Hierarchical Multi-View Representation Learning via Generalized Deep Non-Negative Matrix Factorization
Abstract
1. Introduction
- We propose GDNMF-MRL, a unified framework that simultaneously performs deep decomposition on both feature matrices and basis matrices, enabling hierarchical representations to be extracted at multiple levels. By integrating shallow linear components and deep nonlinear structures in a complementary manner, the proposed framework preserves both simple linear information and complex hierarchical patterns, improving the flexibility and discriminative power of the learned representations.
- We design a multi-view fusion mechanism that learns adaptive view weights while enforcing cross-view consistency through a shared consensus representation, allowing the model to effectively exploit complementary information across heterogeneous views.
- We further develop a one-step variant, OS-GDNMF-MRL, which jointly optimizes representation learning and clustering assignment within a unified objective function, enabling direct interaction between the two stages and avoiding the suboptimality of conventional two-step procedures.
- Extensive experiments on five benchmark datasets demonstrate that the proposed methods consistently outperform state-of-the-art shallow and deep multi-view clustering approaches, validating the effectiveness and robustness of the proposed framework.
2. Related Works
2.1. Single-View GDNMF
2.2. Related Work
3. Proposed Method
3.1. GDNMF-MRL Model
3.2. One-Step GDNMF-MRL
4. Optimization
4.1. GDNMF-MRL Optimization
4.2. OS-GDNMF-MRL Optimization
4.3. Convergence of the Algorithm
| Algorithm 1 OS-GDNMF-MRL Algorithm |
|
4.4. Algorithm Complexity Analysis
5. Experiments
5.1. Dataset Description
- (1)
- UCI: This dataset is obtained from the UCI Machine Learning Repository and contains 2000 handwritten digit images covering 10 digit categories, where each category includes 200 samples and is treated as a ground-truth class. Three feature views are adopted in our experiments, including intensity average features (view 1), Fourier coefficient features (view 2), and morphological features (view 3).
- (2)
- Mnist4: This dataset is a subset of the well-known MNIST handwritten digit database, consisting of four classes ranging from digit 0 to digit 3. Each class contains approximately 1000 samples.
- (3)
- MSRCV1: This dataset is a scene image collection composed of seven categories, namely trees, buildings, airplanes, cows, faces, cars, and bicycles. Each image is described using five types of features, including 24-dimensional color moments (CM), 576-dimensional histograms of oriented gradients (HOGs), 512-dimensional GIST descriptors, 256-dimensional local binary patterns (LBPs), and 254-dimensional CENTRIST features.
- (4)
- Leaf: This dataset contains 1600 samples collected from 100 plant species. Three types of features are used to describe each sample, including shape descriptors, fine-scale margin features, and texture histograms, each with 64 dimensions.
- (5)
- ALOI: This dataset consists of 11,025 images from 100 objects. Each image is represented by four different feature types, namely RGB features, HSV features, color similarity descriptors, and Haralick texture features.
5.2. Competitors and Experimental Setup
- NMF [14]: A classic matrix factorization baseline that decomposes the data matrix into two non-negative low-rank matrices. Applied independently to each view, with learned representations fused via weighted summation.
- MultiNMF [41]: Constructs view-specific low-rank representations and encourages them to converge to a shared consensus matrix, enabling cross-view information fusion.
- ECNMF [54]: Introduces exclusivity and consistency constraints into the multi-view NMF framework to simultaneously capture both complementary and shared information across views.
- 2CMV [55]: Integrates coupled matrix factorization with NMF to jointly extract shared and view-specific components, and constructs an optimal manifold to identify the most consistent latent representation across high-dimensional multi-view data.
- DMF [21]: Extends NMF to a multi-layer architecture to capture hierarchical representations. Applied to each view independently and fused via weighted summation.
- DA2NMF [56]: Adopts an autoencoder-inspired NMF architecture to extract linear low-dimensional features, while incorporating adaptive graph learning to model the nonlinear geometric structure of data. A dual auto-weighted mechanism is further designed to adaptively assign weights across different views.
- DMVC [57]: Applies deep matrix factorization to extract hierarchical features from each view, and incorporates a weight balance strategy to leverage complementary information across different views.
- GDNMF [23]: Simultaneously performs deep decomposition on both feature and basis matrices to learn hierarchical representations. Adapted to the multi-view setting by applying to each view independently.
- MDRNMF [58]: Proposes a deep NMF architecture that simultaneously performs deep decomposition on both representation and basis matrices, enabling reciprocal promotion between hierarchical representation learning and high-quality basis extraction. View-specific similarity graphs are adaptively constructed, and a Schatten p-norm-based low-rank regularization on the similarity tensor is introduced to capture high-order consistency across views.
5.3. Experimental Results and Analysis
5.4. Runtime Comparison
5.5. Parameter Sensitivity Analysis


5.6. Ablation and Convergence Study
6. Conclusions
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
References
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| Method | Deep Structure | MVC Method | Basis Decomposition | Feature Decomposition | Clustering Integration | Interpretability |
|---|---|---|---|---|---|---|
| NMF | High | |||||
| MultiNMF | ✔ | High | ||||
| ECNMF | ✔ | High | ||||
| 2CMV | ✔ | Moderate | ||||
| DMF | ✔ | ✔ | Moderate | |||
| DA2NMF | ✔ | ✔ | ✔ | Moderate | ||
| DMVC | ✔ | ✔ | ✔ | Moderate | ||
| GDNMF | ✔ | ✔ | ✔ | High | ||
| MDRNMF | ✔ | ✔ | ✔ | ✔ | Moderate | |
| GDNMF-MRL | ✔ | ✔ | ✔ | ✔ | High | |
| OS-GDNMF-MRL | ✔ | ✔ | ✔ | ✔ | ✔ | High |
| Symbol | Description |
|---|---|
| V | Number of views. |
| Numbers of basis-side and feature-side decomposition layers, respectively. | |
| n | Number of samples. |
| K | Number of clusters. |
| Hyperparameter controlling the distribution of adaptive view weights. | |
| Graph regularization parameter. | |
| Adaptive weight associated with the v-th view. | |
| Data matrix of the v-th view. | |
| Linear basis matrix for the shallow component in the v-th view. | |
| Top-layer basis matrix in the basis-side deep decomposition of the v-th view. | |
| Reconstructed basis matrix obtained from the basis-side deep decomposition of the v-th view. | |
| Interaction matrix linking the reconstructed basis and feature representations in the v-th view. | |
| Final latent representation learned from the v-th view. | |
| Reconstructed feature matrix obtained from the feature-side deep decomposition of the v-th view. | |
| Consensus latent representation shared by all views. | |
| Transformation matrix in the i-th layer of basis-side decomposition for the v-th view. | |
| Transformation matrix in the i-th layer of feature-side decomposition for the v-th view. | |
| Graph Laplacian matrix of the v-th view. | |
| View-specific centroid matrix in OS-GDNMF-MRL. | |
| Cluster indicator matrix. |
| Phase | GDNMF-MRL | OS-GDNMF-MRL |
|---|---|---|
| Initialization | ||
| Fine-tuning | ||
| Overall |
| Names | Sizes | Classes | Views | Feature Dimensions |
|---|---|---|---|---|
| UCI | 2000 | 10 | 3 | 240, 76, 6 |
| Mnist4 | 4000 | 4 | 3 | 30, 9, 30 |
| MSRCV1 | 210 | 7 | 5 | 24, 576, 512, 256, 254 |
| Leaf | 1600 | 100 | 3 | 64, 64, 64 |
| ALOI | 11,025 | 100 | 4 | 77, 13, 64, 125 |
| Methods | ACC | NMI | Purity | ARI |
|---|---|---|---|---|
| NMF | 10.60 | 10.70 | 13.25 | 0.15 |
| MultiNMF | 61.85 | 54.81 | 63.55 | 44.84 |
| ECNMF | 80.18 | 80.01 | 82.90 | 71.78 |
| DA2NMF | 85.45 | 80.45 | 85.45 | 74.82 |
| 2CMV | 75.72 | 75.90 | 75.72 | 66.15 |
| DMVC | 43.60 | 52.01 | 43.65 | 31.59 |
| DMF | 52.75 | 47.57 | 54.85 | 32.19 |
| MDRNMF | 73.70 | 76.72 | 73.90 | 64.48 |
| GDNMF | 36.25 | 44.26 | 40.70 | 30.60 |
| GDNMF-MRL | 86.35 | 79.69 | 86.35 | 79.70 |
| OS-GDNMF-MRL | 87.03 | 80.56 | 87.45 | 81.36 |
| Methods | ACC | NMI | Purity | ARI |
|---|---|---|---|---|
| NMF | 52.78 | 31.25 | 56.53 | 26.96 |
| MultiNMF | 62.82 | 41.53 | 62.82 | 34.05 |
| ECNMF | 67.99 | 54.83 | 70.73 | 48.78 |
| 2CMV | 60.26 | 60.51 | 60.26 | 62.96 |
| DMF | 56.35 | 27.00 | 56.35 | 24.55 |
| DA2NMF | 69.60 | 38.97 | 69.60 | 38.38 |
| DMVC | 44.18 | 22.87 | 49.70 | 16.59 |
| GDNMF | 25.02 | 1.06 | 25.07 | 1.78 |
| MDRNMF | 70.97 | 39.04 | 70.97 | 39.50 |
| GDNMF-MRL | 77.20 | 57.46 | 77.20 | 54.85 |
| OS-GDNMF-MRL | 80.85 | 62.84 | 80.85 | 61.08 |
| Methods | ACC | NMI | Purity | ARI |
|---|---|---|---|---|
| NMF | 29.52 | 39.55 | 47.14 | 25.41 |
| MultiNMF | 35.24 | 25.67 | 39.52 | 13.01 |
| ECNMF | 71.90 | 71.12 | 77.46 | 58.08 |
| 2CMV | 73.81 | 66.24 | 73.81 | 57.45 |
| DMF | 45.71 | 33.96 | 49.05 | 23.20 |
| DA2NMF | 71.24 | 63.47 | 71.52 | 53.25 |
| DMVC | 63.33 | 55.01 | 67.62 | 42.39 |
| GDNMF | 22.38 | 13.59 | 26.19 | 3.55 |
| MDRNMF | 72.86 | 76.41 | 72.86 | 55.14 |
| GDNMF-MRL | 73.68 | 72.34 | 76.59 | 60.12 |
| OS-GDNMF-MRL | 75.88 | 73.64 | 77.56 | 61.37 |
| Methods | ACC | NMI | Purity | ARI |
|---|---|---|---|---|
| NMF | 16.63 | 28.63 | 30.00 | 14.15 |
| MultiNMF | 76.15 | 91.75 | 79.63 | 71.08 |
| ECNMF | 80.14 | 93.57 | 83.34 | 75.87 |
| 2CMV | 70.86 | 88.23 | 70.86 | 63.47 |
| DMF | 21.88 | 51.54 | 24.63 | 7.28 |
| DA2NMF | 83.31 | 93.22 | 85.46 | 77.23 |
| DMVC | 18.94 | 48.58 | 21.19 | 5.17 |
| GDNMF | 66.69 | 85.49 | 70.63 | 58.42 |
| MDRNMF | 72.50 | 89.38 | 76.77 | 66.42 |
| GDNMF-MRL | 83.50 | 93.91 | 85.50 | 78.08 |
| OS-GDNMF-MRL | 85.75 | 95.13 | 85.75 | 80.07 |
| Methods | ACC | NMI | Purity | ARI |
|---|---|---|---|---|
| NMF | 7.71 | 32.71 | 15.90 | 3.46 |
| MultiNMF | 51.91 | 71.70 | 54.87 | 39.00 |
| ECNMF | 53.34 | 74.57 | 56.46 | 40.05 |
| 2CMV | 43.26 | 59.95 | 43.26 | 22.37 |
| DMF | 49.41 | 69.25 | 52.68 | 35.74 |
| DA2NMF | 56.07 | 75.74 | 59.26 | 43.46 |
| DMVC | 62.98 | 78.74 | 65.96 | 49.50 |
| GDNMF | 32.86 | 58.40 | 35.86 | 21.48 |
| MDRNMF | 27.73 | 47.66 | 30.47 | 11.29 |
| GDNMF-MRL | 67.36 | 80.54 | 68.93 | 55.63 |
| OS-GDNMF-MRL | 67.66 | 81.18 | 69.13 | 57.33 |
| Dataset | OS-GDNMF-MRL | GDNMF-MRL | MultiNMF | ECNMF | DA2NMF | 2CMV | DMVC | MDRNMF |
|---|---|---|---|---|---|---|---|---|
| MSRCV1 | 6.50 | 6.63 | 2.55 | 14.82 | 4.86 | 5.42 | 4.12 | 9.34 |
| Leaf | 12.58 | 10.93 | 3.86 | 98.64 | 36.42 | 9.74 | 8.36 | 45.04 |
| Mnist4 | 25.23 | 22.29 | 5.43 | 186.35 | 15.28 | 23.15 | 13.26 | 93.84 |
| UCI | 17.63 | 17.73 | 4.62 | 56.48 | 11.64 | 19.26 | 11.42 | 48.67 |
| ALOI | 118.07 | 90.58 | 33.76 | 486.72 | 126.38 | 224.18 | 92.84 | 248.12 |
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Tan, H.; Wan, Y.; Luo, G.; Sun, Z. Hierarchical Multi-View Representation Learning via Generalized Deep Non-Negative Matrix Factorization. Mathematics 2026, 14, 1442. https://doi.org/10.3390/math14091442
Tan H, Wan Y, Luo G, Sun Z. Hierarchical Multi-View Representation Learning via Generalized Deep Non-Negative Matrix Factorization. Mathematics. 2026; 14(9):1442. https://doi.org/10.3390/math14091442
Chicago/Turabian StyleTan, Hubo, Yuan Wan, Guoqing Luo, and Zaichun Sun. 2026. "Hierarchical Multi-View Representation Learning via Generalized Deep Non-Negative Matrix Factorization" Mathematics 14, no. 9: 1442. https://doi.org/10.3390/math14091442
APA StyleTan, H., Wan, Y., Luo, G., & Sun, Z. (2026). Hierarchical Multi-View Representation Learning via Generalized Deep Non-Negative Matrix Factorization. Mathematics, 14(9), 1442. https://doi.org/10.3390/math14091442
