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Authors = Bernhard Lechner ORCID = 0000-0002-3014-7463

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20 pages, 3336 KiB  
Article
Optimization Strategy for Process Design in Rubber Injection Molding: A Simulation-Based Approach Allowing for the Prediction of Mechanical Properties of Vulcanizates
by Martin Traintinger, Maurício Azevedo, Roman Christopher Kerschbaumer, Bernhard Lechner and Thomas Lucyshyn
Polymers 2024, 16(14), 2033; https://doi.org/10.3390/polym16142033 - 17 Jul 2024
Cited by 1 | Viewed by 1803
Abstract
Selecting the optimal settings for the production of rubber goods can be a very time-consuming and resource-intensive process. A promising method for optimizing rubber processing in a short period of time is the use of simulation routines. However, process simulations have only recently [...] Read more.
Selecting the optimal settings for the production of rubber goods can be a very time-consuming and resource-intensive process. A promising method for optimizing rubber processing in a short period of time is the use of simulation routines. However, process simulations have only recently enabled meaningful predictions of not only the part’s state of cure but also its mechanical characteristics. As a first approach, second-order polynomials were considered suitable for describing the properties of compression-molded parts. However, more precision is required for injection molding due to the narrower distribution of mechanical characteristics of parts produced at different vulcanization temperatures. This became evident when the approximation of mechanical data with second order models partly revealed significant failures of part behavior prediction. To tackle this issue, a combined approach for approximation is proposed in this contribution by means of logistic growth function in addition to second order polynomials. To feed the model, an experimental plan was designed for producing injection-molded parts from an SBR compound at various temperatures and to different degrees of cure. The parts obtained were then characterized mechanically, and the results were opposed to varying degrees of cure and extents of reaction to calculate the model coefficients. Once available, a simulation-based calculation of the mechanical part quality is possible. The comparison of test results from the simulation and the real process has shown a reliable prediction, as simulation results were found within the natural deviation of the real measurements. Full article
(This article belongs to the Section Polymer Processing and Engineering)
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15 pages, 16625 KiB  
Article
Study of Tire–Pavement Noise Acoustic Performance in Resilient Road Pavement Made of Strain-Hardening Cementitious Composites
by Ali Aryo Bawono, Nen NguyenDinh, Janaki Thangaraj, Maximilian Ertsey-Bayer, Christoph Simon, Bernhard Lechner, Stephan Freudenstein and En-Hua Yang
Acoustics 2023, 5(1), 57-71; https://doi.org/10.3390/acoustics5010004 - 9 Jan 2023
Viewed by 3304
Abstract
A modified strain-hardening cementitious composite (SHCC) material, fabricated using corundum aggregates (SHCC-Cor), has been proposed for roadway applications as it offers high structural performance and high skid resistance. However, the acoustic performance of SHCC is unclear and has not been well studied in [...] Read more.
A modified strain-hardening cementitious composite (SHCC) material, fabricated using corundum aggregates (SHCC-Cor), has been proposed for roadway applications as it offers high structural performance and high skid resistance. However, the acoustic performance of SHCC is unclear and has not been well studied in the past. Theoretically, SHCC may not provide the optimum solution in acoustic performance as it provides a low texture profile, high density, and low porosity. In this study, the acoustic performance of pavement slabs made of SHCC and modified SHCC-Cor are investigated using a nondestructive method to determine the surface roughness (macro texture) of slab surfaces. The pavement–tire noise level was then simulated using SPERoN software. As result, the noise level coming from the pavement made of SHCC could be up to 65 dB(A), while the noise level for SHCC-Cor increased up to 69.2 dB(A) because of the lower shape factor (G) due to a rougher surface as a result of the existence of corundum aggregate on the SHCC surface. The aeroacoustics were also increased compared to the SHCC slab. The modification of SHCC-Cor by introducing grooves (SHCC-Cor-Gro) successfully reduced the sound level coming from the vibration. Full article
(This article belongs to the Special Issue Vibration and Noise)
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16 pages, 2353 KiB  
Article
Saturated Fatty Acid Blood Levels and Cardiometabolic Phenotype in Patients with HFpEF: A Secondary Analysis of the Aldo-DHF Trial
by Katharina Lechner, Clemens von Schacky, Johannes Scherr, Elke Lorenz, Matthias Bock, Benjamin Lechner, Bernhard Haller, Alexander Krannich, Martin Halle, Rolf Wachter, André Duvinage and Frank Edelmann
Biomedicines 2022, 10(9), 2296; https://doi.org/10.3390/biomedicines10092296 - 15 Sep 2022
Cited by 5 | Viewed by 2493
Abstract
Background: Circulating long-chain (LCSFAs) and very long-chain saturated fatty acids (VLSFAs) have been differentially linked to risk of incident heart failure (HF). In patients with heart failure with preserved ejection fraction (HFpEF), associations of blood SFA levels with patient characteristics are unknown. Methods: [...] Read more.
Background: Circulating long-chain (LCSFAs) and very long-chain saturated fatty acids (VLSFAs) have been differentially linked to risk of incident heart failure (HF). In patients with heart failure with preserved ejection fraction (HFpEF), associations of blood SFA levels with patient characteristics are unknown. Methods: From the Aldo-DHF-RCT, whole blood SFAs were analyzed at baseline in n = 404 using the HS-Omega-3-Index® methodology. Patient characteristics were 67 ± 8 years, 53% female, NYHA II/III (87%/13%), ejection fraction ≥50%, E/e’ 7.1 ± 1.5; and median NT-proBNP 158 ng/L (IQR 82–298). Spearman´s correlation coefficients and linear regression analyses, using sex and age as covariates, were used to describe associations of blood SFAs with metabolic phenotype, functional capacity, cardiac function, and neurohumoral activation at baseline and after 12-month follow-up (12 mFU). Results: In line with prior data supporting a potential role of de novo lipogenesis-related LCSFAs in the development of HF, we showed that baseline blood levels of C14:0 and C16:0 were associated with cardiovascular risk factors and/or lower exercise capacity in patients with HFpEF at baseline/12 mFU. Contrarily, the three major circulating VLSFAs, lignoceric acid (C24:0), behenic acid (C22:0), and arachidic acid (C20:0), as well as the LCSFA C18:0, were broadly associated with a lower risk phenotype, particularly a lower risk lipid profile. No associations were found between cardiac function and blood SFAs. Conclusions: Blood SFAs were differentially linked to biomarkers and anthropometric markers indicative of a higher-/lower-risk cardiometabolic phenotype in HFpEF patients. Blood SFA warrant further investigation as prognostic markers in HFpEF. One Sentence Summary: In patients with HFpEF, individual circulating blood SFAs were differentially associated with cardiometabolic phenotype and aerobic capacity. Full article
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12 pages, 1133 KiB  
Article
Neutrophile-Lymphocyte Ratio and Outcome in Takotsubo Syndrome
by David Zweiker, Edita Pogran, Laura Gargiulo, Ahmed Abd El-Razek, Ivan Lechner, Ivan Vosko, Stefan Rechberger, Heiko Bugger, Günter Christ, Diana Bonderman, Evelyn Kunschitz, Clara Czedik-Eysenberg, Antonia Roithinger, Valerie Weihs, Christoph C. Kaufmann, Andreas Zirlik, Axel Bauer, Bernhard Metzler, Thomas Lambert, Clemens Steinwender and Kurt Huberadd Show full author list remove Hide full author list
Biology 2022, 11(8), 1154; https://doi.org/10.3390/biology11081154 - 1 Aug 2022
Cited by 7 | Viewed by 2578
Abstract
Background: Takotsubo syndrome (TTS) is an important type of acute heart failure with significant risk of acute complications and death. In this analysis we sought to identify predictors for in-hospital clinical outcome in TTS patients and present long-term outcomes. Methods: In this analysis [...] Read more.
Background: Takotsubo syndrome (TTS) is an important type of acute heart failure with significant risk of acute complications and death. In this analysis we sought to identify predictors for in-hospital clinical outcome in TTS patients and present long-term outcomes. Methods: In this analysis from the Austrian national TTS registry, univariable and multivariable analyses were performed to identify significant predictors for severe in-hospital complications requiring immediate invasive treatment or leading to irreversible damage, such as cardiogenic shock, intubation, stroke, arrhythmias and death. Furthermore, the influence of independent predictors on long-term survival was evaluated. Results: A total of 338 patients (median age 72 years, 86.9% female) from six centers were included. Severe in-hospital complications occurred in 14.5% of patients. In multivariable analysis, high neutrophile-lymphocyte-ratio (NLR; OR 1.04 [95% CI 1.02–1.07], p = 0.009) and low LVEF (OR 0.92 [0.90–0.95] per %, p < 0.001) were significant predictors of severe in-hospital complications. Both the highest NLR tercile and the lowest LVEF tercile were significantly associated with reduced 5-year survival. Conclusions: Low LVEF and high NLR at admission were independently associated with increased in-hospital complications and reduced long-term survival in TTS patients. NLR is a new easy-to-measure tool to predict worse short- and long-term outcome after TTS. Full article
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11 pages, 855 KiB  
Article
Association of C-Reactive Protein Velocity with Early Left Ventricular Dysfunction in Patients with First ST-Elevation Myocardial Infarction
by Magdalena Holzknecht, Christina Tiller, Martin Reindl, Ivan Lechner, Priscilla Fink, Patrick Lunger, Agnes Mayr, Benjamin Henninger, Christoph Brenner, Gert Klug, Axel Bauer, Bernhard Metzler and Sebastian Johannes Reinstadler
J. Clin. Med. 2021, 10(23), 5494; https://doi.org/10.3390/jcm10235494 - 24 Nov 2021
Cited by 9 | Viewed by 2357
Abstract
C-reactive protein velocity (CRPv) has been proposed as a very early and sensitive risk predictor in patients with ST-elevation myocardial infarction (STEMI). However, the association of CRPv with early left ventricular (LV) dysfunction after STEMI is unknown. The aim of this study was [...] Read more.
C-reactive protein velocity (CRPv) has been proposed as a very early and sensitive risk predictor in patients with ST-elevation myocardial infarction (STEMI). However, the association of CRPv with early left ventricular (LV) dysfunction after STEMI is unknown. The aim of this study was to investigate the relationship between CRPv and early LV dysfunction, either before or at hospital discharge, in patients with first STEMI. This analysis evaluated 432 STEMI patients that were included in the prospective MARINA-STEMI (Magnetic Resonance Imaging In Acute ST-elevation Myocardial Infarction. ClinicalTrials.gov Identifier: NCT04113356) cohort study. The difference of CRP 24 ± 8 h and CRP at hospital admission divided by the time (in h) that elapsed during the two examinations was defined as CRPv. Cardiac magnetic resonance (CMR) imaging was conducted at a median of 3 (IQR 2–4) days after primary percutaneous coronary intervention (PCI) for the determination of LV function and myocardial infarct characteristics. The association of CRPv with the CMR-derived LV ejection fraction (LVEF) was investigated. The median CRPv was 0.42 (IQR 0.21–0.76) mg/l/h and was correlated with LVEF (rS = −0.397, p < 0.001). In multivariable linear as well as binary logistic regression analysis (adjustment for biomarkers and clinical and angiographical parameters), CRPv was independently associated with LVEF (β: 0.161, p = 0.004) and LVEF ≤ 40% (OR: 1.71, 95% CI: 1.19–2.45; p = 0.004), respectively. The combined predictive value of peak cardiac troponin T (cTnT) and CRPv for LVEF ≤ 40% (AUC: 0.81, 95% CI 0.77–0.85, p < 0.001) was higher than it was for peak cTnT alone (AUC difference: 0.04, p = 0.009). CRPv was independently associated with early LV dysfunction, as measured by the CMR-determined LVEF, revealing an additive predictive value over cTnT after acute STEMI treated with primary PCI. Full article
(This article belongs to the Special Issue C-Reactive Protein and Cardiovascular Disease: Clinical Aspects)
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12 pages, 4666 KiB  
Article
Temperature Profile in Rubber Injection Molding: Application of a Recently Developed Testing Method to Improve the Process Simulation and Calculation of Curing Kinetics
by Martin Traintinger, Roman Christopher Kerschbaumer, Bernhard Lechner, Walter Friesenbichler and Thomas Lucyshyn
Polymers 2021, 13(3), 380; https://doi.org/10.3390/polym13030380 - 26 Jan 2021
Cited by 10 | Viewed by 4635
Abstract
Injection molding of rubber compounds is an easily conducted yet sophisticated method for rubber processing. Simulation software is used to examine the optimal process conditions, identify failure scenarios, and save resources. Due to the complexity of the entire process, various aspects have to [...] Read more.
Injection molding of rubber compounds is an easily conducted yet sophisticated method for rubber processing. Simulation software is used to examine the optimal process conditions, identify failure scenarios, and save resources. Due to the complexity of the entire process, various aspects have to be considered in the numerical approach. This contribution focused on a comparison of process simulations with various definitions of the material’s inlet temperature, ranging from a stepwise increase, but constant temperature, to an exact axial mass temperature profile prior to injection. The latter was obtained with a specially designed, unique test stand consisting of a plasticizing cylinder equipped with pressure sensors, a throttle valve for pressure adjustments, and a measurement bar with thermocouples for the determination of the actual state of the mass temperature. For the verification of the theoretical calculations, practical experiments were conducted on a rubber injection molding machine equipped with the mold used in the simulation. The moldings, obtained at different vulcanization time, were characterized mechanically and the results were normalized to a relative degree of cure in order to enable comparison of the real process and the simulation. Considering the actual state of the mass temperature, the simulation showed an excellent correlation of the measured and calculated mass temperatures in the cold runner. Additionally, the relative degree of cure was closer to reality when the mass temperature profile after dosing was applied in the simulation. Full article
(This article belongs to the Section Polymer Processing and Engineering)
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16 pages, 2723 KiB  
Article
The Tension-Twist Coupling Mechanism in Flexible Composites: A Systematic Study Based on Tailored Laminate Structures Using a Novel Test Device
by Julia Beter, Bernd Schrittesser, Gerald Meier, Bernhard Lechner, Mohammad Mansouri, Peter Filipp Fuchs and Gerald Pinter
Polymers 2020, 12(12), 2780; https://doi.org/10.3390/polym12122780 - 24 Nov 2020
Cited by 9 | Viewed by 4195
Abstract
The focus of this research is to quantify the effect of load-coupling mechanisms in anisotropic composites with distinct flexibility. In this context, the study aims to realize a novel testing device to investigate tension-twist coupling effects. This test setup includes a modified gripping [...] Read more.
The focus of this research is to quantify the effect of load-coupling mechanisms in anisotropic composites with distinct flexibility. In this context, the study aims to realize a novel testing device to investigate tension-twist coupling effects. This test setup includes a modified gripping system to handle composites with stiff fibers but hyperelastic elastomeric matrices. The verification was done with a special test plan considering a glass textile as reinforcing with different lay-ups to analyze the number of layers and the influence of various fiber orientations onto the load-coupled properties. The results demonstrated that the tension-twist coupling effect strongly depends on both the fiber orientation and the considered reinforcing structure. This enables twisting angles up to 25° with corresponding torque of about 82.3 Nmm, which is even achievable for small lay-ups with 30°/60° oriented composites with distinct asymmetric deformation. For lay-ups with ±45° oriented composites revealing a symmetric deformation lead, as expected, no tension-twist coupling effect was seen. Overall, these findings reveal that the described novel test device provides the basis for an adequate and reliable determination of the load-coupled material properties between stiff fibers and hyperelastic matrices. Full article
(This article belongs to the Special Issue Advanced Rubber Composite)
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3 pages, 171 KiB  
Editorial
Predictors of Long-Term Outcome in STEMI and NSTEMI—Insights from J-MINUET
by Ivan Lechner, Martin Reindl, Bernhard Metzler and Sebastian J. Reinstadler
J. Clin. Med. 2020, 9(10), 3166; https://doi.org/10.3390/jcm9103166 - 30 Sep 2020
Cited by 7 | Viewed by 2847
Abstract
Although patients with ST-segment elevation myocardial infarction (STEMI) and non-ST- segment elevation myocardial infarction (NSTEMI) share similar risk factors and comparable pathophysiology [...] Full article
(This article belongs to the Special Issue Diagnosis and Treatment of Myocardial Infarction)
16 pages, 3710 KiB  
Article
Viscoelastic Behavior of Glass-Fiber-Reinforced Silicone Composites Exposed to Cyclic Loading
by Julia Beter, Bernd Schrittesser, Bernhard Lechner, Mohammad Reza Mansouri, Claudia Marano, Peter Filipp Fuchs and Gerald Pinter
Polymers 2020, 12(9), 1862; https://doi.org/10.3390/polym12091862 - 19 Aug 2020
Cited by 22 | Viewed by 5141
Abstract
The aim of this work was to analyze the influence of fibers on the mechanical behavior of fiber-reinforced elastomers under cyclic loading. Thus, the focus was on the characterization of structure–property interactions, in particular the dynamic mechanical and viscoelastic behavior. Endless twill-woven glass [...] Read more.
The aim of this work was to analyze the influence of fibers on the mechanical behavior of fiber-reinforced elastomers under cyclic loading. Thus, the focus was on the characterization of structure–property interactions, in particular the dynamic mechanical and viscoelastic behavior. Endless twill-woven glass fibers were chosen as the reinforcement, along with silicone as the matrix material. For the characterization of the flexible composites, a novel testing device was developed. Apart from the conventional dynamic mechanical analysis, in which the effect of the fiber orientation was also considered, modified step cycle tests were conducted under tensile loading. The material viscoelastic behavior was studied, evaluating both the stress relaxation response and the capability of the material to dissipate energy under straining. The effects of the displacement rate of the strain level, the amplitude of the strain applied in the loading–unloading step cycle test, and the number of the applied cycles were evaluated. The results revealed that an optimized fiber orientation leads to 30-fold enhanced stiffness, along with 10 times higher bearable stress. The findings demonstrated that tailored reinforced elastomers with endless fibers have a strong influence on the mechanical performance, affecting the structural properties significantly. Full article
(This article belongs to the Special Issue Reinforced Polymer Composites II)
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10 pages, 1068 KiB  
Article
Effect of the COVID-19 Pandemic on Treatment Delays in Patients with ST-Segment Elevation Myocardial Infarction
by Sebastian J. Reinstadler, Martin Reindl, Ivan Lechner, Magdalena Holzknecht, Christina Tiller, Franz Xaver Roithinger, Matthias Frick, Uta C. Hoppe, Peter Jirak, Rudolf Berger, Georg Delle-Karth, Elisabeth Laßnig, Gert Klug, Axel Bauer, Ronald Binder and Bernhard Metzler
J. Clin. Med. 2020, 9(7), 2183; https://doi.org/10.3390/jcm9072183 - 10 Jul 2020
Cited by 54 | Viewed by 4119
Abstract
Coronavirus disease 19 (COVID-19) and its associated restrictions could affect ischemic times in patients with ST-segment elevation myocardial infarction (STEMI). The objective of this study was to investigate the influence of the COVID-19 outbreak on ischemic times in consecutive all-comer STEMI patients. We [...] Read more.
Coronavirus disease 19 (COVID-19) and its associated restrictions could affect ischemic times in patients with ST-segment elevation myocardial infarction (STEMI). The objective of this study was to investigate the influence of the COVID-19 outbreak on ischemic times in consecutive all-comer STEMI patients. We included consecutive STEMI patients (n = 163, median age: 61 years, 27% women) who were referred to seven tertiary care hospitals across Austria for primary percutaneous coronary intervention between 24 February 2020 (calendar week 9) and 5 April 2020 (calendar week 14). The number of patients, total ischemic times and door-to-balloon times in temporal relation to COVID-19-related restrictions and infection rates were analyzed. While rates of STEMI admissions decreased (calendar week 9/10 (n = 69, 42%); calendar week 11/12 (n = 51, 31%); calendar week 13/14 (n = 43, 26%)), total ischemic times increased from 164 (interquartile range (IQR): 107–281) min (calendar week 9/10) to 237 (IQR: 141–560) min (calendar week 11/12) and to 275 (IQR: 170–590) min (calendar week 13/14) (p = 0.006). Door-to-balloon times were constant (p = 0.60). There was a significant difference in post-interventional Thrombolysis in myocardial infarction (TIMI) flow grade 3 in patients treated during calendar week 9/10 (97%), 11/12 (84%) and 13/14 (81%; p = 0.02). Rates of in-hospital death and re-infarction were similar between groups (p = 0.48). Results were comparable when dichotomizing data on 10 March and 16 March 2020, when official restrictions were executed. In this cohort of all-comer STEMI patients, we observed a 1.7-fold increase in ischemic time during the outbreak of COVID-19 in Austria. Patient-related factors likely explain most of this increase. Counteractive steps are needed to prevent further cardiac collateral damage during the ongoing COVID-19 pandemic. Full article
(This article belongs to the Special Issue Diagnosis and Treatment of Myocardial Infarction)
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13 pages, 1123 KiB  
Article
Free Electron Laser Performance within the EuPRAXIA Facility
by Federico Nguyen, Axel Bernhard, Antoine Chancé, Marie-Emmanuelle Couprie, Giuseppe Dattoli, Christoph Lechner, Alberto Marocchino, Gilles Maynard, Alberto Petralia and Andrea Renato Rossi
Instruments 2020, 4(1), 5; https://doi.org/10.3390/instruments4010005 - 1 Feb 2020
Cited by 2 | Viewed by 2834
Abstract
Over the past 90 years, particle accelerators have evolved into powerful and widely used tools for basic research, industry, medicine, and science. A new type of accelerator that uses plasma wakefields promises gradients as high as some tens of billions of electron volts [...] Read more.
Over the past 90 years, particle accelerators have evolved into powerful and widely used tools for basic research, industry, medicine, and science. A new type of accelerator that uses plasma wakefields promises gradients as high as some tens of billions of electron volts per meter. This would allow much smaller accelerators that could be used for a wide range of fundamental and applied research applications. One of the target applications is a plasma-driven free-electron laser (FEL), aiming at producing tunable coherent light using electrons traveling in the periodic magnetic field of an undulator. In this work, the plasma-based electron beams with the most promising qualities, designed in the framework of EuPRAXIA, are analyzed in terms of the FEL performance. Full article
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14 pages, 2606 KiB  
Article
Platooning of Autonomous Public Transport Vehicles: The Influence of Ride Comfort on Travel Delay
by Teron Nguyen, Meng Xie, Xiaodong Liu, Nimal Arunachalam, Andreas Rau, Bernhard Lechner, Fritz Busch and Y. D. Wong
Sustainability 2019, 11(19), 5237; https://doi.org/10.3390/su11195237 - 24 Sep 2019
Cited by 15 | Viewed by 6788
Abstract
The development of advanced technologies has led to the emergence of autonomous vehicles. Herein, autonomous public transport (APT) systems equipped with prioritization measures are being designed to operate at ever faster speeds compared to conventional buses. Innovative APT systems are configured to accommodate [...] Read more.
The development of advanced technologies has led to the emergence of autonomous vehicles. Herein, autonomous public transport (APT) systems equipped with prioritization measures are being designed to operate at ever faster speeds compared to conventional buses. Innovative APT systems are configured to accommodate prevailing passenger demand for peak as well as non-peak periods, by electronic coupling and decoupling of platooned units along travel corridors, such as the dynamic autonomous road transit (DART) system being researched in Singapore. However, there is always the trade-off between high vehicle speed versus passenger ride comfort, especially lateral ride comfort. This study analyses a new APT system within the urban context and evaluates its performance using microscopic traffic simulation. The platooning protocol of autonomous vehicles was first developed for simulating the coupling/decoupling process. Platooning performance was then simulated on VISSIM platform for various scenarios to compare the performance of DART platooning under several ride comfort levels: three bus comfort and two railway criteria. The study revealed that it is feasible to operate the DART system following the bus standing comfort criterion (ay = 1.5 m/s2) without any significant impact on system travel time. For the DART system operating to maintain a ride comfort of the high-speed train (HST) and light rail transit (LRT), the delay can constitute up to ≈ 10% and ≈ 5% of travel time, respectively. This investigation is crucial for the system delay management towards precisely designed service frequency and improved passenger ride comfort. Full article
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23 pages, 4685 KiB  
Article
Purple: A Computational Workflow for Strategic Selection of Peptides for Viral Diagnostics Using MS-Based Targeted Proteomics
by Johanna Lechner, Felix Hartkopf, Pauline Hiort, Andreas Nitsche, Marica Grossegesse, Joerg Doellinger, Bernhard Y. Renard and Thilo Muth
Viruses 2019, 11(6), 536; https://doi.org/10.3390/v11060536 - 8 Jun 2019
Cited by 3 | Viewed by 4688
Abstract
Emerging virus diseases present a global threat to public health. To detect viral pathogens in time-critical scenarios, accurate and fast diagnostic assays are required. Such assays can now be established using mass spectrometry-based targeted proteomics, by which viral proteins can be rapidly detected [...] Read more.
Emerging virus diseases present a global threat to public health. To detect viral pathogens in time-critical scenarios, accurate and fast diagnostic assays are required. Such assays can now be established using mass spectrometry-based targeted proteomics, by which viral proteins can be rapidly detected from complex samples down to the strain-level with high sensitivity and reproducibility. Developing such targeted assays involves tedious steps of peptide candidate selection, peptide synthesis, and assay optimization. Peptide selection requires extensive preprocessing by comparing candidate peptides against a large search space of background proteins. Here we present Purple (Picking unique relevant peptides for viral experiments), a software tool for selecting target-specific peptide candidates directly from given proteome sequence data. It comes with an intuitive graphical user interface, various parameter options and a threshold-based filtering strategy for homologous sequences. Purple enables peptide candidate selection across various taxonomic levels and filtering against backgrounds of varying complexity. Its functionality is demonstrated using data from different virus species and strains. Our software enables to build taxon-specific targeted assays and paves the way to time-efficient and robust viral diagnostics using targeted proteomics. Full article
(This article belongs to the Special Issue Virus Bioinformatics)
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12 pages, 7710 KiB  
Article
Ammonia Distribution Measurement on a Hot Gas Test Bench Applying Tomographical Optical Methods
by Bernhard Fischbacher, Bernhard Lechner and Bernhard Brandstätter
Sensors 2019, 19(4), 896; https://doi.org/10.3390/s19040896 - 21 Feb 2019
Cited by 4 | Viewed by 4853
Abstract
Measuring the distribution of gas concentration is a very common problem in a variety of technological fields. Depending on the detectability of the gas, as well as the technological progress of the sector, different methods are used. In this paper, we present a [...] Read more.
Measuring the distribution of gas concentration is a very common problem in a variety of technological fields. Depending on the detectability of the gas, as well as the technological progress of the sector, different methods are used. In this paper, we present a device and methods to detect the ammonia concentration distribution in the exhaust system of diesel engines in order to increase the performance of the exhaust aftertreatment system. The device has been designed for usage on a hot gas test bench simulating exhaust gas conditions. It consists of multiple optical beams measuring ammonia line concentrations by applying nondispersive absorption spectroscopy in the deep ultraviolet region. The detectors consist of photodiodes allowing high sampling rates up to 3 kHz while providing a high signal-to-noise ratio. A detection limit of only 1 ppm has been achieved despite the short path length of only eight centimeters. The obtained line concentrations form an inverse problem. The methodology of the tomographic techniques is described in detail in order to best solve the inverse problem and obtain the ammonia concentration distribution images for each time step. Full article
(This article belongs to the Special Issue Eurosensors 2018 Selected Papers)
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4 pages, 504 KiB  
Proceeding Paper
Tomographic Measurement of Ammonia Distribution on a Hot Gas Test Bench
by Bernhard Fischbacher, Bernhard Lechner and Bernhard Brandstätter
Proceedings 2018, 2(13), 876; https://doi.org/10.3390/proceedings2130876 - 30 Nov 2018
Viewed by 1552
Abstract
In situ optical measurement systems for gas detection with high temporal resolution enable new possibilities of detection opportunities for continuous pipe gas streams. A tomographic absorption-based measurement system has been developed to detect the ammonia (NH3) concentration distribution within an exhaust [...] Read more.
In situ optical measurement systems for gas detection with high temporal resolution enable new possibilities of detection opportunities for continuous pipe gas streams. A tomographic absorption-based measurement system has been developed to detect the ammonia (NH3) concentration distribution within an exhaust pipe on a hot gas test bench. Multiple ammonia line concentrations are measured in situ by applying nondispersive absorption spectroscopy in the deep ultraviolet (DUV) region. The detectors consist of photodiodes in combination with optimized transimpedance amplifiers (TIV) allowing high sampling rates up to 3 kHz while providing a high signal-to-noise ratio (SNR). Despite the short path length of only eight centimeters a detection limit of 1 ppm has been achieved. Full article
(This article belongs to the Proceedings of EUROSENSORS 2018)
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