Author Contributions
Conceptualization, D.T.L. and G.C.F.; methodology, D.T.L. and G.C.F.; formal analysis, D.T.L. and G.C.F.; investigation, D.T.L.; resources, G.C.F.; data curation, D.T.L.; writing—original draft preparation, D.T.L.; writing—review and editing, D.T.L. and G.C.F.; visualization, D.T.L.; supervision, G.C.F.; project administration, G.C.F.; funding acquisition, G.C.F. All authors have read and agreed to the published version of the manuscript.
Figure 1.
Location of the 444 small ruminant farms around Greece, which were visited to record details on the use of antibiotics.
Figure 1.
Location of the 444 small ruminant farms around Greece, which were visited to record details on the use of antibiotics.
Figure 2.
Education level of sheep (green) and goat (yellow) farmers in Greece, who calculated bodyweight for the administration of antibiotics by estimation (bars indicate 95% confidence intervals). (Correspondence of Education levels with the European Qualifications Framework Levels 1–8 are described in
Table S1.)
Figure 2.
Education level of sheep (green) and goat (yellow) farmers in Greece, who calculated bodyweight for the administration of antibiotics by estimation (bars indicate 95% confidence intervals). (Correspondence of Education levels with the European Qualifications Framework Levels 1–8 are described in
Table S1.)
Figure 3.
Schematic illustration of the sheep flocks (outer circle) and goat herds (inner circle) on which various antibiotics were administered in cases of clinical mastitis in Greece.
Figure 3.
Schematic illustration of the sheep flocks (outer circle) and goat herds (inner circle) on which various antibiotics were administered in cases of clinical mastitis in Greece.
Figure 4.
Numbers of antibiotics used on sheep (green) and goat (yellow) farms for the treatment of clinical mastitis in accordance with the professional involvement of farmers (full pattern: full-time farmers, motif pattern: part-time farmers) in Greece.
Figure 4.
Numbers of antibiotics used on sheep (green) and goat (yellow) farms for the treatment of clinical mastitis in accordance with the professional involvement of farmers (full pattern: full-time farmers, motif pattern: part-time farmers) in Greece.
Figure 5.
Schematic illustration of the sheep flocks (outer circle) and goat herds (inner circle) in which various antibiotics were administered in cases of abortion, as found in a countrywide investigation in Greece.
Figure 5.
Schematic illustration of the sheep flocks (outer circle) and goat herds (inner circle) in which various antibiotics were administered in cases of abortion, as found in a countrywide investigation in Greece.
Figure 6.
Proportion of small ruminant farms (n), on which various antibiotics were used during routine administration to newborn lambs (green)/kids (yellow) in Greece.
Figure 6.
Proportion of small ruminant farms (n), on which various antibiotics were used during routine administration to newborn lambs (green)/kids (yellow) in Greece.
Figure 7.
Incidence rate of pneumonia (dark shaded) or diarrhoea (light shaded) in lambs (green) or kids (yellow), in accordance with routine administration (motif pattern) or no administration (full pattern) of antibiotics in Greece.
Figure 7.
Incidence rate of pneumonia (dark shaded) or diarrhoea (light shaded) in lambs (green) or kids (yellow), in accordance with routine administration (motif pattern) or no administration (full pattern) of antibiotics in Greece.
Figure 8.
Schematic illustration of the sheep flocks (outer circle) and goat herds (inner circle) in which various antibiotics were administered in cases of pneumonia in lambs/kids, as found in a countrywide investigation in Greece.
Figure 8.
Schematic illustration of the sheep flocks (outer circle) and goat herds (inner circle) in which various antibiotics were administered in cases of pneumonia in lambs/kids, as found in a countrywide investigation in Greece.
Figure 9.
Schematic illustration of the sheep flocks (outer circle) and goat herds (inner circle) in which various antibiotics were administered in cases of diarrhoea in lambs/kids, as found in a countrywide investigation in Greece.
Figure 9.
Schematic illustration of the sheep flocks (outer circle) and goat herds (inner circle) in which various antibiotics were administered in cases of diarrhoea in lambs/kids, as found in a countrywide investigation in Greece.
Table 1.
General characteristics of usage of antibiotics on small ruminant farms in Greece.
Table 1.
General characteristics of usage of antibiotics on small ruminant farms in Greece.
| Sheep Flocks (n = 325) | Goat Herds (n = 119) | p |
---|
Method of calculation of bodyweight for the administration of antibiotics |
Estimation | 252 (77.5% (72.7–81.7%)) 1 | 93 (78.1% (68.9–84.6%)) | 0.96 |
Weighing | 73 (22.5% % (18.3–27.3%)) | 26 (21.9% (15.4–30.1%)) |
Administration of antibiotics to animals at the dose prescribed |
At the dose prescribed | 264 (81.2% (76.6–85.1%)) | 93 (78.1% (68.9–84.6%)) | 0.47 |
At higher dose than prescribed | 61 (18.8% (14.9–23.4%)) | 26 (21.9% (15.4–30.1%)) |
Observation of the withdrawal period after administration of antibiotics |
Yes | 321 (98.8% (96.9–99.5%)) | 117 (98.3% (94.1–99.5%)) | 0.72 |
No | 4 (1.2% (0.5–3.1%)) | 2 (1.7% (0.5–5.9%)) |
Table 2.
Multivariable analysis for variables associated with the general characteristics of usage of antibiotics on small ruminant farms in Greece.
Table 2.
Multivariable analysis for variables associated with the general characteristics of usage of antibiotics on small ruminant farms in Greece.
Variables | Odds Ratio 1 (95% Confidence Intervals) | p Value |
---|
Calculation of Bodyweight for the Administration of Antibiotics by Weighing |
Sheep flocks | |
Education of farmer | | 0.007 |
Primary (3/57 = 5.3% 2) | reference | - |
Secondary or post-secondary (58/225 = 25.8%) | 6.252 (1.882–20.764) | 0.003 |
Tertiary (12/43 = 27.9%) | 6.968 (1.824–26.611) | 0.005 |
Number of animals on the farms | | 0.020 |
≤165 ewes (13/88 = 14.8%) | reference | - |
166–330 ewes (26/120 = 21.7%) | 1.596 (0.768–3.317) | 0.21 |
331–500 ewes (20/56 = 35.7%) | 3.205 (1.435–7.158) | 0.005 |
>500 ewes (14/51 = 27.5%) | 2.183 (0.932–5.115) | 0.07 |
Goat herds | |
Education of farmer | | 0.018 |
Primary (0/20 = 0.0%) | reference | - |
Secondary or post-secondary (23/89 = 25.8%) | 14.489 (0.843–249.133) | 0.07 |
Tertiary (3/10 = 30.0%) | 19.133 (0.880–415.906) | 0.06 |
Administration of Antibiotics to Animals at the Dose Prescribed |
Sheep flocks | |
Number of animals on the farms | | 0.029 |
≤165 ewes (79/88 = 89.8%) | 2.701 (1.049–6.953) | 0.039 |
166–330 ewes (96/120 = 80.0%) | 1.231 (0.561–2.703) | 0.60 |
331–500 ewes (50/56 = 89.3%) | 2.564 (0.883–7.443) | 0.08 |
>500 ewes (39/51 = 76.5%) | reference | - |
Observation of the Withdrawal Period |
Sheep flocks | |
Education of farmer | | 0.030 |
Primary (56/57 = 98.2%) | 2.732 (0.240–31.156) | 0.42 |
Secondary or post-secondary (224/225 = 99.6%) | 10.927 (0.968–123.310) | 0.05 |
Tertiary (41/43 = 95.3%) | reference | - |
Table 3.
Numbers of small ruminant farms (n) on which various antibiotics were administered for the treatment of clinical mastitis in Greece.
Table 3.
Numbers of small ruminant farms (n) on which various antibiotics were administered for the treatment of clinical mastitis in Greece.
Antibiotic | Sheep Flocks (n = 270) | Goat Herds (n = 71) |
---|
Amoxicillin | 11 (4.1%) 1 | 3 (4.2%) |
Ampicillin | 1 (0.4%) | 1 (1.4%) |
Cephalosporins | 10 (3.7%) | 1 (1.4%) |
Cloxacillin | 4 (1.5%) | 3 (4.2%) |
Enrofloxacin | 7 (2.6%) | 3 (4.2%) |
Florfenicol | 2 (0.7%) | 0 (0.0%) |
Gentamicin | 4 (1.5%) | 0 (0.0%) |
Lincomycin | 7 (2.6%) | 3 (4.2%) |
Marbofloxacin | 6 (2.2%) | 0 (0.0%) |
Oxytetracycline | 60 (22.2%) | 20 (2.8%) |
Penicillin | 218 (80.7%) | 53 (74.6%) |
Spectinomycin | 4 (1.5%) | 2 (2.8%) |
Streptomycin | 200 (74.1%) | 50 (70.4%) |
Tylosin | 11 (4.1%) | 4 (5.6%) |
Table 4.
Numbers of antibiotics used on small ruminant farms for the treatment of clinical mastitis in accordance with the pharmaceutical form used on the farms for administration of antibiotics in Greece.
Table 4.
Numbers of antibiotics used on small ruminant farms for the treatment of clinical mastitis in accordance with the pharmaceutical form used on the farms for administration of antibiotics in Greece.
Pharmaceutical Form Used on the Farms for Administration of Antibiotics | Sheep Flocks | Goat Herds |
---|
Injectable forms | 2.05 ± 0.04 | 2.13 ± 0.09 |
Forms for intramammary administration | 1.42 ± 0.12 | 1.50 ± 0.19 |
Injectable forms and forms for intramammary administration | 2.73 ± 0.24 | n/a |
Table 5.
Association of the incidence rate of clinical mastitis with the administration of antibiotics on small ruminant farms in Greece.
Table 5.
Association of the incidence rate of clinical mastitis with the administration of antibiotics on small ruminant farms in Greece.
Incidence Rate of Mastitis | Sheep Flocks | Goat Herds |
---|
Administration of Antibiotics in Cases of Mastitis | No Administration of Antibiotics in Cases of Mastitis | Administration of Antibiotics in Cases of Mastitis | No Administration of Antibiotics in Cases of Mastitis |
---|
≤1.0% | 32 (94.1%) 1 | 2 (5.9%) | 5 (100.0%) | 0 |
>1.0% | 238 (100.0%) | 0 (0.0%) | 66 (100.0%) | 0 |
p | 0.0002 | n/a |
Table 6.
Multivariable analysis for associations with the number of antibiotics used on farms for the treatment of clinical mastitis in Greece.
Table 6.
Multivariable analysis for associations with the number of antibiotics used on farms for the treatment of clinical mastitis in Greece.
Variables | Odds Risk 1 (95% Confidence Intervals) | p Value |
---|
Sheep Flocks | |
Professional involvement of farmer | | 0.011 |
Full-time farmers (2.07 ± 0.05 2) | 2.638 (1.488–11.608) | 0.011 |
Part-time farmers (1.73 ± 0.12) | reference | - |
Goat Herds | |
Professional involvement of farmer | | 0.015 |
Full-time farmers (2.14 ± 0.09) | 2.400 (1.776–7.136) | 0.015 |
Part-time farmers (1.38 ± 0.26) | reference | - |
Table 7.
Numbers of small ruminant farms (n) on which various antibiotics were used in cases of abortion in Greece.
Table 7.
Numbers of small ruminant farms (n) on which various antibiotics were used in cases of abortion in Greece.
Antibiotic | Sheep Flocks (n = 68) | Goat Herds (n = 40) |
---|
Cephalosporins | 1 (1.5%) 1 | 1 (2.5%) |
Lincomycin | 1 (1.5%) | 1 (2.5%) |
Oxytetracycline | 61 (89.7%) | 37 (92.5%) |
Penicillin | 9 (13.2%) | 2 (5.0%) |
Streptomycin | 3 (4.4%) | 0 (0.0%) |
Tylosin | 1 (1.5%) | 0 (0.0%) |
Table 8.
Multivariable analysis for factors associated with the administration of antibiotics in cases in abortion in Greece.
Table 8.
Multivariable analysis for factors associated with the administration of antibiotics in cases in abortion in Greece.
Variables | Odds Ratio 1 (95% Confidence Intervals) | p Value |
---|
Sheep Flocks | |
Experience of the farmer | | 0.001 |
≤5 years (12/41 = 29.3% 2) | reference | - |
>5 years (56/113 = 49.6%) | 2.374 (1.102–5.114) | 0.027 |
Season of start of the lambing period | | 0.007 |
All year (3/9 = 33.3%) | 1.500 (0.1056–21.313) | 0.76 |
Autumn (44/75 = 58.7%) | 4.258 (0.423–42.872) | 0.22 |
Winter (20/66 = 30.3%) | 1.304 (0.128–13.317) | 0.82 |
Spring–Summer (1/4 = 25.0%) | reference | - |
Daily period spent by the farmer at the farm | | 0.010 |
≤8 hours (13/46 = 28.3%) | reference | - |
>8 hours (55/108 = 50.9%) | 2.634 (1.251–5.546) | 0.011 |
Age of farmer | | 0.012 |
≤50 years (51/98 = 52.0%) | 2.489 (1.244–4.983) | 0.010 |
>50 years (17/56= 30.4%) | reference | - |
Goat Herds | |
Age of farmer | | 0.05 |
≤50 years (29/37 = 78.4%) | 3.296 (1.033–10.514) | 0.44 |
>50 years (11/21 = 52.4%) | reference | - |
Table 9.
Numbers of small ruminant farms (n) on which various antibiotics were routinely administered to newborn lambs/kids in Greece.
Table 9.
Numbers of small ruminant farms (n) on which various antibiotics were routinely administered to newborn lambs/kids in Greece.
Antibiotic | Sheep Flocks (n = 65) | Goat Herds (n = 29) |
---|
Amoxicillin | 17 (26.2%) 1 | 10 (34.5%) |
Ampicillin | 1 (1.5%) | 2 (6.7%) |
Cephalosporins | 0 (0.0%) | 2 (6.7%) |
Cloxacillin | 1 (1.5%) | 0 (0.0%) |
Enrofloxacin | 5 (7.7%) | 3 (10.3%) |
Gamitromycin | 1 (1.5%) | 0 (0.0%) |
Gentamicin | 3 (4.6%) | 1 (3.4%) |
Lincomycin | 1 (1.5%) | 0 (0.0%) |
Oxytetracycline | 36 (55.4%) | 15 (51.7%) |
Penicillin | 12 (18.5%) | 6 (20.7%) |
Spectinomycin | 2 (3.1%) | 0 (0.0%) |
Streptomycin | 5 (7.7%) | 4 (13.8%) |
Sulfonamides | 0 (0.0%) | 1 (3.4%) |
Tulathromycin | 2 (3.1%) | 0 (0.0%) |
Tylosin | 1 (1.5%) | 0 (0.0%) |
Table 10.
Multivariable analysis for factors associated with the routine administration of antibiotics to newborn lambs in Greece.
Table 10.
Multivariable analysis for factors associated with the routine administration of antibiotics to newborn lambs in Greece.
Variables | Odds Ratio 1 (95% Confidence Intervals) | p Value |
---|
Education of farmers | | 0.047 |
Primary (21/57 = 36.8% 2) | 3.228 (1.710–6.278) | 0.0003 |
Secondary or post-secondary (34/225 = 15.1%) | reference | - |
Tertiary (10/43 = 23.3%) | 1.702 (0.768–3.774) | 0.19 |
Table 11.
Numbers of small ruminant farms (n) on which various antibiotics were administered for the treatment of pneumonia in lambs or kids in Greece.
Table 11.
Numbers of small ruminant farms (n) on which various antibiotics were administered for the treatment of pneumonia in lambs or kids in Greece.
Antibiotic | Sheep Flocks (n = 71) | Goat Herds (n = 17) |
---|
Amoxicillin | 2 (2.8%) 1 | 0 (0.0%) |
Ampicillin | 3 (4.2%) | 2 (11.8%) |
Cephalosporins | 3 (4.2%) | 0 (0.0%) |
Enrofloxacin | 7 (9.9%) | 2 (11.8%) |
Erythromycin | 1 (1.4%) | 0 (0.0%) |
Gentamicin | 1 (1.4%) | 0 (0.0%) |
Lincomycin | 2 (2.8%) | 0 (0.0%) |
Marbofloxacin | 1 (1.4%) | 1 (5.9%) |
Oxytetracycline | 40 (56.3%) | 7 (41.2%) |
Penicillin | 9 (12.7%) | 3 (17.6%) |
Spectinomycin | 2 (2.8%) | 0 (0.0%) |
Streptomycin | 3 (4.2%) | 1 (5.9%) |
Tilmicosin | 1 (1.4%) | 0 (0.0%) |
Tulathromycin | 12 (16.9%) | 5 (29.4%) |
Tylosin | 8 (11.3%) | 1 (5.9%) |
Table 12.
Multivariable analysis for factors associated with the administration of antibiotics in cases of pneumonia in lambs in sheep flocks in Greece.
Table 12.
Multivariable analysis for factors associated with the administration of antibiotics in cases of pneumonia in lambs in sheep flocks in Greece.
Variables | Odds Ratio 1 (95% Confidence Intervals) | p Value |
---|
Family farming tradition | | 0.043 |
Yes (59/81 = 72.8% 2) | reference | - |
No (12/12 = 100.0%) | 9.454 (0.537–166.415) | 0.12 |
Table 13.
Numbers of small ruminant farms (n), on which various antibiotics were administered for the treatment of diarrhoea in lambs or kids in Greece.
Table 13.
Numbers of small ruminant farms (n), on which various antibiotics were administered for the treatment of diarrhoea in lambs or kids in Greece.
Antibiotic | Sheep Flocks (Total n = 141) | Goat Herds (Total n = 54) |
---|
Amoxicillin | 35 (24.87%) | 13 (24.1%) |
Ampicillin | 4 (2.8%) | 0 (0.0%) |
Cephalosporins | 3 (2.1%) | 0 (0.0%) |
Cloxacillin | 2 (1.4%) | 0 (0.0%) |
Colistin | 1 (0.7%) | 1 (1.9%) |
Enrofloxacin | 15 (10.6%) | 0 (0.0%) |
Gentamicin | 12 (8.5%) | 6 (11.1%) |
Lincomycin | 4 (2.8%) | 2 (3.7%) |
Neomycin | 2 (1.4%) | 0 (0.0%) |
Oxytetracycline | 46 (32.6%) | 19 (35.2%) |
Penicillin | 25 (17.7%) | 11 (20.4%) |
Spectinomycin | 13 (9.2%) | 5 (9.3%) |
Streptomycin | 17 (12.1%) | 5 (9.3%) |
Sulfonamides | 6 (4.3%) | 4 (7.4%) |
Tylosin | 13 (9.2%) | 1 (1.9%) |
Table 14.
Multivariable analysis for factors associated with the administration of antibiotics in cases of diarrhoea in lambs in sheep flocks in Greece.
Table 14.
Multivariable analysis for factors associated with the administration of antibiotics in cases of diarrhoea in lambs in sheep flocks in Greece.
Variables | Odds Ratio 1 (95% Confidence Intervals) | p Value |
---|
Administration of antibiotics to animals at the dose prescribed | | 0.017 |
Yes (136/163 = 83.4% 2) | 2.470 (1.029–5.930) | 0.043 |
No (22/31 = 71.0%) | reference | - |
Routine administration of antibiotics to newborns | | 0.048 |
Yes (44/158 = 27.8%) | 3.088 (1.032–9.240) | 0.044 |
No (4/36 = 11.1%) | reference | - |
Table 15.
Summary of multivariable analyses for outcomes about usage of antibiotics on small ruminant farms in Greece.
Table 15.
Summary of multivariable analyses for outcomes about usage of antibiotics on small ruminant farms in Greece.
Outcome | Farm | Variable | p Value |
---|
Calculation of bodyweight for the administration of antibiotics by weighing | S 1 | Education of farmers | 0.007 |
Number of animals on the farms | 0.020 |
G 1 | Education of farmers | 0.018 |
Administration of antibiotics to animals at the dose prescribed | S | Number of animals on the farms | 0.029 |
G | - | >0.37 |
Observation of the withdrawal period | S | Education of farmer | 0.030 |
G | - | >0.07 |
Number of antibiotics used for the treatment of clinical mastitis | S | Professional involvement of farmer | 0.011 |
G | Professional involvement of farmer | 0.015 |
Administration of antibiotics in cases in abortion | S | Experience of the farmer | 0.001 |
Season of start of the lambing period | 0.007 |
Daily period spent by the farmer at the farm | 0.010 |
Age of farmer | 0.012 |
G | Age of farmer | 0.05 |
Routine administration of antibiotics to newborns | S | Education of farmer | 0.047 |
G | - | >0.11 |
Administration of antibiotics in cases of pneumonia | S | Family farming tradition | 0.043 |
G | - | >0.15 |
Administration of antibiotics in cases of diarrhoea | S | Administration of antibiotics at the dose prescribed | 0.017 |
Routine administration of antibiotics to newborns | 0.048 |
G | - | >0.10 |