Molecular Detection and Characterization of Coronaviruses in Migratory Ducks from Portugal Show the Circulation of Gammacoronavirus and Deltacoronavirus
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Sample Collection
2.2. Screening for Coronaviruses
2.3. Sanger Sequencing and Phylogenetic Analysis
3. Results
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Collection Site | Sample ID | Host Species | Accession Number | CoV Genera |
---|---|---|---|---|
Evoa | #0 | Anas acuta | ON368935 | Gammacoronavirus |
#7 | Anas acuta | ON368937 | Gammacoronavirus | |
#9 | Anas acuta | ON368938 | Gammacoronavirus | |
#13 | Anas acuta | ON368940 | Gammacoronavirus | |
#14 | Anas acuta | ON368941 | Gammacoronavirus | |
#16 | Anas acuta | ON368942 | Gammacoronavirus | |
#17 | Anas acuta | ON368943 | Gammacoronavirus | |
#18 | Anas acuta | ON368944 | Gammacoronavirus | |
#19 | Anas acuta | ON368945 | Gammacoronavirus | |
#22 | Anas acuta | ON368946 | Gammacoronavirus | |
#23 | Anas acuta | ON368947 | Gammacoronavirus | |
#26 | Anas crecca | ON368948 | Gammacoronavirus | |
#30 | Anas crecca | ON368949 | Gammacoronavirus | |
#32 | Anas crecca | ON368950 | Gammacoronavirus | |
#38 | Anas crecca | ON368953 | Gammacoronavirus | |
#EV2 | Anas acuta | ON721383 | Deltacoronavirus | |
#EV4 | Anas platyrhynchos | ON721382 | Gammacoronavirus | |
#EV5 | Anas acuta | ON721381 | Gammacoronavirus | |
S São Jacinto Dunes Nature Reserve | ##EV8 | Anas platyrhynchos | ON721380 | Gammacoronavirus |
#SJ12 | Anas platyrhynchos | ON368939 | Gammacoronavirus | |
#SJ16 | Anas platyrhynchos | ON368936 | Gammacoronavirus | |
#SJ35 | Anas platyrhynchos | ON368951 | Gammacoronavirus | |
#SJ39 | Anas platyrhynchos | ON368952 | Gammacoronavirus | |
#SJ41 | Anas platyrhynchos | ON368954 | Gammacoronavirus |
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Hemnani, M.; Rodrigues, D.; Santos, N.; Santos-Silva, S.; Figueiredo, M.E.; Henriques, P.; Ferreira-e-Silva, J.; Rebelo, H.; Poeta, P.; Thompson, G.; et al. Molecular Detection and Characterization of Coronaviruses in Migratory Ducks from Portugal Show the Circulation of Gammacoronavirus and Deltacoronavirus. Animals 2022, 12, 3283. https://doi.org/10.3390/ani12233283
Hemnani M, Rodrigues D, Santos N, Santos-Silva S, Figueiredo ME, Henriques P, Ferreira-e-Silva J, Rebelo H, Poeta P, Thompson G, et al. Molecular Detection and Characterization of Coronaviruses in Migratory Ducks from Portugal Show the Circulation of Gammacoronavirus and Deltacoronavirus. Animals. 2022; 12(23):3283. https://doi.org/10.3390/ani12233283
Chicago/Turabian StyleHemnani, Mahima, David Rodrigues, Nuno Santos, Sergio Santos-Silva, Maria Ester Figueiredo, Pedro Henriques, Joana Ferreira-e-Silva, Hugo Rebelo, Patricia Poeta, Gertrude Thompson, and et al. 2022. "Molecular Detection and Characterization of Coronaviruses in Migratory Ducks from Portugal Show the Circulation of Gammacoronavirus and Deltacoronavirus" Animals 12, no. 23: 3283. https://doi.org/10.3390/ani12233283