host response. Results: Sixty genes showed significant ASE (p < 0.05), including 33 overexpressed and 27 underexpressed. Overexpressed ASE genes included Keratin 15, Collagen IV/V, TRIM16, and Angiopoietin-1-like, which are associated with epithelial integrity, immune response, and tissue remodeling. Underexpressed ASE genes such as SOCS3, CSF3R, and Neutrophil cytosolic factor suggest individual variation in cytokine signaling and oxidative stress pathways. Conclusions: several ASE genes co-localized with previously identified QTLs for sea lice resistance, indicating that cis-regulatory variants contribute to phenotypic differences in parasite susceptibility. These results highlight ASE analysis as a powerful tool to identify functional regulatory elements and provide valuable candidates for selective breeding and genomic improvement strategies in aquaculture. Full article

The Atlantic blue crab (Callinectes sapidus) has rapidly expanded across the Mediterranean, raising concerns over its ecological and economic impacts. This study examines the morphometric characteristics and environmental influences on C. sapidus populations in the Palud-Palù swamp (western Istrian coast) from 2022 to 2024. A total of 203 specimens were analyzed for carapace width, length, depth, and body mass, alongside monthly measurements of temperature, salinity, oxygen saturation, and pH. Statistical analyses (t-tests, ANOVA, PCA, and RDA) revealed pronounced sexual dimorphism, with males consistently larger than females. Interannual differences in size distribution showed larger individuals in 2022, followed by a decline in 2023 and 2024, likely due to environmental stressors (e.g., salinity, temperature, hypoxia) and increased anthropogenic pressures (e.g., trapping and illegal harvesting). RDA identified temperature, oxygen saturation, and pH as key abiotic drivers of morphometric variation. These findings suggest that while C. sapidus demonstrates physiological plasticity, enabling its persistence in estuarine environments, its growth and invasive potential may be constrained under extreme or suboptimal local conditions. This study highlights the importance of long-term monitoring and integrated management to mitigate ecological disruption in sensitive coastal ecosystems. Full article

This study focused on the carbonate system dynamics and air–sea CO₂ fluxes in the open-ocean waters of the Madeira–Tore Seamount Complex during August 2024. Surface water properties revealed pronounced latitudinal gradients in sea surface temperature (21.9–23.1 °C), salinity (36.2–36.7), and dissolved oxygen (228–251 µmol Kg⁻¹), influenced by mesoscale eddies and topographically driven upwelling. Despite oligotrophic conditions, distinct phytoplankton assemblages were observed, with coccolithophores dominating southern seamounts and open-ocean stations, and green algae and diatoms indicating episodic nutrient input. Surface total alkalinity (TA: 2236–2467 µmol Kg⁻¹), dissolved inorganic carbon (DIC: 2006–2183 µmol Kg⁻¹), and pCO₂ (467–515 µatm) showed spatial variability aligned with water mass characteristics and biological activity. All stations exhibited positive air–sea CO₂ fluxes (2.8–11.5 mmol m⁻² d⁻¹), indicating the region is a CO₂ source during summer. Calcite and aragonite saturation states were highest in stratified, warmer waters. Principal Component Analysis highlighted the role of physical mixing, carbonate chemistry, and biological uptake in structuring regional variability. Our findings emphasize and contribute to the complex interplay of physical and biogeochemical drivers in modulating carbon cycling and ecosystem structure across Atlantic seamounts. Full article

The Brazilian Araucaria Forest (AF) now covers only 1% of its original extent due to significant degradation, making conservation a challenge. The AF occurs in a mosaic alongside grassland and Atlantic Forest ecosystems, influencing bird species’ distribution through ecological processes. We compared the composition and functional diversity of the bird community along a gradient of AF cover in a protected area (Pró-Mata Private Natural Heritage Reserve) in southern Brazil. Bird sampling was conducted using MacKinnon lists along five trails with different histories of vegetation suppression, based on forest cover estimates from landscape imagery. Birds were functionally classified based on morphological and ecological traits. We recorded 191 bird species in total. We found higher bird richness in trails with less forest cover, while functional diversity responded inversely to vegetation cover. Bird species composition shifted from more open-habitat specialists to more forest specialists with the increasing forest cover and vegetation structural complexity. These findings highlight the ecological importance of maintaining vegetation heterogeneity, as vegetation mosaics enhance avian species richness and support a broader range of functional traits and ecosystem processes. We recommend the conservation of Araucaria Forest–grassland mosaics as a strategic approach to support multidimensional biodiversity and sustain key ecological functions in southern Brazil. Full article

Tropical forests face increasing threats and are often replaced by secondary forests that regenerate after disturbances. In the Atlantic Forest, this creates fragments of different successional stages. The aim of this study is to understand how soil nutrients and light availability gradients influence the species composition and structure of trees and regenerating strata in remnants of lowland rainforest. We sampled 15 plots for the tree stratum (DBH ≥ 5 cm) and 45 units for the regenerating stratum (height ≥ 50 cm, DBH < 5 cm), obtaining phytosociological, entropy and equitability data for both strata. Canopy openness was assessed with hemispherical photos and soil samples were homogenized. To analyze the interactions between the vegetation of the tree layer and the environmental variables, we carried out three principal component analyses and two redundancy analyses and applied a linear model. The young fragments showed good recovery, significant species diversity, and positive successional changes, while the older ones had higher species richness and were in an advanced stage of succession. In addition, younger forests are associated with sandy, nutrient-poor soils and greater exposure to light, while mature forests have more fertile soils, display a greater diversity of dispersal strategies, are rich in soil clay, and have less light availability. Mature forests support biodiversity and regeneration better than secondary forests, highlighting the importance of preserving mature fragments and monitoring secondary ones to sustain tropical biodiversity. Full article

Climate change intensifies hydrological cycles, leading to an increased variability in terrestrial water storage anomalies (TWSAs) and a heightened drought risk. Understanding the spatiotemporal dynamics of TWSAs and their driving factors is crucial for sustainable water management. While previous studies have primarily attributed TWSAs to regional factors, this study employs wavelet coherence, partial correlation analysis, and multiple linear regression to comprehensively analyze TWSA dynamics and their drivers in the Hengduan Mountains (HDM) region from 2003 to 2022, incorporating both regional and global influences. Additionally, dry–wet variations were quantified using the GRACE-based Drought Severity Index (GRACE-DSI). Key findings include the following: The annual mean TWSA showed a non-significant decreasing trend (−2.83 mm/y, p > 0.05), accompanied by increased interannual variability. Notably, approximately 36.22% of the pixels in the western HDM region exhibited a significantly decreasing trend. The Nujiang River Basin (NRB) (−17.17 mm/y, p < 0.01) and the Lancang (−17.17 mm/y, p < 0.01) River Basin experienced the most pronounced declines. Regional factors—particularly precipitation (PRE)—drove TWSA in 59% of the HDM region, followed by potential evapotranspiration (PET, 28%) and vegetation dynamics (13%). Among global factors, the North Atlantic Oscillation showed a weak correlation with TWSAs (r = −0.19), indirectly affecting it via winter PET (r = −0.56, p < 0.05). The decline in TWSAs corresponds to an elevated drought risk, notably in the NRB, which recorded the largest GRACE-DSI decline (slope = −0.011, p < 0.05). This study links TWSAs to climate drivers and drought risk, offering a framework for improving water resource management and drought preparedness in climate-sensitive mountain regions. Full article

Habitat loss and land-use intensification are major threats to biodiversity in the Brazilian Atlantic Forest, particularly for bat assemblages that provide key ecosystem services. In this study, we examined how landscape composition (forest and pasture cover) and local forest structure influence the richness and abundance of phyllostomid bats across 20 forest fragments in southern Bahia. Bat sampling was conducted using mist nets, and forest structure was quantified using tree measurements and vertical foliage stratification. We applied structural equation modeling to test the direct and indirect effects of landscape and local variables. Our results show that forest cover has both direct and indirect positive effects on bat diversity, mediated by improved forest structure. In contrast, increased pasture cover negatively affected forest structure and was weakly associated with bat diversity. The most abundant species were generalist frugivores, such as Carollia perspicillata and Rhinophylla pumilio. These findings highlight the importance of maintaining forest cover and structural complexity to support bat diversity in agroforestry-dominated landscapes. Conservation strategies that integrate habitat protection with sustainable land-use practices are crucial to maintaining biodiversity and the ecological functions provided by bats in this globally threatened biome. Full article

This paper focuses on the analysis of variability of density fluxes and water mass transformation in the North Atlantic, the quantities reflecting the intensity of intermediate and deep water formation. The authors assess the influence of atmospheric processes on the intensity of formation of subpolar modal waters, subtropical modal waters and Labrador Sea waters using the density fluxes and water mass transformation. This analysis is carried out on a seasonal and climatic time scale. The main result of the study is the seasonal and climatic dynamics of water mass transformation in the Labrador Sea, subtropical and subpolar modal waters based on CFSR reanalysis data. The results obtained help to understand the main factors influencing vertical circulation in the region, which can be used in further model experiments. Full article