Addiction Susceptibility: Genetic Factors, Personality Traits, and Epigenetic Interactions with the Gut Microbiome
Abstract
1. Introduction
1.1. Etiology and Risk Factors
1.2. Personality Traits
1.3. Genetics and Epigenetics
1.4. The Gut–Brain Axis
1.5. Genomic Technologies
1.6. Aim of the Review
2. Association of Gene Regulation with Personality Traits
3. Genetics of Substance Use Disorders
3.1. Specific Molecular Genetic Targets and Substances of Abuse
3.1.1. Alcohol Use Disorder
3.1.2. Cannabis Use Disorder
3.1.3. Opioid Use Disorder
3.1.4. Tobacco Use Disorder
3.2. Genetic Epidemiology of Substance Use Disorders
3.3. Genetic Approaches to Causality in Substance Use Disorders
4. The Roles of Genes and Personality in Addiction
5. Epigenetic Influences on Addiction
5.1. The Role of the Gut Microbiome
5.1.1. Substance Use and Gut Microbiome Composition
5.1.2. Social and Microbial Influences on Substance Use Risk
5.1.3. The Gut Microbiome and Personality Traits
6. Discussion
7. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| ACEs | Adverse childhood experiences |
| ADHD | Attention-deficit/hyperactivity disorder |
| ASD | Autism spectrum disorder |
| AUD | Alcohol use disorder |
| AUDIT | Alcohol use disorder identification test |
| BAs | Bile acids |
| BBB | Blood–brain barrier |
| BD | Bipolar disorder |
| BMI | Body mass index |
| ChIP | Chromatin immunoprecipitation |
| CNR1 | Cannabinoid receptor 1 |
| CUD | Cannabis use disorder |
| DNAm | DNA methylation |
| DRD2 | Dopamine D2 receptor |
| ELS | Early-life stress |
| eQTLs | Expression quantitative trait loci |
| EWAS | Epigenome-wide association study |
| FMT | Fecal microbiota transplantation |
| GBA | Gut–brain axis |
| GD | Gambling disorder |
| GM | Gut microbiome |
| GWAS | Genome-wide association studies |
| HPA | Hypothalamic–pituitary–adrenal |
| IPTs | Impulsive personality traits |
| KYNA | Kynurenic acid |
| MDD | Major depressive disorder |
| MPRAs | Massively parallel reporter assays |
| MR | Mendelian randomization |
| NAc | Nucleus accumbens |
| NEO-FFI | NEO Five-Factor Inventory |
| ND | Nicotine dependence |
| NGS | Next-generation sequencing |
| NS | Novelty seeking |
| OFC | Orbitofrontal cortex |
| OUD | Opioid use disorder |
| PAU | Problematic alcohol use |
| PGC | Psychiatric Genomics Consortium |
| PGS | Polygenic scores |
| PTSD | Post-traumatic stress disorder |
| RCT | Randomized controlled trial |
| RD | Reward dependence |
| rg | Genetic correlation |
| rsFC | Resting-state functional connectivity |
| SCFAs | Short-chain fatty acids |
| SES | Socioeconomic status |
| SNP | Single-nucleotide polymorphism |
| STAI | State-Trait Anxiety Inventory |
| SUD | Substance use disorders |
| TUD | Tobacco use disorder |
| VTA | Ventral tegmental area |
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| Features | AUD | CUD | OUD | TUD |
|---|---|---|---|---|
| GWAS risk-loci | ADH1B rs1229984 [141] | CHRNA2 rs4732724 [120] | BEND4 (gene-wise) [142] | CHRNA4 rs151176846 [127] |
| ALDH2 rs671 [103] | CSMD1 rs77378271 [136] | CNIH3 rs10799590 [124] | CHRNA5 rs16969968 [128] | |
| DRD2 rs4936277 [106] | EPHX2 rs4732724 [118] | KCNG2 rs62103177 [123] | CHRNA5-A3-B4 (multiple loci) [126] | |
| GCKR rs1260326 [143] | FOXP2 rs7783012 [118] | OPRM1 rs1799971 [108] | DBH rs13284520 [128] | |
| KLB rs13129401 [108] | PDE4B (gene-wise) [102] | RGMA rs12442183 [122] | DNMT3B rs910083 [129] | |
| SLC39A8 rs13107325 [143] | ||||
| Drinks per week (rg = +0.77) [84] | AUD (rg = +0.55) [118] | ADHD (rg = +0.36) [108] | Alcohol dependence (rg = +0.56) [128] | |
| Ever smoked regularly (rg = +0.55) [84] | Educational attainment (rg = −0.39) [118] | Alcohol dependence (rg = +0.73) [108] | Cigarettes per day (rg = +0.95) [128] | |
| Genetic correlations with | Lifetime cannabis use (rg = +0.39) [84] | Lifetime cannabis use (rg = +0.50) [118] | Drinks per week (rg = +0.38) [108] | MDD (rg = +0.38) [128] |
| MDD (rg = +0.39) [84] | Schizophrenia (rg = +0.31) [118] | Ever smoked regularly (rg = +0.51) [108] | Schizophrenia (rg = +0.16) [128] | |
| Risk-taking (rg = +0.30) [84] | Smoking initiation (rg = +0.66) [118] | MDD (rg = +0.35) [108] | Smoking initiation (rg = +0.40) [128] | |
| SUD genetic epidemiology | AUD heritability (h2) = 0.50 [131] | CUD heritability (h2) = 0.48–0.51 [136] | ||
| Alcohol use initiation (h2 = 0.37) [132] | Cannabis use/initiation (h2 = 0.30–0.50) [137] | OUD heritability (h2) = 0.34–0.50 [139,140] | TUD heritability (h2) = 0.30–0.70 [134,135] | |
| Alcohol use frequency (h2 = 0.37–0.50) [133] |
| Traits | Childhood | Association | Adults | Association | References |
|---|---|---|---|---|---|
| Negative | Positive | Negative | Positive | ||
| Surgency, Extraversion and Openness | Bacteroides | Enterobacteriaceae Rikenellaceae Ruminococcacea Bifidobacterium Dialister Parabacteroides Streptococcus | Fusobacterium | NE | [261,262,263] |
| Emotional reactivity | NE | Bifidobacterium Erwinia Rothia Serratia Streptococcus | NE | NE | [261,264,265] |
| Fear response/ Threat acquisition | Bacteroides Clostridium | Lachnospiraceae Rikenellaceae Atopobium Bifidobacterium Bilophila Dialister Lactobacillus Parabacteroides Peptoniphilus Roseburia Veillonella | NE | Agathobacter Alistipes Bacteroides Butyricicoccus Faecalibacterium Phocea Tyzzerella Veillonella | [261,262,264,265,266,267,268] |
| Neuroticism/ Depression | NE | Akkermansia | Corynebacterium Megamonas Odoribacter Streptococcus | Members of the phylum Pseudomonadota Bifidobacterium Desulfovibrio Haemophilus | [257,258,259,263,265,269,270] |
| Conscientiousness/ Attentional focusing | Alistipes | NE | Members of the phylum Pseudomonadota Alistipes Megamonas Sudoligranulum | Lachnospiraceae Lachnospira | [257,259,263,271] |
| Sociability/ Cuddliness/ Soothability | Hungatella | Akkermansia Bifidobacterium | Desulfovibrio Sutterella | Akkermansia Lactococcus Oscillospira | [258,271,272,273] |
| Happiness | NE | NE | NE | Bifidobacterium Clostridium | [269] |
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Borrego-Ruiz, A.; Borrego, J.J. Addiction Susceptibility: Genetic Factors, Personality Traits, and Epigenetic Interactions with the Gut Microbiome. Genes 2025, 16, 1447. https://doi.org/10.3390/genes16121447
Borrego-Ruiz A, Borrego JJ. Addiction Susceptibility: Genetic Factors, Personality Traits, and Epigenetic Interactions with the Gut Microbiome. Genes. 2025; 16(12):1447. https://doi.org/10.3390/genes16121447
Chicago/Turabian StyleBorrego-Ruiz, Alejandro, and Juan J. Borrego. 2025. "Addiction Susceptibility: Genetic Factors, Personality Traits, and Epigenetic Interactions with the Gut Microbiome" Genes 16, no. 12: 1447. https://doi.org/10.3390/genes16121447
APA StyleBorrego-Ruiz, A., & Borrego, J. J. (2025). Addiction Susceptibility: Genetic Factors, Personality Traits, and Epigenetic Interactions with the Gut Microbiome. Genes, 16(12), 1447. https://doi.org/10.3390/genes16121447

