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Article

Geo-Referenced Factor-Graph SLAM for Orchard-Scale 3D Apple Reconstruction and Yield Estimation

by
Dheeraj Bharti
1,
Lilian Nogueira de Faria
1,
Luciano Vieira Koenigkan
1,
Luciano Gebler
2,
Andrea de Rossi Santos
2,1,* and
Thiago Teixeira Santos
1,*
1
Embrapa Agricultura Digital, Campinas 13083-886, Brazil
2
Embrapa Uva e Vinho, Vacaria 95200-000, Brazil
*
Authors to whom correspondence should be addressed.
Agriculture 2026, 16(7), 764; https://doi.org/10.3390/agriculture16070764
Submission received: 25 February 2026 / Revised: 20 March 2026 / Accepted: 23 March 2026 / Published: 30 March 2026
(This article belongs to the Special Issue Application of Smart Technologies in Orchard Management)

Abstract

Accurate and spatially resolved yield estimation is a critical requirement for precision agriculture and orchard management. This paper presents a geometrically consistent, orchard-scale apple yield estimation framework that integrates GNSS–visual-inertial odometry (VIO) fusion, deep learning-based object detection, multi-frame tracking, three-dimensional triangulation, and incremental factor-graph optimization. Camera poses are obtained using ZED GNSS–VIO fusion and subsequently refined using an iSAM2-based nonlinear smoothing approach that incorporates strong relative-motion constraints and soft global ENU (East-North-Up) translation priors. Apples are detected using a YOLO-based model and associated across frames via CoTracker3, enabling robust multi-view landmark reconstruction. Reprojection factors and landmark priors are incorporated into a unified nonlinear factor graph to jointly optimize camera trajectories and 3D apple positions. The reconstructed apples are spatially aggregated into a grid-based mass map, where individual fruit volumes are estimated assuming spherical geometry and converted to mass using density models. The resulting ENU-referenced yield plot provides a structured representation of orchard production variability. Experimental results demonstrate significant reductions in reprojection error after optimization and improved global consistency of the trajectory, leading to stable and spatially coherent 3D reconstructions. The proposed pipeline bridges perception, geometry, and optimization, providing a scalable solution for orchard-scale yield mapping and decision support in precision agriculture.
Keywords: SLAM; visual odometry; iSAM2; 3D reconstruction; yield estimation SLAM; visual odometry; iSAM2; 3D reconstruction; yield estimation

Share and Cite

MDPI and ACS Style

Bharti, D.; Faria, L.N.d.; Koenigkan, L.V.; Gebler, L.; Santos, A.d.R.; Santos, T.T. Geo-Referenced Factor-Graph SLAM for Orchard-Scale 3D Apple Reconstruction and Yield Estimation. Agriculture 2026, 16, 764. https://doi.org/10.3390/agriculture16070764

AMA Style

Bharti D, Faria LNd, Koenigkan LV, Gebler L, Santos AdR, Santos TT. Geo-Referenced Factor-Graph SLAM for Orchard-Scale 3D Apple Reconstruction and Yield Estimation. Agriculture. 2026; 16(7):764. https://doi.org/10.3390/agriculture16070764

Chicago/Turabian Style

Bharti, Dheeraj, Lilian Nogueira de Faria, Luciano Vieira Koenigkan, Luciano Gebler, Andrea de Rossi Santos, and Thiago Teixeira Santos. 2026. "Geo-Referenced Factor-Graph SLAM for Orchard-Scale 3D Apple Reconstruction and Yield Estimation" Agriculture 16, no. 7: 764. https://doi.org/10.3390/agriculture16070764

APA Style

Bharti, D., Faria, L. N. d., Koenigkan, L. V., Gebler, L., Santos, A. d. R., & Santos, T. T. (2026). Geo-Referenced Factor-Graph SLAM for Orchard-Scale 3D Apple Reconstruction and Yield Estimation. Agriculture, 16(7), 764. https://doi.org/10.3390/agriculture16070764

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