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Article

A New Class of BRCA1 Mimetics for ERα-Positive Breast Cancer Therapy: Design, Synthesis, In Silico Screening, In Vitro Assay, and Gene Expression Analysis

by
Pottabathula Shyam Sundar
1,
Jubie Selvaraj
2,*,
Veerachamy Alagarsamy
3,
Viswas Raja Solomon
3,4,* and
Jawahar Natarajan
5
1
Department of Pharmaceutical Chemistry, Vasantidevi Patil Institute of Pharmacy, Kodoli 416114, Maharastra, India
2
Department of Pharmaceutical Chemistry, JSS College of Pharmacy, JSS Academy of Higher Education & Research, Ooty 643001, Tamilnadu, India
3
Department of Pharmaceutical Chemistry, MNR College of Pharmacy, Sangareddy 502294, Telangana, India
4
Department of Chemistry, University of Saskatchewan, Saskatoon, SK S7N 5A2, Canada
5
Department of Pharmaceutics, JSS College of Pharmacy, JSS Academy of Higher Education & Research, Ooty 643001, Tamilnadu, India
*
Authors to whom correspondence should be addressed.
Life 2025, 15(4), 581; https://doi.org/10.3390/life15040581
Submission received: 20 February 2025 / Revised: 8 March 2025 / Accepted: 26 March 2025 / Published: 1 April 2025

Abstract

Breast Cancer Gene 1 (BRCA1) offers a potential approach for ERα repression by blocking cyclin D1’s interaction with ERα, which prevents cells from growing and dividing too rapidly or uncontrollably. When BRCA1 levels are low, BRCA1 mimetics fit into the BRCA1-binding pocket within ERα, mimicking the ability of BRCA1 to inhibit ERα activity. This study aims to identify a novel class of lead molecules for BRCA1 mimetics for ER-positive breast cancer, distinct from conventional antiestrogen therapies in their mechanism of action. In this article, coumarin thiosemicarbazone hybrids were synthesized from 7-hydroxy 4-methyl coumarin/4-hydroxy coumarin and thiosemicarbazide with different aldehydes and evaluated for their ERα repression activity. The most active compounds in the series, 9b, 9l, and 9m, exhibited significant potency with an IC50 value of 14.49 µM, 35.08 µM and 42.12 µM, respectively, compared to raloxifene (reported) as the positive control with an IC50 value of 13.7 µM. The gene expression study confirmed the downregulation of the cyclin D1 gene for the compounds 9l (−0.217) and 9m (−0.214). Similarly, the downregulation of the BCL2 gene for the compounds 9b (−0.373), 9l (−0.320), and 9m (−0.376). Also, molecular docking studies and MMGBSA were performed to determine key interactions between compounds and ERα at the BRCA1 binding pocket (AA 338–387). In silico, ADMET properties were executed to illustrate the druggability and safety of the novel derivatives. In silico, in vitro, and gene expression studies revealed that among all the compounds, 9b, 9l, and 9m are promising candidates for the development of lead molecules targeting ERα inhibitors for breast cancer treatment. Moreover, the concept of ERα repression with small molecules as BRCA1 mimetics is novel. In general, it can be concluded that these compounds can serve as promising leads to the design of potential BRCA1 mimetics.
Keywords: BRCA1; cyclin D1; BCL2; Glide XP; MMGBSA; qRT-PCR; ERα; breast cancer; gene expression BRCA1; cyclin D1; BCL2; Glide XP; MMGBSA; qRT-PCR; ERα; breast cancer; gene expression

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MDPI and ACS Style

Shyam Sundar, P.; Selvaraj, J.; Alagarsamy, V.; Solomon, V.R.; Natarajan, J. A New Class of BRCA1 Mimetics for ERα-Positive Breast Cancer Therapy: Design, Synthesis, In Silico Screening, In Vitro Assay, and Gene Expression Analysis. Life 2025, 15, 581. https://doi.org/10.3390/life15040581

AMA Style

Shyam Sundar P, Selvaraj J, Alagarsamy V, Solomon VR, Natarajan J. A New Class of BRCA1 Mimetics for ERα-Positive Breast Cancer Therapy: Design, Synthesis, In Silico Screening, In Vitro Assay, and Gene Expression Analysis. Life. 2025; 15(4):581. https://doi.org/10.3390/life15040581

Chicago/Turabian Style

Shyam Sundar, Pottabathula, Jubie Selvaraj, Veerachamy Alagarsamy, Viswas Raja Solomon, and Jawahar Natarajan. 2025. "A New Class of BRCA1 Mimetics for ERα-Positive Breast Cancer Therapy: Design, Synthesis, In Silico Screening, In Vitro Assay, and Gene Expression Analysis" Life 15, no. 4: 581. https://doi.org/10.3390/life15040581

APA Style

Shyam Sundar, P., Selvaraj, J., Alagarsamy, V., Solomon, V. R., & Natarajan, J. (2025). A New Class of BRCA1 Mimetics for ERα-Positive Breast Cancer Therapy: Design, Synthesis, In Silico Screening, In Vitro Assay, and Gene Expression Analysis. Life, 15(4), 581. https://doi.org/10.3390/life15040581

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