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Article

Nuclear Magnetic Resonance Metabolomics Approach for the Analysis of Major Legume Sprouts Coupled to Chemometrics

1
Pharmacognosy Department, Faculty of Pharmacy, Cairo University, Cairo 12613, Egypt
2
Chemistry Department, School of Sciences & Engineering, The American University in Cairo, New Cairo 11835, Egypt
3
Pharmacognosy Department, Faculty of Pharmacy, Port Said University, Port Said 42526, Egypt
4
Pharmacognosy Department, Faculty of Pharmacy, Misr University for Science & Technology (MUST), 6th October City 12566, Egypt
5
Pharmacognosy Department, Faculty of Pharmacy, Beni-Suef University, Beni-Suef 62521, Egypt
6
Department of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Weinberg 3, 06120 Halle (Saale), Germany
*
Authors to whom correspondence should be addressed.
Molecules 2021, 26(3), 761; https://doi.org/10.3390/molecules26030761
Submission received: 26 December 2020 / Revised: 27 January 2021 / Accepted: 28 January 2021 / Published: 2 February 2021
(This article belongs to the Special Issue Food and Drug Analysis Ⅱ)

Abstract

:
Legume sprouts are a fresh nutritive source of phytochemicals of increasing attention worldwide owing to their many health benefits. Nuclear magnetic resonance (NMR) was utilized for the metabolite fingerprinting of 4 major legume sprouts, belonging to family Fabaceae, to be exploited for quality control purposes. Thirty-two metabolites were identified belonging to different classes, i.e., fatty acids, sugars, amino acids, nucleobases, organic acids, sterols, alkaloids, and isoflavonoids. Quantitative NMR was employed for assessing the major identified metabolite levels and multivariate data analysis was utilized to assess metabolome heterogeneity among sprout samples. Isoflavones were detected exclusively in Cicer sprouts, whereas Trigonella was characterized by 4-hydroxyisoleucine. Vicia sprouts were distinguished from other legume sprouts by the presence of L-Dopa versus acetate abundance in Lens. A common alkaloid in all sprouts was trigonelline, detected at 8–25 µg/mg, suggesting its potential role in legume seeds’ germination. Trigonelline was found at highest levels in Trigonella sprouts. The aromatic NMR region data (δ 11.0–5.0 ppm) provided a better classification power than the full range (δ 11.0–0.0 ppm) as sprout variations mostly originated from secondary metabolites, which can serve as chemotaxonomic markers.

Graphical Abstract

1. Introduction

The plants of family Fabaceae grow worldwide in different climatic regions and are considered to be the third largest family among the flowering plant families, with about 700 genera and 20,000 species. Legume seeds are widely incorporated in the human diet, especially in developing countries, for their rich nutrient content of protein, providing about 33% of human dietary protein, nitrogen, starch, dietary fiber, and minerals [1,2,3]. Legumes are enriched in phytochemicals, i.e., flavonoids, alkaloids, phenolic acids, and saponins, some of which have proven or proposed health-promoting action and medicinal importance, offering a protective effect against several chronic diseases, especially inflammation-based ones [4].
The presence of antinutrients in legume seeds, e.g., tannins, phytic acid, trypsin inhibitors, and hemagglutinins nevertheless limits the nutritional value of many legumes [5]. Also, alkaloids are considered antinutrients due to their potential harmful actions, e.g., vicine and convicine in Vicia cause acute hemolytic anemia (favism) in patients with G6PD deficiency [6]. Germination is a food processing technique, in addition to cooking and autoclaving, to improve the nutritional quality of legumes by decreasing the content of antinutritional factors. Compared to the raw seeds, sprouts have a higher digestibility, biological value, higher vitamins content, and better minerals bioavailability as a result of either the de novo biosynthesis or transformation of complex food materials into a more accessible form during the germination process, thus germination is considered a kind of pre-digestion [7,8,9]. Moreover, the essential amino acids content is found higher in sprouted legumes than suggested in the World Health Organization (WHO) standards (exceeds 40% of the total identified amino acids) [5]. They are also considered as a good source of ω-3 fatty acids and their intake is recommended for maintaining a desirable ω-6 to ω-3 ratio in the human body, as stated by the WHO and Food and Agriculture Organization (FAO) [7]. Aside from attenuating antinutrient levels, germination increases health-promoting phytochemical levels, e.g., chickpea isoflavones were found to be ca. 300 times higher than in chickpea seeds [10].
Sprouts can be produced in a short period through simple, inexpensive, and environmentally safe germination procedures, offering a healthy, high-protein, low-fat, and low-calories diet [11]. They are often consumed fresh in salads or as appetizers, giving a sweet tender taste and crunchy texture rather than fibrous old plants, and also could be included in low-cost food formulations [12].
Sprouts’ utilization originated in the Far East region and spread to Western Europe and America in the late 20th and 21st centuries, especially with the increasing awareness of seed sprout health benefits [13]. Growing interest is paid to the evaluation of the nutritional value and the biological importance of sprouts [14] as a result of increasing consumption of such highly nutritive food worldwide [15]. Epidemiological studies support a relationship between the consumption of food products rich in phyto-phenolics and a low incidence of coronary heart disease, atherosclerosis, cancer, and stroke [16,17,18,19]. Legumes and their sprouts are rich in alkaloids, flavonoids, and terpenoids/steroids, which have a myriad therapeutic effects such as hypoglycemic, antimicrobial, antioxidant, and anti-inflammatory activities [20,21,22].
Due to the widespread medicinal uses and nutritional importance of legume sprouts, the authentication and standardization of their extracts are very important to ensure their quality and purity. The seeds of different legumes can be distinguished from each other on the bases of morphological characters, while it is difficult in the case of sprouts and even more when in an extract. This increases the need for employing analytical techniques that can confirm its origin as well as its standardization for future incorporation in nutraceuticals. NMR (nuclear magnetic resonance) and MS (mass spectrometry) are widely utilized for metabolite identification and quantification. The selection of a particular technique is dependent on its intrinsic gains and drawbacks, e.g., NMR is preferred to MS as it is a non-destructive, highly selective technique that could be utilized for metabolite structure elucidation and absolute quantification with the least sample processing and loss [23]. NMR metabolomic analysis was used successfully in various functional food systems for quality control assessment, e.g., date fruits, Nigella seeds, and cinnamon bark [24,25,26]. 1H-NMR allows for the simultaneous detection of a wide range of primary and secondary metabolites, making it well suitable for metabolite profiling and standardization purposes. A direct comparison among the concentrations of all metabolites can be achieved in an NMR spectrum, as signal intensity is directly proportional to its compound molar concentration.
The aim of this work was to identify, quantify, and standardize the major metabolites in legume sprouts (chickpea, fava, fenugreek, and lentil) using the NMR approach. Finally, multivariate data analysis was employed to classify sprout samples according to the identified metabolites to be compared with the previously published LC-MS (liquid chromatography-mass spectrometry) and GC-MS (gas chromatography-mass spectrometry) classification models.

2. Results and Discussion

2.1. NMR Fingerprinting of Legume Sprouts

NMR-based metabolomics is a reliable technique widely employed for the identification and quantification of metabolite classes in crude food extracts [27], mostly supported by the development of 2D-NMR (two dimensional nuclear magnetic resonance) analysis that aids in structural elucidation. In the present study, the methanol extracts from Cicer, Lens, Trigonella, and Vicia sprouts were analyzed via 1H-NMR and assigned in accordance with literature data and in-house databases, and to some extent, further confirmed by 2D-NMR experiments, i.e., COSY (correlation spectroscopy), HSQC (heteronuclear single quantum coherence spectroscopy), and HMBC (heteronuclear multiple bond correlation) (Supplementary Figures S1–S12). The 1H-NMR spectra of the different extracts are shown in Figure 1, with their corresponding chemical shifts and signal multiplicities displayed in Table 1. A total of 32 metabolites were clearly detected with their corresponding structures, as shown in Figure 2.
In the 1H-NMR spectra of the different samples, most high-intensity signals expectedly belong to primary metabolites, i.e., fatty acids (12), sugars (36), amino acids (719), nucleobases (20), and organic acids (2123). In contrast, much lower-intensity peaks can be assigned to secondary metabolites, especially in the aromatic region, including sterols (24), alkaloids (25), and isoflavonoids (2632), as listed in Table 1, and shown in Figure 1.
The sugars anomeric region (δ 4.0–5.5 ppm) in the 1H-NMR spectra (Figure 1A and Supplementary Figure S1) showed signals related to sucrose (δ 5.39), fructose (δ 4.03 and 4.10), α-glucose (δ 5.11), and β-glucose (δ 4.48) as the main sugars (compounds 36) in sprouts [11]. Sucrose was highest in Cicer sprouts in agreement with GC-MS findings [28]. Fatty, organic, and amino acids were detected in the up-field region (δ 1.5–4.0 ppm) of the spectra (Figure 1A). Nearly all sprouts were found to be enriched in essential and non-essential amino acids. Aliphatic amino acids (714) included: alanine (δ 1.46 (H-3)), valine (δ 1.02 (H-4) and 1.06 (H-5)), threonine (δ 1.31 (H-4)), asparagine (δ 2.94 (H-2a) and 2.72 (H-2b)), and proline (δ 3.98 (H-1), 2.11 and 2.30 (H-2), 1.96 (H-3) and 3.25 and 3.37 (H-4)). In contrast, 4-hydroxy-isoleucine (δ 1.24 (H-5) and 0.99 (H-6)) was only detected in Trigonella extract (Figure 1A and Supplementary Figures S1–S5). Additionally, choline, a quaternary ammonium base (δ 3.21 (N-CH3)), and its oxidation product, betaine (δ 3.27 (N-CH3)), were detected in all sprouts (Figure 1A and Supplementary Figures S1–S4). Choline participates in lecithin formation involved in cell membrane stabilization and additionally in the biosynthesis of acetylcholine neurotransmitter [29]. Betaine reduces animal body fat and improves growth and food utilization [30]. Additionally, both compounds have antidiabetic actions rationalizing for the use of some sprouts in diabetes [31].
With regards to the down-field region (δ 6.0–9.5 ppm) (Figure 1B and Supplementary Figures S6–S8), 2 aromatic amino acids (15 and 16) were detected in all sprouts yet were not observed in Cicer samples. These amino acids were phenylalanine (δ 7.33 (H-3′/H-5′) and 7.28 (H-2′/H-6′)) and tyrosine (δ 6.76 (H-3′/H-5′) and 7.12 (H-2′/H-6′)). L-Dopa (17) (δ 6.73 (H-2′), 7.75 (H-5′) and 6.61 (H-6′)) was detected exclusively in Vicia sprouts [32], corroborating previous results using both LC-MS and GC-MS [28]. The essential amino acids tryptophan (18) (δ 7.19 (H-5), 7.33 (H-7), 7.10 (H-8), 7.05 (H-9) and 7.63 (H-10)) and histidine (19) (δ 7.75 (H-5) and 7.01 (H-6)) were detected in all examined sprouts [11]. The identified amino acids were previously listed in germinated chickpea and lentil seed amino acid profiles [9]. Histidine and tryptophan are precursors of histamine and serotonin respectively, and can play a role in the treatment of anxiety and depression [33,34].
According to previous investigations, the antihyperlipidemic and hypoglycemic properties of Trigonella seeds were strongly related to their amino acid composition, especially 4-hydroxyisoleucine (10), which was detected exclusively in Trigonella sprouts (Figure 1A and Supplementary Figure S3) and is considered the precursor of sotolon (3-hydroxyl-4,5-dimethyl-2(5H)-furanone), the powerful aroma component in fenugreek [35,36]. Another potential hypoglycemic alkaloid detected in most sprouts was trigonelline (25), identified from δ 9.23 (H-2) and 4.44 (N-CH3) characteristic signals (Figure 1B and Supplementary Figures S8, S9, and S12) [37]. Trigonelline was detected in all legumes studied and in accordance with LC-MS findings [28]. Trigonelline is widely distributed in dry legume seeds [38], however, the previous studies concerning its presence in germinated legumes are scarce and only report on fenugreek [39]. In plants, trigonelline acts as a reserve molecule which turns into NAD (nicotinamide adenine dinucleotide) during the germination process of, e.g., coffee seeds [40], which is suggestive for a role in sprout germination in legumes.
Several studies showed that sprouted seeds contain higher amino acid levels than their seeds, concurrent with other beneficial constituents, such as phenolic compounds. This would thus be reflected in improved antioxidant activity of the germinated seeds [41].
The 1H-NMR spectra showed low-intensity signals attributed to cytosine (20) (δ 5.70 (H-5) and 8.01 (H-6)) in all sprouts (Figure 1B and Supplementary Figure S8). Nucleobases play an important part in the regulation of many physiological processes in the human body via the purine or pyrimidine receptors. Additionally, some cytosine derivatives were reported to possess diverse biological activities such as antimicrobial and anticancer properties [42,43].
The 1H-NMR spectral analysis also revealed distinct signals from unsaturated ω-3 and ω-6 fatty acids (1 and 2) assigned to the allylic CH2 (δ 2.05–2.09), bis-allylic CH2 (δ 2.77 and 2.81), and olefinic (δ 5.30–5.38) protons (Figure 1A and Supplementary Figures S2–S5). The complete primary metabolite profiles of legume sprouts were previously listed using GC-MS, with sucrose found more enriched in Cicer sprouts [28], and also confirmed herein by absolute NMR quantification (Table 2).
1H-NMR spectral analysis indicated that all examined legume sprouts encompassed common organic acids (2123), including 4-aminobutyric acid (δ 2.36 (H-2), 1.88 (H-3), 2.96 (H-4)) and fumaric acid (δ 6.67 (H-2/H-3)), whereas acetic acid (δ 1.92 (CH3)) exhibited its highest abundance in Lens extract (Figure 1A and Supplementary Figures S2–S6) [44]. In accordance with recent studies, high levels of organic acids provide carbon building blocks for defensive compounds production in plant tissues and are likely to function as phytoalexins at the sprout stage critical in plant life [45]. Moreover, organic acids are important food components, responsible for organoleptic characteristics as well as food safety and quality determination [46].
Among the secondary metabolites detected in all sprouts, β-sitosterol (24) showed relatively weak up-field signals, identified from its characteristic methyl signals δ 0.72 (H-18), 1.02 (H-19), and 0.83 (H-26/H-27), in addition to the olefinic proton at δ 5.34 (H-6) (Figure 1A and Supplementary Figure S2) [47].
One of the most remarkable classes of secondary metabolites in Cicer sprout and absent from other sprouts included isoflavones or phytoestrogens (2632), showing distinct H-2 proton singlets in the down-field region (δ 8.0–8.3 ppm), with daidzein and genistein as major forms along with their methylated and malonyl-glycoside derivatives (Figure 1B and Supplementary Figures S10–S12), and in accordance with reported data [48]. All detected isoflavones showed a monosubstituted B-ring system revealed by signals at δ 6.99 (H-3′/H-5′) and 7.49 (H-2′/H-6′) ppm (Supplementary Figure S10). Di-substituted ring-A structure signals for genistein-based isoflavones (2628) were assigned based on a set of meta-coupled doublets (δ 6.23 (H-6) and 6.35 (H-8) ppm for biochanin-A (26), δ 6.52 (H-6) and 6.71 (H-8) ppm for genistin (27), and δ 6.50 (H-6) and 6.72 (H-8) ppm for malonyl-genistin (28)). In contrast, the appearance of two doublets and a doublet of doublet signals in isoflavones (29) (δ 6.86 (H-8), 8.05 (H-5) and 6.94 (H-6) ppm), (30) (δ 7.25 (H-8), 8.14 (H-5) and 7.19 (H-6) ppm), and (31) (δ 7.22 (H-8), 8.14 (H-5) and 7.27 (H-6) ppm) revealed a mono-substituted ring-A system and allowed to annotate these compounds as formononetin (29), daidzin (30), and malonyl daidzin (31), respectively (Supplementary Figure S10). Other spectral information to distinguish between the two isoflavones was based on the 13C chemical shifts, with the C-ring carbonyl in genistein moieties appearing more down-field shifted (δ 183.7) than that of daidzein isoflavones (δ 179.3) (Table 1 and Supplementary Figure S12) [49].
Regarding the annotation of malonyl-glucoside forms of isoflavones, assignment was based on the key malonyl CH2 signal (δ 3.17 ppm), concurrent with the down-field shifts of the H-6 and H-8 aromatic protons at δ 6.50 and 6.72 (malonyl-genistin (28)) and δ 7.22 and 7.27 (malonyl-daidzin (31)) respectively, with respect to their corresponding glucosides at δ 6.52 and 6.71 (genistin (27)) and δ 7.19 and 7.25 (daidzin (30)), respectively (Table 1 and Supplementary Figure S10). These down-field shifts were attributed to the de-shielding effect of malonic acid attached to a hydroxy group of glucose and in agreement with reported data [49]. However, the unexpected up-field shift of malonyl-genistin H-6 (Supplementary Figure S10) is attributed to the hydrogen bonding between the free carboxylate of malonic acid with the hydroxyl group at C-5 of genistin, resulting in a little shielding near H-6. This assumption is confirmed by observing that H-6 of malonyl-daidzin without a hydroxyl group at C-5 does not show this pattern (Supplementary Figure S10) [49]. Malonyl isoflavone glucosides were previously detected in chickpea seeds [50].
Methylated isoflavones, i.e., biochanin-A (26) and formononetin (29) showed distinct methyl signals (δ 3.83) and were found to be the major forms among all isoflavones detected (Figure 1A), and in agreement with UPLC-MS (ultra-performance liquid chromatography-mass spectrometry) results [28]. Biochanin-A, formononetin, and their 7-O-glucosides were previously isolated from chickpea seeds and sprouts [51,52]. Increase in isoflavones level was observed upon sprouting, suggesting that their biosynthesis may be activated during the germination process [51].
Among other isoflavonoids detected in Cicer 1H-NMR spectrum was cicerin (32) (Figure 1A and Supplementary Figures S11 and S12), characterized from a key signal for the dioxygenated methylene moiety at δ 5.98 (OCH2O), 2 meta-coupled aromatic protons at δ 5.98 (H-6) and 5.96 (H-8), and 2 signals at δ 6.37 (H-3′) and δ 6.80 (H-6′) [53]. Cicerin was proposed as an important phytoalexin that plays a significant role in Cicer defense against microbial infection, especially at sprout critical stage in the plant lifecycle [53].
Isoflavonoids are well-recognized for a myriad of biological effects, i.e., antioxidant, estrogenic, antimicrobial, antiosteoporosis, and anticancer properties [54], some of which are rare in other flavonoid subclasses, such as strong phytoestrogenic effects. Previous findings revealed that germination remarkably increased isoflavones content, when compared to raw seeds, and hence is likely to contribute to enhanced antioxidant or estrogenic effects. This suggests that the germinated Cicer seeds may be a promising functional food component being rich in isoflavonoids [50].

2.2. Quantification of Major Metabolites Detected Via 1H-NMR

1H-NMR was further used to determine the absolute amounts of the identified metabolites in legume sprout extracts for future standardization purposes. NMR has been utilized efficiently in many medicinal plants and food metabolites for quantification without standard requirements [23,26]. For each of the previously mentioned identified metabolites, the ability of 1H-NMR to recognize a single well-resolved signal further allowed for their unbiased absolute quantification in sprout samples (Supplementary Table S1). The concentrations of the identified metabolites were expressed as µg/mg dry powder in different legume sprout samples, as shown in Table 2.
Sugars represented the major metabolites in all sprouts with maximal levels observed in Cicer extract (468.3 μg/mg total sugars), and with sucrose amounting for the major sugar. The high sugar content adds to the palatable taste of Cicer sprout. The percentage of the identified sugars ranges from 38% to 47%, and in accordance with that previously stated for other sprouts [5,9,55].
Total choline and betaine levels were quantified in all specimens, reaching up to 119.1 μg/mg in Vicia, rationalizing for its use as a natural antidiabetic [31]. Similarly, total amino acids content reached its highest level in Vicia samples (266.5 μg/mg). The high amino acids content adds to the nutritional value of Vicia sprout. However, 4-hydroxyisoleucine (51.1 μg/mg) was detected exclusively in Trigonella sprout, which may be correlated to its potential antidiabetic effect.
The absolute quantification utilizing NMR also showed that the highest levels of trigonelline were detected in Trigonella and Cicer sprouts, amounting to ca. 25 and 18 µg/mg, respectively. Trigonella and Cicer sprouts were also the richest in ω-3 fatty acids, amounting to 21.7 and 20.1 µg linolenic acid equivalent/mg dry matter respectively, as shown in Table 2. All sprouts contained the desirable ω-6 to ω-3 ratio recommended by the WHO and FAO, agreeing with the previously stated ratio in Trigonella sprouts [7]. Vicia sprouts were found rich in the anti-parkinsonismic L-Dopa, amounting to 112 µg/mg, confirming previous reports in sprouts of Vicia faba varieties [32]. Cicer sprouts presented a good source of isoflavonoids (~350 µg/mg) with malonylated isoflavone glycosides, i.e., malonyl-daidzin and malonyl-genistin, amounting to 80.2 and 78.9 µg/mg of the dried sprout matter, respectively (Table 2).
To the best of our knowledge and compared to previous NMR studies, this study provides the first comprehensive NMR metabolites fingerprinting and standardization of 4 sprouted legumes for future quality control purposes.

2.3. 1H-NMR Data Multivariate Data Analyses

Multivariate analysis results point to an advantage of our comparative metabolomics approach to reveal sample relatedness. Principal component analysis (PCA) and orthogonal projection to latent structures-discriminant analysis (OPLS-DA) are often utilized to analyze large complex datasets in order to define the differences between groups of data or to interpret group differences in meaningful ways.

2.3.1. Unsupervised Multivariate PCA of Full-Range 1H-NMR Data

PCA is an extensively used multivariate data analysis method for chemometrics. PCA was performed within the full 1H-NMR region (δ 11.0–0.0 ppm) (Figure 3) for all sprouts, with distance to the model (DModX) test used to verify the presence of outliers (Supplementary Figure S13). PC1, representing the main principal component, accounted for 58% of the total variance. The PC1/PC2 scores plot (Figure 3A) revealed 3 major distinct clusters corresponding to the four examined sprouts. Cicer specimens were located on the far-right side of the plot (positive PC1), while the remaining samples were positioned on the left side (negative PC1). Discrimination of Trigonella specimens from Vicia and Lens was observed along PC2 (23% of the variance). The score plot showed good reproducibility for all sprout specimens, confirming a low technical variability for the extraction method. Metabolites accounting for specimen’s segregation in a PCA score plot were revealed from the loading plot (Figure 3B), displaying the most discriminatory 1H-NMR signals. Three major groups stood out in this plot. The first corresponded to the 1H-NMR signals for isoflavonoids (δ 6.96) and sucrose (δ 3.61 and 3.71), contributing positively to PC1, and were found more enriched in Cicer. The second showed a negative effect on PC1 from 1H-NMR signals, which were assigned to asparagine (δ 3.84) and 4-hydroxy-isoleucine (δ 1.24), negatively affecting PC2 and abundant in Trigonella. Sugars (δ 3.76 and 3.64) positively effect PC2 and were found abundant in all sprouts except Cicer, suggesting that such sugars may be glucose and/or fructose. Metabolites showing less influence according to the loading score emanated from 1H-NMR signals of L-Dopa (δ 6.73 and 6.75), which was found exclusively in Vicia sprouts and had a negative effect on PC1 and a positive one on PC2 (Figure 3B). To confirm that the discrimination between samples is mostly affected by such metabolites among sprouts, i.e., sucrose, 4-hydroxy-isoleucine, and asparagine, box plots were attempted for these metabolites using NMR detection (Supplementary Figure S14). In agreement with the PCA results, the highest level of sucrose was found in Cicer, while Trigonella was the sprout most enriched in hydroxy-isoleucine and asparagine. Details on the absolute quantifications for all major compounds detected in all sprouts are provided in Table 2. PCA results were further confirmed by performing a heatmap plot, which revealed a similar clustering pattern (Supplementary Figure S15A).

2.3.2. Unsupervised Multivariate PCA of the Aromatic 1H-NMR Region Data

For more sample classifications and metabolite marker determinations, PCA was performed for all samples limited to the more distinctive aromatic 1H-NMR region (δ 11.0–5.0 ppm). Such model (Supplementary Figure S16) showed better classification power than that of the full-range-based one with higher PC1 value (61%). As observed in full-range NMR, three distinct clusters were revealed in the PC1/PC2 scores plot (Supplementary Figure S16A), with Cicer specimens still being the most distant and located on the far-left side of the plot (negative PC1 values), whereas other sprouts were positioned at the right side (positive PC1). Vicia samples could be discriminated from Trigonella and Lens along PC2 (30% of total variance). The observed separation could be explained from the corresponding loading plot (Supplementary Figure S16B). In detail, high isoflavonoids (δ 6.99 and 7.49) content was detected in Cicer specimens contributing negatively to PC1, whereas L-Dopa (δ 6.61, 6.72, and 6.75) affected PC2 positively and was abundant in Vicia samples (Supplementary Figure S16B). Tryptophan (δ 7.33) showed less influential loading scores with positive effect on PC1, discriminating Lens and Trigonella sprouts (Supplementary Figure S16B). A similar clustering pattern was revealed from a heatmap plot (Supplementary Figure S15B), and in accordance with PCA results. Moreover, box plots’ results for isoflavonoids, l-Dopa, and tryptophan (Supplementary Figure S14), as the major discriminatory metabolites, were in agreement with the PCA results.

2.3.3. Supervised Multivariate OPLS-DA of 1H-NMR Data

In spite of the clear separation observed in both full and aromatic 1H-NMR-based PCA, legume metabolite markers were further confirmed by constructing several supervised OPLS-DA models. OPLS-DA is more potent in the identification of markers by providing the most relevant variables for the differentiation between two sample groups. First, Cicer samples were modelled against other sprout samples and analyzed using both 1H-NMR full region (δ 11.0–0.0 ppm) and aromatic region (δ 11.0–5.0 ppm) (Figure 4 and Supplementary Figure S17, respectively). The derived score plot showed a clear separation of Cicer from other samples, with variance coverage of R2 = 0.95 (full range) and 0.97 (aromatic range), and a prediction goodness parameter of Q2 = 0.94 (full range) and 0.97 (aromatic range) (Figure 4A and Supplementary Figure S17A). The corresponding derived S-plot (Figure 4B and Supplementary Figure S17B), showing the contributing 1H-NMR signals, revealed that Cicer was particularly rich in sucrose (δ 3.61 and 3.71) and isoflavonoids (δ 6.99, 7.49, 7.84, and 8.12–8.16), where axes plotted from the predictive component are the covariance p[1] against the correlation p(cor)[1].
The PCA and OPLS-DA clustering of 1H-NMR data of legume sprouts confirmed the unique metabolite profile of Cicer in both primary and secondary metabolites which had previously already appeared in UPLC-MS and GC-MS data analyses [28]. The results suggested Cicer sprouts as a good source of estrogenic isoflavones [52].
To confirm the metabolic marker of Trigonella, appearing on the far-left side of the PCA plot (Figure 3A), Trigonella sprout was modelled against the other sprout samples and analyzed using both 1H-NMR full-region data (δ 11.0–0.0 ppm) and aromatic-region data (δ 11.0–5.0 ppm) (Figure 5 and Supplementary Figure S18, respectively). The derived score plots revealed a clear discrimination between Trigonella and the remaining sprouts (Figure 5A and Supplementary Figure S18A). The corresponding S-plots (Figure 5B and Supplementary Figure S18B) showed that 4-hydroxy-isoleucine (δ 1.24), asparagine (δ 3.84), and trigonelline (δ 9.23 and 8.88) were abundant in Trigonella. The study confirmed that Trigonella sprouts exclusively contain 4-hydroxy-isoleucine in addition to being the richest in trigonelline alkaloid, both are suggested to mediate for the potential anti-diabetic and antihyperlipidemic actions of Trigonella sprouts [56,57]. This is in accordance with our previous UPLC-MS and GC-MS analyses [28] and further confirms 1H-NMR for absolute quantification (Table 2).
Vicia and Lens full-region 1H-NMR data (δ 11.0–0.0 ppm) and aromatic-region data (δ 11.0–5.0 ppm) were modelled against each other using OPLS-DA with derived score plots (R2 = 0.99 and Q2 = 0.99), showing a clear separation between both sample groups (Figure 6A and Supplementary Figure S19A). The corresponding derived S-plot (Figure 6B and Supplementary Figure S19B) showed that Vicia was particularly rich in sugars (δ 3.44–3.76 and 4.00–4.04), which, however, may depend on growing conditions, in addition to the exclusive and more specific presence of L-Dopa (δ 3.73, 3.75, and 6.61), whereas Lens was higher in acetate (δ 1.92), in agreement with 1H-NMR absolute quantification (Table 2). The study succeeded in distinguishing between Vicia and Lens samples and identification of each sample marker, along with confirmation of the exclusive presence of the anti-parkinsonism agent, L-Dopa, in Vicia samples, as previously revealed in UPLC-MS and GC-MS analyses [28].

3. Materials and Methods

3.1. Plant Material

Legume seeds: chickpea (Cicer arietinum L. cv. Giza 88), fenugreek (Trigonella foenum-greacum L. cv. Giza 2), fava (Vicia faba L. cv. Giza 3), and lentil (Lens esculenta L. cv. Sinai 1), were obtained from The Food Legumes Research Department, Field Crops Research Institute (FCRI), Agricultural Research Center (ARC), Giza, Egypt, in May 2014. The plants were cultivated in winter (early November 2013) and harvested fully ripe and dry in spring (late April 2014). Voucher specimens are kept at the Pharmacognosy Department Herbarium, Cairo University, Egypt.

3.2. Sprouting Procedures

The sprouting process was performed following the procedure described in Lv et al. [51]. In brief, 100 g of the dried seeds were soaked in 3 volumes of distilled water in glass containers for 8 h at 28 °C, followed by sprouting in glass dishes lined with cotton in the dark. The seeds were moistened with distilled water every 3 h during the germination process and washed twice daily for 3 days to avoid microbial growth. The seedlings were pinched, lyophilized, and then kept at −20 °C until further analysis. Sprouting was carried out in 3 independent biological replicates.

3.3. Chemicals and Reagents

Methanol-d4 (99.80% D) and hexamethyldisiloxane (HMDS) were purchased from Deutero GmbH (Kastellaun, Germany).

3.4. Extraction Procedure and Sample Preparation for NMR Analysis

A one-pot extraction protocol developed by Farag et al. [23] was employed for legume sprout extraction. The lyophilized and deep-frozen legume sprouts were ground with a pestle in a mortar under liquid nitrogen. The powder (120 mg) was homogenized with 5 mL 100% methanol using a Turrax mixer (11,000 RPM) 5 times for 20 s, with 1 min intervals to prevent heating. Extracts were then intensely vortexed and centrifuged at 3000× g for 30 min to remove sprout debris. 3 mL were aliquoted, and the solvent was evaporated under nitrogen until complete dryness. Dried extracts were resuspended with 800 μL 100% methanol-d4 containing HMDS (0.94 mM final concentration), and then centrifuged (13,000× g for 1 min). The supernatant was transferred to a 5 mm NMR tube. 3 biological replicates were analyzed under identical conditions for each specimen.

3.5. NMR Analysis

All spectra were recorded on an Agilent VNMRS 600 NMR spectrometer using a 5 mm inverse detection cryoprobe, and with the following parameters: frequency 599.83 MHz, digital resolution 0.367 Hz/point, pulse width 3 μs (45°), acquisition time 2.7 s, relaxation delay 23.7 s, number of transients 160, zero filling up to 128 K, and exponential window function with lb 0.4. 2D-NMR spectra were recorded using standard CHEMPACK 4.1 pulse sequences (gDQCOSY, gHSQCAD, gHMBCAD) implemented in Varian VNMRJ 2.2C spectrometer software. The heteronuclear single quantum coherence spectroscopy (HSQC) experiment was optimized for 1JCH = 146 Hz with DEPT (distortionless enhancement by polarization transfer)-like editing and 13C-decoupling. The heteronuclear multiple bond correlation (HMBC) experiment was optimized for a long-range coupling of 8 Hz, and a two-step 1JCH filter was used (130–165 Hz). Samples were randomly allocated in the sequence run.

3.6. NMR Quantification

For metabolite quantification using NMR spectroscopy, the peak areas of the internal standard (HMDS) and selected proton signals belonging to the target compounds were integrated manually for all samples. The following equation was applied for calculating metabolite concentrations (µg/mg dry matter):
m T = M T × I T I St × X St X T × C St × V St
mT: mass of the target compound (µg) in the solution used for 1H-NMR measurement,
MT: molecular weight of the target compound (g/mol),
IT: relative integral value of the 1H-NMR signal of the target compound,
ISt: relative integral value of the 1H-NMR signal of the standard compound,
XSt: number of protons belonging to the 1H-NMR signal of the standard compound,
XT: number of protons belonging to the 1H-NMR signal of the target compound,
CSt: concentration of internal standard (HMDS) in the solution used for 1H-NMR measurement (mmol/L),
VSt: volume of solution used for 1H-NMR measurement (mL).
Signals used for NMR quantification are listed in Supplementary Table S1.

3.7. NMR Data Processing and Multivariate Data Analysis

The methodology used in this study was applied following the protocol of Farag et al. [23]. Briefly, the 1H-NMR spectra were automatically Fourier-transformed to (.esp) files using ACD/NMR Manager lab version 10.0 software (Toronto, ON, Canada). Spectral intensities were reduced to integrated regions (buckets) of equal width, 0.04 ppm, within the region of δ = 11.4−0.4 ppm. PCA was performed with R package (2.9.2) using custom-written procedures after scaling to HMDS signal, as described elsewhere [58]. OPLS-DA was performed with the program SIMCA-P Version 13.0 (Umetrics, Umeå, Sweden). All variables were mean-centered and scaled to Pareto variance. To assess the validity of the NMR-based OPLS models, Q2 and R2 values of all calculated models were bigger than 0.4 and close to 1, with most models showing a regression line crossing zero, with negative Q2 and R2 close to 1, which signifies the model’s validation. Also, the p-values for each OPLS-DA model were calculated using CV-ANOVA (analysis of variance of cross-validated residuals) and were all below p-value of 0.005 (Supplementary Figures S20–S25).

3.8. Statistical Analysis

NMR quantification data were analyzed using the Co-Stat computer program (version 8, Monterey, CA, USA). Data are expressed as mean ± standard deviation (SD) of the groups. Differences between sample groups were compared by one-way analysis of variance (ANOVA) and were considered statistically significant when p ≤ 0.05.

4. Conclusions

This research provided the first NMR-based metabolite fingerprinting of 4 major legume sprouts, i.e., Cicer, Lens, Trigonella, and Vicia. A total of 32 compounds belonging to various metabolite classes were identified and quantified. PCA and OPLS-DA were used for exploring the variations and determining the main markers of each sprout to be utilized in samples’ authentication and future quality control. Trigonelline and 4-hydroxy-isoleucine were found more enriched in Trigonella versus higher isoflavonoids and sucrose abundance in Cicer sprout. Nevertheless, sucrose cannot be considered as a useful marker as it is both a primary metabolite and quantitatively strongly dependent on growth conditions. Vicia was characterized by the exclusive presence of L-Dopa versus acetate abundance in Lens. The aromatic region data (δ 11.0–5.0 ppm) provided a better classification model than the full-range NMR (δ 11.0–0.0 ppm) as legume sprout variations mainly originated from secondary metabolites, which can serve as chemotaxonomic markers.
Determination of the metabolite patterns at different sprouting stages should now follow to provide a better understanding of the role of these constituents in the sprouting process, and to identify the optimum time of harvest for a certain effect or metabolite enrichment level. Moreover, future work should now examine different varieties or seed origin for each legume seed to determine whether differences in sprout composition shall be observed and/or to identify accessions yielding highest targeted metabolite levels.

Supplementary Materials

The following are available online, Table S1. 1H-NMR signals used in major identified metabolites quantitative NMR analysis. Figure S1. Assignment of the 1H-NMR markers for compound 36 & 1113 signals using 1H-13C correlations observed in the HSQC spectrum of Vicia sprouts methanol extract. Peaks assigned in the spectrum are labeled as follows: Sucrose (3), fructose (4), α-glucose (5), β-glucose (6), asparagine (11), choline (12), and betaine (13). Figure S2. Assignment of the 1H-NMR markers for compound 1, 2, 79, 1112, 14, 2122 & 24 signals using 1H-13C correlations observed in the HSQC spectrum of Lens sprouts methanol extract. Peaks assigned in the spectrum are labeled as follows: ω-6 fatty acid (1), ω-3 fatty acid (2), alanine (7), valine (8), threonine (9), asparagine (11), choline (12), proline (14), 4-aminobutyric acid (21), acetic acid (22), and β-sitosterol (24). Figure S3. Assignment of the 1H-NMR markers for compound 12, 78, 11, 1314, 17 & 21 signals using 1H-13C correlations observed in the HMBC spectrum of Vicia sprouts methanol extract. Peaks assigned in the spectrum are labeled as follows: ω-6 fatty acid (1), ω-3 fatty acid (2), alanine (7), valine (8), asparagine (11), betaine (13), proline (14), l-Dopa (17), and 4-aminobutyric acid (21). Figure S4. Assignment of the 1H-NMR markers for compound 12, 78, 11, 1314, 17 & 21 signals using 1H-13C correlations observed in the HMBC spectrum of fava sprout methanol extract. Peaks assigned in the spectrum are labeled as follows: ω-6 fatty acid (1), ω-3 fatty acid (2), alanine (7), valine (8), asparagine (11), betaine (13), proline (14), l-dopa (17), and 4-aminobutyric acid (21). Figure S5. 1H-1H COSY spectrum of Vicia sprouts methanol extract showing correlations observed for compounds 12, 8, 14, & 22 that were used to confirm the assignment of their signals observed in 1H-NMR spectrum. Peaks assigned in the spectrum are labeled as follows: ω-6 fatty acid (1), ω-3 fatty acid (2), valine (8), proline (14), and 4-aminobutyric acid (21). Figure S6. Assignment of the 1H-NMR markers for compound 15, 1819 & 23 signals using 1H-13C correlations observed in the HMBC spectrum of Lens sprouts methanol extract. Peaks assigned in the spectrum are labeled as follows: Phenylalanine (15) tryptophan (18) histidine (19), and fumaric acid (23). Figure S7. Assignment of the 1H-NMR markers for compound 15, 16 & 18 & signals using 1H-13C correlations observed in the HSQC spectrum of Trigonella sprouts methanol extract. Peaks assigned in the spectrum are labeled as follows: Phenylalanine (15), tyrosine (16), and tryptophan (18). Figure S8. 1H-1H COSY spectrum of Vicia sprouts methanol extract showing correlations observed for compounds 1618, 20, & 2526 that were used to confirm the assignment of their signals observed in 1H-NMR spectrum. Peaks assigned in the spectrum are labeled as follows: Tyrosine (16), L-Dopa (17), tryptophan (18), cytosine (20), and trigonelline (25). Figure S9. Assignment of the 1H-NMR markers for trigonelline (25) signals using 1H-13C correlations observed in the HSQC spectrum of Trigonella sprouts methanol extract. Figure S10. Assignment of the proton markers for isoflavones (26-31) observed in the 1H-NMR spectrum of Cicer sprouts methanol extract. Figure S11. Assignment of the 1H-NMR markers for isoflavonoid 2632 signals using 1H-13C correlations observed in the HSQC spectrum of Cicer sprouts methanol extract. Peaks assigned in the spectrum are labeled as follows: Biochanin-A (26), genstin (27), malonyl-genstin (28), formononetin (29), daidzin (30), malonyl-daidzin (31), and cicerin (32). Figure S12. Assignment of the 1H-NMR markers for compound 18 & 2532 signals using 1H-13C correlations observed in the HMBC spectrum of Cicer sprouts methanol extract. Peaks assigned in the spectrum are labeled as follows: Tryptophan (18), trigonelline (25), biochanin-A (26), genistin (27), malonyl-genstin (28), formononetin (29), daidzin (30), malonyl-daidzin (31), and cicerin (32). Figure S13. The DModX plot of the PCA model in A. full (δ 11.0-0.0 ppm) and B. aromatic (δ 11.0-5.0 ppm) regions showing the moderate outliers (in red). Figure S14. Box plots showing peak intensities of sucrose, asparagine, 4-hydroxy-isoleucine, isoflavonoids, L-Dopa and tryptophan in spouts (average of 3 biological replicates). These metabolites were identified by NMR and are responsible for the differentiation in PCA (line = mean; box = standard error; whisker = standard deviation). C, Cicer; L, Lens; T, Trigonella; V, Vicia. Figure S15. Heatmap plots of sprout samples based on group average cluster analysis of NMR biochemical profiles for A. full (δ 11.0–0.0 ppm) and B. aromatic (δ 11.0-5.0 ppm) regions, (n = 3). The color keys and histograms show the distribution of metabolites across sprouts. Figure S16. 1H-NMR (δ 11.0–5.0 ppm) based principal component analysis of the four studied legume sprouts: Cicer (C), Lens (L), Trigonella (T), and Vicia (V) (n = 3). The clusters are located at distinct positions in two-dimensional space described by two vectors of principal component PC1 (0.61) and PC2 (0.30). (A) Score plot of PC1 vs. PC2 scores. (B) Loading plot for PC1 & PC2 contributing 1H-NMR signals and their assignments, with each metabolite denoted by its chemical shift (ppm). It should be noted that ellipses do not denote statistical significance but are rather added for better visibility of clusters discussed. For sample codes, refer to Table 1. Figure S17. 1H-NMR aromatic region (δ 11.0–5.0 ppm) based orthogonal projection to latent structures-discriminant analysis (OPLS-DA) of Cicer sprouts (●) modelled against the remaining legume sprouts (■) (n = 3). (A) OPLS-DA score plot (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolite identification using 1D- and 2D-NMR. Figure S18. 1H-NMR aromatic region (δ 11.0–5.0 ppm) based orthogonal projection to latent structures-discriminant analysis (OPLS-DA) of Trigonella sprouts (□) modelled against the remaining legume sprouts (∆) (n = 3). (A) OPLS-DA score plot (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolite identification using 1D- and 2D-NMR. Figure S19. 1H-NMR aromatic region (δ 11.0–5.0 ppm) based orthogonal projection to latent structures-discriminant analysis (OPLS-DA) of Vicia sprouts (■) modelled against Lens sprouts (∆) (n = 3). (A) OPLS-DA score plot (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolite identification using 1D- and 2D-NMR. Figure S20. OPLS-DA model validation for modelling Cicer sprouts against other sprouts based on 1H-NMR full region (δ 11.0–0.0 ppm) A. the diagnostic metrics R2 and Q2 B. permutation testing. n = 20, and C. CV-ANOVA to assess for model statistical significance. Figure S21. OPLS-DA model validation for modelling Cicer sprouts against other sprouts based on 1H-NMR aromatic region (δ 11.0–5.0 ppm) A. the diagnostic metrics R2 and Q2 B. permutation testing. n = 20, and C. CV-ANOVA to assess for model statistical significance. Figure S22. OPLS-DA model validation for modelling Trigonella sprouts against other sprouts based on 1H-NMR full region (δ 11.0–0.0 ppm) A. the diagnostic metrics R2 and Q2 B. permutation testing. n = 20, and C. CV-ANOVA to assess for model statistical significance. Figure S23. OPLS-DA model validation for modelling Trigonella sprouts against other sprouts based on 1H-NMR aromatic region (δ 11.0–5.0 ppm) A. the diagnostic metrics R2 and Q2 B. permutation testing. n = 20, and C. CV-ANOVA to assess for model statistical significance. Figure S24. OPLS-DA model validation for modelling Vicia sprouts against Lens sprouts based on 1H-NMR full region (δ 11.0–0.0 ppm) A. the diagnostic metrics R2 and Q2 B. permutation testing. n = 20, and C. CV-ANOVA to assess for model statistical significance. Figure S25. OPLS-DA model validation for modelling Vicia sprouts against Lens sprouts based on 1H-NMR aromatic region (δ 11.0–5.0 ppm) A. the diagnostic metrics R2 and Q2 B. permutation testing. n = 20, and C. CV-ANOVA to assess for model statistical significance.

Author Contributions

M.A.F. conceptualized the study; M.A.F. performed the analysis; M.A.F. and A.P. revised the metabolites identification; M.G.S.E.-D. and A.O. wrote the first draft; M.A.F., M.G.S.E.-D. performed the chemometry; M.A.F., M.A.S., S.F.A., A.I.O., A.P., and L.A.W. wrote and revised the final manuscript. All authors have read and agreed to the published version of the manuscript.

Funding

Mohamed A. Farag wishes to thank the American University in Cairo for a Research Support Grant (RSG1–18) and Alexander von Humboldt Foundation, Germany, for financial support.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Please Not applicable.

Data Availability Statement

Data is available from authors upon request.

Acknowledgments

Authors thank Naglaa Ammar and A.M.O. for performing statistical analysis.

Conflicts of Interest

The authors declare no conflict of interest.

Sample Availability

Samples of the compounds are not available.

Abbreviations

ANOVA, analysis of variance; COSY, correlation spectroscopy; DEPT, distortionless enhancement by polarization transfer; FAO, Food and Agriculture Organization; GC-MS, gas chromatography-mass spectrometry; HMDS, hexamethyldisiloxane; HMBC, heteronuclear multiple bond correlation; HSQC, heteronuclear single quantum coherence spectroscopy; LC-MS, liquid chromatography-mass spectrometry; MS, mass spectrometry; NAD, nicotinamide adenine dinucleotide; NMR, nuclear magnetic resonance; OPLS-DA, orthogonal projections to latent structures discriminant analysis; PCA, principal component analysis; UPLC-MS, ultra-performance liquid chromatography-mass spectrometry; WHO, World Health Organization.

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Figure 1. (A) 1H-NMR spectrum of legume sprout methanol extracts (C, Cicer; L, Lens; T, Trigonella; V, Vicia) showing characteristic signals for primary and secondary metabolites in the range δ 0.5–5.5 ppm, and (B) in the range δ 5.6–9.3 ppm. The identities of NMR peaks are listed in Table 1.
Figure 1. (A) 1H-NMR spectrum of legume sprout methanol extracts (C, Cicer; L, Lens; T, Trigonella; V, Vicia) showing characteristic signals for primary and secondary metabolites in the range δ 0.5–5.5 ppm, and (B) in the range δ 5.6–9.3 ppm. The identities of NMR peaks are listed in Table 1.
Molecules 26 00761 g001aMolecules 26 00761 g001b
Figure 2. Structure of the major primary and secondary metabolites detected in chickpea, lentil, fenugreek, and fava sprout methanol extracts. Carbon numbering system for each compound is based on analogy rather than IUPAC rules. Metabolite numbers follow those listed in Table 1 for metabolite identification using 1D- and 2D-NMR.
Figure 2. Structure of the major primary and secondary metabolites detected in chickpea, lentil, fenugreek, and fava sprout methanol extracts. Carbon numbering system for each compound is based on analogy rather than IUPAC rules. Metabolite numbers follow those listed in Table 1 for metabolite identification using 1D- and 2D-NMR.
Molecules 26 00761 g002
Figure 3. 1H-NMR (δ 11.0–0.0 ppm)-based principal component analysis (PCA) of the four studied legume sprouts: Cicer (C), Lens (L), Trigonella (T), and Vicia (V) (n = 3). The clusters are located at distinct positions in two-dimensional space described by two vectors of principal components PC1 (0.58) and PC2 (0.23). (A) Score plot of PC1 vs. PC2 scores. (B) Loading plot for PC1 and PC2 contributing 1H-NMR signals and their assignments, with each metabolite denoted by its chemical shift (ppm). It should be noted that ellipses do not denote statistical significance but are rather added for better visibility of clusters discussed. For sample codes, refer to Table 1.
Figure 3. 1H-NMR (δ 11.0–0.0 ppm)-based principal component analysis (PCA) of the four studied legume sprouts: Cicer (C), Lens (L), Trigonella (T), and Vicia (V) (n = 3). The clusters are located at distinct positions in two-dimensional space described by two vectors of principal components PC1 (0.58) and PC2 (0.23). (A) Score plot of PC1 vs. PC2 scores. (B) Loading plot for PC1 and PC2 contributing 1H-NMR signals and their assignments, with each metabolite denoted by its chemical shift (ppm). It should be noted that ellipses do not denote statistical significance but are rather added for better visibility of clusters discussed. For sample codes, refer to Table 1.
Molecules 26 00761 g003
Figure 4. Full-range 1H-NMR (δ 11.0–0.0 ppm)-based orthogonal projection to latent structures-discriminant analysis (OPLS-DA) of Cicer sprouts (●) modelled against the remaining legume sprouts (■) (n = 3). (A) OPLS-DA score plot and (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolite identification using 1D- and 2D-NMR.
Figure 4. Full-range 1H-NMR (δ 11.0–0.0 ppm)-based orthogonal projection to latent structures-discriminant analysis (OPLS-DA) of Cicer sprouts (●) modelled against the remaining legume sprouts (■) (n = 3). (A) OPLS-DA score plot and (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolite identification using 1D- and 2D-NMR.
Molecules 26 00761 g004
Figure 5. Orthogonal projection to latent structures-discriminant analysis (OPLS-DA) based on full-range 1H-NMR (δ 11.0–0.0 ppm) of Trigonella sprouts (□) modelled against the remaining legume sprouts (∆) (n = 3). (A) OPLS-DA score plot and (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolite identification using 1D- and 2D-NMR.
Figure 5. Orthogonal projection to latent structures-discriminant analysis (OPLS-DA) based on full-range 1H-NMR (δ 11.0–0.0 ppm) of Trigonella sprouts (□) modelled against the remaining legume sprouts (∆) (n = 3). (A) OPLS-DA score plot and (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolite identification using 1D- and 2D-NMR.
Molecules 26 00761 g005
Figure 6. Orthogonal projection to latent structures-discriminant analysis (OPLS-DA) based on full-range 1H-NMR (δ 11.0–0.0 ppm) of Vicia sprouts (■) modelled against Lens sprouts (∆) (n = 3). (A) OPLS-DA score plot and (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolites identification using 1D- and 2D-NMR.
Figure 6. Orthogonal projection to latent structures-discriminant analysis (OPLS-DA) based on full-range 1H-NMR (δ 11.0–0.0 ppm) of Vicia sprouts (■) modelled against Lens sprouts (∆) (n = 3). (A) OPLS-DA score plot and (B) loading plot derived from samples modelled against each other. The loading S-plot shows the covariance p[1] against the correlation p(cor)[1] of the variables of the discriminating component of the OPLS-DA model. Peak numbering follows those listed in Table 1 for metabolites identification using 1D- and 2D-NMR.
Molecules 26 00761 g006
Table 1. Resonance assignments with chemical shifts of constituents identified in 600 MHz 1H-NMR, HSQC, COSY, and HMBC spectra of legume sprout methanol extracts.
Table 1. Resonance assignments with chemical shifts of constituents identified in 600 MHz 1H-NMR, HSQC, COSY, and HMBC spectra of legume sprout methanol extracts.
IDMetaboliteAssignmentδ1H (ppm)δ13C in HSQC (ppm)δ1H in COSY (ppm)HMBC correlations δ13C (ppm)CLTV
1–2ω-6 and ω-3 Fatty acids(CH2)n1.27–1.39 (br. s)30.80.91 (t-CH3), 1.61 (H-3), 2.07 (allylic CH2)30.8 (CH2)n., 131.9 (olefinic C)++++
C-22.31 (m)35.51.61 (H-3)26.2 (C-3), 30.8 (CH2)n, 175.8 (C-1)
C-31.61 (m)26.22.31 (H-2), 1.33 (CH2)n30.8 (CH2)n, 35.5 (C-2), 175.8 (C-1)
Olefinic Cs5.30–5.38 (br. m)129–1322.77, 2.81 (bis-allylic CH2), 2.07 (allylic CH2)26.8 (bis-allylic CH2), 130.2 (olefinic C)
allylic CH22.05–2.09 (m)28.2–28.81.37 (CH2)n, 5.30–5.38 (olefinic Hs)14.9 (t-CH3), 30.8 (CH2)n, 130.2, 131.9 (olefinic Cs)
1ω-6 Fatty acidbis-allylic CH22.77 (t, J = 6.6 Hz)26.85.30–5.38 (olefinic Hs)130.2, 131.9 (olefinic Cs)
t-CH30.91 (t, J = 6.2 Hz)14.91.33 (CH2)n23.9 (ω-2 C)
2ω-3 Fatty acidbis-allylic CH22.81 (t, J = 6.9 Hz)26.85.30–5.38 (olefinic Hs)130.2, 131.9 (olefinic Cs)
t-CH30.97 (t, J = 7.5 Hz)14.92.07 (allylic CH2)22.1 (ω-2 C), 133.7 (olefinic C)
3SucroseC-15.39 (d, J = 3.8 Hz)94.53.42 (H-2)73.9 (C-2), 105.6 (C-2′)++++
C-23.42 (dd, J = 9.8, 3.8 Hz)73.95.39 (H-1), 3.71 (H-3)75.3 (C-3)
C-1′3.61 (s)64.7-79.9 (C-3′), 105.6 (C-2′)
4FructoseC-34.1078.64.03 (H-3)62.0 (C-1), 74.6 (C-4)++++
C-44.03 *74.64.10 (H-4)-
5α-GlucoseC-15.11 (d, J = 3.7 Hz)94.53.35 (H-2)73.2 (C-5), 74.7 (C-2)++++
C-23.35 (br. s)74.75.11 (H-1), 3.67 (H-3)-
6β-GlucoseC-14.48 (d, J = 7.8 Hz)97.93.13 (H-2)75.2 (C-2), 77.3 (C-3)++++
C-23.13 (dd, J = 7.8, 9.0 Hz)75.23.35 (H-3)77.3 (C-3)
7AlanineC-23.59 *51.91.4617.6 (C-3), 176.6 (C-1)++++
C-31.46 (d, J = 7.2 Hz)17.63.5951.9 (C-2), 176.6 (C-1)
8ValineC-23.42 *61.92.25 (H-3)19.6 (C-5), 30.7 (C-3)++++
C-32.25 (m)30.71.02 (H-4), 1.06 (H-5), 3.42 (H-2)180.2 (C-1)
C-41.02 (d, J = 7.0 Hz)18.22.25 (H-3)19.6 (C-5), 30.7 (C-3), 61.9 (C-2)
C-51.06 (d, J = 7.0 Hz)19.62.25 (H-3)18.2 (C-4), 30.7 (C-3), 61.9 (C-2)
9ThreonineC-23.18 *nd4.12 (H-3)-++++
C-34.12 *nd1.31 (H-4), 3.18 (H-2)174.0 (C-1)
C-41.31 *21.64.12 (H-3)62.6 (C-2), 67.7 (C-3)
104-Hydroxy-isoleucineC-23.81 (d, J = 5.5 Hz)58.71.82 (H-3)13.6 (C-6), 43.4 (C-3), 175.1 (C-1)--+-
C-31.82 (m)43.43.81 (H-2), 3.79 (H-4)13.6 (C-6), 22.9 (C-5), 58.7 (C-2), 72.0 (C-4), 175.1 (C-1)
C-43.79 *72.01.82 (H-3), 1.24 (H-5)58.7 (C-2), 72.0 (C-4),
C-51.24 (d, J = 6.3 Hz)22.93.79 (H-4)43.4 (C-3), 72.0 (C-4)
C-60.99 (d, J = 7.2 Hz)13.63.79 (H-4)43.4 (C-3), 58.7 (C-2), 72.0 (C-4)
11AsparagineC-2a2.72 (dd, J = 9.3, 17.0 Hz)36.23.84 (H-3)53.4 (C-3), 174.7, 176.4 (C-1 and C-4)++++
C-2b2.94 (dd, J = 3.6, 17.0 Hz)36.23.84 (H-3)53.4 (C-3), 174.7, 176.4 (C-1 and C-4)
C-33.84 *53.42.72 (H-2a), 2.94 (H-2b)36.2 (C-2), 174.7, 176.4 (C-1 and C-4)
12CholineN-(CH3)33.21 (s)55.4-55.4 (N-CH3), 69.3 (N-CH2)++++
N-CH23.47 *69.34.00 (O-CH2)55.4 (N-CH3), 69.3 (N-CH2), 57.3 (O-CH3)
O-CH24.00 *57.33.47 (N-CH2)-
13BetaineN-(CH3)33.27 (s)52.7-52.7 (N-CH3), 66.7 (C-2), 168.3 (CO)++++
N-CH323.83 (s)66.7-53.7 (N-CH3), 168.3 (CO)
14ProlineCO-173.6--++++
C-13.98 *62.02.11 (H-2)24.2 (C-3), 29.6 (C-2), 173.6 (CO)
C-22.11, 2.30 (m)29.63.98 (H-1)46.2 (C-4), 62.0 (C-1)
C-31.96 (m)24.23.25, 3.37 (H-4)46.2 (C-4), 62.0 (C-1)
C-43.25, 3.37 *46.11.96 (H-3)24.2 (C-3), 29.6 (C-2)
15PhenylalanineC-33.33 *38.80-55.9, (C-2), 131.5 (C-3′/C-5′), 138.5 (C-1′)-+++
C-4′7.33 *129.0-131.5 (C-3′/C-5′)
C-3′/C-5′7.33 *131.07.28 (H-2′/H-6′)138.5 (C-1′)
C-2′/C-6′7.28 (d, J = 6.7 Hz)129.07.33 (H-3′/H-5′)38.8 (C-3), 131.5 (C-3′/C-5′)
16TyrosineC-3′/C-5′6.76 *112.57.12 (H-2′/H-6′)--+++
C-2′/C-6′7.12 (d, J = 8.5 Hz)131.06.76 (H-3′/H-5′)36.6 (C-3), 157.7 (C-4′)
17L-DopaC-23.70 *56.62.86, 3.17 (H-3)120.9 (C-2′, C-6′), 173.6 (C-1)---+
C-3a2.86 (dd, J = 14.7, 9.0 Hz)36.63.70 (H-2)56.6 (C-2), 116.5 (C-5′), 120.9 (C-2′,C-6′), 127.9 (C-1′), 173.6 (C-1)
C-3b3.17 (dd, J = 14.7, 4.2 Hz)36.63.70 (H-2)56.6 (C-2), 116.5 (C-5′), 120.9 (C-2′,C-6′), 127.9 (C-1′), 173.6 (C-1)
C-2′6.73 (br. s)120.96.61 (H-6′)36.6 (C-3), 127.9 (C-1′), 145.5 (C-4′)
C-5′6.75 *116.56.61 (H-6′)36.6 (C-3), 120.9 (C-2′,C-6′), 127.9 (C-1′), 145.5 (C-4′)
C-6′6.61 (dd, J = 8.1, 2.1 Hz)120.96.73 (H-2′), 6.75 (H-5′)36.6 (C-3), 116.5 (C-5′), 145.5 (C-4′)
18TryptophanC-57.19 (s)125.7-109.9 (C-4), 129.2 (C-11), 138.9 (C-6)++++
C-77.33 *113.17.10 (H-8)121.1 (C-9), 129.2 (C-11)
C-87.10 (t, J = 7.8 Hz)123.07.33 (H-7)119.7 (C-10), 138.9 (C-6)
C-97.05 *121.17.63 (H-10)113.1 (C-7), 129.2 (C-11)
C-107.63 (d, J = 7.8 Hz)119.77.05 (H-9)123.0 (C-8), 138.9 (C-6)
19HistidineC-57.75 (s)136.5-134.2 (H-4), 117.0 (H-6)++++
C-67.01 (s)117.0-134.2 (H-4), 136.5 (H-5)
20CytosineC-55.70 (d, J = 8.7 Hz)97.18.01-++++
C-68.01 (d, J = 8.7 Hz)143.65.70156.4 (C-2), 167.0 (C-4)
214-Aminobutyric acidC-22.36 (t, J = 6.9 Hz)35.51.88 (H-3)24.9 (C-3), 41.4 (C-4), 180.2 (C-1)++++
C-31.88 (m)24.92.36 (H-2), 2.96 (H-4)35.2 (C-2), 41.4 (C-4), 180.2 (C-1)
C-42.96 *41.41.88 (H-3)24.9 (C-3), 35.2 (C-2)
22Acetic acidCH31.92 (s)22.8-174.0 (CO)-+--
23Fumaric acidC-2/C-36.67 (s)136.9-173.2 (C-1, C-4)++++
24β-SitosterolC-65.34 *123.0--++++
C-180.72 (s)14.9-41.4 (C-12), 44.0 (C-13), 58.9 (C-14)++++
C-191.02*20.2-143.3 (C-5)
C-26/C-270.83 *19.6-47.5 (C-24)
25TrigonellineC-29.23 (s)148.2-49.4 (N-CH3), 141.0 (C-3), 146.9 (C-4), 168.4 (CO)++++
C-48.91 (d, J = 8.1 Hz)146.98.07 (H-5)147.6 (C-6), 168.4 (CO)
C-58.07 (dd, J = 8.1, 6.2 Hz)129.08.91 (H-4), 8.88 (H-6)141.0 (C-3), 146.9 (C-4)
C-68.88 d (J = 6.2 Hz)147.68.07 (H-5)49.4 (N-CH3), 129.0 (C-5), 148.2 (C-2)
N-CH34.44 (s)49.4-147.6 (C-6)
26–31Isoflavone derivativesC-3′/C-5′6.99 *115.77.49 (H-3′/H-5′)124–128 (C-3, C-1′), 131.8 (C-2′/C-6′), 161.7 (C-4′)+---
C-2′/C-6′7.49 *132.36.99 (H-2′/H-6′)115.7 (C-3′/C-5′), 124–128 (C-3, C-1′), 161.7 (C-4′)
26–28Genistein derivativesC-28.08 (s)155.5-124–128 (C-3, C-1′), 160.9 (C-9), 182.9 (C-4)+---
8.17 (s)156.2-124–128 (C-3, C-1′), 159.9 (C-9), 183.7 (C-4)
8.20 (s)156.6-124–128 (C-3, C-1′), 159.9 (C-9), 183.7 (C-4)
29–31Daidzein derivativesC-28.15 (s)155.6-124–128 (C-3, C-1′), 159.9 (C-9), 179.3 (C-4)+---
8.23 (s)156.2-124–128 (C-3, C-1′), 179.3 (C-4)
8.27 (s)156.2-124–128 (C-3, C-1′), 159.9 (C-9), 179.3 (C-4)
26Biochanin-AC-66.23 (d, J = 2.1 Hz)101.26.35 (H-8)107.2 (C-10), 167.0 (C-7)+---
C-86.35 (d, J = 2.1 Hz)95.16.23 (H-6)101.2 (C-6), 160.9 (C-9), 167.0 (C-7)
O-CH33.83 (s)56.0-161.7 (C-4′)
27GenistinC-66.52 (d, J = 2.1 Hz)101.86.71 (H-8)96.5 (C-8), 109.0 (C-10), 164.6 (C-5)+---
C-86.71 (d, J = 2.1 Hz)96.56.52 (H-6)101.8 (C-6), 109.0 (C-10), 159.9 (C-9), 165.3 (C-7)
C-1″5.06 (d, J = 7.8 Hz)102.53.50 (H-2″)78.3 (C-2″), 165.3 (C-7)
28Malonyl-genistinC-66.50 (d, J = 2.3 Hz)101.86.72 (H-8)96.5 (C-8), 109.0 (C-10), 164.6 (C-5)+---
C-86.72 (d, J = 2.3 Hz)96.56.50 (H-6)101.8 (C-6), 109.0 (C-10), 159.9 (C-9), 165.3 (C-7)
Malonyl CH23.17 (s)42.1--
29FormononetinC-58.05 (d, J = 9.0 Hz)129.06.94 (H-6)160.9 (C-9), 165.3 (C-7), 179.3 (C-4)+---
C-66.94 (dd, J = 9.0, 2.3 Hz)117.06.86 (H-8), 8.05 (H-5)103.8 (C-8), 118.7 (C-10)
C-86.86 (d, J = 2.3 Hz)103.86.94 (H-6)117.0 (C-6), 118.7 (C-10), 160.9 (C-9), 165.3 (C-7)
O-CH33.83 (s)56.0-161.7 (C-4′)
30DaidzinC-58.14 (d, J = 8.7 Hz)129.07.25 (H-8)105.8 (C-8), 159.9 (C-9), 164.6 (C-7)+---
C-67.19 (dd, J = 8.7, 2.2 Hz)117.78.14 (H-5)105.8 (C-8), 164.4 (C-7)
C-87.25 (d, J = 2.2 Hz)105.87.19 (H-6), 8.14 (H-5)117.7 (C-6), 159.9 (C-9), 164.4 (C-7)
C-1″5.10 *102.53.52 (H-2″)78.3 (C-3″), 164.6 (C-7)
31Malonyl-daidzinC-67.22 (dd, J = 8.7, 2.2 Hz)117.78.14 (H-5)105.8 (C-8), 164.4 (C-7)+---
C-87.27 (d, J = 2.4 Hz)105.87.22 (H-6), 8.14 (H-5)117.7 (C-6), 159.9 (C-9), 164.4 (C-7)
Malonyl CH23.17 (s)42.1--
32CicerinOCH2O5.98 *103.2-150.3 (C-4′)+---
C-65.98 *94.5--
C-85.96 (br. s)91.9--
C-3′6.37 *98.5-150.3 (C-4′), 156.5 (C-2′)
C-6′6.80 *106.4-150.3 (C-4′), 156.5 (C-2′)
C, Cicer; L, Lens; T, Trigonella; V, Vicia; (+), present; (-), absent; nd, not detected; *, overlapped.
Table 2. 1H-NMR quantification of major primary and secondary metabolites in different samples of legume sprouts methanol extracts (C, Cicer; L, Lens; T Trigonella; V, Vicia). Values are expressed as μg/mg dry powder ± S.D (n = 3), see experimental section. Chemical shifts used for metabolite quantification were determined in methanol-d6 and expressed as relative values to HMDS (0.94 mM final concentration) Statistical analysis is carried out by one-way analysis of variance (ANOVA) where unshared letters between groups are the significance value at p ≤ 0.05.
Table 2. 1H-NMR quantification of major primary and secondary metabolites in different samples of legume sprouts methanol extracts (C, Cicer; L, Lens; T Trigonella; V, Vicia). Values are expressed as μg/mg dry powder ± S.D (n = 3), see experimental section. Chemical shifts used for metabolite quantification were determined in methanol-d6 and expressed as relative values to HMDS (0.94 mM final concentration) Statistical analysis is carried out by one-way analysis of variance (ANOVA) where unshared letters between groups are the significance value at p ≤ 0.05.
IDCompoundAmount µg/mg Dry Matter
CLTV
1ω-6 Fatty acid51.19 ± 4.58 a41.32 ± 4.26 bc38.16 ± 1.78 c47.77 ± 4.12 ab
2ω-3 Fatty acid20.12 ± 1.76 a11.96 ± 0.85 b21.69 ± 0.49 a13.00 ± 1.30 b
3Sucrose239.82 ± 6.98 a144.67 ± 5.87 c178.74 ± 3.39 b172.96 ± 7.80 b
4Fructose148.39 ± 3.67 a82.91 ± 2.50 d103.72 ± 1.55 b95.60 ± 3.81 c
5α-Glucose36.89 ± 5.11 c73.43 ± 5.28 b94.92 ± 1.76 a71.06 ± 7.58 b
6β-Glucose43.15 ± 3.33 c76.31 ± 5.11 b89.00 ± 7.70 a81.72 ± 4.15 ab
7Alanine31.46 ± 1.88 b23.51 ± 2.51 c44.59 ± 1.88 a25.01 ± 1.19 c
8Valine12.61 ± 0.63 b14.59 ± 0.95 a12.57 ± 0.75 b10.26 ± 0.83 c
104-Hydroxyisoleucine0.0 ± 0.0 b0.0 ± 0.0 b51.13 ± 3.53 a0.0 ± 0.0 b
11Asparagine61.05 ± 4.51 b73.46 ± 8.09 b93.43 ± 4.29 a72.71 ± 9.68 b
12Choline19.06 ± 0.54 a16.91 ± 1.09 b9.06 ± 0.20 c9.94 ± 0.95 c
13Betaine12.98 ± 0.62 b10.06 ± 0.87 bc5.06 ± 1.10 c109.16 ± 5.49 a
15Phenylalanine0.0 ± 0.0 b8.61 ± 0.62 a8.69 ± 0.94 a9.07 ± 1.45 a
16Tyrosine0.0 ± 0.0 c8.59 ± 0.53 b8.93 ± 0.68 b15.57 ± 2.69 a
17L-Dopa0.0 ± 0.0 b0.0 ± 0.0 b0.0 ± 0.0 b112.40 ± 13.16 a
18Tryptophan24.16 ± 5.02 a22.82 ± 3.70 a22.05 ± 2.32 a10.36 ± 2.99 b
19Histidine4.23 ± 0.25 c11.22 ± 1.77 a7.43 ± 1.91 b11.07 ± 1.77 a
20Cytosine9.39 ± 1.95 a6.16 ± 1.30 b5.53 ± 0.72 b7.30 ± 1.45 ab
22Acetic acid0.0 ± 0.0 b10.51 ± 0.46 a0.0 ± 0.0 b0.0 ± 0.0 b
23Fumaric acid2.18 ± 0.19 c2.51 ± 0.25 bc3.11 ± 0.16 a2.84 ± 0.34 ab
24β-Sitosterol8.95 ± 0.67 b10.12 ± 0.78 ab8.56 ± 1.03 b10.77 ± 0.90 a
25Trigonelline18.03 ± 0.97 b8.11 ± 1.02 d24.73 ± 1.02 a11.59 ± 1.34 c
26Biochanin A32.04 ± 2.12 a0.0 ± 0.0 b0.0 ± 0.0 b0.0 ± 0.0 b
27Genistin43.86 ± 4.87 a0.0 ± 0.0 b0.0 ± 0.0 b0.0 ± 0.0 b
28Malonyl-genistin78.88 ± 1.46 a0.0 ± 0.0 b0.0 ± 0.0 b0.0 ± 0.0 b
29Formononetin35.52 ± 2.00 a0.0 ± 0.0 b0.0 ± 0.0 b0.0 ± 0.0 b
30Daidzin49.27 ± 3.10 a0.0 ± 0.0 b0.0 ± 0.0 b0.0 ± 0.0 b
31Malonyl-daidzin80.22 ± 3.56 a0.0 ± 0.0 b0.0 ± 0.0 b0.0 ± 0.0 b
32Cicerin33.19 ± 2.84 a0.0 ± 0.0 b0.0 ± 0.0 b0.0 ± 0.0 b
C, Cicer; L, Lens; T, Trigonella; V, Vicia; (-), not detected.
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Farag, M.A.; Sharaf El-Din, M.G.; Selim, M.A.; Owis, A.I.; Abouzid, S.F.; Porzel, A.; Wessjohann, L.A.; Otify, A. Nuclear Magnetic Resonance Metabolomics Approach for the Analysis of Major Legume Sprouts Coupled to Chemometrics. Molecules 2021, 26, 761. https://doi.org/10.3390/molecules26030761

AMA Style

Farag MA, Sharaf El-Din MG, Selim MA, Owis AI, Abouzid SF, Porzel A, Wessjohann LA, Otify A. Nuclear Magnetic Resonance Metabolomics Approach for the Analysis of Major Legume Sprouts Coupled to Chemometrics. Molecules. 2021; 26(3):761. https://doi.org/10.3390/molecules26030761

Chicago/Turabian Style

Farag, Mohamed A., Mohamed G. Sharaf El-Din, Mohamed A. Selim, Asmaa I. Owis, Sameh F. Abouzid, Andrea Porzel, Ludger A. Wessjohann, and Asmaa Otify. 2021. "Nuclear Magnetic Resonance Metabolomics Approach for the Analysis of Major Legume Sprouts Coupled to Chemometrics" Molecules 26, no. 3: 761. https://doi.org/10.3390/molecules26030761

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