Assessment of Genetic Diversity in Faba Bean Based on Single Nucleotide Polymorphism
Abstract
:1. Introduction
2. Experimental Section
2.1. Plant Material and DNA Extraction
2.2. SNP Genotyping
Genotype | Breeding History | Seed Size (g/100 sd) | Major Trait | Origin of Source Germplasm |
---|---|---|---|---|
Cultivars | ||||
Aquadulce | Introduced variety, reselected in Aust | 130 | Broad bean | Spain |
Ascot | Seln ex Fiord | 45 | Asco res | Greece |
Cairo | Seln ex open pollinated ILB 2282 | 65 | Adaptation | Cyprus |
Doza | Acc 157 × STW | 50 | Rust res | England, Sudan |
Farah | Seln ex Fiesta | 65 | Asco res | Spain |
Fiesta | Seln ex BPL 1196 B8817 | 65 | Adaptation | Spain |
Fiord | Seln ex landrace | 45 | Adaptation | Greece |
Icarus | Seln ex BPL 710 | 80 | Choc spot res | Ecuador |
Manafest | Seln ex ILB 3026 | 80 | Choc spot res | Ecuador |
Nura | Icarus × Ascot | 60 | Asco res | Ecuador, Greece |
PBA Kareema | Seln ex Aquadulce | 140 | Broad bean | Spain |
PBA Rana | Manafest × (Acc 611 × Manafest) (breeding line AF01006-1) | 75 | Asco res | Ecuador, Lebanon |
PBA Warda | SP99046 × SP99081 | 60 | Rust res | Ecuador, Greece, Ethiopia |
Divine | European variety, not cultivated in Australia | 50 | Low v/cv | Europe |
Australian Breeding Lines | ||||
1269*483/6-1 | BPL 710 × Farah | 70 | Cerco res | Ecuador, Spain |
AF03063-1 | (Icarus × Acc286) × Farah | 70 | Asco res | Spain, Ecuador, Greece |
AF04053 | (Acc 735 × Acc 683) × Farah | 65 | Asco res | Spain, Syria, Ecuador, Turkey |
AF05069 | (Acc 611 × Acc 722) x ((Icarus × Ascot) × Farah) | 70 | Asco res | Lebanon, UK, Spain, Ecuador, Greece |
AF05095 | Acc 920 × Farah | 80 | Asco res | Morocco, Spain |
IX220d/2-5 | IX38 × IX4 | 65 | BLRV res | China, Sudan, Italy |
Germplasm Accessions | ||||
Acc 278 | Seln ex BPL 112 | 75 | Asco res | UK |
Acc 286 | Seln ex landrace | 110 | Early flowering | Crete |
Acc 391#5188 | Seln ex ILB 142 | 55 | Rust res | Morocco |
Germplasm Accessions | ||||
Acc 611 | Seln ex BPL 472 | 80 | Asco res | Lebanon |
Acc 624#8103 | Seln ex ILB 397 | 45 | Rust res | Tunisia |
Acc 683 | ILB 938 × BPL 1390 | 100 | Choc spot | Ecuador, Turkey |
Acc 737 | Seln ex ILB 3033 B 88176 | 120 | Choc spot | Ecuador |
Acc 805#4912 | Seln ex ILB 445 | 35 | BLRV res | Yemen |
Acc 868 | ILB 68 × Fiord | 65 | Zero tannin | UK, Greece |
Acc 920/3 | Seln ex landrace | 90 | Asco res | Morocco |
Acc 970 | Seln ex ILB 752 | 100 | Asco res | Sweden (Donor) |
Acc 973 | Seln ex ILB 3025 | 55 | Rust res | Ecuador |
Acc 1107/2 | Seln ex ILB 2582 | 100 | Cerco res | Morocco |
Acc 1108/1 | Seln ex ILB 2583 | 80 | Cerco res | Morocco |
Acc 1129/2 | Seln ex ILB 3362 | 90 | Salt tol | China (Zhejiang) |
Acc 1206#4919 | Seln ex ILB 5220 | 110 | BLRV res | China (Yunnan) |
Acc 1248/4 | Seln ex ILB 5333 | 90 | Choc spot res | Ecuador |
Acc 1257-3 | Seln ex ILB 5353 | 80 | Choc spot res | Ecuador |
Acc 1322/2 | L 82003 B8833 (BPL 472 × BPL 261) | 75 | Cerco res | Lebanon, Greece |
Acc 1430/3 | Seln ex BPL 217 | 150 | Asco res | Morocco |
Acc 1477/4 | Seln ex landrace | 70 | Asco res | Crete |
Acc 1487/7 | Seln ex ILB 917 | 70 | Salt tol | Algeria |
Acc 1604#6108 | Seln ex BPL 5247 | 70 | BYMV res | Afghanistan |
Acc 1714/1 | Seln ex ILB 5561 | 140 | Choc spot res | China (Gansu) |
Acc 1727 | Seln ex landrace | 100 | Early flowering | China (Guangxi) |
2.3. Genetic Diversity and Population Structure Analysis
3. Results and Discussion
3.1. SNP Polymorphism
3.2. Genetic Diversity Analysis
3.3. Relationships between Genetic Diversity and Breeding History
3.4. Population Structure Analysis
4. Conclusions
Supplementary Materials
Acknowledgments
Conflicts of Interest
References and Notes
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Kaur, S.; Cogan, N.O.I.; Forster, J.W.; Paull, J.G. Assessment of Genetic Diversity in Faba Bean Based on Single Nucleotide Polymorphism. Diversity 2014, 6, 88-101. https://doi.org/10.3390/d6010088
Kaur S, Cogan NOI, Forster JW, Paull JG. Assessment of Genetic Diversity in Faba Bean Based on Single Nucleotide Polymorphism. Diversity. 2014; 6(1):88-101. https://doi.org/10.3390/d6010088
Chicago/Turabian StyleKaur, Sukhjiwan, Noel O. I. Cogan, John W. Forster, and Jeffrey G. Paull. 2014. "Assessment of Genetic Diversity in Faba Bean Based on Single Nucleotide Polymorphism" Diversity 6, no. 1: 88-101. https://doi.org/10.3390/d6010088
APA StyleKaur, S., Cogan, N. O. I., Forster, J. W., & Paull, J. G. (2014). Assessment of Genetic Diversity in Faba Bean Based on Single Nucleotide Polymorphism. Diversity, 6(1), 88-101. https://doi.org/10.3390/d6010088