1. Introduction
Rapid and reliable biodiversity assessment has become an increasingly urgent mission in the context of global environmental change [
1,
2]. Despite their accuracy, traditional large-scale field surveys incur substantial temporal and financial expenditures as well as have inherent observer bias [
1,
2,
3,
4]. In recent years, passive acoustic monitoring (PAM) offers a promising alternative for long-term and large-scale biodiversity assessment [
5,
6]. By continuously recording soundscapes, PAM enables automated and non-invasive observation of wildlife activities across large spatial and temporal scales [
2,
3,
4], facilitating comprehensive ecological monitoring.
With the PAM framework, acoustic indices have attracted increasing attention due to their potential for rapid biodiversity assessment (RBA) [
1,
3,
4]. These indices summarize recordings and characterize ecosystems efficiently. It is worth noting that this approach shifts the focus from species-level identification to holistic rapid assessments of acoustic communities, focusing on scenarios involving multiple bird species. However, their practical application faces significant challenges, as existing acoustic indices are significantly affected by noise [
3,
4,
7,
8]. This limitation is particularly critical in human-dominated soundscapes, such as urban–rural areas. With the growing demand for comprehensive environmental monitoring [
9], RBA is gradually expanding to complex soundscapes dominated by anthropogenic and geophonic sounds. These non-biotic signals overlap with biotic sounds in both time and frequency, leading to biased or even controversial ecological interpretations among different studies [
8]. For clarity and ease of preprocessing, we terminologically classify anthropogenic sounds as interference due to their deterministic nature and spatio-temporal correlation. In contrast, geophonic sounds from wind and rain, along with other spatial uncorrelated additive noise in recordings, are still termed noise.
Conventional preprocessing for acoustic indices relies on high-pass filtering to remove low-frequency components [
1,
7,
10,
11]. This strategy inherently assumes spectral separability between non-biotic and biotic sounds, an assumption that fails in urban–rural soundscapes where the broadband interference overlaps with biotic signals in frequency. For example, the conventional acoustic diversity index (ADI [
12]) uses a single dBFS threshold across the entire time–frequency (TF) space in analysis. Previous studies have shown that the high-pass filter alone cannot suppress the adverse impact of non-biotic sound on ADI [
4,
10,
11]. Recently, the frequency-dependent ADI (FADI) variant [
4] was proposed, in which floating thresholds adapted to the noise level at each frequency bin were employed, with the single dBFS threshold of ADI serving as the lower limit. This design introduced an individualized detection threshold for each frequency bin based on its narrowband noise level, which can effectively filter out much of the temporally steady noise and interference. However, the local signal-to-interference-plus-noise ratio (SINR) is often quite low in interference-concentrated frequency bands, where the biotic sound TF points masked by interference cannot pass the threshold detection, resulting in distorted FADI results [
13]. Clearly, existing single-channel noise suppression methods, including both high-pass filter preprocessing or frequency-dependent threshold detection, cannot guarantee reliable applications of ADI and its variants in the presence of strong interferences. The adoption of microphone array processing technology with multi-channel spatial filtering capabilities [
14,
15,
16,
17,
18,
19] represents a necessary evolution.
In RBA applications, the deployment of acoustic recording devices is carefully selected to maximize the bird sounds and minimize the impact of anthropogenic interference on index calculations. Even in urban–rural areas where anthropogenic noise is unavoidable, devices are deployed at locations away from human activity zones that are characterized by relatively single-source interference direction. In such cases, although the field audio recordings include both avian vocalizations and anthropogenic interferences, the recordings contain at most a single dominant interference. Therefore, this paper does not consider complex scenarios with multiple dispersed interferences. For moving interferences in the area, their angular variation range is typically limited to a relatively narrow sector due to their remote distance from the recording device.
Figure 1 illustrates a typical geometric relationship of biodiversity monitoring in urban–rural areas, where sounds from agricultural machinery are the typical interferences. These interferers are not continuously active throughout the year; instead, they may operate persistently for several consecutive days, particularly during farming or harvest seasons. During such active periods, the soundscape typically comprises vocalizations from multiple bird species alongside a single directional interference source. Inevitably, acoustic indices will be inaccurate since biotic sounds are masked by the interference. Notably, these interferences exhibit significant spatio-temporal correlation, referred to in this paper as directional interference signals. In this context, the approximate directions of the interferences are either a priori known or readily measurable. Therefore, to achieve continuous monitoring, a microphone array processing strategy with deep interference suppression is required before the index calculation.
However, the calculation of acoustic indices requires capturing avian vocalizations across the entire spatial domain as completely as possible while suppressing interference. This implies that the mainstream microphone array beamforming techniques characterized by directional enhancement of a narrow beam are no longer suitable. Instead, a first-order differential microphone array (FO-DMA) [
20,
21,
22] using two close-spaced microphone sensors is more appropriate for the targeted urban–rural soundscapes characterized by strong but directional interference, because of its unique spatial null filtering response and low-cost, simple implementation. Specifically, its cardioid pattern provides a broad coverage beam with a sharp on-axis null for interference cancellation. In addition, FO-DMA inherently possesses a first-order differentiator frequency response that can suppress low-frequency noise, particularly the impact of equipment self-noise on subsequent exponential calculations.
Since interference directions are either known a priori or tracked in real time via established direction of arrival (DOA) estimation methods [
23,
24,
25,
26,
27], an FO-DMA can theoretically steer its cardioid pattern’s null precisely toward the interference direction by mounting on a turntable setup. Nevertheless, various non-ideal factors (such as DOA estimation errors and sound speed variations) may cause misalignment between the null center and the actual interference direction in practice. Obviously, a fixed cardioid beam cannot ensure the required interference suppression performance for acoustic index applications, necessitating an adaptive FO-DMA algorithm to dynamically adjust its null position to achieve consistent cancellation of directional interference within the rear half-space. Note that combining the two FO-DMA elements can simultaneously form two back-to-back cardioid beams with identical patterns but opposite look directions. If a directional interference has a small offset angle from the null direction of the forward-beam, its residual component in the forward-beam output can be estimated by applying optimal weighting to the newly added backward-beam signal. This estimate is then subtracted from the forward-beam output to make the rear null of the array pattern align with the true interference direction [
28]. However, traditional adaptive null-steering based on FO-DMA, which uses a Wiener filter of length one [
28], can only form frequency-dependent nulls due to the limited system degrees of freedom. As a result, the spatial null aligns with the interference direction solely within the band of peak interference energy, deviating at other frequencies. This lack of the capability for broadband interference cancellation will bias the subsequent index calculation.
Building upon the previous discussion, this paper proposes a novel transferable denoising preprocessing framework to facilitate broader adoption of acoustic indices for biodiversity monitoring in complex urban–rural soundscapes. Leveraging the orthogonality between the noise subspace and the interference subspace, as well as the geometric uncertainty between the noise and signal subspaces, this framework extracts multiple mutually orthogonal eigenvectors from the noise subspace to formulate the multi-tap null-steering beamformer weights for each parallel channel. Each channel can form deep narrow groove along the interference’s spatio-temporal support while exhibiting diverse responses to the target signals. As a result, the framework effectively suppresses interference while preserving target acoustic information to the greatest extent possible through the fusion of multi-channel outputs. Experimental results demonstrate that our proposed method leverages elaborate signal processing stages before index calculation, ensuring numerical robustness of index values under low SINR conditions and complex soundscapes. The primary contributions of this work are as follows:
- (1)
A multi-tap spatio-temporal null-steering beamformer based on the back-to-back FO-DMA structure is proposed, which provides more system degrees of freedom for broadband interference suppression. In contrast to the conventional null-steering beamformer, this multi-tap approach forms the narrow groove in the interference’s spatio-temporal support, significantly enhancing the broadband interference cancellation capability.
- (2)
A bank of mutually orthogonal null-steering beamformers combined with a signal compensation algorithm is proposed to mitigate the self-cancellation of the target signal from the unconstrained filtering process. Compared with the single beamformer scheme, the multi-branch design effectively preserves the desired signal while suppressing interference within a wider SINR range.
- (3)
The two-element FO-DMA employed in our method features a simple structure, compact size, and low complexity. This enables low power, low-cost implementation, making it ideal for large-scale deployment and long-term biodiversity monitoring. Consequently, it can substantially expand the spatio-temporal coverage of acoustic sensing.
The rest of this paper is organized as follows.
Section 2 introduces the proposed denoising preprocessing algorithm. Experimental results using both simulation and real-world recordings are reported in
Section 3.
Section 4 presents further discussions and
Section 5 draws the conclusions.
3. Experiments and Results
This section presents both simulation and real-world experiments to validate the effectiveness of the proposed method.
Section 3.1 illustrates the simulation setup.
Section 3.2 carries out two simulation experiments across factors, including SINR and target signal preservation. The first experiment is performed under varying SINR options with a fixed acoustic diversity condition. The second one operates in different directions of the target signal when the SINR is −10 dB. Finally, a real-world experiment is conducted in
Section 3.3.
To evaluate the performance of the proposed denoising algorithm, we compare the FADI value and its binary spectrogram under different conditions. The standard FADI serves as the baseline without preprocessing. The key performance in preserving the target signal is evaluated by BIC-FADIw, which uses the Wiener–Hopf equation to calculate the filter weights. In contrast, BIC-FADI represents the final output after preprocessing by the complete algorithm illustrated in
Figure 2, demonstrating the overall performance gain achieved with the parallel beamformer structure. Here, to investigate the influence of the number of branches on the target signal preservation, the value of
Q is empirically evaluated ranging from 1 to 5. The resulting indices are referred to as BIC-FADI-
Q (
Q = 1, 2, 3, 4, 5), corresponding to different
Q values.
3.1. Simulation Setup
In the simulation experiments, the two microphones form a linear array with an element spacing of 1.06 cm. Without special mention, the speed of sound
c is 340 m/s, sampling rate
fs = 32 kHz. Since the vocalization frequencies of bird species used in the following experiments are below 12 kHz, we set the maximum frequency for index calculation to 12 kHz to obtain more indicative information in this study. Following the approach in FADI [
4], the STFT is implemented using a Hanning window with a frame length of 100 ms and a 100 ms shift.
= 20 corresponds to a detection probability of 0.9 as well as a false alarm probability of 10
−6, which is the most commonly used option in practical applications [
38]. The parameter settings used in this work are listed in
Table 1.
In this paper, the experimental recording includes biotic sounds (i.e., avian acoustic event) and acoustic background (i.e., interference source and the noise floor). To emulate avian acoustic events, we generate three types of broadband signals with frequency ranges of 1–12 kHz, 0.5–4 kHz, and 5–9 kHz, respectively, each with a duration of 0.1 s, following the proportional distribution of bird sounds observed in real-world recordings. Anthropogenic interference is represented by recordings of aquaculture aerators and agricultural drones, as shown in
Figure 9. Pink noise is used as the noise floor in our experiments, as it represents a fundamental and widespread model of environmental fluctuation across ecological systems [
39,
40].
It is well known that the SINR is calculated by the ratio between the average power of the target signal and interference-plus-noise. In this work, we multiplied the target signal (i.e., the avian acoustic event) power by a factor a1 while maintaining the interference-plus-noise power constant, which would result in the desired SINR. Similarly, the desired interference-to-noise ratio (INR) can be obtained by keeping the noise power constant and multiplying the interference power with the corresponding factor a2. In all simulation experiments, the INR is consistently maintained at 40 dB for each acoustic background. It should be noted that the covariance matrix and cross-correlation vector used in the beamformers are estimated from the interference-plus-noise segments (i.e., the acoustic background) in the experiments described below.
Two simulation experiments are conducted as follows. In the first experiment, each of the two aforementioned interferences is individually overlaid on the pink noise, forming two acoustic backgrounds. For each 1 min acoustic background, 30 acoustic events are individually gain-adjusted and overlaid on it, with each event within every non-overlapping 2 s slot. The first 20 acoustic events are positioned between 0°~90°, and the last 10 are distributed between 150°~180°. The spectrogram of the 1 min target signals used in this experiment is shown in
Figure 10a. The interference sources always occur at 150° within the 1 min experimental recording. The experiment is performed over an SINR range from 40 dB to −30 dB in a step size of 5 dB. It should be emphasized that the sequence of events, the place of each event within every non-overlapping 2 s slot, as well as the spatial direction of each event, are fixed to ensure that SINR remains the sole variable. In other words, the acoustic diversity of biotic sound is theoretically the same across all acoustic backgrounds according to the principle of FADI.
The second experiment uses the 1 min acoustic background containing the aquaculture aerator sound as a case study. Here, 30 acoustic events with a duration of 0.1 s and a frequency distribution of 1~12 kHz are used, as shown in
Figure 10b. They are overlaid on the aforementioned acoustic background within non-overlapping 2 s intervals at a fixed SINR of −10 dB. To investigate the compensation of the target signal in different directions, the events are divided into six consecutive groups of five. The spatial direction of the first group is set to 180°, and this angle is decreased by 10° for each subsequent group, resulting in a systematic coverage of the azimuth range from 180° to 130°. It is noteworthy that the interference source is placed at 150° throughout the recording.
3.2. Simulation Experiment Analysis
3.2.1. The Influence of SINR Variation
Figure 11 presents the comparison of seven indices with varying SINR options under two acoustic backgrounds. In the field of the RBA, for the same acoustic diversity of biotic sound, the effective index should maintain numerical robustness across different acoustic backgrounds and various SINR conditions. It can be observed that compared to the ground truth, extremely small distortion of BIC-FADIw and BIC-FADI family indices (i.e., BIC-FADI-1, BIC-FADI-2, BIC-FADI-3, BIC-FADI-4, and BIC-FADI-5) exists under high SINR conditions. This is because the array signal processing suppresses ten acoustic events near the interference direction. It is worth noting that the minor distortion falls within the acceptable range for ecoacoustic interpretation and does not compromise the validity of conclusions established in the existing literature.
It is obvious that multi-channel denoising preprocessing methods (e.g., BIC-FADIw and BIC-FADI family indices) are superior to the single-channel one (e.g., FADI) when several acoustic backgrounds are considered. Specifically, the multi-channel denoising preprocessing methods provide a significantly robust performance within a wide SINR range from −10 dB to 40 dB. The fundamental reason for this advantage lies in the higher system degrees of freedom provided by the employed multi-tap beamformer, which enables superior broadband interference suppression. As a result, the SINR level can meet the requirements for subsequent FADI calculations.
It is important to highlight that under extremely low SINR conditions (e.g., −30 dB~−20 dB), the BIC-FADI family indices not only outperform the single-channel FADI but also exhibit a slower value degradation than BIC-FADIw. This robustness advantage is rooted in the design of the multi-branch parallel beamformer, which leverages complementary information fusion to preserve avian vocalization details that are typically compromised in unconstrained single filter designs.
For any SINR condition, the values of BIC-FADI-3, BIC-FADI-4, and BIC-FADI-5 in
Figure 11a differ by less than 0.002, while those of BIC-FADI-1~BIC-FADI-5 in
Figure 11b differ by less than 0.1. In summary, BIC-FADI-3, BIC-FADI-4, and BIC-FADI-5 provide similar performance, which implies that
Q = 3 is a suitable choice.
Figure 12 presents a case study under the aquaculture aerator background at −10 dB SINR, providing a definitive verification of our proposed method’s interference suppression capability and the biotic sound preservation performance. Compared with the ground truth in
Figure 12a, many missed detections (corresponding to weak biotic sound-dominated TF points below the threshold) had spread in the binary spectrogram of FADI (
Figure 12b). In contrast, the binary spectrograms of BIC-FADIw (
Figure 12c) and BIC-FADI family (
Figure 12d–f) indices show significantly better preservation of biotic sound than FADI, which implies that the null-steering beamformer successfully improves the SINR of the noisy recordings.
Thanks to the parallel beamformer structure used in BIC-FADI, it achieves an optimal balance between interference suppression and biotic sound information preservation. The performance variation between BIC-FADIw and BIC-FADI family indices is largely due to differences in preserving biotic sounds near the interference direction. In the simulation, the last ten acoustic events between 40 s and 60 s are in the vicinity of the angle of the interference source. A comparison of the distribution of these ten acoustic events in the binary spectrograms reveals distinct behaviors. BIC-FADIw detects biotic sound-dominated TF points mainly concentrated in the 4–8 kHz range (
Figure 12c). In contrast, BIC-FADI-
Q (
Figure 12d–f) not only detects more TF points in the high-frequency range (e.g., 10–12 kHz) but also retains more biotic sound information in the mid-frequency range, such as around 52 s. This advantage enhances the ability of acoustic indices to reflect biotic information in complex environments.
3.2.2. The Performance of Target Signal Preservation
Figure 13 presents the performance of the target signal preservation from BIC-FADIw and three BIC-FADI family indices (i.e., BIC-FADI-1, BIC-FADI-3, and BIC-FADI-5) under the aquaculture aerator background when SINR = −10 dB. In this experiment, acoustic events from 0 to 10 s are located at 180°, those from 10 to 20 s at 170°, and so on. Accordingly, the acoustic events from 30 to 40 s correspond to biotic sounds arriving from the same direction as the interference source (i.e., 150°). For BIC-FADIw, when the biotic sounds arrive from directions ranging between 180° and 150°, many TF points corresponding to biotic sounds in high-frequency are missed, with the most severe missed detections observed at 150°. As for BIC-FADI-
Q, although
Q = 1 also leads to many missed detections in the high-frequency range (
Figure 13b), increasing
Q enables complementary contributions from different parallel branches. Consequently, the TF points corresponding to biotic sounds from directions away from the interference source (e.g., 180°, 170°, and 130°) are effectively preserved (
Figure 13 c,d). Moreover, the number of the biotic sound-dominated TF points near the interference source (140° and 160°) increases significantly. Even for the interference direction (150°), the TF points associated with biotic sounds in the low-frequency range (below 4 kHz) and high-frequency range (above 10 kHz) are also preserved to some extent. The results indicate that biotic sounds originating from 130° to 180° (except the 150° interference direction) are suppressed in BIC-FADIw but are preserved in the BIC-FADI-
Q indices. This implies that our proposed parallel beamformer structure effectively reduces the self-cancellation of the target signal, especially for biotic sounds near the interference direction.
While the amount of preserved acoustic information generally increases with the value of
Q, the performance plateaus beyond
Q = 3 in this experiment, which is consistent with the results shown in
Figure 11. At this value, the acoustic information is already retained with relative completeness. Consequently, any further increase in
Q fails to yield a significant performance gain, only introducing a higher computational burden. This conclusion provides critical insight into the numerical relationship between the interference subspace dimension
and the filter length
. The saturation of performance at
Q = 3 suggests an optimal operational point. Specifically, it implies that setting the filter length to be at least five taps greater than the estimated interference subspace dimension (i.e.,
) is a prudent design rule. This rule ensures that the smallest three eigenvectors can be reliably attributed to the noise subspace, thereby reducing the probability of false alarms arising from residual interference components.
3.3. The Real-World Experiment
In the real-world experiment, a custom-made two-element acoustic recording device, consisting of two microphone sensors spaced 1.4 cm apart, was placed near the pond as shown in
Figure 14. Specifically, the microphones (Model: 378C20) and signal conditioning circuit (Model: UA326Hi) were deployed accordingly. The geometry of the real-world experiment is illustrated in
Supplementary Figure S1. The distances of all sources were measured by a laser rangefinder, and their azimuth angles were obtained through prior measurements using a theodolite. Here, an acoustic background with two aquaculture aerators was selected, with respective angles of 178° and 183° relative to the microphone array axis, and distances of 79 m and 109 m from the array. The aerators were continuously operated, and the spectrogram and normalized power spectrum of this interference-plus-noise signal are shown in
Figure 15. It is worth noting that the filter weights are calculated based on these interference-plus-noise segments.
To quantitatively evaluate the interference suppression capability and the biotic sound preservation performance of the proposed algorithm, two real avian recordings were cyclically played from two loudspeakers. The first loudspeaker cyclically played the length-13s real avian recording during the initial 60 s (0–60 s), which was positioned at an angle of 20° and a distance of 1.8 m from the array. The second loudspeaker, placed at an angle of 171° and a distance of 8.2 m, played the length-9s real avian recording during the subsequent 40 s (60 –100 s). Note that the second loudspeaker was in the vicinity of the interference sources’ direction. The spectrograms and normalized power spectra of the two original avian recordings are provided in
Figure 16.
Figure 17 shows the length-100s field recording collected by the reference channel. It is worth noting that the recorded length-100s mixture also contained spontaneous local bird vocalizations. Therefore, the received target signal is not identical to the original playback recordings. The overall SINR of the recording is merely −1.73 dB.
In the real-world experiment, the filter length is set to 51, and the delay item is 25 according to the subspace dimension of interference, while other parameter settings are the same as the simulations. As shown in
Figure 18a, the frequency-dependent thresholds of FADI effectively suppress the influence of interference and ambient noise. However, strong interference noise also causes some TF points associated with weak avian vocalizations to fall below the corresponding thresholds, resulting in considerable missed detections. Specifically, the biotic sound components within the 1–7 kHz range between 0 s and 85 s are almost completely masked in the binary spectrogram.
In comparison with FADI,
Figure 18b–g show that multi-channel denoising preprocessing methods significantly improve the SINR of the recording, thereby considerably reducing missed detections in the binary spectrograms. This is in line with the simulation experiments. However, as demonstrated in
Section 3.2, BIC-FADIw suffers from the self-cancellation of biotic sounds, especially for those near the interference direction. As is illustrated in
Figure 18b, biotic sound at 2–4 kHz between 35 s and 40 s has been suppressed, resulting in missed detections. Even worse, when the second loudspeaker played the second real avian recording in the vicinity of the aerators’ direction, certain TF points associated with avian vocalizations failed to exceed the frequency-dependent threshold, causing numerous missed detections in the later segment of the recording (e.g., biotic sound at 2–6 kHz between 60 s and 100 s).
It is important to emphasize that, as is shown in
Figure 18c–g, the proposed method achieves deep interference suppression while preserving the most biotic sound TF information as expected. It should also be mentioned that
Q = 3 suggests an optimal operational point, which is in line with our simulation experiment. For the field scenario with two aerators, the proposed multi-tap null-steering beamformer can dynamically track real-time variations in interference noise within field recordings, effectively preventing most interference-dominated TF points from appearing in the binary spectrogram. Simultaneously, the proposed parallel beamformer structure compensates for the TF information loss of the biotic sounds caused by the unconstrained single filter.
4. Discussion
In practical applications, the SINRs of biotic sounds in highly complex acoustic environments are often lower than practitioners expect. This makes it difficult for existing commonly used acoustic indices to correctly reflect the acoustic complexity and diversity of biotic sounds under low SINR conditions [
4]. In this work, the denoising preprocessing approach prior to acoustic indices calculations was proposed to improve their robustness.
As shown in
Section 3, both simulation and real-world experiments confirmed that the proposed approach achieves deep interference suppression while maximizing the preservation of avian vocalizations within a much wider SINR range in urban–rural soundscapes characterized by directional anthropogenic interference. These capabilities are particularly desirable for conservation biologists who employ acoustic sensors for long-term ecosystem monitoring, as they enable the reliable remote sensing of ecological acoustic information in challenging urban–rural areas. Beyond acoustic index calculations focused on this study, the proposed denoising preprocessing framework can also serve as a general-purpose front-end module for acoustic event detection and species recognition tasks within environmental sensor networks.
This work focuses on the denoising preprocessing before acoustic indices calculations in the urban–rural area, where a single dominant interference source originates from a narrow angular sector. However, as RBA increasingly extends into urban soundscapes due to ongoing urbanization, the acoustic environment becomes significantly more complex. Here, there are many types of sounds associated with human activities, such as human speech, traffic noise (from cars, airplanes, etc.), and mechanical noise (from lawn mowers, construction machinery, etc.) [
41]. Critically, these multiple interference sources often arrive from arbitrary and dynamic spatial directions. Therefore, an important future direction lies in extending the current framework to address the challenges posed by fast-moving and multiple dispersed interferences, aiming to improve the robustness of acoustic indices in highly complex acoustic environments via advanced signal processing techniques.
It is also worth noting that a dual-microphone array was chosen in this study because large-scale, long-term biodiversity monitoring requires simple and low-cost hardware. However, the complete preprocessing framework is inherently generalizable. It involves first constructing beams towards both the desired signal and the interference directions, followed by an interference suppression stage and a subsequent signal compensation algorithm. This principle can also be realized using other existing acoustic recording devices, such as NT-SF1 Ambisonic systems and Song Meter recorders. This generality underscores the broader applicability of the proposed preprocessing framework, extending well beyond the specific hardware employed in this work.