Clinically Significant Carbapenemases in Gram-Negative Pathogens: Molecular Diversity and Advances in β-Lactamase Inhibitor Therapy
Abstract
1. Introduction
2. Materials and Methods
3. Classification and Genetic Diversity of Carbapenemases
3.1. Class A Serine Carbapenemases
3.1.1. SME and IMI/Nmc-A
3.1.2. KPC
3.2. Class B Metallo-β-Lactamases with Carbapenem-Hydrolyzing Activity
3.2.1. IMP
3.2.2. NDM
3.2.3. VIM
3.3. Carbapenem-Hydrolyzing Class D Serine β-Lactamases (Selected OXA Families)
4. Next-Generation β-Lactam/β-Lactamase Inhibitor Combinations
4.1. Ceftazidime-Avibactam (CAZ-AVI)
4.2. Meropenem-Vaborbactam (MER-VAB)
4.3. Imipenem-Cilastatin-Relebactam (IMI-REL)
4.4. Sulbactam-Durlobactam (SUL-DUR)
4.5. Cefepime-Enmetazobactam (CFP-ENM)
4.6. Aztreonam-Avibactam (ATM-AVI)
4.7. Investigational BL/BLI Combinations in Clinical Development
5. Comparative Inhibitor Spectra: Key Gaps in Coverage
6. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| ABC | Acinetobacter baumannii-calcoaceticus complex |
| AI | Artificial intelligence |
| AP | Acute pyelonephritis |
| ATM | Aztreonam |
| ATM-AVI | Aztreonam-Avibactam |
| AVI | Avibactam |
| BAT | Best available therapy |
| BL/BLI | β-lactam/β-lactamase inhibitor |
| BLI | β-lactamase inhibitor |
| BPPL | Bacterial Priority Pathogens List |
| BSI | Bloodstream infection |
| C | Chromosomal |
| CARB | Carbapenem |
| CAZ | Ceftazidime |
| CAZ-AVI | Ceftazidime-Avibactam |
| CDC | Centers for Disease Control and Prevention |
| CEP | Cephalosporins |
| CFP | Cefepime |
| CFP-ENM | Cefepime-Enmetazobactam |
| CI | Confidence interval |
| cIAI | Complicated intra-abdominal infection |
| CLAV | Clavulanate |
| CP | Carbapenemase-producing |
| CRAB | Carbapenem-resistant Acinetobacter baumannii |
| CRE | Carbapenem-resistant Enterobacterales |
| CR-GNB | Carbapenem-resistant Gram-negative bacteria |
| CRKP | Carbapenem-resistant Klebsiella pneumoniae |
| CRPA | Carbapenem-resistant Pseudomonas aeruginosa |
| cUTI | Complicated urinary tract infection |
| DBO | Diazabicyclooctane |
| DHP-I | Dehydropeptidase-I inhibitor |
| DUR | Durlobactam |
| EDTA | Ethylenediaminetetraacetic acid |
| EMA | European Medicines Agency |
| ENM | Enmetazobactam |
| ESBL | Extended-spectrum β-lactamase |
| ETP | Ertapenem |
| FDA | Food and Drug Administration |
| HABP | Hospital-acquired bacterial pneumonia |
| ICU | Intensive care unit |
| IMI | Imipenem |
| IMI/Nmc-A | Imipenemase/non-metallo-carbapenemase A |
| IMI-REL | Imipenem-Cilastatin-Relebactam |
| IMP | Imipenemase metallo-β-lactamase |
| IS | Insertion sequence |
| KPC | Klebsiella pneumoniae carbapenemase |
| MBL | Metallo-β-lactamase |
| MDR | Multidrug-resistant |
| MER | Meropenem |
| MER-VAB | Meropenem-Vaborbactam |
| MET | Metronidazole |
| MIC | Minimum inhibitory concentration |
| MRSA | Methicillin-resistant Staphylococcus aureus |
| NAC | Nacubactam |
| NCBI | National Center for Biotechnology Information |
| NDM | New Delhi metallo-β-lactamase |
| OR | Odds ratio |
| OX | Oxacillin |
| OXA | Oxacillinase |
| P | Plasmid |
| PBP2/3 | Penicillin-binding protein 2/3 |
| PCN | Penicillin |
| REL | Relebactam |
| RR | Relative risk |
| SME | Serratia marcescens enzyme |
| SUL | Sulbactam |
| SUL-DUR | Sulbactam-Durlobactam |
| TAN | Taniborbactam |
| TAZO | Tazobactam |
| TOC | Test of cure |
| VAB | Vaborbactam |
| VABP | Ventilator-associated bacterial pneumonia |
| VIM | Verona integron-encoded metallo-β-lactamase |
| XDR | Extensively drug-resistant |
| XER | Xeruborbactam |
| ZID | Zidebactam |
| WHO | World Health Organization |
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| Ambler Class (Catalytic Center) | Carbapenemase Family | Substrate Profile | Inhibitors | Predominant Host Species | Variants | References |
|---|---|---|---|---|---|---|
| A * (Serine) | SME | PCNs, CEPs (not extended-spectrum), CARBs, ATM (weak activity) | CLAV, TAZO, AVI; variable inhibition by newer BLIs (limited data) | Serratia marcescens (almost exclusively) | SME-1–5; SME- 6 (Serratia ureilytica) | [41,42,43,44,45] |
| IMI/Nmc-A | PCNs, CEPs (not extended-spectrum), CARBs | CLAV, AVI | Enterobacter cloacae complex | IMI-1–IMI-24, Nmc-A | [41,42,43] | |
| KPC | PCNs, CEPs, CARBs, ATM | AVI, VAB, REL; variable inhibition in vitro by classical BLIs (e.g., CLAV, TAZO, SUL), insufficient to restore clinical susceptibility | Klebsiella pneumoniae (primary host), Escherichia coli, & other Enterobacterales | 290 total; KPC-2 & KPC-3 most prevalent globally | [46,47,48,49] | |
| B1 ** (Zn1, Zn2) | IMP | Broad β-lactam hydrolysis including CARBs; no activity against ATM | EDTA & other metal chelators | Enterobacterales, Pseudomonas aeruginosa | 107 total; IMP-1 (Japan) & IMP-4 (Australia) common | [50,51,52,53] |
| NDM | Broad β-lactam hydrolysis including CARBs; no activity against ATM | EDTA & other metal chelators | K. pneumoniae, E. coli; Acinetobacter & Pseudomonas spp. | 96 total; NDM-1, NDM-4, NDM-5, NDM-7 most common | [36,42,54,55] | |
| VIM | Broad β-lactam hydrolysis including CARBs; no activity against ATM | EDTA & other metal chelators | P. aeruginosa, Enterobacterales (particularly K. pneumoniae, E. coli, Enterobacter spp.) | 94 total; VIM-1 & VIM-2 most frequently identified | [36,56,57,58] | |
| D # (Serine) | OXA-23 | OX, PCNs, CARBs (weak activity); kinetic variation across families | Poor inhibition by CLAV, SUL, TAZO & EDTA; AVI (variable activity) & often limited against many OXA types | Acinetobacter baumannii | 55 total; OXA-23 dominant | [59,60,61,62,63] |
| OXA-24/40 | OX, PCNs, CARBs (weak activity) | Poor inhibition by CLAV, SUL, TAZO & EDTA; AVI (variable activity) | A. baumannii | 15 total; OXA-24/40 & OXA-72 prevalent | [59,64] | |
| OXA-51 | OX, PCNs, CARBs (weak activity) | Poor inhibition by CLAV, SUL, TAZO & EDTA; AVI (variable activity) | A. baumannii | 398 total; OXA-66, OXA-65, & OXA-69 dominant | [59,65,66] | |
| OXA-58 | OX, PCNs, CARBs (weak activity) | Poor inhibition by CLAV, SUL, TAZO & EDTA; AVI (variable activity) | A. baumannii | 8 total; OXA-58 most widely reported; OXA-96 | [59,67] | |
| OXA-48 | OX, PCNs, CARBs (weak activity) | AVI | K. pneumoniae, E. coli, E. cloacae complex | 23 total; OXA-48, OXA-181, OXA-232 & OXA-244 clinically relevant | [59,68,69,70] |
| Drug Name | Novel BLI Structure | US FDA Status or Clinical Phase * (as of February 2026) | Mechanism of Action | Approved or Investigated Indications | Key Enzyme & Bacterial Targets | Limitations in Coverage Spectrum | Key Sources |
|---|---|---|---|---|---|---|---|
| Ceftazidime-Avibactam (Avycaz®) | ![]() | Approved February 2015; expanded approval February 2018 | 3rd-generation cephalosporin (CAZ) & non-β-lactam/DBO BLI (AVI) | cUTI & cIAI (in combination w/MET) [initial approval]; HABP & VABP (expanded approval) | KPC, ESBL, AmpC, OXA-48 Enterobacterales, CR Pseudomonas aeruginosa strains | No activity against MBLs (NDM, VIM, IMP); low barrier to resistance, often treatment-selected | [198,199,200,201,202,203] |
| Meropenem-Vaborbactam (Vabomere®) | ![]() | Approved August 2017 | Carbapenem (MER) & non-β-lactam/cyclic boronic acid BLI (VAB) | cUTIs including AP in adults | KPC, other class A serine BLs Enterobacterales | No activity against class D (OXA) and MBL producers; limited non-fermenter coverage (Pseudomonas & Acinetobacter spp.) | [198,204,205,206,207,208] |
| Imipenem/Cilastatin/Relebactam (Recarbrio®) | ![]() | Approved July 2019 & June 2020 | Carbapenem (IMI), renal DHP-I inhibitor (Cilastin) & DBO BLI (REL) | cUTIs, cIAIs, HABP, and VABP | Class A serine BLs (ESBL, KPC) and Class C (AmpC) KPC-positive Enterobacterales, some CR P. aeruginosa | No activity against MBL (NDM, VIM, IMP) producers; limited/no activity against OXA-48-like CRE; emerging resistance due to porin loss, KPC allele mutations, and/or increased blaKPC copy number | [198,209,210,211,212,213,214] |
| Sulbactam-Durlobactam (Xacduro®) | ![]() | Approved May 2023 | Non-β-lactam/β-lactamase inhibitor (SUL) & non-β-lactam/DBO BLI (DUR) | HABP & VABP caused by susceptible isolates of Acinetobacter baumannii-calcoaceticus complex in adults | Acinetobacter baumannii and other ABC species, including CR, MDR & XDR; limited activity against CR-GNBs | Durlobactam does not inhibit class B MBLs; not broadly active against Enterobacterales or Pseudomonas aeruginosa carbapenemases | [215,216,217,218,219] |
| Cefepime-Enmetazobactam (Exblifep®) | ![]() | Approved February 2024 (US FDA) & March 2024 (EMA) | 4th-generation cephalosporin (CFP) & non-β-lactam/penicillanic acid sulfone BLI (ENM); both agents are zwitterionic | cUTIs, including AP (FDA approval) cUTIs (+ AP), HABP/ VABP, & BSI (EMA approval) | CTX-M, TEM, & SHV ESBLs; other class A β-lactamases; some KPCs (not reliably susceptible) & OXA-48 (in vitro data only) ESBL-producing Enterobacterales | ENM has no inhibitory activity against class B MBLs; no additional coverage for P. aeruginosa and A. baumannii over CEF; spectrum gaps also include MRSA, enterococci & anaerobes | [220,221,222,223,224,225] |
| Aztreonam-Avibactam (Emblaveo™) | ![]() | Approved February 2025 | Monobactam (ATM) & non-β-lactam/DBO BLI (AVI) | Combined w/MET for cIAIs in adults w/limited or no alternative treatment options. cIAI, HABP, VABP & cUTI (EMA only, April 2024) | Class A (ESBL, KPC), Class B MBLs (inhibitory activity due to ATM partner), Class C (AmpC), & Class D (OXA-48-like) CRE (high in vitro activity); S. maltophilia; P. aeruginosa (less potent activity) | Limited Acinetobacter, Gram-positive & anaerobe coverage; emerging resistance, especially among E. coli isolates, due to PBP3 modifications | [197,201,226,227,228,229,230,231] |
| Cefepime-Taniborbactam (VNRX-5133) | ![]() | Phase 3 (CERTAIN-1) completed 14 December 2021 | 4th-generation cephalosporin (CFP) & bicyclic boronic acid BLI (TAN) | cUTI + AP trial (adults) vs. comparator drug MER (NCT03840148 **) | Class A (ESBL, KPC), Class B (VIM, NDM), Class C (AmpC), Class D (OXA-48-like) Enterobacterales (CR, MDR) & P. aeruginosa (CR, MDR) | Not currently approved; IMP MBLs not inhibited by TAN; limited activity against Acinetobacter, Gram-positives, anaerobes; emergence of resistant variants NDM-9, NDM-30, & VIM-83 | [232,233,234,235,236,237,238] |
| Cefepime-Zidebactam (WCK 5222) | ![]() | Phase 3 completed 25 November 2024 | 4th-generation cephalosporin (CFP) & DBO BLI with PBP2 binding (ZID) | cUTI + AP trial (adults) vs. comparator MER (NCT04979806) | ESBL, KPC, MBLs (IMP, VIM, NDM), AmpC, OXA-48 MDR Enterobacterales, P. aeruginosa including CR | Clinical results pending; limited activity against Acinetobacter spp.; reported treatment-emergent resistance in P. aeruginosa | [239,240,241,242,243,244] |
| Aztreonam-Nacubactam (OP0595/RG6080) | ![]() | Phase 3 completed 26 November 2024 Phase 3 completed 1 September 2025 | Monobactam (ATM) & DBO BLI with PBP2 binding activity and enhancer effect (NAC) | cUTI + AP trial (adults) vs. Cefepime-nacubactam & MER (NCT05887908) CRE infections trial (adults) vs. Cefepime-nacubactam & BAT (NCT05905055) | MBLs (NDM, IMP), serine β-lactamases CRE, S. maltophilia | No regulatory approvals as of February 2026 | [245,246,247,248,249] |
| Cefepime-Nacubactam (OP0595/RG6080) | ![]() | Phase 3 completed 26 November 2024 Phase 3 completed 1 September 2025 | 4th-generation cephalosporin (CFP) & DBO BLI with PBP2 binding activity and enhancer effect (NAC) | cUTI + AP trial (adults) vs. Aztreonam-nacubactam & MER (NCT05887908) CRE infections trial (adults) vs. Aztreonam-nacubactam & BAT (NCT05905055) | KPC, OXA, MBLs, ESBL, AmpC CRE, Enterobacterales, P. aeruginosa, S. maltophilia | No regulatory approvals as of February 2026 | [245,247,248,249] |
| Imipenem-Cilastatin-Funobactam (XNW4107) | ![]() | Phase 3, status unknown, estimated completion December 2025 | Carbapenem (IMI), renal DHP-I inhibitor (Cilastin) & DBO BLI that potentiates IMI (funobactam) | cUTI + AP trial (adults) vs. MER (NCT05204368) | KPC, some MBLs, OXA, ESBL CRE, MDR Enterobacterales, MDR P. aeruginosa | Clinical results pending; incomplete MBL coverage; limited activity against Acinetobacter | [250,251,252,253] |
| Meropenem-Nacubactam (OP0595/RG6080) | ![]() | Phase 1 completed 10 August 2017 | Carbapenem (MER) & DBO BLI with PBP2 binding activity and enhancer effect (NAC) | Non-randomized, open-label trial; intrapulmonary lung penetration of NAC in healthy adults (NCT03182504); GNB infections | ESBL, KPC, class B NDM, AmpC, OXA-48 MDR Enterobacterales | Early clinical development; safety/efficacy not established | [245,248,254,255] |
| Meropenem-KSP-1007 | ![]() | Phase 1 completed 1 October 2022 | Carbapenem (MER) & bicyclic boronic acid BLI (KSP-1007) | First-in-human, randomized, double-blind clinical trial (NCT05226923) to treat CR-GNB infections | Broad inhibition of Ambler class A, B, C & D enzymes: KPC, MBLs (NDM, VIM, IMP, except IMP-6), AmpC, & OXAs (including OXA-48, Acinetobacter OXAs) CRE, A. baumannii (plus OXA producers) & P. aeruginosa (2-fold MER MIC reductions observed) | Early clinical development; safety/efficacy not established | [256] |
| Ertapenem-Zidebactam (WCK 5222) | ![]() | Phase 1 completed 3 November 2023 | Carbapenem (ETP) & DBO BLI with PBP2 binding (ZID) | Single-center trial (NCT05645757); bacterial infections | E. coli w/AmpC, ESBLs, KPC, MBLs, or OXA-48 (>90% inhibited) | Early clinical development; safety & PK studied but efficacy not established | [257] |
| Xeruborbactam (QPX7728) Combinations | ![]() | Phase 1 trials in combination w/Ceftibuten (NCT06079775 completed 5 January 2025) & Cefiderocol (NCT06547554 completed 27 October 2025) | Oral dosage of 3rd-generation cephalosporin (ceftibuten) & bicyclic boronic acid BLI (XER) Siderophore cephalosporin (CFD) & bicyclic boronic acid BLI (XER) | Both Phase 1 trials studied the safety, tolerability, & PK | Potential Pan-BLI (ultrabroad spectrum); inhibits KPC, MBLs (NDM, VIM, IMP), class D OXA enzymes (e.g., OXA-48 in Enterobacterales and OXA-23/OXA-40 in A. baumannii) as well as other class A and class C β-lactamases | Early clinical development; safety & PK studied but efficacy not established; reported XER-resistant IMP variants (IMP-6, IMP-10, IMP-14, IMP-26) | [258,259,260,261,262] |
| Meropenem-ANT3310 | ![]() | Phase 1 completed 19 August 2025 | Carbapenem (MER) & DBO serine-BLI (ANT3310) | Open-label, single-center trial to determine MER-ANT3310 penetration into the lung in healthy adults (NCT06916156) | KPC & OXA (including OXA-23, OXA-24/40, OXA-51, OXA-58); potentiates activity of MER against CR A. baumannii and Enterobacterales | Early clinical development; safety/efficacy not established | [263,264,265] |
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Grossman, J.M.; Thompson, D.K. Clinically Significant Carbapenemases in Gram-Negative Pathogens: Molecular Diversity and Advances in β-Lactamase Inhibitor Therapy. Antibiotics 2026, 15, 413. https://doi.org/10.3390/antibiotics15040413
Grossman JM, Thompson DK. Clinically Significant Carbapenemases in Gram-Negative Pathogens: Molecular Diversity and Advances in β-Lactamase Inhibitor Therapy. Antibiotics. 2026; 15(4):413. https://doi.org/10.3390/antibiotics15040413
Chicago/Turabian StyleGrossman, Jessi M., and Dorothea K. Thompson. 2026. "Clinically Significant Carbapenemases in Gram-Negative Pathogens: Molecular Diversity and Advances in β-Lactamase Inhibitor Therapy" Antibiotics 15, no. 4: 413. https://doi.org/10.3390/antibiotics15040413
APA StyleGrossman, J. M., & Thompson, D. K. (2026). Clinically Significant Carbapenemases in Gram-Negative Pathogens: Molecular Diversity and Advances in β-Lactamase Inhibitor Therapy. Antibiotics, 15(4), 413. https://doi.org/10.3390/antibiotics15040413
















