High Prevalence of Multiple Antibiotic-Resistant, Extended-Spectrum β-Lactamase (ESBL)-Producing Escherichia coli in Fresh Seafood Sold in Retail Markets of Mumbai, India
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sample Collection, Isolation and Identification of Escherichia coli From Seafood
2.2. Antibiotic Susceptibility Tests
2.3. Detection of ESBL and MBL Phenotypes
2.4. Detection of Antibiotic Resistance Genes
3. Results and Discussion
3.1. Distribution of ESBL+ E. coli in Seafood
3.2. Antibiotic Resistance Profiles of E. coli
3.3. Molecular Characterization of ESBL+ E. coli
3.4. Detection of Carbapenemase-Encoding Genes
3.5. Multidrug Resistance in Seafood E. coli
4. Conclusions
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Sl. No. | Samples | No. Analysed | No. of E. coli Isolated | No. (%) ESBL+ E. coli |
---|---|---|---|---|
Finfish | ||||
1. | Sardinella longiceps | 5 | 32 | 24 (75) |
2. | Terapon jarbua | 5 | 29 | 29 (100) |
3. | Otolithes cuvieri | 3 | 19 | 19 (100) |
4. | Epinephelus diacanthus | 2 | 15 | 15 (100) |
5. | Nemipterus randalli | 2 | 22 | 14 (64.28) |
6. | Mene maculata | 2 | 24 | 13 (53.84) |
7. | Coilia dussumieri | 3 | 45 | 32 (71.87) |
8. | Harpadon nehereus | 4 | 42 | 35 (82.85) |
9. | Trichiurus lepturus | 2 | 21 | 12 (58.33) |
10. | Priacanthus hamrur | 2 | 19 | 13 (69.23) |
11. | Megalaspis cordyla | 2 | 25 | 25 (100) |
12. | Anodontostoma chacunda | 3 | 13 | 13 (100) |
13. | Pampus argenteus | 2 | 19 | 17 (88.23) |
Shellfish | ||||
14. | Acetes indicus | 5 | 56 | 27 (48.21) |
15. | Metapenaeus dobsoni | 3 | 41 | 19 (73.68) |
16. | Meretrix meretrix | 3 | 26 | 18 (44.44) |
17. | Loligo duvauceli | 2 | 27 | 15 (26.66) |
Total | 50 | 475 | 340 (71.58) |
Antibiotic Tested | No. (%) Resistant | No. (%) Intermediate Resistant | No. (%) Susceptible |
---|---|---|---|
Cefoxitin (CX) 30 mcg | 66 (19.41%) | 47 (13.82%) | 227 (66.76%) |
Cefotaxime (CTX) 30 mcg | 323 (95%) | 12 (3.53%) | 5 (1.47%) |
Ceftazidime (CAZ) 30mcg | 307 (90.29%) | 26 (7.65%) | 7 (2.05%) |
Cefpodoxime (CPD) 10 mcg | 309 (90.88%) | 17 (5.0%) | 14 (4.11%) |
Imipenem (IPM) 10mcg | 31 (9.11%) | 56 (16.47%) | 253 (74.41%) |
Ertapenem (ETP) 10 mcg | 107 (31.47%) | 81 (23.82%) | 152 (44.71%) |
Meropenem (MRP) 10 mcg | 87 (25.58%) | 79 (23.24%) | 174 (51.18%) |
Ciprofloxacin (CIP) 5mcg | 152 (44.71%) | 43 (12.65%) | 145 (42.65%) |
Aztreonam (AT) 30 mcg | 219 (64.41%) | 57 (16.76%) | 64 (18.82%) |
Amoxyclav (AMC) 30 mcg | 127 (37.35%) | 83 (24.41%) | 130 (38.24%) |
Piperacillin/Taz 100/10mcg | 114 (33.53%) | 95 (27.94%) | 131 (38.53%) |
Samples Analysed (No.) | No. of E. coli Isolated | No. (%) ESBL+ | No. (%) CTX-M+ | No. (%) SHV+ | No. (%) TEM+ | No. (%) OXA+ | No. (%) VIM+ | No. (%) NDM+ |
---|---|---|---|---|---|---|---|---|
Sardinella longiceps (5) | 32 | 24 (75) | 22 (91.66) | 3 (12.5) | 3 (12.5) | 3 (12.5) | 1 (3.13) | 3 (9.38) |
Terapon jarbua (5) | 29 | 29 (100) | 18 (62.06) | 1 (3.45) | - | 1 (3.45) | 1 (3.45) | - |
Otolithes cuvieri (3) | 19 | 19 (100) | 17 (89.47) | 3 (15.79) | 1(5.26) | 1(5.26) | 1 (5.26) | 3 (15.78) |
Epinephelus diacanthus (2) | 15 | 15 (100) | 13 (86.66) | - | 1 (6.67) | 1(6.67) | - | 1 (6.66) |
Nemipterus randalli (2) | 22 | 14 (64.28) | 5 (35.71) | 5 (35.71) | - | - | - | 2 (9.09) |
Mene maculata (2) | 24 | 13 (53.84) | 5 (38.46) | 2 (15.38) | - | - | - | - |
Coilia dussumieri (3) | 45 | 32 (71.87) | 25 (78.13) | 7 (21.86) | 1 (3.13) | 7 (21.88) | - | 3 (6.66) |
Harpadon nehereus (4) | 42 | 35 (82.85) | 27 (77.14) | 7 (20) | 1 (2.86) | 4 (11.43) | - | 1 (2.38) |
Trichiurus lepturus (2) | 21 | 12 (58.33) | 5 (41.67) | 9 (75) | - | - | - | 2 (9.52) |
Priacanthus hamrur (2) | 19 | 13 (69.23) | 3 (23.08) | 7 (53.85) | - | - | - | - |
Megalaspis cordyla (2) | 25 | 25 (100) | 9 (36) | 11 (44) | - | 1 (4) | - | 2 (8) |
Anodontostoma chacunda (3) | 13 | 13 (100) | 4 (30.77) | - | - | 1 (7.69) | - | - |
Pampus argenteus (2) | 19 | 17 (88.23) | 13 (76.47) | 9 (52.94) | - | 2 (11.76) | - | - |
Acetes indicus (5) | 27 | 27 (100) | 23 (85.19) | 12 (44.44) | - | 1 (3.70) | - | 2 (7.4) |
Metapenaeus dobsoni (3) | 26 | 19 (73.68) | 11 (57.89) | 2 (10.53) | 2 (10.53) | 1 (5.26) | - | - |
Meretrix meretrix (3) | 41 | 18 (44.44) | 9 (50) | 1 (5.56) | - | 1 (5.56) | - | 2 (4.88) |
Loligo duvauceli (2) | 56 | 15 (26.66) | 3 (20) | - | - | - | - | - |
Total | 475 | 340 (71.58) | 212 (62.35) | 79 (21.35) | 9 (2.65) | 24 (7.06) | 3 (0.88) | 21 (4.42) |
No. of Antibiotic | MAR Index | No. (%) of Isolates |
---|---|---|
1 | 0.09 | 9 (2.64) |
2 | 0.18 | 7 (2.06) |
3 | 0.27 | 71 (20.88) |
4 | 0.36 | 11 (3.24) |
5 | 0.45 | 102 (30) |
6 | 0.55 | 13 (3.82) |
7 | 0.64 | 53 (15.59) |
9 | 0.82 | 41 (12.06) |
11 | 1.00 | 21 (6.18) |
Isolate No. | Source | Resistance Genotype | Antibiotic Resistance Profile | Antibiotic to which Susceptible |
---|---|---|---|---|
EC21 | Sardinella longiceps | blaCTX-M, blaSHV, blaTEM, blaNDM, blaOXA, blaVIM | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC123 | Terapon jarbua | blaCTX-M, blaSHV, blaOXA,blaVIM | CX, CTX, CAZ, CPD, MRP, AT | IPM, CIP, ETP, AMC, PIT |
EC31 | Otolithes cuvieri | blaCTX-M, blaSHV, blaTEM, blaNDM, blaOXA, blaVIM | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC91 | Epinephelus diacanthus | blaCTX-M, blaTEM, blaNDM, blaOXA | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC81 | Nemipterus randalli | blaCTX-M, blaSHV, blaNDM | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC13 | Mene maculata | blaCTX, blaSHV | CX, CTX, CAZ, CPD, CIP, AT | IPM, MRP, ETP, AMC, PIT |
EC221 | Coilia dussumieri | blaCTX-M, blaSHV, blaTEM, blaNDM, blaOXA | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC201 | Harpadon nehereus | blaCTX-M, blaSHV, blaTEM, blaNDM, blaOXA | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC303 | Trichiurus lepturus | blaCTX-M, blaSHV, blaNDM | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC48 | Priacanthus hamrur | blaCTX, blaSHV | CX, CTX, CAZ, CPD, CIP, AT, AMC, PIT | IPM, ETP, MRP |
EC51 | Megalaspis cordyla | blaCTX-M, blaSHV, blaNDM, blaOXA | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC253 | Anodontostoma chacunda | blaCTX, blaOXA | CX, CTX, CAZ, CPD, CIP, AT, ETP | IPM, MRP, AMC, PIT |
EC271 | Pampus argenteus | blaCTX-M, blaSHV, blaOXA | CX, CTX, CAZ, CPD, CIP, AT, PIT | IPM, ETP, MRP, AMC |
EC281 | Acetes indicus | blaCTX-M, blaSHV, blaNDM, blaOXA | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC253 | Metapenaeus dobsoni | blaCTX-M, blaSHV, blaTEM, blaOXA | CX, CTX, CAZ, CPD, IPM, CIP, AT, AMC, PIT | IPM, AMC, PIT |
EC305 | Meretrix meretrix | blaCTX-M, blaSHV, blaNDM, blaOXA | CX, CTX, CAZ, CPD, IPM, ETP, MRP, CIP, AT, AMC, PIT | CL |
EC131 | Loligo duvauceli | blaCTX-M | CX, CTX, CAZ, CPD, CIP | IPM, ETP, MRP, AMC, PIT |
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Singh, A.S.; Nayak, B.B.; Kumar, S.H. High Prevalence of Multiple Antibiotic-Resistant, Extended-Spectrum β-Lactamase (ESBL)-Producing Escherichia coli in Fresh Seafood Sold in Retail Markets of Mumbai, India. Vet. Sci. 2020, 7, 46. https://doi.org/10.3390/vetsci7020046
Singh AS, Nayak BB, Kumar SH. High Prevalence of Multiple Antibiotic-Resistant, Extended-Spectrum β-Lactamase (ESBL)-Producing Escherichia coli in Fresh Seafood Sold in Retail Markets of Mumbai, India. Veterinary Sciences. 2020; 7(2):46. https://doi.org/10.3390/vetsci7020046
Chicago/Turabian StyleSingh, Asem Sanjit, Binaya Bhusan Nayak, and Sanath H. Kumar. 2020. "High Prevalence of Multiple Antibiotic-Resistant, Extended-Spectrum β-Lactamase (ESBL)-Producing Escherichia coli in Fresh Seafood Sold in Retail Markets of Mumbai, India" Veterinary Sciences 7, no. 2: 46. https://doi.org/10.3390/vetsci7020046
APA StyleSingh, A. S., Nayak, B. B., & Kumar, S. H. (2020). High Prevalence of Multiple Antibiotic-Resistant, Extended-Spectrum β-Lactamase (ESBL)-Producing Escherichia coli in Fresh Seafood Sold in Retail Markets of Mumbai, India. Veterinary Sciences, 7(2), 46. https://doi.org/10.3390/vetsci7020046