Identification and Functional Analysis of Key Factors Determining the Different Pathogenicity of Two Tomato Leaf Curl New Delhi Virus Isolates in Cucurbitaceous Plants
Abstract
1. Introduction
2. Materials and Methods
2.1. Plant Materials and Growth Conditions
2.2. DNA Extraction, PCR Amplification, Cloning, and Sequencing
2.3. Sequence Analysis
2.4. Construction of Plasmids
2.5. Agroinfiltration and Virus Inoculation
2.6. Mechanical Transmission of ToLCNDV
2.7. RNA Extraction, RT-qPCR and qPCR
2.8. Protein Extraction and Western Blot
3. Results
3.1. Detection of ToLCNDV from Two Different Regions in Melon
3.2. Characterization and Phylogenetic Analysis of Two ToLCNDV Isolates Among Begomoviruses
3.3. Differences in Infectivity and Pathogenicity Between the Infectious Clones of ToLCNDV-HB and ToLCNDV-JS
3.4. Screening for the Virulence Factor of Differential Pathogenicity Between ToLCNDV-HB and ToLCNDV-JS
3.5. AV2 Is a Determinant of Pathogenicity Difference Between ToLCNDV-HB and ToLCNDV-JS
3.6. Sap Transmission of the Infectious Clone of ToLCNDV-HB and ToLCNDV-JS
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| ToLCNDV | tomato leaf curl New Delhi virus |
| ORF | Open reading frame |
| PTGS | Post-transcriptional gene silencing |
| CP | Coat protein |
| Rep | Replication-associated protein |
| TrAP | Transcription activator protein |
| REn | Replication enhancer protein |
| NSP | Nuclear shuttle protein |
| MP | Movement protein |
| CTAB | cetyltrimethyl ammonium bromide |
| PVX | potato virus X |
| GFP | Green fluorescent protein |
| TYLCCNB | tomato yellow leaf curl China betasatellite |
| TBSV | tomato bushy stunt virus |
| EPPO | European and Mediterranean Plant Protection Organization |
| VSR | Viral suppressor of RNA silencing |
| dpi | Days post-inoculation |
| qPCR | Quantitative polymerase chain reaction |
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| Plant Species | Varieties | No. of Plants Inoculated | No. of Plants Infected (HB/JS) | Infection Efficiency (%) (HB/JS) | Symptoms |
|---|---|---|---|---|---|
| Nicotiana benthamiana | Laboratory Strain | 20 | 20/20 | 100/100 | Leaf curling downward |
| Solanum lycopersicum | ‘Money Maker’ | 20 | 10/2 | 50/10 | NA |
| Cucumis melon | ‘Mao hua tian fei’ | 20 | 16/14 | 80/70 | Leaf curling downward and chlorosis |
| Lagenaria siceraria | ‘Li nong’ | 20 | 20/18 | 100/90 | Leaf curling downward and chlorosis |
| Cucurbita pepo | ‘Cui jing’ | 20 | 10/8 | 50/40 | Leaf curling downward and mottling |
| Luffa cylindrica | ‘Shou he duo bao rou’ | 20 | 6/4 | 30/20 | Leaf curling downward and surface shrinking |
| Citrullus lanatus | ‘ZZJM’ | 20 | 0/0 | 0/0 | NA |
| Cucumis sativus | ‘Lv rang xiu chun’ | 20 | 0/0 | 0/0 | NA |
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Chen, Y.; Xia, Z.; Wu, Y.; Zhou, X.; Li, F. Identification and Functional Analysis of Key Factors Determining the Different Pathogenicity of Two Tomato Leaf Curl New Delhi Virus Isolates in Cucurbitaceous Plants. Agronomy 2026, 16, 568. https://doi.org/10.3390/agronomy16050568
Chen Y, Xia Z, Wu Y, Zhou X, Li F. Identification and Functional Analysis of Key Factors Determining the Different Pathogenicity of Two Tomato Leaf Curl New Delhi Virus Isolates in Cucurbitaceous Plants. Agronomy. 2026; 16(5):568. https://doi.org/10.3390/agronomy16050568
Chicago/Turabian StyleChen, Yuan, Zihao Xia, Yuanhua Wu, Xueping Zhou, and Fangfang Li. 2026. "Identification and Functional Analysis of Key Factors Determining the Different Pathogenicity of Two Tomato Leaf Curl New Delhi Virus Isolates in Cucurbitaceous Plants" Agronomy 16, no. 5: 568. https://doi.org/10.3390/agronomy16050568
APA StyleChen, Y., Xia, Z., Wu, Y., Zhou, X., & Li, F. (2026). Identification and Functional Analysis of Key Factors Determining the Different Pathogenicity of Two Tomato Leaf Curl New Delhi Virus Isolates in Cucurbitaceous Plants. Agronomy, 16(5), 568. https://doi.org/10.3390/agronomy16050568

