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Article

Population-Level Uncoupling of Antimicrobial Usage and Resistance in Community-Onset Escherichia coli Bloodstream Infections

by
Peter Collignon
1,2,*,
John J. Beggs
3,
Jan M. Bell
4,
Denise Daley
4,5 and
Elizabeth Roughead on behalf of the Australian Group on Antimicrobial Resistance
6,†
1
Medical School, Australian National University, Canberra 2601, Australia
2
Microbiology, Canberra Hospital, Canberra 2605, Australia
3
Independent researcher, Melbourne 3000, Australia
4
Australian Group on Antimicrobial Resistance (AGAR), Perth 6000, Australia
5
Microbiology, Fiona Stanley Fremantle Hospitals Group, Murdoch 6961, Australia
6
College of Health, Adelaide University, Adelaide 5000, Australia
*
Author to whom correspondence should be addressed.
Membership of the Group Name is provided in the Supplementary Materials.
Pathogens 2026, 15(7), 670; https://doi.org/10.3390/pathogens15070670 (registering DOI)
Submission received: 12 May 2026 / Revised: 21 June 2026 / Accepted: 23 June 2026 / Published: 25 June 2026
(This article belongs to the Section Bacterial Pathogens)

Abstract

Background: Antimicrobial resistance (AMR) is widely considered to be driven by antimicrobial consumption through within-host selection. However, whether this mechanism adequately explains population-level patterns of resistance in invasive infections remains uncertain. If antimicrobial use is the dominant determinant, resistance should be highest in demographic groups with the greatest exposure. Methods: We conducted a retrospective analysis of 44,792 community-onset Escherichia coli bloodstream infection episodes identified through national Australian surveillance data (2013–2024). Resistance prevalence across individual antimicrobials and composite multidrug resistance panels was analysed by age and sex. These data were compared with community antimicrobial dispensing derived from the Pharmaceutical Benefits Scheme. Mean resistance was modelled as a function of age and sex. Results: Antimicrobial use was substantially higher in females than males (~23% overall) and increased markedly with age, with individuals aged ≥80 years receiving approximately three times more antimicrobials than those aged 25–30 years. In contrast, resistance was consistently lower in females across most antimicrobials and composite measures. Resistance demonstrated an inverted U-shaped age distribution, peaking at 30–40 years before declining in older age groups. From early adulthood to older age, antimicrobial dispensing increased threefold, whereas mean resistance declined by approximately 20%. These patterns were consistent across antimicrobial classes, years, and jurisdictions. Conclusions: These findings show that demographic patterns of antimicrobial resistance in community-onset E. coli bloodstream infections are not well explained by a simple population-level consumption model. These findings should be interpreted as important hypothesis-generating insights. Although antimicrobial exposure remains important for individual-level selection, the observed discordance between prescribing and resistance suggests that other factors, including differences in transmission pathways, healthcare contact, disease prevalence, community sanitation and socioeconomic circumstances may also significantly shape resistance patterns.
Keywords: antibiotics; antimicrobial resistance; AMR; age; sex; E. coli; gender; sex: elderly; bloodstream infections antibiotics; antimicrobial resistance; AMR; age; sex; E. coli; gender; sex: elderly; bloodstream infections

Share and Cite

MDPI and ACS Style

Collignon, P.; Beggs, J.J.; Bell, J.M.; Daley, D.; Resistance, E.R.o.b.o.t.A.G.o.A. Population-Level Uncoupling of Antimicrobial Usage and Resistance in Community-Onset Escherichia coli Bloodstream Infections. Pathogens 2026, 15, 670. https://doi.org/10.3390/pathogens15070670

AMA Style

Collignon P, Beggs JJ, Bell JM, Daley D, Resistance ERobotAGoA. Population-Level Uncoupling of Antimicrobial Usage and Resistance in Community-Onset Escherichia coli Bloodstream Infections. Pathogens. 2026; 15(7):670. https://doi.org/10.3390/pathogens15070670

Chicago/Turabian Style

Collignon, Peter, John J. Beggs, Jan M. Bell, Denise Daley, and Elizabeth Roughead on behalf of the Australian Group on Antimicrobial Resistance. 2026. "Population-Level Uncoupling of Antimicrobial Usage and Resistance in Community-Onset Escherichia coli Bloodstream Infections" Pathogens 15, no. 7: 670. https://doi.org/10.3390/pathogens15070670

APA Style

Collignon, P., Beggs, J. J., Bell, J. M., Daley, D., & Resistance, E. R. o. b. o. t. A. G. o. A. (2026). Population-Level Uncoupling of Antimicrobial Usage and Resistance in Community-Onset Escherichia coli Bloodstream Infections. Pathogens, 15(7), 670. https://doi.org/10.3390/pathogens15070670

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