Molecular Mechanisms and Targeted Therapies of PTPN2 in Metabolic Diseases: A Review
Abstract
1. Introduction
1.1. Overview of the Protein Tyrosine Phosphatase (PTP) Family
1.2. Structure and Function of PTPN2
2. Mechanistic Role of PTPN2 in Metabolic Diseases
2.1. PTPN2 in Type 1 Diabetes (T1D)
2.1.1. Genetic Control of PTPN2 in Type 1 Diabetes Pathogenesis
2.1.2. Environmental Control of PTPN2 in Type 1 Diabetes Pathogenesis
2.2. PTPN2 in Type 2 Diabetes (T2D)
2.2.1. PTPN2-Mediated Regulation of Insulin Resistance
2.2.2. PTPN2-Mediated Preservation of β-Cell Function in T2D
2.3. Mechanistic Role of PTPN2 in Diabetic Complications
2.4. PTPN2 in Broader Metabolic Pathologies
2.4.1. PTPN2 Regulation in Metabolic Dysfunction-Associated Steatohepatitis (MASH)
2.4.2. PTPN2 in Metabolic Bone Disease
2.5. Cross-Talk in PTPN2 Signaling: Immunoregulation and Tumorigenesis
3. Therapeutic Potential of PTPN2 Targeting in Metabolic Diseases
4. Outlook and Future Perspectives
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| PTPs | Protein tyrosine phosphatases |
| DUSPs | Dual-specificity phosphatases |
| PTPN2 | Protein tyrosine phosphatase non-receptor type 2 |
| TC-PTP | T-cell protein tyrosine phosphatase |
| PTPN1 | Protein tyrosine phosphatase non-receptor type 1 |
| NLS | Nuclear localization signal |
| T1D | Type 1 diabetes |
| SNPs | Single nucleotide polymorphisms |
| TCR | T-cell receptor |
| JAK | Janus kinase |
| STAT | Signal transducer and activator of transcription |
| CVB | Coxsackievirus B |
| ISGs | Interferon-stimulated genes |
| AgRP | Agouti-related peptide |
| IR | Insulin receptor |
| BAT | Brown adipose tissue |
| HGP | Hepatic glucose production |
| HFD | High-fat diet |
| IRS1 | Insulin Receptor Substrate 1 |
| IFN-γ | Interferon-γ |
| TNF | Tumor necrosis factor |
| IL | Interleukin |
| MASH | Metabolic dysfunction-associated steatohepatitis |
| MASLD | Metabolic dysfunction-associated steatotic liver disease |
| HCC | Hepatocellular carcinoma |
| CSF-1R | Colony-stimulating factor 1 receptor |
| Treg | Regulatory T cell |
| PROTACs | Proteolysis Targeting Chimeras |
References
- Behl, T.; Gupta, A.; Sehgal, A.; Albarrati, A.; Albratty, M.; Meraya, A.M.; Najmi, A.; Bhatia, S.; Bungau, S. Exploring protein tyrosine phosphatases (PTP) and PTP-1B inhibitors in management of diabetes mellitus. Biomed. Pharmacother. 2022, 153, 113405. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Wiede, F.; Brodnicki, T.C.; Goh, P.K.; Leong, Y.A.; Jones, G.W.; Yu, D.; Baxter, A.G.; Jones, S.A.; Kay, T.W.H.; Tiganis, T. T-Cell-Specific PTPN2 Deficiency in NOD Mice Accelerates the Development of Type 1 Diabetes and Autoimmune Comorbidities. Diabetes 2019, 68, 1251–1266. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Wiede, F.; Lu, K.H.; Du, X.; Liang, S.; Hochheiser, K.; Dodd, G.T.; Goh, P.K.; Kearney, C.; Meyran, D.; Beavis, P.A.; et al. PTPN2 phosphatase deletion in T cells promotes anti-tumour immunity and CAR T-cell efficacy in solid tumours. EMBO J. 2020, 39, e103637. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Jeanpierre, M.; Cognard, J.; Tusseau, M.; Riller, Q.; Bui, L.C.; Berthelet, J.; Laurent, A.; Crickx, E.; Parlato, M.; Stolzenberg, M.C.; et al. Haploinsufficiency in PTPN2 leads to early-onset systemic autoimmunity from Evans syndrome to lupus. J. Exp. Med. 2024, 221, e20232337. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Bae, J.H.; Park, D. Effect of dietary calcium on the gender-specific association between polymorphisms in the PTPRD locus and osteoporosis. Clin. Nutr. 2022, 41, 680–686. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Alonso, A.; Pulido, R. The extended human PTPome: A growing tyrosine phosphatase family. FEBS J. 2016, 283, 1404–1429. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Zhang, Y.; Shuai, X.; Lei, Y.; Ma, T.; Yuan, T.; Zhu, S.; Zhong, L. PTPN2: Advances and perspectives in cancer treatment potential and inhibitor research. Int. J. Biol. Macromol. 2025, 316, 144740. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Alonso, A.; Sasin, J.; Bottini, N.; Friedberg, I.; Friedberg, I.; Osterman, A.; Godzik, A.; Hunter, T.; Dixon, J.; Mustelin, T. Protein tyrosine phosphatases in the human genome. Cell 2004, 117, 699–711. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Yang, H.; Wang, L.; Shigley, C.; Yang, W. Protein tyrosine phosphatases in skeletal development and diseases. Bone Res. 2022, 10, 10. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Muise, A.; Rotin, D. Apical junction complex proteins and ulcerative colitis: A focus on the PTPRS gene. Expert Rev. Mol. Diagn. 2008, 8, 465–477. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Yip, S.C.; Saha, S.; Chernoff, J. PTP1B: A double agent in metabolism and oncogenesis. Trends Biochem. Sci. 2010, 35, 442–449. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Bessette, D.C.; Qiu, D.; Pallen, C.J. PRL PTPs: Mediators and markers of cancer progression. Cancer Metastasis Rev. 2008, 27, 231–252. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Bhavana; Kohal, R.; Kumari, P.; Das Gupta, G.; Kumar Verma, S. Druggable targets of protein tyrosine phosphatase Family, viz. PTP1B, SHP2, Cdc25, and LMW-PTP: Current scenario on medicinal Attributes, and SAR insights. Bioorg. Chem. 2024, 144, 107121. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Roychoudhury, K.; Hegde, R.S. The Eyes Absent Proteins: Unusual HAD Family Tyrosine Phosphatases. Int. J. Mol. Sci. 2021, 22, 3925. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Manguso, R.T.; Pope, H.W.; Zimmer, M.D.; Brown, F.D.; Yates, K.B.; Miller, B.C.; Collins, N.B.; Bi, K.; LaFleur, M.W.; Juneja, V.R.; et al. In vivo CRISPR screening identifies Ptpn2 as a cancer immunotherapy target. Nature 2017, 547, 413–418. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Liu, Y.; Han, L.; Zhu, P.; Song, M.; Zhang, Y.; Meng, L.; Zhang, W.; Zhang, C.; Zhong, M. PTPN2 targets TAK1 for dephosphorylation to improve cellular senescence and promote adipose tissue browning in T2DM. Front. Pharmacol. 2023, 14, 1124633. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Song, J.; Lan, J.; Tang, J.; Luo, N. PTPN2 in the Immunity and Tumor Immunotherapy: A Concise Review. Int. J. Mol. Sci. 2022, 23, 10025. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Tautz, L.; Critton, D.A.; Grotegut, S. Protein tyrosine phosphatases: Structure, function, and implication in human disease. Methods Mol. Biol. 2013, 1053, 179–221. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Hamel-Côté, G.; Lapointe, F.; Véronneau, S.; Mayhue, M.; Rola-Pleszczynski, M.; Stankova, J. Regulation of platelet-activating factor-mediated interleukin-6 promoter activation by the 48 kDa but not the 45 kDa isoform of protein tyrosine phosphatase non-receptor type 2. Cell Biosci. 2019, 9, 51. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Sree, N.K.; Anesh, R.; Radha, V. Dynamic changes in nuclear localization of a DNA-binding protein tyrosine phosphatase TCPTP in response to DNA damage and replication arrest. Cell Biol. Toxicol. 2012, 28, 409–419. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Lam, M.H.; Michell, B.J.; Fodero-Tavoletti, M.T.; Kemp, B.E.; Tonks, N.K.; Tiganis, T. Cellular stress regulates the nucleocytoplasmic distribution of the protein-tyrosine phosphatase TCPTP. J. Biol. Chem. 2001, 276, 37700–37707. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Bluestone, J.A.; Buckner, J.H.; Herold, K.C. Immunotherapy: Building a bridge to a cure for type 1 diabetes. Science 2021, 373, 510–516. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Ye, J.; Richardson, T.G.; McArdle, W.L.; Relton, C.L.; Gillespie, K.M.; Suderman, M.; Hemani, G. Identification of loci where DNA methylation potentially mediates genetic risk of type 1 diabetes. J. Autoimmun. 2018, 93, 66–75. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Op de Beeck, A.; Eizirik, D.L. Viral infections in type 1 diabetes mellitus—Why the β cells? Nat. Rev. Endocrinol. 2016, 12, 263–273. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Colli, M.L.; Moore, F.; Gurzov, E.N.; Ortis, F.; Eizirik, D.L. MDA5 and PTPN2, two candidate genes for type 1 diabetes, modify pancreatic beta-cell responses to the viral by-product double-stranded RNA. Hum. Mol. Genet. 2010, 19, 135–146. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Smith, M.J.; Rihanek, M.; Wasserfall, C.; Mathews, C.E.; Atkinson, M.A.; Gottlieb, P.A.; Cambier, J.C. Loss of B-Cell Anergy in Type 1 Diabetes Is Associated with High-Risk HLA and Non-HLA Disease Susceptibility Alleles. Diabetes 2018, 67, 697–703. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Todd, J.A.; Walker, N.M.; Cooper, J.D.; Smyth, D.J.; Downes, K.; Plagnol, V.; Bailey, R.; Nejentsev, S.; Field, S.F.; Payne, F.; et al. Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes. Nat. Genet. 2007, 39, 857–864. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Mallone, R.; Eizirik, D.L. Presumption of innocence for beta cells: Why are they vulnerable autoimmune targets in type 1 diabetes? Diabetologia 2020, 63, 1999–2006. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Wiede, F.; Shields, B.J.; Chew, S.H.; Kyparissoudis, K.; van Vliet, C.; Galic, S.; Tremblay, M.L.; Russell, S.M.; Godfrey, D.I.; Tiganis, T. T cell protein tyrosine phosphatase attenuates T cell signaling to maintain tolerance in mice. J. Clin. Investig. 2011, 121, 4758–4774. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Wiede, F.; Ziegler, A.; Zehn, D.; Tiganis, T. PTPN2 restrains CD8+ T cell responses after antigen cross-presentation for the maintenance of peripheral tolerance in mice. J. Autoimmun. 2014, 53, 105–114. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Rivada, A.R.; de Oliveira, J.G.; Martin-Vazquez Garcia, M.E.; de Brachene, A.C.; Yi, X.; Junior, J.C.; Zimath, P.; Van Goethem, F.; Pattou, F.; Kerr-Conte, J.; et al. The type 1 diabetes candidate genes PTPN2 and BACH2 regulate novel IFN-α-induced crosstalk between the JAK/STAT and MAPKs pathways in human beta cells. EBioMedicine 2025, 120, 105932. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Elvira, B.; Vandenbempt, V.; Bauzá-Martinez, J.; Crutzen, R.; Negueruela, J.; Ibrahim, H.; Winder, M.L.; Brahma, M.K.; Vekeriotaite, B.; Martens, P.J.; et al. PTPN2 Regulates the Interferon Signaling and Endoplasmic Reticulum Stress Response in Pancreatic β-Cells in Autoimmune Diabetes. Diabetes 2022, 71, 653–668. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Roca-Rivada, A.; Marín-Cañas, S.; Colli, M.L.; Vinci, C.; Sawatani, T.; Marselli, L.; Cnop, M.; Marchetti, P.; Eizirik, D.L. Inhibition of the type 1 diabetes candidate gene PTPN2 aggravates TNF-α-induced human beta cell dysfunction and death. Diabetologia 2023, 66, 1544–1556. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Kim, Y.K.; Kim, Y.R.; Wells, K.L.; Sarbaugh, D.; Guney, M.; Tsai, C.F.; Zee, T.; Karsenty, G.; Nakayasu, E.S.; Sussel, L. PTPN2 Regulates Metabolic Flux to Affect β-Cell Susceptibility to Inflammatory Stress. Diabetes 2024, 73, 434–447. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Triolo, T.M.; Matuschek, J.Q.; Castro-Gutierrez, R.; Shilleh, A.H.; Williams, S.P.M.; Hansen, M.S.; McDaniel, K.; Barra, J.M.; Michels, A.; Russ, H.A. Stem-Cell-Derived β-Like Cells with a Functional PTPN2 Knockout Display Increased Immunogenicity. Cells 2022, 11, 3845. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Howard, J.N.; Zaikos, T.D.; Levinger, C.; Rivera, E.; McMahon, E.K.; Holmberg, C.S.; Terao, J.; Sanz, M.; Copertino, D.C., Jr.; Wang, W.; et al. The HIV latency reversing agent HODHBt inhibits the phosphatases PTPN1 and PTPN2. JCI Insight 2024, 9, e179680. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Lu, X.; Xie, Q.; Pan, X.; Zhang, R.; Zhang, X.; Peng, G.; Zhang, Y.; Shen, S.; Tong, N. Type 2 diabetes mellitus in adults: Pathogenesis, prevention and therapy. Signal Transduct. Target. Ther. 2024, 9, 262. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Accili, D.; Deng, Z.; Liu, Q. Insulin resistance in type 2 diabetes mellitus. Nat. Rev. Endocrinol. 2025, 21, 413–426. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Klein, S.; Gastaldelli, A.; Yki-Järvinen, H.; Scherer, P.E. Why does obesity cause diabetes? Cell Metab. 2022, 34, 11–20. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Mastrototaro, L.; Roden, M. Insulin resistance and insulin sensitizing agents. Metabolism 2021, 125, 154892. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Lee, S.H.; Park, S.Y.; Choi, C.S. Insulin Resistance: From Mechanisms to Therapeutic Strategies. Diabetes Metab. J. 2022, 46, 15–37. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Dodd, G.T.; Lee-Young, R.S.; Brüning, J.C.; Tiganis, T. TCPTP Regulates Insulin Signaling in AgRP Neurons to Coordinate Glucose Metabolism with Feeding. Diabetes 2018, 67, 1246–1257. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Deem, J.D.; Faber, C.L.; Morton, G.J. AgRP neurons: Regulators of feeding, energy expenditure, and behavior. FEBS J. 2022, 289, 2362–2381. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Dodd, G.T.; Kim, S.J.; Méquinion, M.; Xirouchaki, C.E.; Brüning, J.C.; Andrews, Z.B.; Tiganis, T. Insulin signaling in AgRP neurons regulates meal size to limit glucose excursions and insulin resistance. Sci. Adv. 2021, 7, eabf4100. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Ono, H. Molecular Mechanisms of Hypothalamic Insulin Resistance. Int. J. Mol. Sci. 2019, 20, 1317. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Loh, K.; Fukushima, A.; Zhang, X.; Galic, S.; Briggs, D.; Enriori, P.J.; Simonds, S.; Wiede, F.; Reichenbach, A.; Hauser, C.; et al. Elevated Hypothalamic TCPTP in Obesity Contributes to Cellular Leptin Resistance. Cell Metab. 2022, 34, 1892. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Gurzov, E.N.; Tran, M.; Fernandez-Rojo, M.A.; Merry, T.L.; Zhang, X.; Xu, Y.; Fukushima, A.; Waters, M.J.; Watt, M.J.; Andrikopoulos, S.; et al. Hepatic oxidative stress promotes insulin-STAT-5 signaling and obesity by inactivating protein tyrosine phosphatase N2. Cell Metab. 2014, 20, 85–102. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Stanford, K.I.; Middelbeek, R.J.; Townsend, K.L.; An, D.; Nygaard, E.B.; Hitchcox, K.M.; Markan, K.R.; Nakano, K.; Hirshman, M.F.; Tseng, Y.H.; et al. Brown adipose tissue regulates glucose homeostasis and insulin sensitivity. J. Clin. Investig. 2013, 123, 215–223. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Loh, K.; Merry, T.L.; Galic, S.; Wu, B.J.; Watt, M.J.; Zhang, S.; Zhang, Z.Y.; Neel, B.G.; Tiganis, T. T cell protein tyrosine phosphatase (TCPTP) deficiency in muscle does not alter insulin signalling and glucose homeostasis in mice. Diabetologia 2012, 55, 468–478. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Sylow, L.; Tokarz, V.L.; Richter, E.A.; Klip, A. The many actions of insulin in skeletal muscle, the paramount tissue determining glycemia. Cell Metab. 2021, 33, 758–780. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Rohm, T.V.; Meier, D.T.; Olefsky, J.M.; Donath, M.Y. Inflammation in obesity, diabetes, and related disorders. Immunity 2022, 55, 31–55. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Stein, V.; Geserick, P.; Friedrich, K.; Brinschwitz, B.; Musal, I.M.; Ulke, J.; Fielitz, J.; Kappert, K. Pro-inflammatory cytokines as regulators of protein tyrosine phosphatases and insulin signaling in murine skeletal muscle cells. Cell. Signal. 2025, 135, 112037. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Fukushima, A.; Loh, K.; Galic, S.; Fam, B.; Shields, B.; Wiede, F.; Tremblay, M.L.; Watt, M.J.; Andrikopoulos, S.; Tiganis, T. T-cell protein tyrosine phosphatase attenuates STAT3 and insulin signaling in the liver to regulate gluconeogenesis. Diabetes 2010, 59, 1906–1914. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Keindl, M.; Fedotkina, O.; du Plessis, E.; Jain, R.; Bergum, B.; Mygind Jensen, T.; Laustrup Møller, C.; Falhammar, H.; Nyström, T.; Catrina, S.B.; et al. Increased Plasma Soluble Interleukin-2 Receptor Alpha Levels in Patients with Long-Term Type 1 Diabetes with Vascular Complications Associated with IL2RA and PTPN2 Gene Polymorphisms. Front. Endocrinol. 2020, 11, 575469. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Li, Y.; Zhou, H.; Li, Y.; Han, L.; Song, M.; Chen, F.; Shang, G.; Wang, D.; Wang, Z.; Zhang, W.; et al. PTPN2 improved renal injury and fibrosis by suppressing STAT-induced inflammation in early diabetic nephropathy. J. Cell Mol. Med. 2019, 23, 4179–4195. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Zhang, D.; Jiang, Y.; Song, D.; Zhu, Z.; Zhou, C.; Dai, L.; Xu, X. Tyrosine-protein phosphatase non-receptor type 2 inhibits alveolar bone resorption in diabetic periodontitis via dephosphorylating CSF1 receptor. J. Cell Mol. Med. 2019, 23, 6690–6699. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Li, L.; Fu, J.; Liu, D.; Sun, J.; Hou, Y.; Chen, C.; Shao, J.; Wang, L.; Wang, X.; Zhao, R.; et al. Hepatocyte-specific Nrf2 deficiency mitigates high-fat diet-induced hepatic steatosis: Involvement of reduced PPARγ expression. Redox Biol. 2020, 30, 101412. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Grohmann, M.; Wiede, F.; Dodd, G.T.; Gurzov, E.N.; Ooi, G.J.; Butt, T.; Rasmiena, A.A.; Kaur, S.; Gulati, T.; Goh, P.K.; et al. Obesity Drives STAT-1-Dependent NASH and STAT-3-Dependent HCC. Cell 2018, 175, 1289–1306.e1220. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Seemann, L.L.; Hanos, C.T.; Pujalte, G.G.A. Metabolic Bone Disease. Prim. Care 2024, 51, 445–454. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Wang, Y.N.; Liu, S.; Jia, T.; Feng, Y.; Zhang, W.; Xu, X.; Zhang, D. T Cell Protein Tyrosine Phosphatase in Osteoimmunology. Front. Immunol. 2021, 12, 620333. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Simoncic, P.D.; Bourdeau, A.; Lee-Loy, A.; Rohrschneider, L.R.; Tremblay, M.L.; Stanley, E.R.; McGlade, C.J. T-cell protein tyrosine phosphatase (Tcptp) is a negative regulator of colony-stimulating factor 1 signaling and macrophage differentiation. Mol. Cell Biol. 2006, 26, 4149–4160. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Spalinger, M.R.; Manzini, R.; Hering, L.; Riggs, J.B.; Gottier, C.; Lang, S.; Atrott, K.; Fettelschoss, A.; Olomski, F.; Kündig, T.M.; et al. PTPN2 Regulates Inflammasome Activation and Controls Onset of Intestinal Inflammation and Colon Cancer. Cell Rep. 2018, 22, 1835–1848. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Svensson, M.N.; Doody, K.M.; Schmiedel, B.J.; Bhattacharyya, S.; Panwar, B.; Wiede, F.; Yang, S.; Santelli, E.; Wu, D.J.; Sacchetti, C.; et al. Reduced expression of phosphatase PTPN2 promotes pathogenic conversion of Tregs in autoimmunity. J. Clin. Investig. 2019, 129, 1193–1210. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Yi, Z.; Lin, W.W.; Stunz, L.L.; Bishop, G.A. The adaptor TRAF3 restrains the lineage determination of thymic regulatory T cells by modulating signaling via the receptor for IL-2. Nat. Immunol. 2014, 15, 866–874. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Bourdeau, A.; Dubé, N.; Heinonen, K.M.; Théberge, J.F.; Doody, K.M.; Tremblay, M.L. TC-PTP-deficient bone marrow stromal cells fail to support normal B lymphopoiesis due to abnormal secretion of interferon-γ. Blood 2007, 109, 4220–4228. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Wiede, F.; Sacirbegovic, F.; Leong, Y.A.; Yu, D.; Tiganis, T. PTPN2-deficiency exacerbates T follicular helper cell and B cell responses and promotes the development of autoimmunity. J. Autoimmun. 2017, 76, 85–100. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Tang, M.; Tian, L.; Luo, G.; Yu, X. Interferon-Gamma-Mediated Osteoimmunology. Front. Immunol. 2018, 9, 1508. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Spalinger, M.R.; Sayoc-Becerra, A.; Santos, A.N.; Shawki, A.; Canale, V.; Krishnan, M.; Niechcial, A.; Obialo, N.; Scharl, M.; Li, J.; et al. PTPN2 Regulates Interactions Between Macrophages and Intestinal Epithelial Cells to Promote Intestinal Barrier Function. Gastroenterology 2020, 159, 1763–1777.e14. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Kleppe, M.; Lahortiga, I.; El Chaar, T.; De Keersmaecker, K.; Mentens, N.; Graux, C.; Van Roosbroeck, K.; Ferrando, A.A.; Langerak, A.W.; Meijerink, J.P.; et al. Deletion of the protein tyrosine phosphatase gene PTPN2 in T-cell acute lymphoblastic leukemia. Nat. Genet. 2010, 42, 530–535. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Kuang, W.; Wang, X.; Ding, J.; Li, J.; Ji, M.; Chen, W.; Wang, L.; Yang, P. PTPN2, A Key Predictor of Prognosis for Pancreatic Adenocarcinoma, Significantly Regulates Cell Cycles, Apoptosis, and Metastasis. Front. Immunol. 2022, 13, 805311. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Burton, P.R.; Clayton, D.G.; Cardon, L.R.; Craddock, N.; Deloukas, P.; Duncanson, A.; Kwiatkowski, D.P.; McCarthy, M.I.; Ouwehand, W.H.; Samani, N.J.; et al. Genome-wide association study of 14,000 cases of seven common diseases and 3000 shared controls. Nature 2007, 447, 661–678. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Baumgartner, C.K.; Ebrahimi-Nik, H.; Iracheta-Vellve, A.; Hamel, K.M.; Olander, K.E.; Davis, T.G.R.; McGuire, K.A.; Halvorsen, G.T.; Avila, O.I.; Patel, C.H.; et al. The PTPN2/PTPN1 inhibitor ABBV-CLS-484 unleashes potent anti-tumour immunity. Nature 2023, 622, 850–862. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Liang, S.; Tran, E.; Du, X.; Dong, J.; Sudholz, H.; Chen, H.; Qu, Z.; Huntington, N.D.; Babon, J.J.; Kershaw, N.J.; et al. A small molecule inhibitor of PTP1B and PTPN2 enhances T cell anti-tumor immunity. Nat. Commun. 2023, 14, 4524. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Chen, M.; Sun, J.P.; Liu, J.; Yu, X. Research progress of several protein tyrosine phosphatases in diabetes. Acta Physiol. Sin. 2010, 62, 179–189. [Google Scholar]
- Ahn, D.; Kwon, J.; Song, S.; Lee, J.; Yoon, S.; Chung, S.J. Methyl Syringate Stimulates Glucose Uptake by Inhibiting Protein Tyrosine Phosphatases Relevant to Insulin Resistance. Life 2023, 13, 1372. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Chang, R.C.; Lasalle, C.; Wang, Y.; Markovics, A.; Amber, K.T.; Mansini, A.P. PTPN6/SHP-1 in autoimmune disease: Immune tolerance, regulatory mechanisms, and therapeutic targeting. Front. Immunol. 2026, 17, 1839744. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Lee, Y.H.; Yoon, S.Y.; Baek, J.; Kim, S.J.; Yu, J.S.; Kang, H.; Kang, K.S.; Chung, S.J.; Kim, K.H. Metabolite Profile of Cucurbitane-Type Triterpenoids of Bitter Melon (Fruit of Momordica charantia) and Their Inhibitory Activity against Protein Tyrosine Phosphatases Relevant to Insulin Resistance. J. Agric. Food Chem. 2021, 69, 1816–1830. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Tiganis, T.; Tonks, N.K. Mechanisms, functions and therapeutic targeting of protein tyrosine phosphatases. Nat. Rev. Mol. Cell Biol. 2026, 27, 129–152. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Liu, C.; Lu, H.; Wang, H.; Loo, A.; Zhang, X.; Yang, G.; Kowal, C.; Delach, S.; Wang, Y.; Goldoni, S.; et al. Combinations with Allosteric SHP2 Inhibitor TNO155 to Block Receptor Tyrosine Kinase Signaling. Clin. Cancer Res. 2021, 27, 342–354. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Chen, Y.N.; LaMarche, M.J.; Chan, H.M.; Fekkes, P.; Garcia-Fortanet, J.; Acker, M.G.; Antonakos, B.; Chen, C.H.; Chen, Z.; Cooke, V.G.; et al. Allosteric inhibition of SHP2 phosphatase inhibits cancers driven by receptor tyrosine kinases. Nature 2016, 535, 148–152. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Zhang, C.; Dong, G.; Wu, X.; Chen, J.; Wang, Y.; Gong, L.; Yang, X.; Shi, Y.; Gu, Z.; Gao, X.; et al. Dual Conjugation of Long- and Medium-Chain Fatty Acids to BimBH3 Peptide Yields Ultra Long-Acting Inhibitors of Intracellular PTPN1/2. J. Med. Chem. 2025, 68, 11174–11187. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Miao, J.; Dong, J.; Miao, Y.; Bai, Y.; Qu, Z.; Jassim, B.A.; Huang, B.; Nguyen, Q.; Ma, Y.; Murray, A.A.; et al. Discovery of a selective TC-PTP degrader for cancer immunotherapy. Chem. Sci. 2023, 14, 12606–12614. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Tonks, N.K. Redox redux: Revisiting PTPs and the control of cell signaling. Cell 2005, 121, 667–670. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Scharl, M.; McCole, D.F.; Weber, A.; Vavricka, S.R.; Frei, P.; Kellermeier, S.; Pesch, T.; Fried, M.; Rogler, G. Protein tyrosine phosphatase N2 regulates TNFα-induced signalling and cytokine secretion in human intestinal epithelial cells. Gut 2011, 60, 189–197. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Klein, S.L.; Flanagan, K.L. Sex differences in immune responses. Nat. Rev. Immunol. 2016, 16, 626–638. [Google Scholar] [CrossRef] [Scilit] [PubMed]
- Tramunt, B.; Smati, S.; Grandgeorge, N.; Lenfant, F.; Arnal, J.F.; Montagner, A.; Gourdy, P. Sex differences in metabolic regulation and diabetes susceptibility. Diabetologia 2020, 63, 453–461. [Google Scholar] [CrossRef] [Scilit] [PubMed]




| PTPN2 Isoform | Domain Architecture | Subcellular Localization |
| 48 kDa Isoform (PTPN2-TC48) | ![]() | Endoplasmic Reticulum (ER) Retention: Characterized by a C-terminal hydrophobic tail that masks the bipartite nuclear localization signal (NLS). This structural feature anchors the protein to the ER membrane, restricting it to the reticular network [17]. |
| 45 kDa Isoform (PTPN2-TC45) | ![]() | Nuclear Localization & Cytoplasmic Shuttling: Lacks the hydrophobic tail, exposing the C-terminal NLS which drives predominant nuclear entry. Under specific cellular stress conditions (e.g., EGFR activation), it passively translocates into the cytoplasm to execute substrate dephosphorylation [7]. |
| Cell Type | Osteoimmunological Impact | Molecular Mechanism |
|---|---|---|
| Macrophages | Inhibits activation and bone resorption: Suppresses osteoclast precursor differentiation and limits M1 macrophage polarization and pro-inflammatory cytokine production. | Polarization Regulation: Limits macrophage responsiveness to LPS and IFN-γ to maintain M1/M2 balance and suppress M1-driven bone resorption [60]. |
| CSF-1/CSF-1R Axis: Dephosphorylates CSF-1R (Y807) and ERK to suppress CSF-1-induced osteoclast precursor differentiation [56,61]. | ||
| Inflammasome Modulation: Dephosphorylates JNK to block NLRP3 inflammasome assembly and IL-1β release, thereby attenuating inflammatory bone resorption [62]. | ||
| T cells | Preserves skeletal homeostasis: Stabilizes Treg function and restricts pathogenic Th1/Th17 expansion. | Foxp3 Stability: Dephosphorylates STAT3 to prevent IL-6-driven Foxp3 loss, maintaining the suppressive Treg phenotype [63]. |
| Differentiation Kinetics: Dephosphorylates JAK1, JAK3, and STAT5 to negatively regulate IL-2 signaling and tune Treg expansion [64]. | ||
| TCR Activation Control: Inhibits TCR signaling and Lck hyperphosphorylation to suppress inflammatory responses [29]. | ||
| B cells | Regulates lymphopoiesis and OPG/RANKL balance: Ensures normal B cell development and prevents pathological osteoclastogenesis. | Pro-Maturation Support: Inhibits IFN-γ/STAT1 signaling to promote maturation from pre-B to immature B cells [65]. |
| Anti-Proliferative Control: Suppresses IL-21/STAT3 signaling to limit excessive B cell proliferation [66]. |
| Inhibitor/Intervention Strategy | Target and Molecular Mechanism | Selectivity and Structural Basis | Pharmacokinetics and In Vivo Distribution | Major Clinical limitations and Safety Concerns |
|---|---|---|---|---|
| ABBV-CLS-484 [72] | Orthosteric dual PTPN1/PTPN2 inhibitor | High-affinity inhibitor targeting the highly conserved catalytic pocket | Favorable in vivo exposure profile; enables systemic PTPN1/PTPN2 inhibition | Potential risk of systemic autoimmunity; long-term safety and suitability for chronic metabolic indications remain to be established |
| D6 (lipidated peptide) [81] | Dual PTPN1/PTPN2 lipidated peptide inhibitor | Conjugation with medium- and long-chain fatty acids enhances cellular permeability | Prolonged in vivo half-life; shows clear liver enrichment tendency in animal models | Potential peptide stability and long-term safety concerns require further validation |
| TP1L (PROTAC) [82] | Selective PTPN2 degrader based on E3 ligase recruitment | Achieves high functional selectivity through targeted protein degradation | Large PROTAC molecular size; cellular permeability and in vivo distribution require further optimization | Large molecular weight; drug-like properties and in vivo delivery require further optimization |
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© 2026 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license.
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Yuan, Y.; Xie, J.; Wang, M.; Li, Y.; Zhang, X.; Bo, Z.; Sun, L.; Xu, A. Molecular Mechanisms and Targeted Therapies of PTPN2 in Metabolic Diseases: A Review. Biomolecules 2026, 16, 1016. https://doi.org/10.3390/biom16071016
Yuan Y, Xie J, Wang M, Li Y, Zhang X, Bo Z, Sun L, Xu A. Molecular Mechanisms and Targeted Therapies of PTPN2 in Metabolic Diseases: A Review. Biomolecules. 2026; 16(7):1016. https://doi.org/10.3390/biom16071016
Chicago/Turabian StyleYuan, Yue, Jing Xie, Mo Wang, Yishan Li, Xinxin Zhang, Zunjie Bo, Lei Sun, and Ajing Xu. 2026. "Molecular Mechanisms and Targeted Therapies of PTPN2 in Metabolic Diseases: A Review" Biomolecules 16, no. 7: 1016. https://doi.org/10.3390/biom16071016
APA StyleYuan, Y., Xie, J., Wang, M., Li, Y., Zhang, X., Bo, Z., Sun, L., & Xu, A. (2026). Molecular Mechanisms and Targeted Therapies of PTPN2 in Metabolic Diseases: A Review. Biomolecules, 16(7), 1016. https://doi.org/10.3390/biom16071016



