Uncertainty Analysis of Gross Primary Production (GPP) Remote-Sensing Products and Its Influencing Factors in Southwest China
Highlights
- GPP products in Southwest China exhibit broadly consistent large-scale spatial patterns, but show substantial differences in magnitude, temporal variability, and uncertainty across model categories and temporal scales.
- Machine-learning-based GPP products demonstrate higher stability and lower relative uncertainty than other products, while vegetation indices, topography, and radiation emerge as the dominant drivers of GPP uncertainty.
- Quantitative uncertainty assessment using three-cornered hat and explainable machine learning methods provides an effective framework for evaluating GPP products in regions with complex terrain and sparse flux towers.
- The results offer practical guidance for region-specific GPP product selection and highlight key pathways for reducing uncertainty in carbon sink assessment under heterogeneous environmental conditions.
Abstract
1. Introduction
2. Materials and Methods
2.1. Study Area
2.2. Materials
2.2.1. GPP Remote-Sensing Products
- (1)
- LUE Products
- (a)
- The Moderate Resolution Imaging Spectroradiometer (MODIS) GPP product is derived based on the classical LUE framework. In this model, temperature and water stress are represented by the daily minimum temperature and the vapour pressure deficit (VPD), respectively [5,23]. In this study, we used the MOD17A2H V6.1 product, which is available from https://developers.google.com/earth-engine/datasets/catalog/MODIS_061_MOD17A2H (accessed on 12 February 2025). The estimation equation is given by:where is the fraction of photosynthetically active radiation absorbed by the canopy, is the photosynthetically active radiation, is the maximum light use efficiency, and are the temperature and water stress scalars, respectively, denotes the daily minimum temperature, and represents the vapour pressure deficit.
- (b)
- The Vegetation Photosynthesis Model (VPM) is developed based on the traditional LUE framework, with an emphasis on the regulation of actual light use efficiency by temperature, moisture, and phenology. The model employs the Land Surface Water Index (LSWI) to characterize water stress [24,25]. The dataset used in this study was obtained from https://data.casearth.cn/dataset/5c19a5660600cf2a3c557ad3?utm_source=chatgpt.com (accessed on 12 February 2025). The estimation equation is given by:where is the temperature scalar, and represent water and phenology stress functions, respectively, and denotes the land surface water index.
- (c)
- The Eddy Covariance Light Use Efficiency (EC-LUE) GPP is a flux-based approach that estimates GPP using eddy covariance tower observations. It assumes that light use efficiency is jointly constrained by temperature and water availability, with a focus on parameter optimization and generalization at the site scale [26,27]. The dataset used in this study was obtained from https://figshare.com/articles/dataset/Improved_estimate_of_global_gross_primary_production_for_reproducing_its_long-term_variation_1982-2017/8942336/3 (accessed on 12 February 2025). The estimation equation is given by:where denotes the minimum value between and , representing their combined limitation.
- (d)
- The Two-Leaf Light Use Efficiency (TL-LUE) model builds upon the MODIS GPP framework and assumes that the canopy consists of sunlit and shaded leaves. It separately models the photosynthetic activity of both components to enhance the estimation accuracy [28]. The data source is https://datadryad.org/dataset/doi:10.5061/dryad.dfn2z352k#methodsn (accessed on 12 February 2025). The estimation formula is expressed as:where and denote the light use efficiency of sunlit and shaded leaves, respectively, and and represent the absorbed photosynthetically active radiation by sunlit and shaded leaves, respectively.
- (e)
- The Global Land Surface Satellite (GLASS) GPP product is primarily based on the EC-LUE model and is driven by temperature, radiation, and vapour pressure deficit data derived from GLASS products [29]. The data source is https://www.geodata.cn/main/ (accessed on 12 February 2025).
- (f)
- The Multi-Source Data Synergized Quantitative (MuSyQ) GPP product builds upon the GLASS GPP dataset by incorporating the clear-sky index and vegetation functional types to analyse stress responses by integrating multi-source data [30]. The data source is https://www.geodata.cn/data/index.html?word=MuSyQ (accessed on 12 February 2025). The estimation formula is given as:where denotes the clear-sky index, and and represent the light use efficiency of sunlit and shaded leaves, respectively.
- (2)
- Process products
- (a)
- Breathing Earth System Simulator (BESS) GPP product is driven by multiple modules and represents a coupled simulation system integrating atmospheric radiative transfer, canopy radiative transfer, photosynthesis, two-leaf canopy conductance and temperature, and evapotranspiration. GPP is directly derived from energy and mass flux processes within this framework [31]. Data source: https://www.environment.snu.ac.kr/bessv2 (accessed on 12 February 2025).
- (b)
- Penman–Monteith–Leuning (PML) GPP is based on the Penman–Monteith–Leuning framework, which applies stomatal conductance theory to couple transpiration and photosynthesis. By constraining GPP and evapotranspiration (ET) simultaneously, the model enhances estimation robustness. Data source: https://zenodo.org/records/10647618 (accessed on 12 February 2025).
- (3)
- ML products
- (a)
- FLUXCOM GPP uses flux-tower-derived GPP as the reference and is computed using multiple machine learning algorithms [32]. The database provides two global gridded products: one driven by MODIS remote-sensing (RS) data and another driven by a combination of remote-sensing and meteorological (RS + METEO) data. In this study, the RS product with a spatial resolution of 0.083° is used. Data source: http://fluxcom.org/ (accessed on 12 February 2025).
- (b)
- Upscaling Ecosystem Dynamics with ARtificial intelligence (CEDAR) is a ML upscaling model that explicitly accounts for the atmospheric CO2 fertilisation effect, enabling more accurate estimation of terrestrial ecosystem carbon sink capacity [33]. In this study, the ST_DT GPP product from CEDAR is used. Data source: https://zenodo.org/records/8212707 (accessed on 12 February 2025).
- (c)
- Ensemble Random Forest (ERF) GPP is an upscaled dataset constructed using an ensemble random forest framework. By integrating multiple models, this approach improves generalisation performance and robustness [34]. Data source: https://bg.copernicus.org/articles/21/4285/2024/ (accessed on 12 February 2025).
- (4)
- Proxies products
- (a)
- Global OCO-2 Solar-Induced Fluorescence (GOSIF) GPP uses solar-induced chlorophyll fluorescence (SIF) as the core proxy and combines it with flux tower observations to estimate GPP [35]. Data source: https://globalecology.unh.edu/data/GOSIF-GPP.html (accessed on 12 February 2025).
- (b)
- Near-Infrared Reflectance of Vegetation (NIRv) GPP employs the near-infrared reflectance of vegetation index as a proxy for photosynthetic activity and estimates GPP using simple regression relationships [36]. Data source: https://figshare.com/articles/dataset/Long-term_1982-2018_global_gross_primary_production_dataset_based_on_NIRv/12981977/2 (accessed on 12 February 2025).
2.2.2. Ground-Based Flux Observation Data
2.2.3. Ancillary Datasets
2.3. Methods
2.3.1. Correlation Analysis
2.3.2. Trend Analysis
2.3.3. TCH Method
2.3.4. Quantitative Analysis of GPP Uncertainty
3. Results
3.1. Spatiotemporal Differences Among GPP Products
3.1.1. Spatial Differences Among GPP Products
3.1.2. Temporal Differences Among GPP Products
3.2. Uncertainty Analysis of Different GPP Products
3.2.1. Comparison Based on Flux Tower Observations
3.2.2. Relative Uncertainty of GPP Products
3.2.3. GPP Uncertainty Across Different Vegetation Types
3.3. GPP Uncertainty Under the Influencing Factors
4. Discussion
4.1. Differences Among GPP Products
4.2. Drivers of Uncertainty in GPP Products
4.3. Limitations and Outlook
5. Conclusions
- (1)
- The spatial patterns of most GPP products are broadly consistent, exhibiting a distribution characterised by “lower values in the northwest and higher values in the south”. In terms of temporal trends, GPP derived from Process model shows pronounced fluctuations in specific years (2010, 2011, and 2014), whereas variations in the other model categories are relatively small.
- (2)
- The ranking of relative uncertainty across temporal scales is daily > monthly > annual. Products based on ML exhibit higher overall stability across model categories. Among the 13 products, CEDAR has the lowest relative uncertainty and shows a strong correlation with flux tower observations (r = 0.82), whereas EC-LUE has the highest relative uncertainty and the weakest correlation with flux tower data (r = 0.29).
- (3)
- Compared with other factors, EVI, NDVI, LAI, DEM, and SRAD contribute more substantially to GPP uncertainty, indicating that vegetation parameters, topography, and radiation in the complex mountainous terrain of Southwest China are key sources of uncertainty in GPP products.
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
References
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| Type | Product | Temporal Resolution | Spatial Resolution | Temporal Coverage |
|---|---|---|---|---|
| LUE | MODIS | 8-day | 0.05° | 2000–present |
| VPM | 8-day | 0.05° | 2000–2020 | |
| EC-LUE | 8-day | 0.05° | 1982–2017 | |
| TL-LUE | 8-day | 0.05° | 1992–2020 | |
| GLASS | 8-day | 0.05° | 1982–2018 | |
| MuSyQ | 8-day | 0.05° | 1981–2018 | |
| Process | BESS | 8-day | 0.05° | 1982–2019 |
| PML | 8-day | 0.05° | 2000–2023 | |
| ML | FLUXCOM | Monthly | 0.083° | 2001–2015 |
| CEDAR | Monthly | 0.05° | 2001–2020 | |
| ERF | Monthly | 0.05° | 2001–2022 | |
| Proxies | GOSIF | 8-day | 0.05° | 2000–2024 |
| NIRv | Monthly | 0.05° | 1982–2018 |
| Site Name | Site | Longitude | Latitude | Time Period | Reference |
|---|---|---|---|---|---|
| Xishuangbanna | XSBN | 105°15′55″E | 21°55′39″N | 2003–2010 | [40] |
| Ailao Mountains | ALS | 101°01′40″E | 24°32′26″N | 2005–2007 | [39] |
| Puding | PD | 105°47′24″E | 26°21′36″N | 2015–2019 | [41] |
| Yuanjiang | YJ | 102°10′39″E | 23°28′26″N | 2013–2015 | [38] |
| Zoigê | RGE | 102°19′48″E | 32°28′48″N | 2015–2019 | [37] |
| Type | Product | r | RMSE g C m−2 mon−1 | MAE g C m−2 mon−1 |
|---|---|---|---|---|
| LUE | MODIS | 0.72 | 67.30 | 57.79 |
| VPM | 0.77 | 48.19 | 38.76 | |
| EC-LUE | 0.29 | 81.80 | 65.78 | |
| TL-LUE | 0.80 | 78.59 | 68.54 | |
| GLASS | 0.75 | 66.65 | 55.39 | |
| MuSyQ | 0.67 | 55.96 | 47.06 | |
| Process | BESS | 0.75 | 75.05 | 63.40 |
| PML | 0.49 | 77.04 | 64.49 | |
| ML | FLUXCOM | 0.73 | 50.89 | 39.13 |
| CEDAR | 0.82 | 54.33 | 43.44 | |
| ERF | 0.80 | 77.83 | 66.62 | |
| Proxies | GOSIF | 0.80 | 74.70 | 59.85 |
| NIRv | 0.56 | 84.04 | 69.06 |
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Share and Cite
Ge, Z.; Qu, Y.; Teng, H.; Tang, B.-H. Uncertainty Analysis of Gross Primary Production (GPP) Remote-Sensing Products and Its Influencing Factors in Southwest China. Remote Sens. 2026, 18, 764. https://doi.org/10.3390/rs18050764
Ge Z, Qu Y, Teng H, Tang B-H. Uncertainty Analysis of Gross Primary Production (GPP) Remote-Sensing Products and Its Influencing Factors in Southwest China. Remote Sensing. 2026; 18(5):764. https://doi.org/10.3390/rs18050764
Chicago/Turabian StyleGe, Zhongxi, Yanda Qu, Huiqin Teng, and Bo-Hui Tang. 2026. "Uncertainty Analysis of Gross Primary Production (GPP) Remote-Sensing Products and Its Influencing Factors in Southwest China" Remote Sensing 18, no. 5: 764. https://doi.org/10.3390/rs18050764
APA StyleGe, Z., Qu, Y., Teng, H., & Tang, B.-H. (2026). Uncertainty Analysis of Gross Primary Production (GPP) Remote-Sensing Products and Its Influencing Factors in Southwest China. Remote Sensing, 18(5), 764. https://doi.org/10.3390/rs18050764

