The Metabolic Architecture of Glaucoma: A Unified Framework of Cofactor Failure and Kynurenine Dysregulation
Abstract
1. Introduction
2. Critical Appraisal of the Primary Metabolomic Evidence
3. The Kynurenine Pathway: A Proposed Mechanistic Bridge
4. Alternative Explanations for AH Amino Acid Elevations
5. Tetrahydrobiopterin Deficiency: A Working Hypothesis in Glaucoma
6. NAD Decline and Nicotinamide Neuroprotection: The Best-Evidenced Metabolic Framework
7. One-Carbon Metabolism Dysfunction in Glaucoma
8. Cross-Study Metabolomic Evidence: Consensus, Discordances, and Emerging Pathways
9. Discussion
10. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| 3-HK | 3-hydroxykynurenine |
| AAT | alpha-1-antitrypsin |
| AH | aqueous humor |
| ARE | antioxidant response element |
| H2BIP | 7,8-dihydrobiopterin |
| H4BIP | tetrahydrobiopterin |
| DHFR | dihydrofolate reductase |
| DHPR | dihydropteridine reductase |
| DR | diabetic retinopathy |
| eNOS | endothelial nitric oxide synthase |
| FC | fold change |
| FDR | false discovery rate |
| GCH1 | gene encoding GTP cyclohydrolase I |
| GCIPL | ganglion cell-inner plexiform layer |
| GTPCH I | GTP cyclohydrolase I |
| IDO | indoleamine 2,3-dioxygenase |
| IFN-γ | interferon-gamma |
| IL-1β | interleukin-1 beta |
| IL-6 | interleukin-6 |
| IOP | intraocular pressure |
| iPSC | induced pluripotent stem cell |
| KAT | kynurenine aminotransferase |
| KMO | kynurenine monooxygenase |
| KP | kynurenine pathway |
| KYN | kynurenine |
| KYNA | kynurenic acid |
| LC-HRMS | liquid chromatography high-resolution mass spectrometry |
| MTHFR | methylenetetrahydrofolate reductase |
| NAD | nicotinamide adenine dinucleotide |
| NMN | nicotinamide mononucleotide |
| NO | nitric oxide |
| NOS | nitric oxide synthase |
| Nrf2 | nuclear factor erythroid 2-related factor 2 |
| NTG | normal tension glaucoma |
| OCR | oxygen consumption rate |
| ONH | optic nerve head |
| ONOO− | peroxynitrite |
| OHT | ocular hypertension |
| O2•− | superoxide |
| PACG | primary angle-closure glaucoma |
| PAH | phenylalanine hydroxylase |
| PBMC | peripheral blood mononuclear cell |
| PCD | pterin-4a-carbinolamine dehydratase |
| PEXG | pseudoexfoliative glaucoma |
| PEXS | pseudoexfoliation syndrome |
| PGC-1α | peroxisome proliferator-activated receptor gamma coactivator-1 alpha |
| POAG | primary open-angle glaucoma |
| RGC | retinal ganglion cell |
| RNFL | retinal nerve fiber layer |
| ROS | reactive oxygen species |
| SERPINA1 | serpin family A member 1 gene |
| SIRT | sirtuin |
| SPONCS | Simplified Pre-Operative Nuclear Classification Score |
| SPR | sepiapterin reductase |
| TGF-β | transforming growth factor-beta |
| TH | tyrosine hydroxylase |
| Tfam | mitochondrial transcription factor A |
| TNF-α | tumor necrosis factor-alpha |
| TPH | tryptophan hydroxylase |
| VF | visual field |
| 5-MTHF | 5-methyltetrahydrofolate |
| PCD | 4a-carbinolamine dehydratase |
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| Drug Class | Example Agents | IOP Mechanism | Key Side Effects | Metabolic/Mitochondrial Relevance |
|---|---|---|---|---|
| Beta-adrenergic antagonists | Timolol, betaxolol | Reduce aqueous humor production (~20–30%) [6] | Bradycardia, bronchospasm, fatigue | Reduce AH production—may concentrate AH metabolites non-specifically; systemic mitochondrial respiratory effects reported with timolol [7] |
| Prostaglandin analogues | Latanoprost, bimatoprost | Increase uveoscleral outflow [8] | Iris pigmentation, periorbital fat atrophy, eyelash growth | No direct metabolic pathway relevance; TGF-β interactions potentially relevant to PEXS [9] |
| Carbonic anhydrase inhibitors | Dorzolamide, brinzolamide | Reduce aqueous production via CA-II inhibition [10] | Metabolic acidosis (systemic); ocular burning (topical) | CA-II inhibition alters AH acid-base balance; systemic CA inhibitors reduce HCO3− and may affect mitochondrial CO2 handling [11] |
| Alpha-2 agonists | Brimonidine | Reduce aqueous production; increase uveoscleral outflow [12] | CNS depression (infants); dry mouth; allergy | Brimonidine has independent neuroprotective properties via α2-receptor-mediated BDNF upregulation, relevant to RGC survival [13] |
| Rho kinase inhibitors | Netarsudil | Increase trabecular outflow; reduce episcleral venous pressure [14] | Conjunctival hyperaemia, cornea verticillata | Novel class with vascular and NO-pathway effects; potentially relevant to arginine/proline and eNOS framework [15] |
| Metabolite/Pathway | Glaucoma [24,25] | PEXS [25,27] | Diabetes [25,28] | Interpretation |
|---|---|---|---|---|
| Phe ↑, Tyr ↑ | Yes | Yes | Variable | Non-specific oxidative/inflammatory signal |
| Trp ↑ (substrate accumulation) | Yes | Yes | No (3-HK ↑ instead) | Upstream block in glaucoma/PEXS; downstream flux in diabetes |
| KMO ↑ (3-HK/KYN ratio) | Yes | No | Yes | Absent in PEXS despite shared Trp ↑—critical specificity finding |
| Gln ↑ | Yes | Not reported | Not reported | Cross-validated across independent groups [18,22,23] |
| 3-HK ↑ (product elevation) | No | No | Yes | Diabetes-specific KMO saturation—distinguishes from glaucoma |
| KAT ↓ (SPONCS-dependent) | Yes (confound) | Yes (confound) | Yes (confound) | Universal cataract-severity confound requiring SPONCS covariate [26] |
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Caikovska, L.; Veitners, A.; Lavrinovica, D.; Vanags, J.; Klavins, K.; Laganovska, G.; Zemitis, A. The Metabolic Architecture of Glaucoma: A Unified Framework of Cofactor Failure and Kynurenine Dysregulation. Int. J. Mol. Sci. 2026, 27, 4311. https://doi.org/10.3390/ijms27104311
Caikovska L, Veitners A, Lavrinovica D, Vanags J, Klavins K, Laganovska G, Zemitis A. The Metabolic Architecture of Glaucoma: A Unified Framework of Cofactor Failure and Kynurenine Dysregulation. International Journal of Molecular Sciences. 2026; 27(10):4311. https://doi.org/10.3390/ijms27104311
Chicago/Turabian StyleCaikovska, Liva, Alberts Veitners, Diana Lavrinovica, Juris Vanags, Kristaps Klavins, Guna Laganovska, and Arturs Zemitis. 2026. "The Metabolic Architecture of Glaucoma: A Unified Framework of Cofactor Failure and Kynurenine Dysregulation" International Journal of Molecular Sciences 27, no. 10: 4311. https://doi.org/10.3390/ijms27104311
APA StyleCaikovska, L., Veitners, A., Lavrinovica, D., Vanags, J., Klavins, K., Laganovska, G., & Zemitis, A. (2026). The Metabolic Architecture of Glaucoma: A Unified Framework of Cofactor Failure and Kynurenine Dysregulation. International Journal of Molecular Sciences, 27(10), 4311. https://doi.org/10.3390/ijms27104311

