Exogenous Allantoin Enhances Drought Tolerance in Cucumber by Activating CsCER1-Mediated Cuticular Wax Biosynthesis
Highlights
- Exogenous allantoin increases water-use efficiency (WUE) in cucumber plants while also enhancing drought tolerance by promoting cuticular wax deposition.
- Multi-omics analyses identify CsCER1, encoding a very-long-chain aldehyde decarbonylase, as a core allantoin-responsive gene essential for cuticular wax biosynthesis.
- VIGS-mediated silencing of CsCER1 significantly reduces allantoin-induced drought tolerance, demonstrating that CsCER1 is a key functional gene for allantoin-mediated drought resistance.
Abstract
1. Introduction
2. Materials and Methods
2.1. Plant Materials and Growth Conditions
2.2. Experiment on Exogenous Allantoin Treatment and Drought Stress
2.3. Measurement of Photosynthetic Gas Exchange Parameters and Physiological Indices
2.4. Determination of Water Loss Rate of Detached Leaves
2.5. Determination of Total Wax Content and Scanning Electron Microscopy
2.6. Transcriptomic Analysis
2.7. Metabolomics Analysis
2.8. Multi-Omics Integrated Analysis
2.9. Virus-Induced Gene Silencing
2.10. RNA Extraction and qRT-PCR Analysis
2.11. Data Statistics and Analysis
3. Results
3.1. Exogenous Allantoin Enhances Plant Photosynthetic Capacity and Water-Use Efficiency
3.2. Multi-Omics Analysis Reveals That Allantoin Activates Lipid Metabolic Pathways
3.3. Integrated Transcriptomic and Metabolomic Analysis Identifies Cutin, Suberin, and Wax Biosynthesis as Key Responsive Pathways
3.4. CsCER1 Is a Key Responsive Gene in Allantoin-Induced Cuticle Wax Biosynthesis
3.5. Cumulative Induction of CsCER1 Expression in Aboveground Parts of Cucumber and Universal Accumulation of Cuticular Wax by Allantoin
3.6. Silencing CsCER1 Impairs Allantoin-Induced Cuticular Wax Accumulation and Drought Tolerance in Cucumber
4. Discussion
4.1. Allantoin Synergistically Promotes Enhanced Photosynthesis and Cuticular Wax Synthesis
4.2. CsCER1 Is a Key Responsive Gene for Allantoin-Induced Wax Accumulation
4.3. CsCER1 Is Required for Allantoin-Induced Drought Tolerance
4.4. Allantoin-Induced Wax Deposition in Aboveground Parts and Its Varietal Universality
5. Conclusions

Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
References
- Benmrid, B.; Ghoulam, C.; Zeroual, Y.; Kouisni, L.; Bargaz, A. Bioinoculants as a means of increasing crop tolerance to drought and phosphorus deficiency in legume-cereal intercropping systems. Commun. Biol. 2023, 6, 1016. [Google Scholar] [CrossRef] [PubMed]
- Janni, M.; Maestri, E.; Gullì, M.; Marmiroli, M.; Marmiroli, N. Plant responses to climate change, how global warming may impact on food security: A critical review. Front. Plant Sci. 2024, 14, 1297569. [Google Scholar] [CrossRef] [PubMed]
- Das, A.; Munshi, A.D.; Raju, D.; Kumar, S.; Singh, D.; Talukdar, A.; Hongal, D.; Iquebal, M.A.; Kumar, S.; Bhattacharya, R.C.; et al. Key physiological traits for drought tolerance identified through phenotyping a large set of slicing cucumber (Cucumis sativus L.) genotypes under field and water-stress conditions. Genet. Resour. Crop Evol. 2024, 71, 1855–1868. [Google Scholar] [CrossRef]
- Nandi, S.; Das, A.; Munshi, A.D.; Vikrant, V.; Kumari, K.; Choudhary, H.; Sureja, A.K.; Talukdar, A.; Raju, D.; Singh, B.; et al. Tissue‑specific response in seedling stage reveals key physio‑biochemical and molecular network associated with drought tolerance in cucumber. Sci. Hortic. 2025, 342, 114009. [Google Scholar] [CrossRef]
- Wang, S.; Ma, Q.; Li, C.; Li, Y.; Wang, Y.; Zhang, Y. Chloroplast responses to drought: Integrative mechanisms and mitigation strategies. Int. J. Mol. Sci. 2025, 26, 11872. [Google Scholar] [CrossRef] [PubMed]
- Chaves, M.M.; Flexas, J.; Pinheiro, C. Photosynthesis under drought and salt stress: Regulation mechanisms from whole plant to cell. Ann. Bot. 2009, 103, 551–560. [Google Scholar] [CrossRef]
- Shang, Y.; Ma, Y.; Zhou, Y.; Zhang, , H.; Duan, L.; Chen, H.; Zeng, J.; Zhou, Q.; Wang, S.; Gu, W.; et al. Biosynthesis, regulation, and domestication of bitterness in cucumber. Science 2014, 346, 1084–1088. [Google Scholar] [CrossRef] [PubMed]
- Smiti, K.; Mina, U.; Verma, M.; Arya, L. Impact of climate extremes and other key abiotic stresses on cucurbits: A systematic review. Vegetos 2025, 1–21. [Google Scholar] [CrossRef]
- Huot, B.; Yao, J.; Montgomery, B.L.; He, S.Y. Growth–defense tradeoffs in plants: A balancing act to optimize fitness. Mol. Plant 2014, 7, 1267–1287. [Google Scholar] [CrossRef] [PubMed]
- Panda, S.; Kazachkova, Y.; Aharoni, A. Catch-22 in specialized metabolism: Balancing defense and growth. J. Exp. Bot. 2021, 72, 6027–6041. [Google Scholar] [CrossRef] [PubMed]
- Campos, M.L.; Yoshida, Y.; Major, I.T.; Ferreira, D.O.; Weraduwage, S.M.; Froehlich, J.E.; Johnson, B.F.; Kramer, D.M.; Jander, G.; Sharkey, T.D.; et al. Rewiring of jasmonate and phytochrome B signalling uncouples plant growth-defense tradeoffs. Nat. Commun. 2016, 7, 12570. [Google Scholar] [CrossRef] [PubMed]
- Majchrzak, L.; Xiao, J.; Li, R.; Zhang, Y.; Wang, X.; Chen, Y.; Liu, Z.; Yang, H. A synthetic jasmonate receptor agonist uncouples the growth–defense trade-off in rice. Proc. Natl. Acad. Sci. USA 2025, 122, e2505675122. [Google Scholar] [CrossRef] [PubMed]
- Li, C.; Xu, M.X.; Cai, X.; Wang, Y.; Liu, J.; Sun, Y.; Chen, R.; Wu, J.; Zhang, X. Jasmonate signaling pathway modulates plant defense, growth, and their trade-offs. Int. J. Mol. Sci. 2022, 23, 3945. [Google Scholar] [CrossRef] [PubMed]
- Takagi, H.; Ishiga, Y.; Watanabe, S.; Matsumoto, M.; Hakomori, Y.; Shimada, H.; Sakamoto, A. Allantoin, a stress-related purine metabolite, can activate jasmonate signaling in a MYC2-regulated and abscisic acid-dependent manner. J. Exp. Bot. 2016, 67, 2519–2532. [Google Scholar] [CrossRef] [PubMed]
- Kaur, R.; Chandra, J.; Varghese, B.; Keshavkant, S. Allantoin: A potential compound for the mitigation of adverse effects of abiotic stresses in plants. Plants 2023, 12, 3059. [Google Scholar] [CrossRef] [PubMed]
- Kaur, H.; Chowrasia, S.; Gaur, V.S.; Mondal, T.K. Allantoin: Emerging role in plant abiotic stress tolerance. Plant Mol. Biol. Rep. 2021, 39, 648–661. [Google Scholar] [CrossRef]
- Watanabe, S.; Matsumoto, M.; Hakomori, Y.; Takagi, H.; Shimada, H.; Sakamoto, A. The purine metabolite allantoin enhances abiotic stress tolerance through synergistic activation of abscisic acid metabolism. Plant Cell Environ. 2014, 37, 1022–1036. [Google Scholar] [CrossRef] [PubMed]
- Raihan, M.R.H.; Rahman, M.; Rastogi, A.; Fujita, M.; Hasanuzzaman, M. Exogenous allantoin confers rapeseed (Brassica campestris) tolerance to simulated drought by improving antioxidant metabolism and physiology. Antioxidants 2023, 12, 1508. [Google Scholar] [CrossRef] [PubMed]
- Lu, S.; Jia, Z.C.; Meng, X.F.; Chen, Y.; Zhang, L.; Wang, P.; Liu, Q.; Zhao, S.; Li, X. Combined metabolomic and transcriptomic analysis reveals allantoin enhances drought tolerance in rice. Int. J. Mol. Sci. 2022, 23, 14172. [Google Scholar] [CrossRef] [PubMed]
- Thu, S.W.; Collier, R.; Gandin, A.; Sitton, C.C.; Tegeder, M. Role of ureides in source-to-sink transport of photoassimilates in non-fixing soybean. J. Exp. Bot. 2020, 71, 4495–4511. [Google Scholar] [CrossRef] [PubMed]
- Thu, S.W.; Tegeder, M. Enhanced ureide partitioning improves soybean performance under drought stress. J. Exp. Bot. 2025, 76, 2786–2808. [Google Scholar] [CrossRef] [PubMed]
- Arya, G.C.; Sarkar, S.; Manasherova, E.; Aharoni, A.; Cohen, H. The plant cuticle: An ancient guardian barrier set against long-standing rivals. Front. Plant Sci. 2021, 12, 663165. [Google Scholar] [CrossRef] [PubMed]
- Lewandowska, M.; Keyl, A.; Feussner, I. Wax biosynthesis in response to danger: Its regulation upon abiotic and biotic stress. New Phytol. 2020, 227, 698–713. [Google Scholar] [CrossRef] [PubMed]
- Wu, W.; Jiang, B.; Liu, R.; Han, Y.; Fang, X.; Mu, H.; Farag, M.A.; Simal-Gandara, J.; Prieto, M.A.; Chen, H.; et al. Structures and functions of cuticular wax in postharvest fruit and its regulation: A comprehensive review with future perspectives. Engineering 2023, 23, 118–129. [Google Scholar] [CrossRef]
- Pascal, S.; Bernard, A.; Deslous, P.; Gronnier, J.; Fournier-Goss, A.; Domergue, F.; Rowland, O.; Joubès, J. Arabidopsis CER1-LIKE1 functions in a cuticular very-long-chain alkane-forming complex. Plant Physiol. 2019, 179, 415–432. [Google Scholar] [CrossRef]
- Youssif, N.E.E.; Yang, B.; Huang, H.; Amar, M.H.; Ezzat, M.; Belal, M.; Zaghlool, S.A.M.; Zhao, H.; Fu, D.; Lü, S. Comparative genomic analysis and functional identification of CER1 and CER3 homologs in rice wax synthesis. Biology 2026, 15, 166. [Google Scholar] [CrossRef] [PubMed]
- Gao, Y.; Zhang, Z.; Cheng, J.; Xian, X.; Li, C.; Wang, Y. Genome-wide identification of the CER1 gene family in apple and response of MdCER1-1 to drought stress. Funct. Integr. Genom. 2023, 23, 17. [Google Scholar] [CrossRef]
- Zhu, H.-X.; Huang, J.-F.; Cao, J.-F.; Wang, L.-J.; Huang, J.-Q. SPL1 positively regulates cuticular ridge wax biosynthesis in Arabidopsis. Plant Stress 2025, 16, 100872. [Google Scholar] [CrossRef]
- Bourdenx, B.; Bernard, A.; Domergue, F.; Pascal, S.; Léger, A.; Roby, D.; Pervent, M.; Vile, D.; Haslam, R.P.; Napier, J.A.; et al. Overexpression of Arabidopsis ECERIFERUM1 promotes wax very-long-chain alkane biosynthesis and influences plant response to biotic and abiotic stresses. Plant Physiol. 2011, 156, 29–45. [Google Scholar] [CrossRef] [PubMed]
- Wang, W.; Zhang, Y.; Xu, C.; Ren, J.; Liu, X.; Black, K.; Gai, X.; Wang, Q.; Ren, H. Cucumber ECERIFERUM1 (CsCER1), which influences the cuticle properties and drought tolerance of cucumber, plays a key role in VLC alkanes biosynthesis. Plant Mol. Biol. 2015, 87, 219–233. [Google Scholar] [CrossRef]
- An, S.; Hwang, H.; Chun, C.; Jang, Y.; Lee, H.J.; Wi, S.H.; Yeo, K.H.; Yu, I.; Kwack, Y. Evaluation of air temperature, photoperiod and light intensity conditions to produce cucumber scions and rootstocks in a plant factory with artificial lighting. Horticulturae 2021, 7, 102. [Google Scholar] [CrossRef]
- Li, S.; Huang, M.; Di, Q.; Ji, T.; Wang, X.; Wei, M.; Shi, Q.; Li, Y.; Gong, B.; Yang, F. The functions of a cucumber phospholipase D alpha gene (CsPLDα) in growth and tolerance to hyperosmotic stress. Plant Physiol. Biochem. 2015, 97, 175–186. [Google Scholar] [CrossRef] [PubMed]
- Koes, R.; Verweij, W.; Quattrocchio, F. Flavonoids: A colorful model for the regulation and evolution of biochemical pathways. Trends Plant Sci. 2005, 10, 236–242. [Google Scholar] [CrossRef] [PubMed]
- Zhou, L.; Ni, E.; Yang, J.; Zhou, H.; Liang, H.; Li, J.; Jiang, D.; Wang, Z.; Liu, Z.; Zhuang, C. Rice OsGL1-6 is involved in leaf cuticular wax accumulation and drought resistance. PLoS ONE 2013, 8, e65139. [Google Scholar] [CrossRef] [PubMed]
- Kim, R.J.; Lee, S.B.; Pandey, G.; Suh, M.C. Functional conservation of an AP2/ERF transcription factor in cuticle formation suggests an important role in the terrestrialization of early land plants. J. Exp. Bot. 2022, 73, 7450–7466. [Google Scholar] [CrossRef] [PubMed]
- Li, B.; Dewey, C.N. RSEM: Accurate transcript quantification from RNA-seq data with or without a reference genome. BMC Bioinform. 2011, 12, 323. [Google Scholar] [CrossRef] [PubMed]
- Ren, Y.; Yu, G.; Shi, C.; Liu, L.; Guo, Q.; Han, C.; Zhang, D.; Zhang, L.; Liu, B.; Gao, H. Majorbio cloud: A one-stop, comprehensive bioinformatic platform for multiomics analyses. iMeta 2022, 1, e12. [Google Scholar] [CrossRef] [PubMed]
- Song, J.; Zhu, Z.; Zhang, T.; Meng, X.; Zhang, W.; Gao, P. Genome-wide identification, evolutionary analysis, and functional studies of APX genes in melon (Cucumis melo L.). Int. J. Mol. Sci. 2023, 24, 17571. [Google Scholar] [CrossRef] [PubMed]
- Wan, L.L.; Wang, Z.R.; Tang, M.; Zhang, X.J.; Ren, J.; Zeng, H.X.; Zhang, N.; Wei, J.Q.; Xiong, J.S. Optimization of CGMMV-VIGS System in Cucurbit Crops. Chin. Agric. Sci. Bull. 2024, 40, 40–47. [Google Scholar] [CrossRef]
- Sestari, I.; Campos, M.L. Into a dilemma of plants: The antagonism between chemical defenses and growth. Plant Mol. Biol. 2022, 109, 469–482. [Google Scholar] [CrossRef] [PubMed]
- Züst, T.; Agrawal, A.A. Trade-offs between plant growth and defense against insect herbivory: An emerging mechanistic synthesis. Annu. Rev. Plant Biol. 2017, 68, 513–534. [Google Scholar] [CrossRef] [PubMed]
- Wilkinson, S.; Davies, W.J. ABA-based chemical signalling: The co-ordination of responses to stress in plants. Plant Cell Environ. 2002, 25, 195–210. [Google Scholar] [CrossRef] [PubMed]
- Flexas, J. Drought-inhibition of photosynthesis in C3 plants: Stomatal and non-stomatal limitations revisited. Ann. Bot. 2002, 89, 183–189. [Google Scholar] [CrossRef] [PubMed]
- Riederer, M.; Schreiber, L. Protecting against water loss: Analysis of the barrier properties of plant cuticles. J. Exp. Bot. 2001, 52, 2023–2032. [Google Scholar] [CrossRef] [PubMed]
- Guo, J.; Xu, W.; Yu, X.; Shen, H.; Li, H.; Cheng, D.; Liu, A.; Liu, J.; Liu, C.; Zhao, S.; et al. Cuticular wax accumulation is associated with drought tolerance in wheat near-isogenic lines. Front. Plant Sci. 2016, 7, 1809. [Google Scholar] [CrossRef] [PubMed]
- Han, D.; Lu, J.; Zhao, C.; Ali, S.; Jiang, Z. The role and regulatory mechanisms of cuticular wax in crop stress tolerance and yield. Plants 2026, 15, 554. [Google Scholar] [CrossRef] [PubMed]
- Jiang, J.; Zheng, X.; He, T.; Liu, X.; Zhao, Q.; Tan, W.; Xiong, L.; Li, B.; Yin, H.; Agyei, G.D.; et al. The function of PpKCS6 in regulating cuticular wax synthesis and drought resistance of Kentucky bluegrass. Plant Cell Environ. 2025, 48, 4643–4655. [Google Scholar] [CrossRef] [PubMed]
- Wen, J.; Xia, W.; Wang, Y.; Li, J.; Guo, R.; Zhao, Y.; Fen, J.; Duan, X.; Wei, G.; Wang, G.; et al. Pathway elucidation and heterologous reconstitution of the long-chain alkane pentadecane biosynthesis from Pogostemon cablin. Plant Biotechnol. J. 2025, 23, 564–578. [Google Scholar] [CrossRef] [PubMed]
- Li, S.; Zhang, X.; Huang, H.; Yin, M.; Jenks, M.A.; Kosma, D.K.; Yang, P.; Yang, X.; Zhao, H.; Lü, S. Deciphering the core shunt mechanism in Arabidopsis cuticular wax biosynthesis and its role in plant environmental adaptation. Nat. Plants 2025, 11, 165–175. [Google Scholar] [CrossRef] [PubMed]
- Bernard, A.; Domergue, F.; Pascal, S.; Jetter, R.; Renne, C.; Faure, J.-D.; Haslam, R.P.; Napier, J.A.; Lessire, R.; Joubès, J. Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. Plant Cell 2012, 24, 3106–3118. [Google Scholar] [CrossRef] [PubMed]
- Busta, L.; Jetter, R. Moving beyond the ubiquitous: The diversity and biosynthesis of specialty compounds in plant cuticular waxes. Phytochem. Rev. 2018, 17, 1275–1304. [Google Scholar] [CrossRef]
- Lee, S.B.; Kim, H.U.; Suh, M.C. MYB94 and MYB96 additively activate cuticular wax biosynthesis in Arabidopsis. Plant Cell Physiol. 2016, 57, 2300–2311. [Google Scholar] [CrossRef] [PubMed]
- Seo, P.J.; Lee, S.B.; Suh, M.C.; Park, M.-J.; Go, Y.S.; Park, C.-M. The MYB96 transcription factor regulates cuticular wax biosynthesis under drought conditions in Arabidopsis. Plant Cell 2011, 23, 1138–1152. [Google Scholar] [CrossRef] [PubMed]
- Urano, K.; Oshima, Y.; Ishikawa, T.; Kajino, T.; Sakamoto, S.; Sato, M.; Toyooka, K.; Fujita, M.; Kawai-Yamada, M.; Taji, T.; et al. Arabidopsis DREB26/ERF12 and its close relatives regulate cuticular wax biosynthesis under drought stress condition. Plant J. 2024, 120, 2057–2075. [Google Scholar] [CrossRef] [PubMed]
- Xie, J.; Yang, L.; Hu, W.; Song, J.; Kuang, L.; Huang, Y.; Liu, D.; Liu, Y. The CsMYB44-csi-MIR0008-CsCER1 module regulates cuticular wax biosynthesis and drought tolerance in citrus. New Phytol. 2025, 246, 1757–1779. [Google Scholar] [CrossRef] [PubMed]
- Zhao, Y.; Liu, Q.; Wang, X.; Zhang, W.; Xu, W.; Zhang, Y.; Liu, B. ZmCER1, a putative ECERIFERUM 1 protein in maize, functions in cuticular wax biosynthesis and bulliform cell development. Crop J. 2024, 12, 743–752. [Google Scholar] [CrossRef]
- Wu, H.; Liu, L.; Chen, Y.; Liu, T.; Jiang, Q.; Wei, Z.; Li, C.; Wang, Z. Tomato SlCER1–1 catalyzes the synthesis of wax alkanes, increasing drought tolerance and fruit storability. Hortic. Res. 2022, 9, uhac004. [Google Scholar] [CrossRef] [PubMed]
- Dang, Q.H.; Suh, M.C. How plants adapt surface lipids to environmental changes. Nat. Plants 2025, 11, 159–160. [Google Scholar] [CrossRef] [PubMed]
- Liu, Y.; Chen, B.; Qin, Z.; Jiang, P.; Yang, Y.; Wang, C.; Xing, T.; Li, F.; Du, L.; Li, S.; et al. TaFAR5-TaFAR3 module regulates cuticular wax biosynthesis and drought tolerance in wheat. New Phytol. 2025, 248, 1802–1821. [Google Scholar] [CrossRef] [PubMed]






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Wang, W.; Yan, C.; Yang, X.; Liu, C.; Yan, Z.; Liu, D.; Zhang, T.; Feng, G. Exogenous Allantoin Enhances Drought Tolerance in Cucumber by Activating CsCER1-Mediated Cuticular Wax Biosynthesis. Horticulturae 2026, 12, 798. https://doi.org/10.3390/horticulturae12070798
Wang W, Yan C, Yang X, Liu C, Yan Z, Liu D, Zhang T, Feng G. Exogenous Allantoin Enhances Drought Tolerance in Cucumber by Activating CsCER1-Mediated Cuticular Wax Biosynthesis. Horticulturae. 2026; 12(7):798. https://doi.org/10.3390/horticulturae12070798
Chicago/Turabian StyleWang, Weiyi, Chengbo Yan, Xiaoxu Yang, Chang Liu, Zhishan Yan, Dajun Liu, Taifeng Zhang, and Guojun Feng. 2026. "Exogenous Allantoin Enhances Drought Tolerance in Cucumber by Activating CsCER1-Mediated Cuticular Wax Biosynthesis" Horticulturae 12, no. 7: 798. https://doi.org/10.3390/horticulturae12070798
APA StyleWang, W., Yan, C., Yang, X., Liu, C., Yan, Z., Liu, D., Zhang, T., & Feng, G. (2026). Exogenous Allantoin Enhances Drought Tolerance in Cucumber by Activating CsCER1-Mediated Cuticular Wax Biosynthesis. Horticulturae, 12(7), 798. https://doi.org/10.3390/horticulturae12070798
