Assessment of Quality in Antimicrobial Calcium Phosphate Research (AQUACAP): A Systematic Review
Abstract
:1. Introduction
- To develop a novel checklist for assessing essential quality items of preclinical studies on antimicrobial ion-substituted CaPs by a panel of subject matter experts.
- Using this checklist to assess the quality of existing literature and identify areas for improvement.
2. Materials and Methods
2.1. Design of the Checklist
- Use and reporting of positive and negative control groups.
- Material characterisation, especially phase characterisation and elemental analysis.
- Reproducibility and validity of the antimicrobial tests.
- Reporting and discussion of the results of antimicrobial tests.
- Use of replicate experiments and statistics.
- Testing of material toxicity.
- Rationales for experiment design choices.
2.2. Implementation of the Checklist
2.3. Statistical Analysis
3. Results
3.1. Design of the Checklist
3.2. Implementation of the Checklist
- The reporting of the starting number of microorganisms;
- Reporting the antimicrobial test results on a logarithmic scale;
- Reporting a rationale for the chosen microorganisms.
- Reporting of negative control groups;
- Material characterisation using X-ray diffraction (XRD);
- Material characterisation using other methods;
- Reporting the used microbial species.
- Reporting rationales for the design of antimicrobial tests;
- Reporting a measure of variance for the antimicrobial test results;
- Discussing the clinical relevance of the reported results.
- Testing the elemental composition of the material;
- Testing for ion release;
- Performing more replicate experiments;
- Testing for material toxicity.
3.3. Statistical Analysis
4. Discussion
4.1. Areas of Improvement in Reporting Quality
4.2. Areas of Improvement in Methodological Quality
4.3. Analysis of Quality Versus Study Age and Citations
4.4. Limitations & Strengths
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
CaP | calcium phosphate |
XRD | X-ray diffraction |
FTIR | Fourier-transform infrared spectroscopy |
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Reporting quality items |
Use and reporting of positive and negative control groups |
1. How were negative control groups reported for the antimicrobial experiment? |
Material characterisation |
2. Was material phase purity (by XRD) adequately reported? |
3. Were the results of other characterisation methods adequately reported? |
Reproducibility and validity of the antimicrobial tests |
4. Were all antimicrobial experiments and material characterisations that were described in the method also reported in the results? |
5. Was there a study protocol? |
6. Was the bacterial species reported? |
7. Was the bacterial strain reported? |
8. Was the bacterial challenge dose (starting inoculum) reported? |
9. Was the amount of sample (e.g., mg/mL of powder or coating surface area) used reported in enough detail to reproduce the experiment? |
10. Are other conditions used for antimicrobial tests reported in a reproducible manner? |
Reporting and discussion of the results of antimicrobial tests |
11. Were the results of antimicrobial tests reported in a readable manner? |
12. Was bacterial enumeration reported on a logarithmic scale? |
13. Was the clinical relevance of the observed antimicrobial effect discussed in relation to a desired outcome? |
Use of replicate experiments and statistics |
14. Was there clear reporting of the number of technical/biological replicates of the antimicrobial tests? |
15. Was there a measure of variance adequately reported for of the antimicrobial tests? |
16. Were the applied statistics for the antimicrobial tests appropriately described? |
Rationales for experiment design choices |
17. Was a clear clinical rationale provided for the chosen material formulation? |
18. Was a rationale provided for the clinical relevance of the used microorganisms? |
19. Was a clear rationale for the chosen antibacterial test method provided? |
20. Was a bacterial killing mechanism proposed and substantiated? |
Methodological quality items |
Use and reporting of positive and negative control groups |
1. Was an appropriate negative control group used? |
2. Was an appropriate positive control group used? |
Material characterisation |
3. What was the formulation of the antimicrobial material? |
4. Was the material phase purity determined? |
5. Were materials characterised using other methods as well? |
6. Was the release of antimicrobial agents from the material investigated? |
7. Did the authors quantify the elemental composition of the antimicrobial product? |
Reproducibility and validity of the antimicrobial tests |
8. Was the antimicrobial experiment performed on planktonic or surface-adherent bacteria? |
9. Were multiple species of microorganisms used for the antimicrobial studies? |
Use of replicate experiments and statistics |
10. How many replicate experiments were performed? |
Testing of material toxicity |
11. How was the (non-)toxicity of the materials tested? |
Reporting Quality Item | Answers (Score) | Results N (%) |
---|---|---|
Use and reporting of positive and negative control groups | ||
1. How were negative control groups reported for the antimicrobial experiment? | A—Not reported/reported in method only (0) B—Results reported as relative versus negative control (1) C—Test samples and controls reported separately (2) | 1 (2%) 4 (7%) 53 (91%) |
Material characterisation | ||
2. Was material phase purity (by XRD) adequately reported? | A—No XRD results were reported (0) B—XRD was performed, but the pattern(s) not reported (0) C—XRD patterns were provided, but not discussed (1) D—the XRD patterns were reported and discussed (2) | 7 (12%) 1 (2%) 0 (0%) 50 (86%) |
3. Were the results of other characterisation methods adequately reported? | A—No other characterisation results were reported (0) B—Other characterisation was performed, but the results are not shown (0) C—The results of other characterisation were reported but not discussed (1) D—The results of other characterisations were reported and discussed (2) | 2 (3%) 1 (2%) 0 (0%) 55 (95%) |
Reproducibility and validity of the antimicrobial tests | ||
4. Were all antimicrobial experiments and material characterisations that were described in the method also reported in the results? | A—Not all performed experiments described in the method are reported in the results or vice versa (0) B—Some tests were only performed on a selection of the materials (1) C—All data are present and accounted for (2) | 13 (22%) 25 (43%) 20 (34%) |
5. Was there a study protocol? | A—No (0) B—Yes (1) | 58 (100%) 0 (0%) |
6. Was the bacterial species reported? | A—No (0) B—Yes (1) | 0 (0%) 58 (100%) |
7. Was the bacterial strain reported? | A—No (0) B—Yes (1) | 25 (43%) 33 (57%) |
8. Was the bacterial challenge dose (starting inoculum) reported? | A—No (0) B—Yes (1) | 23 (40%) 35 (60) |
9. Was the amount of sample (e.g., mg/mL of powder or coating surface area) used reported in enough detail to reproduce the experiment? | A—No (0) B—Yes (1) | 22 (38%) 36 (62%) |
10. Are other conditions used for antimicrobial tests reported in a reproducible manner? | A—Experimental conditions are not reported in a reproducible manner (0) B—Test were carried out according to a referenced procedure (1) C—The experiment is reported in sufficient detail that the experiment can be reproduced (2) | 8 (14%) 7 (12%) 43 (74%) |
Reporting and discussion of the results of antimicrobial tests | ||
11. Were the results of antimicrobial tests reported in a readable manner? | A—Data are unintelligible (e.g., 3D graphs) (0) B—Results are reported as images (1) C—Results reported quantitatively (tables, annotated graphs or written text) (2) | 0 (0%) 37 (64%) 21 (36%) |
12. Was bacterial enumeration reported on a logarithmic scale? | A—No bacteria count was performed (0) B—Enumeration was reported on a linear scale (1) C—Enumeration was performed on a logarithmic scale (2) | 23 (40%) 22 (38%) 13 (22%) |
13. Was the clinical relevance of the observed antimicrobial effect discussed in relation to a desired outcome? | A—No (0) B –Results were compared to those of other studies (1) C—The relevance of the antimicrobial results were discussed in relation to a desired outcome (2) D—The study reports that no consensus exists on the desired outcome (2) | 49 (84%) 5 (9%) 3 (5%) 1 (2%) |
Use of replicate experiments and statistics | ||
14. Was there clear reporting of the number of technical/biological replicates of the antimicrobial tests? | A—There are error bars, but the number of replicate experiments was not reported (0) B—There is no reporting of replicates (1) C—It is reported that there are replicates, but it is not clear if they are technical or biological replicates (1) D—The number of replicates is reported, and it is clear if they are technical or biological replicates (2) | 0 (0%) 13 (22%) 9 (16%) 36 (62%) |
15. Was there a measure of variance adequately reported for of the antimicrobial tests? | A—It is reported that there are replicate experiments, but only the mean outcome is reported (0) B—Variance is reported, but it is unclear what measure of uncertainty they represent (0) C—There is a measure of variance, and it is clear what it represents (1) D—There is no evidence of replicate experiments, and no measure of variance is provided (1) E—There are replicate measurements, and all raw data are available (2) | 14 (24%) 11 (19%) 21 (36%) 12 (21%) 0 (0%) |
16. Were the applied statistics for the antimicrobial tests appropriately described? | A—No statistics were applied, or results were not reported (0) B—Statistical values are used (e.g., p-values), but it is unclear by which method they were obtained (0) C—Statistical methods were applied, and it is clear which ones (1) | 35 (60%) 4 (7%) 19 (33%) |
Rationales for experiment design choices | ||
17. Was a clear clinical rationale provided for the chosen material formulation? | A—No (0) B—Yes (1) | 45 (78%) 13 (22%) |
18. Was a rationale provided for the clinical relevance of the used microorganisms? | A—No rationale was provided (0) B—A rationale was provided other than clinical (e.g., to cover Gram+ and Gram-) (1) C—A clinical rationale was provided (2) | 22 (38%) 15 (26%) 21 (36%) |
19. Was a clear rationale for the chosen antibacterial test method provided? | A—No (0) B—Yes (1) | 54 (93%) 4 (7%) |
20. Was a bacterial killing mechanism proposed and substantiated? | A—No killing mechanism was proposed (0) B—A theoretical killing mechanism was proposed but not substantiated (0) C—A theoretical killing mechanism was proposed based on references to literature (1) D—A killing mechanism was proposed and substantiated based on experimental evidence (2) | 16 (28%) 8 (14%) 32 (55%) 2 (3%) |
Reporting Quality | Methodological Quality | |||
---|---|---|---|---|
Slope | 95% CI | Slope | 95% CI | |
Study age | 0.09 | −0.11–0.29 | −0.09 | −0.24–0.07 |
Citation rate | 0.02 | −0.13–0.16 | 0.14 | 0.03–0.25 |
Methodological Quality Item | Answers (Score) | Results N (%) |
---|---|---|
Use and reporting of positive and negative control groups | ||
1. Was an appropriate negative control group used? | A—No negative control was used/unclear negative control (0) B—A blank group was used as negative control (e.g., empty culture well) (1) C—A CaP material without antimicrobial effect was used as negative control (2) D—A different clinically relevant negative control was used (e.g., uncoated titanium or bone graft) (2) | 3 (5%) 4 (7%) 49 (84%) 2 (3%) |
2. Was an appropriate positive control group used? | A—No positive control was used (0) B—Antibiotics were used as a positive control group (1) C—A different positive control was used (1) | 49 (84%) 7 (12%) 2 (3%) |
Material characterisation | ||
3. What was the formulation of the antimicrobial material? | A—(Nano)powder (0) B—Coating (1) C—Pure CaP scaffold (1) D—Composite particles (1) E—Composite scaffold (1) F—Cement (1) G—Powders pressed into pellets or disks (0) | 30 (52%) 13 (22%) 1 (2%) 0 (0%) 1 (2%) 1 (2%) 12 (21%) |
4. Was the material phase purity determined? | A—No (0) B—Yes (1) | 7 (12%) 51 (88%) |
5. Were materials characterised using other methods as well? | A—No (0) B—Yes (1) | 3 (5%) 55 (95%) |
6. Was the release of antimicrobial agents from the material investigated? | A—No (0) B—Yes, by disk diffusion (1) C—Yes, by a specialised method (2) | 27 (47%) 14 (24%) 17 (29%) |
7. Did the authors quantify the elemental composition of the antimicrobial product? | A—There is no measure of the final product composition (0) B—The final composition is calculated based on the starting materials (0) C—The presence of the antimicrobial ion is confirmed (e.g., by XPS) but not quantified (1) D—An appropriate method has been used to measure the elemental composition, e.g., ICP-MS (2) E—The composition is determined indirectly, e.g., by Rietveld refinement (2) | 6 (10%) 6 (10%) 10 (17%) 35 (60%) 1 (2%) |
Reproducibility and validity of the antimicrobial tests | ||
8. Was the antimicrobial experiment performed on planktonic or surface-adherent bacteria? | A—Unclear if planktonic or adherent bacteria were measured (0) B—The antimicrobial assay was performed on planktonic bacteria (1) C—The antimicrobial assay was performed on surface-adherent bacteria (1) D—Both planktonic and surface-adherent bacteria were tested (2) | 6 (10%) 42 (72%) 5 (9%) 5 (9%) |
9. Were multiple species of microorganisms used for the antimicrobial studies? | A—Only 1 strain (0) B—Multiple strains with only 1 group (G−, G+ etc) (0) C—G+ and G− (1) D—G− or G+, and yeast (1) E—G+, and G−, and yeast (2) | 9 (16%) 2 (3%) 36 (62%) 1 (2%) 10 (17%) |
Use of replicate experiments and statistics | ||
10. How many replicate experiments were performed? | A—No replicates were performed or replicates were not reported (0) B—N = 2 (0) C—N ≥ 3 (1) D—N ≥ 9 (2) | 16 (28%) 2 (3%) 40 (69%) 0 (0%) |
Testing of material toxicity | ||
11. How was the (non-)toxicity of the materials tested? | A—No toxicity test was performed (0) B—Reference to a different study that rationalises why the current materials are or are not toxic (1) C—The study assessed a single measure of cell toxicity of the materials (1) D—The study assessed multiple of cellular/in vivo responses to the materials (2) | 22 (38%) 3 (5%) 15 (26%) 18 (31%) |
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Kamphof, R.; Arts, J.; Cama, G.; Nelissen, R.; Pijls, B. Assessment of Quality in Antimicrobial Calcium Phosphate Research (AQUACAP): A Systematic Review. Materials 2025, 18, 1543. https://doi.org/10.3390/ma18071543
Kamphof R, Arts J, Cama G, Nelissen R, Pijls B. Assessment of Quality in Antimicrobial Calcium Phosphate Research (AQUACAP): A Systematic Review. Materials. 2025; 18(7):1543. https://doi.org/10.3390/ma18071543
Chicago/Turabian StyleKamphof, Robert, Jacobus Arts, Giuseppe Cama, Rob Nelissen, and Bart Pijls. 2025. "Assessment of Quality in Antimicrobial Calcium Phosphate Research (AQUACAP): A Systematic Review" Materials 18, no. 7: 1543. https://doi.org/10.3390/ma18071543
APA StyleKamphof, R., Arts, J., Cama, G., Nelissen, R., & Pijls, B. (2025). Assessment of Quality in Antimicrobial Calcium Phosphate Research (AQUACAP): A Systematic Review. Materials, 18(7), 1543. https://doi.org/10.3390/ma18071543