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Article

Transcriptomics and Proteomics Reveal the Cellulose and Pectin Metabolic Processes in the Tension Wood (Non-G-Layer) of Catalpa bungei

1
State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
2
Luoyang Academy of Agriculture and Forestry Science, Luoyang 471002, China
3
State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China
4
Department of Biology, Centre for Forest Biology, University of Victoria, 3800 Finnerty Road, Victoria, BC V8P5C2, Canada
*
Author to whom correspondence should be addressed.
Int. J. Mol. Sci. 2020, 21(5), 1686; https://doi.org/10.3390/ijms21051686
Received: 7 January 2020 / Revised: 25 February 2020 / Accepted: 26 February 2020 / Published: 1 March 2020
(This article belongs to the Special Issue Plant Cell and Organism Development)
Catalpa bungei is an economically important tree with high-quality wood and highly valuable to the study of wood formation. In this work, the xylem microstructure of C. bungei tension wood (TW) was observed, and we performed transcriptomics, proteomics and Raman spectroscopy of TW, opposite wood (OW) and normal wood (NW). The results showed that there was no obvious gelatinous layer (G-layer) in the TW of C. bungei and that the secondary wall deposition in the TW was reduced compared with that in the OW and NW. We found that most of the differentially expressed mRNAs and proteins were involved in carbohydrate polysaccharide synthesis. Raman spectroscopy results indicated that the cellulose and pectin content and pectin methylation in the TW were lower than those in the OW and NW, and many genes and proteins involved in the metabolic pathways of cellulose and pectin, such as galacturonosyltransferase (GAUT), polygalacturonase (PG), endoglucanase (CLE) and β-glucosidase (BGLU) genes, were significantly upregulated in TW. In addition, we found that the MYB2 transcription factor may regulate the pectin degradation genes PG1 and PG3, and ARF, ERF, SBP and MYB1 may be the key transcription factors regulating the synthesis and decomposition of cellulose. In contrast to previous studies on TW with a G-layer, our results revealed a change in metabolism in TW without a G-layer, and we inferred that the change in the pectin type, esterification and cellulose characteristics in the TW of C. bungei may contribute to high tensile stress. These results will enrich the understanding of the mechanism of TW formation. View Full-Text
Keywords: tension wood; transcriptome; proteomics; Raman spectroscopy; cellulose; pectin; Catalpa bungei tension wood; transcriptome; proteomics; Raman spectroscopy; cellulose; pectin; Catalpa bungei
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MDPI and ACS Style

Xiao, Y.; Yi, F.; Ling, J.; Wang, Z.; Zhao, K.; Lu, N.; Qu, G.; Kong, L.; Ma, W.; Wang, J. Transcriptomics and Proteomics Reveal the Cellulose and Pectin Metabolic Processes in the Tension Wood (Non-G-Layer) of Catalpa bungei. Int. J. Mol. Sci. 2020, 21, 1686. https://doi.org/10.3390/ijms21051686

AMA Style

Xiao Y, Yi F, Ling J, Wang Z, Zhao K, Lu N, Qu G, Kong L, Ma W, Wang J. Transcriptomics and Proteomics Reveal the Cellulose and Pectin Metabolic Processes in the Tension Wood (Non-G-Layer) of Catalpa bungei. International Journal of Molecular Sciences. 2020; 21(5):1686. https://doi.org/10.3390/ijms21051686

Chicago/Turabian Style

Xiao, Yao, Fei Yi, Juanjuan Ling, Zhi Wang, Kun Zhao, Nan Lu, Guanzheng Qu, Lisheng Kong, Wenjun Ma, and Junhui Wang. 2020. "Transcriptomics and Proteomics Reveal the Cellulose and Pectin Metabolic Processes in the Tension Wood (Non-G-Layer) of Catalpa bungei" International Journal of Molecular Sciences 21, no. 5: 1686. https://doi.org/10.3390/ijms21051686

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