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Article

Label-Free Surface-Enhanced Raman Spectroscopy with Machine Learning for the Diagnosis of Thyroid Cancer by Using Fine-Needle Aspiration Liquid Samples

1
Department of Pathology, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, 197 Ruijin Second Road, Shanghai 200025, China
2
School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai 200030, China
3
Department of General Surgery, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, 197 Ruijin Second Road, Shanghai 200025, China
*
Author to whom correspondence should be addressed.
Biosensors 2024, 14(8), 372; https://doi.org/10.3390/bios14080372
Submission received: 13 June 2024 / Revised: 25 July 2024 / Accepted: 26 July 2024 / Published: 31 July 2024

Abstract

The incidence of thyroid cancer is increasing worldwide. Fine-needle aspiration (FNA) cytology is widely applied with the use of extracted biological cell samples, but current FNA cytology is labor-intensive, time-consuming, and can lead to the risk of false-negative results. Surface-enhanced Raman spectroscopy (SERS) combined with machine learning algorithms holds promise for cancer diagnosis. In this study, we develop a label-free SERS liquid biopsy method with machine learning for the rapid and accurate diagnosis of thyroid cancer by using thyroid FNA washout fluids. These liquid supernatants are mixed with silver nanoparticle colloids, and dispersed in quartz capillary for SERS measurements to discriminate between healthy and malignant samples. We collect Raman spectra of 36 thyroid FNA samples (18 malignant and 18 benign) and compare four classification models: Principal Component Analysis–Linear Discriminant Analysis (PCA-LDA), Random Forest (RF), Support Vector Machine (SVM), and Convolutional Neural Network (CNN). The results show that the CNN algorithm is the most precise, with a high accuracy of 88.1%, sensitivity of 87.8%, and the area under the receiver operating characteristic curve of 0.953. Our approach is simple, convenient, and cost-effective. This study indicates that label-free SERS liquid biopsy assisted by deep learning models holds great promise for the early detection and screening of thyroid cancer.
Keywords: Raman spectroscopy; thyroid fluid; machine learning; CNN; liquid biopsy Raman spectroscopy; thyroid fluid; machine learning; CNN; liquid biopsy

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MDPI and ACS Style

Gao, L.; Wu, S.; Wongwasuratthakul, P.; Chen, Z.; Cai, W.; Li, Q.; Lin, L.L. Label-Free Surface-Enhanced Raman Spectroscopy with Machine Learning for the Diagnosis of Thyroid Cancer by Using Fine-Needle Aspiration Liquid Samples. Biosensors 2024, 14, 372. https://doi.org/10.3390/bios14080372

AMA Style

Gao L, Wu S, Wongwasuratthakul P, Chen Z, Cai W, Li Q, Lin LL. Label-Free Surface-Enhanced Raman Spectroscopy with Machine Learning for the Diagnosis of Thyroid Cancer by Using Fine-Needle Aspiration Liquid Samples. Biosensors. 2024; 14(8):372. https://doi.org/10.3390/bios14080372

Chicago/Turabian Style

Gao, Lili, Siyi Wu, Puwasit Wongwasuratthakul, Zhou Chen, Wei Cai, Qinyu Li, and Linley Li Lin. 2024. "Label-Free Surface-Enhanced Raman Spectroscopy with Machine Learning for the Diagnosis of Thyroid Cancer by Using Fine-Needle Aspiration Liquid Samples" Biosensors 14, no. 8: 372. https://doi.org/10.3390/bios14080372

APA Style

Gao, L., Wu, S., Wongwasuratthakul, P., Chen, Z., Cai, W., Li, Q., & Lin, L. L. (2024). Label-Free Surface-Enhanced Raman Spectroscopy with Machine Learning for the Diagnosis of Thyroid Cancer by Using Fine-Needle Aspiration Liquid Samples. Biosensors, 14(8), 372. https://doi.org/10.3390/bios14080372

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