Evaluating the CRP Interactome: Insights into Possible Novel Roles in Cellular Signaling and Tumorigenicity
Abstract
1. Introduction
2. The Updated C-Reactive Protein Interactome
3. Potential Pathways Regulated by C-Reactive Protein
4. Possible Impact of C-Reactive Protein on Glycosylation of Proteins and Lipids in Cancer
4.1. Glycoproteins and the Role of Glycosaminoglycan Biosynthesis
4.2. Heparan Sulfate
4.3. Keratan Sulfate
4.4. Chondroitin Sulfate
4.5. Glycosphingolipids
5. Expanding on the Interactions of C-Reactive Protein with ECM–Receptor Signaling
6. Novel Insights into Other Cancer-Related Processes Potentially Modulated by C-Reactive Protein
6.1. TGFβ1 Signaling Pathway
6.2. Epithelial-to-Mesenchymal Transition
6.3. Aerobic Glycolysis
6.4. Tumor Hypoxia
7. Concluding Remarks
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Conflicts of Interest
Abbreviations
| AGE | Advanced Glycosylated End-Product |
| AP-MS | Affinity Purification Mass Spectroscopy |
| C1q | Complement Component 1q |
| CRP | C-Reactive Protein |
| CS | Chondroitin Sulfate |
| CSPG | Chondroitin Sulfate Proteoglycans |
| ECM | Extracellular Matrix |
| EMT | Epithelial–Mesenchymal Transition |
| HS | Heparan Sulfate |
| HSPG | Heparan Sulfate Proteoglycans |
| IL-6 | Interleukin 6 |
| IL-1β | Interleukin 1-beta |
| KS | Keratan Sulfate |
| KSPG | Keratan Sulfate Proteoglycans |
| GAG | Glycosaminoglycan |
| mCRP | Monomeric C-Reactive Protein |
| MET | Mesenchymal–Epithelial Transition |
| ORF | Open Reading Frame |
| pCRP | Pentameric C-Reactive Protein |
| pCRP* | Modified Pentameric C-Reactive Protein |
| PPI | Protein–Protein Interactions |
| SM | Sphingomyelin |
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| KEGG Legacy Pathways | # Genes in Overlap (k) | FDR q-Value | CRP PPIs |
|---|---|---|---|
| ECM–Receptor Interaction | 9 | 3.65 × 10−12 | AGRN, COL4A2, FN1, LAMA1, LAMA5, LAMB1, LAMB2, LAMC1, LAMC3 |
| Pathways in Cancer | 12 | 2.54 × 10−11 | BMP4, COL4A2, FN1, LAMA1, LAMA5, LAMB1, LAMB2, LAMC1, LAMC3, MAPK1, MAPK3, TGFB1 |
| Focal Adhesion | 10 | 7.29 × 10−11 | COL4A2, FN1, LAMA1, LAMA5, LAMB1, LAMB2, LAMC1, LAMC3, MAPK1, MAPK3 |
| Small-Cell Lung Cancer | 8 | 7.29 × 10−11 | COL4A2, FN1, LAMA5, LAMB1, LAMB2, LAMC1, LAMC3, LAMA1 |
| GAG Biosynthesis—Heparan Sulfate | 5 | 2.66 × 10−8 | B4GALT7, EXT1, HS3ST1, HS6ST1, NDST2 |
| Prion Diseases | 5 | 1.08 × 10−7 | C1QA, HSPA5, LAMC1, MAPK1, MAPK3 |
| GAG Biosynthesis—Keratan Sulfate | 4 | 2.54 × 10−7 | B4GALT1, B4GALT3, B4GALT4, CHST6 |
| GAG Biosynthesis—Chondroitin Sulfate | 4 | 1.18 × 10−6 | B4GALT7, CHST3, CHST12, CHST14 |
| Glycosphingolipid Biosynthesis | 4 | 2.13 × 10−6 | B4GALT1, B4GALT3, B4GALT4, ST3GAL4 |
| TGFβ Signaling Pathway | 4 | 2.53 × 10−4 | BMP4, MAPK1, MAPK3, TGFB1 |
| Signaling Pathway | Gene | Function |
|---|---|---|
| Glycosaminoglycan and | B4GALT1 | Transfer of galactose to GlcNAc residues in glycoproteins, required for saccharide structuring and initiation for glycosaminoglycan synthesis |
| Glycosphingolipid | B4GALT3 | |
| Biosynthesis | B4GALT4 | |
| CHST3 | Catalyzes sulfation of Chondroitin Sulfate GalNAc residues at position 6 | |
| CHST6 | Catalyzes sulfation of Keratan Sulfate GlcNAc residues | |
| CHST12 | Catalyzes sulfation of Chondroitin Sulfate GalNAc residues | |
| CHST14 | Catalyzes sulfation of Dermatan Sulfate GalNAc residues | |
| EXT1 | Required for chain elongation of Heparan Sulfate glycan backbone | |
| HS3ST1 | Catalyzes sulfation of Heparan Sulfate GlcNAc residues at position 3; rate limiting | |
| HS6ST1 | Catalyzes sulfation of Heparan Sulfate GlcNS residues at position 6 | |
| NDST2 | Catalyzes N-deacetylation and N-sulfation of Heparan Sulfate GlcNAc | |
| ST3GAL4 | Catalyzes sialylation of glycoproteins and glycolipids important for cell adhesion | |
| ECM–Receptor Signaling | AGRN | Heparan Sulfate glycoprotein involved in cholinergic receptor and cell–cell signaling |
| COL4A2 | Major structural component of ECM making up the basement membrane | |
| FN1 | Binds various ECM glycoproteins to regulate cell cytoskeleton, adhesion, and motility | |
| LAMA1 | Subunits of laminins (alpha, beta, gamma) Major glycoproteins of ECM involved in cell adhesion and motility Directly interact with multiple types of integrins for cell–cell signaling May directly bind glycosphingolipids to alter ceramide-derivative signaling Implicated in EMT and metastatic processes | |
| LAMA5 | ||
| LAMB1 | ||
| LAMB2 | ||
| LAMC1 | ||
| LAMC3 |
| Signaling Pathway | Gene | Function |
|---|---|---|
| TGFβ Signaling Pathway | BMP4 | Ligand for TGFβ receptors that regulates SMAD signaling |
| MAPK1 | ERK2 kinase involved in cell proliferation, adhesion, motility, and survival | |
| MAPK3 | ERK1 kinase involved in cell proliferation, adhesion, motility, and survival | |
| TGFB1 | Major growth factor involved in MAPK and SMAD signaling associated with cell proliferation, differentiation, adhesion, motility; regulates immune cell function | |
| Epithelial–Mesenchymal Transition | COL4A2 | Major structural component of ECM making up the basement membrane |
| FN1 | Binds various ECM glycoproteins to regulate cell cytoskeleton, adhesion, and motility | |
| LAMA1 | Alpha and gamma subunits of laminin involved in cell–cell signaling with integrins associated with cell proliferation, differentiation, adhesion, and motility | |
| LAMC1 | ||
| QSOX | Required for the incorporation of laminins into the extracellular matrix | |
| TGFB1 | Major growth factor involved in MAPK and SMAD signaling associated with cell proliferation, differentiation, adhesion, motility; regulates immune cell function | |
| TIMP3 | Inhibits matrix metalloproteinases (e.g., MMP2) to prevent ECM degradation; activity is associated with tumor suppression |
| Signaling Pathway | Gene | Function |
|---|---|---|
| Glycolysis | AGRN | Heparan Sulfate glycoprotein involved in cholinergic receptor and cell–cell signaling |
| B4GALT1 | Transfer of galactose to GlcNAc residues in glycoproteins, required for saccharide structuring and initiation for glycosaminoglycan synthesis | |
| B4GALT4 | ||
| B4GALT7 | ||
| CHST6 | Catalyzes sulfation of Keratan Sulfate GlcNAc residues | |
| CHST12 | Catalyzes sulfation of Chondroitin Sulfate GalNAc residues | |
| EXT1 | Required for chain elongation of Heparan Sulfate glycan backbone | |
| HSPA5 | Chaperone involved in protein folding and assembly; may regulate unfolded protein response | |
| GMPPA | Synthesis of GDP-mannose for N-linked oligosaccharides | |
| IDUA | Catalyzes hydrolysis of Heparan Sulfate and Dermatan Sulfate | |
| QSOX1 | Required for the incorporation of laminins into the extracellular matrix | |
| STC2 | Involved in cellular calcium and phosphate homeostasis | |
| Hypoxia | CHST3 | Catalyzes sulfation of Chondroitin Sulfate GalNAc residues at position 6 |
| HS3ST1 | Catalyzes sulfation of Heparan Sulfate GlcNAc residues at position 3; rate limiting | |
| HSP5 | Chaperone involved in protein folding and assembly; may regulate unfolded protein response | |
| EXT1 | Required for chain elongation of Heparan Sulfate glycan backbone | |
| NDST2 | Catalyzes N-deacetylation and N-sulfation of Heparan Sulfate GlcNAc | |
| STC2 | Involved in cellular calcium and phosphate homeostasis |
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Gerhardt, A.; Nanakaliy, D.; Shah, H.D.; Sarfaraz, S.; Madigan, C.; Downing, M.; Elliott, R.P.; Dipto, R.; Vrapciu, B.; Noetzel, J.W.; et al. Evaluating the CRP Interactome: Insights into Possible Novel Roles in Cellular Signaling and Tumorigenicity. Curr. Issues Mol. Biol. 2025, 47, 1003. https://doi.org/10.3390/cimb47121003
Gerhardt A, Nanakaliy D, Shah HD, Sarfaraz S, Madigan C, Downing M, Elliott RP, Dipto R, Vrapciu B, Noetzel JW, et al. Evaluating the CRP Interactome: Insights into Possible Novel Roles in Cellular Signaling and Tumorigenicity. Current Issues in Molecular Biology. 2025; 47(12):1003. https://doi.org/10.3390/cimb47121003
Chicago/Turabian StyleGerhardt, Alison, Dlen Nanakaliy, Harnish D. Shah, Syed Sarfaraz, Charlotte Madigan, Makenna Downing, Robert P. Elliott, Rafid Dipto, Bella Vrapciu, Joseph W. Noetzel, and et al. 2025. "Evaluating the CRP Interactome: Insights into Possible Novel Roles in Cellular Signaling and Tumorigenicity" Current Issues in Molecular Biology 47, no. 12: 1003. https://doi.org/10.3390/cimb47121003
APA StyleGerhardt, A., Nanakaliy, D., Shah, H. D., Sarfaraz, S., Madigan, C., Downing, M., Elliott, R. P., Dipto, R., Vrapciu, B., Noetzel, J. W., Armas, J., Ahmed, A., Potempa, M., Olson, M. E., Potempa, L. A., & Hart, P. C. (2025). Evaluating the CRP Interactome: Insights into Possible Novel Roles in Cellular Signaling and Tumorigenicity. Current Issues in Molecular Biology, 47(12), 1003. https://doi.org/10.3390/cimb47121003

