1. Introduction
Precision viticulture (PV) is commonly applied to optimize vineyard performance in terms of grape yield and quality. In this context, quantitative knowledge of canopy size is essential for efficient vineyard management, and PV applications seeking to estimate it commonly use canopy vigour maps, i.e., as expressed by Leaf Area (LA) per unit (such as plant or meter of cordon), Leaf Area Index (LAI) or by other canopy parameters (vegetation fraction and biomass) as a proxy. Mapping spatial variability of such vineyard characteristics efficiently therefore requires Remote Sensing (RS) data from satellite, aircraft, or drone platforms. In the particular case of Vertical Shoot Positioned (VSP) canopies, today the most widespread trellis system in modern vineyards in Argentina (
https://www.argentina.gob.ar (accessed on 14 June 2020), a large proportion of soil (bare or with cover crops) is exposed from the inter-row space to nadir-viewing RS. At recommended spatial resolutions, similar to plant or row spacing [
1,
2], the surface reflectance is subject to variations induced by the canopy structure and its illumination. Thus, at those resolutions, the integrated spectral signature of a VSP will not only depend on the canopy size, but also on the row and vine spacing, soil reflectance, and the proportion of shaded soil (
Figure 1). Shading has been shown to alter soil vegetation indices significantly [
3], so these will, in turn, be affected by row orientation as well as solar inclination and azimuth at the time of acquisition.
Although studies have shown that RS-derived vegetation indices such as the Normalized Difference Vegetation Index (NDVI) obtained from satellite imagery correlate well with LAI at specific locations [
4], and that variability patterns of LAI and NDVI are similar [
5], several factors affect this relationship [
6,
7]. Radiometrically-calibrated high-resolution imagery, capable of discriminating canopy extent from the ground, would be required to avoid soil or soil cover-induced effects when isolated canopy data are required [
2]. Recent studies using imagery with ground resolutions better than 0.1 m have established reliable and accurate techniques with which to isolate pure canopy from reflectance of other fractions visible to nadir-viewing sensors [
8]. Moreover, methods to compensate shaded canopy and inter-row shading have been tested successfully, although the effect of shading has proved to be disparate depending on the indices employed [
9], leading to some differences in the otherwise excellent compensation obtained. However, despite the recent proliferation of affordable drones equipped with very high-resolution multispectral cameras and the reliable procedures developed to isolate canopy values, at large scales such a service is often either expensive, difficult to secure (i.e., due to legislative restrictions or lack of service providers) or the data obtained are unsuitable for quantitative applications.
Wide-angle camera imagery is frequently susceptible to surface reflectance anisotropy and radiometric alteration [
10], and this may affect spectral values when colour balancing is applied during mosaicking, as overlapping image reflectance pixel values are averaged to erase illumination artefacts. When reflecting surfaces are not Lambertian, this correction will alter radiometric values significantly over varying reflection angles. In this sense, the use of aircraft-based systems yielding ground resolutions of 0.1 to 0.3 m at common flight altitudes, such as GTech (Outline Global Pty Ltd., Perth, Australia), Ultracam (Vexcel Imaging GmbH, Graz, Austria), as well as others with narrow fields of view, reduces this limitation but is usually too expensive to be affordable for many vineyard-scale companies. Inexpensive alternatives, ranging from 10 m resolution satellite data (e.g., the European Space Agency’s Sentinel 2 platforms) or aircraft-borne sub-metre resolution systems (e.g., Aeroptic JD3000 by Aeroptic Inc., North Andover, MA, USA) used in agriculture currently, offer multispectral resolutions which are insufficiently detailed for adequate canopy isolation. Separation of the canopy from other features improves with increasing resolution, and a rule of thumb in RS indicates that adequate mapping requires pixel sizes of at least around half the size of the feature of interest. Current UAV and high-resolution aerial imagery commonly yield resolutions of around 0.05 m to 0.10 m, i.e., roughly half the minimum typical size of a fully-grown leaf, which in practical terms is deemed adequate for fraction segregation [
8,
9]. To change the resolution with fixed focal length systems, an aircraft can only modify its flying height over the target, which in turn affects the number of flight lines required to cover a target, and thus determines acquisition cost. Moreover, even at minimum speeds, light aircraft will move some 3 to 4 cm during exposure, so if the height is reduced to obtain the nominal resolutions of the magnitude indicated, the real resolutions collected are considerably poorer. This effect may be reduced in imagery obtained from slower flying UAVs, and coarser-resolution captures where the drift described affects a smaller proportion of each pixel.
An alternative to such high-resolution imagery with which to obtain pure canopy data is to isolate this fraction’s response from pixels with resolutions that include reflectance from all the fractions, such as those obtained from the inexpensive airborne and satellite imagery mentioned, with ground resolutions around row width or greater (subsequently referred to as “moderate” resolution), that may be less susceptible to the shortcomings expressed above, in particular the effects of anisotropic reflection. Nonetheless, for aerial acquisitions, the possible impact of this characteristic should be tested in order to determine if any model obtained must consider the Bi-Directional Reflectance Factor (BDRF).
With this approach, or until the cited shortcomings associated with very high-resolution acquisitions are overcome or minimized, canopy size estimations in VSPs with no cover crops might be obtained from Vegetation Indices (VI) where the signal collected at each moderate resolution pixel is composed of varying fractions of canopy, sunlit soil, and shaded soil. Each of these fractions consists of two elements: the fractional cover or proportion and its corresponding VI. Although canopy size and its related biophysical characteristics are known to exhibit non-linear relationships with many vegetation indices, in those cases this relationship becomes linear at LAI values commonly found in vineyards and other crop canopies [
7,
11]. In addition, the non-linear relationship mentioned derives from light extinction as it is transmitted through leaf layers [
12], and as both shaded and sunlit soil are opaque surfaces, in principle the fraction elements may be linearly added with the following expression:
where the VI represents the value of the vegetation index for each fraction in each pixel, p is the proportion that each fraction contributes to moderate resolution pixel i, j, and sub-indices indicate each type of fraction (c-canopy, sun-sunlit soil, and sh-shaded soil) (
Figure 1). It must be noted that although the direction of illumination will affect the relative proportion of each of the cited fractions, the canopy itself may also modify its spectral signature as a consequence of within-canopy shading. In this study, the canopy fraction is treated as a single variable and its spectral signature variation studied as a function of the direction of illumination.
In principle, canopy size is best described by the canopy fraction p
cVI
c. Thus, elements p
c and VI
c are the terms of interest with which to estimate LA and LAI [
2,
7,
8]. Because of its widespread use in vineyard LAI determinations [
1,
4,
6], the Normalized Difference Vegetation Index (NDVI) is used as the VI with which to compare results of an unmixing technique, even when other indices may eventually prove to be more appropriate for vineyard LAI determination [
7]. The NDVI value of a moderate resolution pixel obtained from satellite or aerial imagery may be described as NDVI
int, i.e., the integrated NDVI obtained from a summation of the fractions and their corresponding NDVI values.
Considering NDVI
sun may be obtained from imagery acquired during winter, in the absence of canopy or winter cover crops, to isolate the canopy fraction all the other fraction proportions and NDVI
sh would need to be determined in such a way that the effect of incident light is compensated or corrected and the following expression, obtained from Equation (1), can be applied:
As illustrated in
Figure 1, the direction of incident light on a VSP can be expected to affect all these fraction elements, except for p
c and, possibly, NDVI
c. The angle of illumination will depend on solar elevation, azimuth, and row orientation. In addition, row spacing, and canopy height will affect the shading fraction. This study aims to explore the effect of the direction of illumination on the fractions contributing to integrated vine NDVI pixels with row-width or greater ground resolutions, in order to establish whether isolation of pure canopy response may be achieved over vineyards trained on VSP systems.
4. Discussion
Influence of soil background interference with vegetation cover estimations, based on vegetation indices obtained from moderate resolution imagery such as Landsat or SPOT, has prompted a long-standing and persistent effort to counteract its effects. For example, the development of several of the so called “soil adjusted indices” has pursued this goal, generally addressing both the effect of cover and the results of soil reflectance changing with moisture, texture, or surface roughness [
16,
17]. In this pursuit, the effect of shading was sometimes recognised but usually dismissed or intentionally eluded [
18,
19]. The appearance of high-resolution aerial imagery opened the possibility of fraction segmentation, where the canopy was isolated and other fractions discarded [
20]. Recent research has focused on selecting good techniques for segmentation [
8], and, more recently, on compensating shading instead of eliminating it [
9]. However, these procedures are all dependent on the availability of high-resolution imagery, which viticulturists seldom have frequent access to throughout a season. In contrast, judging by the number of web-based platforms offering such products, there is growing interest to monitor vine evolution with high-revisit satellite imagery, but their resolutions make canopy segmentation impossible. With these, shading-induced variability must be addressed by unmixing.
It is indisputable that the direction of illumination significantly affects the integrated spectral signature of a vineyard trained on VSP, since the values of NDVIsh are considerably different from those of NDVIc and NDVIsun, and the shaded soil fraction varies substantially according to both SELV and RELAZ. As the results show, these factors exert independent effects on NDVIint, although, within the conditions of this study, where data were collected at one site over a period of only two days, their complete correlation does not allow their separate contributions to be fully settled. Nonetheless, ANOVA results show RELAZ will drive NDVIint independently of SELV, thus confirming that RowOr plays a significant role in the integrated VSP spectral signal.
As the orientation approaches that of the solar path, the overall effect of shading variability decreases, the main driving factor (SELV or RELAZ) changes, and the precision with which they may be used to predict the shaded and sunlit fractions decreases. The differences found may be attributed to canopy geometry as well as structure. A VSP with N-S orientation will determine a greater variation in shading than one with an E-W orientation, which would lead to higher precisions in predicting the effect of shading from data obtained in field studies. In addition, although the common view holds that a VSP acts as a regular hedge or screen, the results obtained here challenge this view.
The effect of BDRF was discarded after testing for its presence with the full data set obtained, and the assumption of linearity required for unmixing was confirmed with the simple test illustrated in
Figure 3.
The determination of canopy values by unmixing requires either prior knowledge of some of the element values and the factors that may affect them (e.g., canopy height, row spacing), and some form of correction of those elements affected by SELV and RELAZ that will take them to a reference illumination condition. Considerations for each element include:
(i) p
c: As previously stated, this element contributes to the greatest share of canopy response variability. Unexpectedly, and despite the accuracy of p
sh and p
sun values derived from SELV and RELAZ, the values for p
c obtained from subtracting these values from a unit area show very low correlation with the measured p
c. Visual inspection of the imagery collected suggests the plausible cause to be the consequence of actual canopy structure and the limited range of the image FOV, which appears as insufficient to adequately capture shading produced by shoots extending sideways or vertically from the main VSP hedgerow.
Figure 4 illustrates that conceiving a VSP as a regular screen is misleading: if it were, in nadir views the shadow contour should be roughly similar to the canopy outline. However, shoots growing at different angles project shadows strongly affected by parallax, and, also, many of these shadows fall outside the image FOV. In addition, it is likely that this shading condition varies along the growth season, as VSPs are usually subjected to tipping to a uniform height before veraison but some shoot elongation, particularly from lateral growth, inevitably continues after that.
Another approach that can be used to obtain pc consists of assuming that when solar azimuth is the same as RowOr, illumination is aligned with the canopy direction and psh is equal to 0, so pc + psun = 1. Then considering NDVIsun can be obtained from winter imagery when the canopy is bare, Expression 1 can be rearranged to allow estimation of pc as follows: pc = (NDVIint − NDVIsun)/(NDVIc − NDVIsun). However, this method would require the terms NDVIint and NDVIc to be obtained at the time solar azimuth is the same as RowOr. Satellites cannot be tasked to accommodate this, and aerial imagery would only be useful should all blocks in the vineyard have the same RowOr and the resulting time of capture ensure absence of hotspots.
p
c dominates the canopy fraction’s contribution to NDVI
int and is, therefore, the term of most importance to obtain an estimation of canopy size. In minimally-pruned vines, canopy size has been shown to depend more on the planimetric ground cover (p
c) than the LAI [
6]. Logarithmic regressions of vine VSP LAI against VIs show that sensitivity drops drastically with LAI values above 1 [
7], which may explain this finding. In VSPs, where canopies are constrained by wires or Grenbiule hail-protection netting, the relative importance of ground cover is likely to be less, and influence of NDVI
c correspondingly more, but results here point to the overwhelming influence of p
c on the final value of the canopy fraction. If the inaccuracies stemming from the estimations of shading previously cited can be overcome as suggested, it seems likely that a useful estimation of p
c may be obtained using p
c = 1 − p
sh − p
sun.
(ii) p
sun and p
sh: Considering p
c is independent of the direction of illumination, these two elements are complementary, so for any given vineyard arrangement one may be calculated from the other. The CV of the fraction proportions, as well as their relative contribution to the prediction of the canopy fraction as evidenced by their regression parameter coefficients, show their weight to be prevalent over fraction spectral signature. Both p
sh and p
sun have been shown to be strongly affected by the angle of light incidence, so their effect may be expected to generate greater differences in NDVI
int than the variation of their respective fraction NDVIs. However, the range of variation of p
sh in Block1 is approximately twice that in Block9. This difference may be attributed to the RowOrs. Block 1 is aligned close to the N-S direction so roughly orthogonal to the solar path. In contrast, Block9 is aligned in NW-SE direction, so changes in Solar Azimuth, and even SELV, will have considerably less effect on p
sh variation. In addition, as can be clearly observed in
Figure 4, shoots extending to the sides of the VSP, outside the trellis constraints, will cast shadows even at solar noon. Moreover, these may lie outside the FOV of the image captured and cause p
sh to be only loosely associated with p
c at this study’s scale and sample size. An improvement to test their association requires a much larger FOV and an important extension of the area imaged, as might be obtained from gathering the data from a full block, high-resolution mosaic.
(iii) NDVI
c: NDVI
c has been shown to be an adequate estimator of LAI [
7]. However, the lack of sensitivity of NDVI
c to changes in LAI for many crop canopies, including vines, is a well-established fact [
7], so the results obtained here may differ in sparsely leaved vines, or early in the growing season, as under such conditions the direct influence of NDVI
c on NDVI
sh and even p
sh may become significant. Moreover, very sparsely leaved canopies may not exhibit a linear LAI-NDVI relationship, thus violating the assumption of linearity underlying in Equation (1). For the conditions in this study, however, results obtained highlight the possibility of obtaining good estimates for NDVI
c directly from NDVI
int and illumination angles for specific vineyard conditions, which enables the development and use of similar functions for management of individual blocks or vineyards.
(iv) NDVI
sun: For VSPs with no cover crops, NDVI
sun can be obtained from winter imagery, in the absence of vine canopy. In arid regions such as Mendoza, where this study was conducted, VSPs are universally drip-irrigated along the planted row, so variations arising from differences in soil moisture may be discarded. In addition, both correlation coefficients (
Table 3) and DPCs (
Table 5) show no effect of illumination angles on NDVI
sun, indicating that changes in the time of year for its determination will not lead to differences in its value.
(v) NDVI
sh: The DPC value of NDVI
sh on NDVI
int is much higher than that of the NDVI of the other fractions. Considering shading raises the NDVI value of the soil fraction by around 50%, as can be seen in
Table 1, the combination of this variation with changes in p
sh induced by different illumination angles can be seen to be the most important cause of variation in integrated NDVI response, above those of canopy or sunlit soil. Both p
sh and NDVI
sh show the highest CV amongst all variables, including SELV and RELAZ, which suggests they are affected by additional factors, aside from direction of illumination, perhaps associated with canopy structure irregularities (porosity). However, this may affect p
sh primarily, as results also show there appears to be no discernible influence of the illumination angles on NDVI
sh. The results confirm that the final value of NDVI
sh is driven primarily by the soil spectral signature, at least for the canopy densities found in the studied VSPs, leaving p
sh as the main cause of NDVI
int variations induced by changes in the direction of illumination.