Search Results (22,977)

Background: Traditionally, wild jujube (Ziziphus jujuba Mill. var. spinosa (Bunge) Hu ex H. F. Chou) has been used to nourish the heart, calm the spirit, and arrest spontaneous sweating. Modern research confirms its broad pharmacological activities, including antioxidant, anti-inflammatory, neuroprotective, and cognitive-enhancing effects. This study aims to isolate and characterize the structure of jujube polysaccharides and evaluate their protective effects against oxidative stress damage in neural stem cells (NSCs). Methods: We successfully isolated and purified a novel pectin polysaccharide (ZJP-2) from wild jujube. Its structure was characterized in detail using high-performance liquid chromatography coupled with multi-angle laser light scattering and refractive index detection (HPLC-MALS-RI), high-performance anion exchange chromatography (HPAEC), gas chromatography–mass spectrometry (GC-MS), and nuclear magnetic resonance (NMR) spectroscopy. Results: Structural analysis revealed that ZJP-2 is a pectin heteropolysaccharide with a molecular weight of approximately 67.93 kDa. Its monosaccharide composition primarily includes galac-turonic acid (GalA), arabinose (Ara), rhamnose (Rha), galactose (Gal), and glucose (Glc). The backbone consists of α-GalA and rhamnose-galacturonic acid-I (RG-I) domains linked by (1→4)-glycosidic bonds. NMR spectroscopy further confirmed its glycosidic bond types. In activity assessment, our study demonstrated that ZJP-2 significantly alleviated DMNQ-induced oxidative stress damage in C17.2 neural stem cells. Its protective effect was achieved by reducing intracellular reactive oxygen species (ROS) levels and upregulating the mRNA expression of antioxidant genes associated with the signaling axis (p < 0.05). Moreover, ZJP-2 suppressed DMNQ-induced overexpression of Nestin and NeuN (p < 0.05), contributing to the maintenance of NSCs’ undifferentiated state and functional homeostasis. Conclusions: In conclusion, ZJP-2 possesses distinct structural characteristics and significant neuroprotective potential, supporting its development as a natural functional food or dietary supplement for preventing oxidative stress-related neural damage. Full article

Deubiquitinating enzymes (DUBs) play essential roles in diverse plant biological processes, yet the ovarian tumor proteases (OTUs), a major DUB subfamily, have not been systematically characterized in wheat, and their functions in grain development remain unclear. Here, we identified 49 OTU genes (TaOTUs) in the hexaploid wheat genome and classified them into four subfamilies based on phylogenetic relationships, with nomenclature assigned according to homology. TaOTU6-7B was highly expressed during early and mid-grain development and was responsive to gibberellin and jasmonic acid. Its expression differed significantly between large-grain wheat Pindong34 (PD34) and small-grain wheat MY11847 at 7 and 11 days after flowering. To elucidate its function, we used CRISPR/Cas9 to generate loss-of-function mutants by knocking out the three homoeologs (TaOTU6-7A, -7B, and -7D). These mutants exhibited significantly increased grain width and weight relative to wild type. Moreover, TaOTU6-7B directly interacted with TaUBC13, whose expression was markedly elevated in the TaOTU6 knockout background, suggesting that TaUBC13 may positively regulate wheat grain size. Collectively, this study establishes the TaOTU gene family in wheat, reveals TaOTU6 as a negative regulator of grain width and weight, and provides valuable genetic resources and a theoretical foundation for high-yield wheat breeding. Full article

Domestic cattle represent one of the most significant evolutionary successes in the history of human–animal mutualism. This review synthesizes evidence from paleogenomics and modern population genetics, particularly recent pangenome analyses, to reconstruct the comprehensive evolutionary trajectory of cattle. We outline the two domestication events: the emergence of taurine cattle (Bos taurus) in the Fertile Crescent (~10,500 years ago) and zebu cattle (Bos indicus) in the Indus Valley (~8000 years ago). Following domestication, cattle dispersed globally alongside human migration, resulting in a complex genetic mosaic shaped by introgression with wild relatives and extensive admixture between lineages. By integrating data from mitochondrial DNA, Y-chromosome haplotypes, and whole-genome sequencing of modern, ancient, and wild samples, we reconstruct the detailed global dispersal of cattle. Furthermore, we dissect the molecular mechanisms underlying phenotypic diversity, emphasizing how natural selection has driven environmental adaptation, how artificial selection has optimized production traits, and how the emerging bovine pangenome unveils “hidden” genetic variations critical for climate resilience and disease resistance. Ultimately, this review summarizes the origin, dispersal and genomic diversity of cattle, offering vital insights for the conservation of indigenous genetic resources and the advancement of molecular breeding strategies in the face of a changing global climate. Full article

Mycoplasma pneumoniae (M. pneumoniae) is the crucial factor of global acquired respiratory infections. Currently, there are no specific disease modification treatments or vaccines available, and the vaccine development for this pathogen lags behind due to the complexity and variability of its antigens. A novel vaccine with broad-spectrum characteristics is essential to provide comprehensive protection against continuously evolving wild-type strains. Here, a broad-spectrum muti-epitope vaccine against M. pneumoniae had been designed through immunoinformatics methods. To ensure its broad-spectrum, we generated consistent sequences from all the antigen proteins of different strains, and then identified potential T cell epitopes. The multi-epitope vaccine (MEV) of M. pneumoniae incorporated 16 CTLs and 7 HTLs from the HMW1–3 and p1 adhesin proteins, which comprised 458 amino acids with adjuvant. The vaccine evaluation showed that the MEV had ideal physicochemical properties, high antigenicity, high immunogenicity, and was non-toxic. Furthermore, there was a strong and stable binding interaction between this vaccine and the toll-like receptors, which could be supported by the normal mode analysis. Finally, codon optimization resulted in the optimal GC content and higher CAI value. The vaccine candidate is expected to induce strong cellular immune responses and may provide protective immunity against the pathogen. We provided a novel in silico vaccine design strategy for vaccine design, which could provide a technical framework for the development of vaccines against other pathogens. Full article

Background/Objectives: Chondrosarcoma, glioblastoma, acute myeloid leukemia, chronic lymphocytic leukemia, and cholangiocarcinoma cancers all contain mutations in the gene isocitrate dehydrogenase 2 (IDH2). The mutant IDH2 enzyme metabolizes alpha-ketoglutarate (αKG) into the potent oncometabolite D-2-hydroxyglutarate (D2HG) in the mitochondria of these cancers, leading to altered cellular metabolism. Emerging evidence suggests that mitochondrial transfer between cancer and recipient cells represents an important form of intercellular communication that may influence cellular metabolism. The presence of intercellular TNTs between IDH2-mutant chondrosarcoma cells motivated an investigation into mitochondria-associated physiological changes occurring during an intercellular exchange with immune cells. A mitochondrial transfer is a two-way process, and we hypothesized that mitochondria-associated material derived from IDH2-mutant chondrosarcoma cells is exchanged with normal cells through TNTs. We further hypothesized that disruption of the actin cytoskeleton will inhibit this transfer. Accordingly, our objectives were to (1) quantify the extent and directionality of the mitochondrial exchange between IDH2-mutant cells and wild-type cells and to modulate this process via cytoskeletal inhibitors, and (2) measure the metabolic changes associated with the coculture and mitochondrial exchange. Methods: IDH2-mutant chondrosarcoma cells were cocultured with immune cells in vitro to quantify the extent and directionality of the mitochondrial exchange, and cytochalasin B was used as a cytoskeletal inhibitor to disrupt actin-dependent transfer. Metabolic changes associated with coculture and mitochondrial exchange were assessed using Seahorse extracellular flux analysis. Results: The experimental data presented here demonstrate a bidirectional exchange of mitochondria-associated material between IDH2-mutant chondrosarcoma cells and immune cells in vitro, accompanied by metabolic alterations in both cell types. Conclusions: These findings advance our understanding of intercellular communication in the tumor microenvironment and provide a foundation for future studies examining the functional and therapeutic relevance of a mitochondrial exchange in IDH2-mutant cancers. Full article

Colletotrichum fructicola is the predominant pathogenic agent responsible for anthracnose in Camellia oleifera. RGS2 is a GTPase-activating protein that negatively regulates G-protein signaling by inactivating Gα subunits. In this study, we characterized the ortholog of CfRGS2 in C. fructicola to explore its pathogenic roles. Seven canonical RGS genes were identified through BLASTp and keyword searches. Conserved domains and subcellular localizations were predicted bioinformatically. A CfRGS2 knockout mutant was generated via overlap-PCR and PEG-mediated transformation, verified by PCR, and complemented by reintroducing the wild-type gene. Phenotypic characterization showed that the growth rates of mutants ΔCfrgs2-1 and ΔCfrgs2-2 were significantly reduced compared with those of the wild-type and complemented strains. On both PDA and minimal medium, the mutant strains exhibited significantly smaller colony diameters of 3.3 cm and 3.1 cm, respectively, relative to the control strains. Moreover, conidiation in the mutants was only 4% of that in the wild-type and complemented strains, and appressorium formation was reduced to 6%, with statistical analyses confirming high significance. Under cell wall stress induced by 400 μg/mL Congo red, the growth inhibition rates of ΔCfrgs2-1 and ΔCfrgs2-2 were 44% and 48%, respectively, significantly higher than those of the control strains. Pathogenicity assays demonstrated that the mutants failed to induce lesions on unwounded leaves and caused 47% and 30% smaller lesion areas on wounded apple fruits, respectively. In summary, C. fructicola possesses seven canonical RGS proteins that regulate G-protein signaling, among which CfRgs2 is implicated in growth, conidiation, the stress response to cell wall perturbation, and virulence. Full article

The gut microbiota plays a key role in the health of wild birds, reflecting the influence of diet, habitat, and social behavior. Migratory and highly gregarious species such as the yellow-headed blackbird (Xanthocephalus xanthocephalus) provide valuable opportunities to explore host–microbe–environment interactions within a One Health framework. During migration, birds are exposed to diverse environments and dietary sources, which can promote highly diverse intestinal microbial communities and facilitate transient acquisition of environmental microorganisms. Here, we present the first taxonomic characterization of the fecal bacterial microbiota of X. xanthocephalus in northern Mexico based on 16S rRNA gene sequencing of the V3–V4 region. In addition, we performed a conservative screening to assess whether any bacterial taxa tentatively assigned at the species level have been previously reported as human pathogens or as having potential zoonotic relevance. Fecal samples were collected noninvasively from communal roosts within an urban–agricultural landscape of the Comarca Lagunera region during a winter season. A highly diverse bacterial community (39 phyla, 369 families, and 1195 bacterial species) was identified. Firmicutes_D, Actinobacteriota, and Campylobacterota were the dominant phyla. Among the bacterial taxa tentatively assigned at the species level, only three have been reported to exhibit zoonotic potential in the literature; however, none corresponded to avian-adapted pathogens or bacterial species historically associated with major zoonotic outbreaks, and all were detected at very low relative abundances. Overall, our findings establish an initial microbiological baseline for X. xanthocephalus and underscore the role of migratory birds as indicators of environmental microbial dynamics rather than direct sources of zoonotic risk in semiarid regions of northern Mexico. Full article

The genus Auricularia holds significant ecological importance due to its role in wood decaying and notable economic value as both an edible and medicinal resource. This study investigates the diversity of Auricularia species in Colombian Andes using an integrative approach. Species identification was based on macromorphological and micromorphological characteristics, alongside molecular analyses employing ITS and LSU markers. A total of 184 sequences of 81 specimens and 30 species were used to construct a phylogenetic tree including RPB2 marker sequences taken from GenBank. The results revealed six Auricularia species in the Colombian Andes: A. subglabra, A. cornea, A. fuscosuccinea, A. nigricans, A. brasiliana, and the newly described A. ibaguensis. This study provides morphological descriptions, distribution records, and interspecific distinctions, aligning these taxa with four out of the five recognized Auricularia species complexes. Novel sequences deposited in GenBank enhance taxonomic resolution, particularly within the A. cornea complex. These findings contribute new insights into the taxonomy of Auricularia in the Colombian Andes and emphasize the need for further research on Neotropical species, which may show significant differences from taxa in other biogeographic regions. Full article

Owing to the asynchronous deposition of trace elements between paired left and right otoliths within individual fish, researchers must consciously and uniformly use only single otoliths (especially the left one) for microchemical studies. To ensure reliability of unilateral otolith data for inferring the same habitat experiences of individual fish, this study focused on Coilia nasus as a representative case to validate whether the microchemical composition was consistent between left and right sagittal otoliths. Electron probe microanalysis was employed to determine microchemical profiles of Sr and Ca in both otoliths of 20 wild C. nasus specimens of the same age. At the individual level, Sr/Ca ratios in corresponding micro-regions (e.g., core and edge) of bilateral otoliths showed highly significant positive correlations, with approximately 92.59% of paired comparisons showing no significant differences at equivalent life-history stages, demonstrating that microchemical signals recorded by either otolith are highly consistent in both spatial distribution and elemental concentration levels. This study provides evidence of fundamental concordance in microchemical composition between bilateral otoliths within an individual, providing critical references on the methodological foundation for reliably using either the left or right otolith in future studies on otolith microchemistry of fish population connectivity, migration characteristics, and life history reconstruction. Full article

Glycyrrhizic acid and its derivatives are a crucial class of glycoside terpenoids with significant pharmaceutical and food industry applications. The biotransformation of glycyrrhizin (GL) into glycyrrhetic acid 3-O-mono-β-D-glucuronide (GAMG) and glycyrrhetinic acid (GA) can enhance the production of these valuable compounds. This study aimed to develop strategies to improve the catalytic and operational stability of β-glucuronidase from wild-type Talaromyces pinophilus Li-93, previously known as Penicillium purpurogenum Li-3 (w-PGUS), for efficient GL hydrolysis. Whole cells of T. pinophilus Li-93 expressing w-PGUS were capable of directly converting GL into GAMG. To enhance enzyme stability and reusability, three polymeric supports including, polyurethane foam (PUF), loofah sponge (LS), and polyvinyl chloride (PVC), were evaluated for immobilization of w-PGUS from the fermentation medium. Among these, PUF was the most effective immobilization support, yielding higher immobilization efficiency, GAMG production, and biomass retention. Under optimized conditions (1% PUF, 1.5 g.L⁻¹ w-PGUS inoculum, pH 5.0, 36 °C, 180 rpm), the immobilized w-PGUS produced a final GAMG yield of 3.90 g.L⁻¹, achieving 67.10% immobilization efficiency within 72 h. The PUF-immobilized w-PGUS retained 37.51% of its initial activity after 10 repeated batch reactions, whereas free w-PGUS retained only 6.21%. Additionally, the storage stability of immobilized w-PGUS was significantly higher (40.22%) than that of free w-PGUS (14.74%) after 30 days. Immobilization slightly reduced the initial yield due to mass-transfer limits but enabled much higher cumulative GAMG production through improved stability and reusability. Full article

The neuronal cell adhesion molecule NrCAM is widely expressed in the nervous system across the lifespan and has important physiological functions in the development of neuronal circuits through axonal growth and guidance and formation and maintenance of synapses in the cortex. NrCAM gene polymorphisms are associated with vulnerability to neuropsychiatric disorders such as schizophrenia, as well as vulnerability to substance use disorders. We investigated the effects of acute and chronic stress and the effects of systemic administration of AMPAR antagonist CNQX and NMDAR antagonist MK-801 on delay discounting in male NrCAM knockout (KO) mice and their wild-type littermate controls (WT). Under the no-stress condition, no discounting differences were found. Acute stress increased discounting and impulsivity in WTs but not in NrCAM KO mice. Chronic stress increased discounting and impulsivity in both genotypes. CNQX increased impulsive choice in WT controls but not in NrCAM KOs; impulsive choice decreased in both genotypes after MK-801 administration. Relative to WTs, NrCAM KOs had more neuronal activation in the prelimbic and orbitofrontal cortices. In NrCAM KO mice, a low dose of MK-801 decreased neuronal activation in the ventral orbitofrontal cortex and increased activation in the accumbens shell and core. These results indicate differential effects of genotype, stress, and response to glutamatergic drugs and support a role for NrCAM in stress-induced behavioral alterations relevant to addiction and psychiatric disorders. Full article

The black carp (Mylopharyngodon piceus) is an ecologically and economically important freshwater fish native to China and neighbouring regions, but its wild stocks have declined sharply in recent decades. We analysed mitochondrial cytochrome b (Cyt b) sequences from 100 individuals collected in 2008–2009 from four Yangtze River, two Pearl River and one Red River populations to assess genetic diversity and structure as a pre-ban baseline for maternal lineages. Sixteen polymorphic sites defined 17 haplotypes, with a single dominant haplotype (Hap2) shared across all populations. Haplotype diversity was high but nucleotide diversity low, and neutrality tests together with mismatch-distribution analyses were consistent with a recent Late Pleistocene demographic expansion. Pairwise FST values ranged from negligible differentiation among middle–lower Yangtze populations to pronounced differentiation between the upstream Yangtze population (SS) and middle–lower populations and between the Yangtze and the combined Pearl–Red basins, whereas Pearl and Red River populations showed no significant divergence and high mitochondrial homogeneity, consistent with substantial historical connectivity. Overall, the Cyt b data indicate low mitochondrial diversity and shallow but significant inter-basin structuring, providing preliminary mtDNA-based evidence that Yangtze and Pearl–Red populations represent candidate conservation and management units, and highlighting the need for nuclear genomic markers and contemporary sampling to refine drainage-scale units and evaluate recent management effects. Full article

Background: Sudden unexpected death in epilepsy (SUDEP) causes significant mortality, affecting approximately 1 in 1000 people with epilepsy. Clinical and preclinical studies have identified severe seizures, bradycardia, apnea, severe postictal hypoxia, and sleep deficiency that emerge prior to SUDEP and thus may represent temporal biomarkers. The metabolic ketogenic diet (KD) therapy increases longevity in preclinical SUDEP models. Here, the hypothesis that KD therapy would determine whether the emergent sleep deficiency, bradycardia, apnea and/or hypoxemia persist as temporal biomarkers in preclinical SUDEP was tested. Methods: Kv1.1 knockout (KO) mice, a preclinical SUDEP model, and wild-type littermates were weaned onto a standard diet (SD) or treated with KD. In separate cohorts, approximately every 10 days, seizures and sleep architecture were recorded with electroencephalography–electromyography (EEG-EMG), heart rate was measured with noninvasive ECGenie, apnea was assessed with noninvasive airway mechanics, and blood O₂ saturation was measured with pulse oximetry. Data were aligned from the day of sudden death and analyzed retrospectively. Results: KD treatment significantly increased longevity and reduced seizures, reproducing previous studies. Using retrospective analyses from the day of death, KD treatment attenuated the emergence of (i) interictal intermittent bradycardia in the last 20 days of life, (ii) apnea, and (iii) intermittent hypoxemia in the last 10 days of life. In contrast, (iv) KD treatment did not rescue REM and NREM sleep deficiencies during the last 10 days of life. Conclusions: Our findings provide novel preclinical support for KD as a candidate therapy to attenuate seizure frequency and burden, bradycardia, apnea, and hypoxemia in SUDEP. In addition, sleep deficiency persisted as a potential temporal biomarker of preclinical SUDEP; however, causality will need to be tested in future studies. Full article

The distribution and genetic diversity of economically significant pathogens, including porcine reproductive and respiratory syndrome virus (PRRSV), porcine circovirus type 2 (PCV2), porcine circovirus type 3 (PCV3), and porcine parvovirus 1 (PPV1), across extensive Russian territory within wild boars that serve as reservoirs remain poorly characterized. This study aimed to conduct a molecular epidemiological survey of these viruses in wild boar populations. The samples of 476 wild boars, collected across Russia between 2021 and 2025, were tested by PCR for the detection of viral genomes. While PRRSV was not detected, we found high detection rates for PCV2 (34.9%), PCV3 (35.5%), and PPV1 (25.4%). For PCV2, the co-circulation of two genotypes, PCV2b (5/53) and PCV2d (48/53), was observed. All 29 PCV3 sequences belonged to the PCV3a genotype. For PPV1, the presence of the PPV1a, PPV1b, and PPV1d genotype, as well as unclassified isolates, was shown. Co-infection of different viruses was detected: PCV2/PCV3 (16.0%), PCV2/PPV1 (6.9%), PCV2/PCV3/PPV1 (6.9%), and PCV3/PPV1 (4.4%). This is the first comprehensive study that demonstrates the wide dissemination and genetic diversity of PCV2, PCV3, and PPV1 within the wild boar population in Russia and highlights their role as a potential reservoir in viral evolution and spread. Full article

Among various ethanologenic microorganisms, thermotolerant Zymomonas mobilis has emerged as a promising candidate for industrial ethanol production at elevated temperatures. However, the comparative fermentation efficiency and the underlying molecular mechanisms driving thermotolerance in newly developed strains remain largely unexplored, hindering their industrial application. In this study, the recently developed thermotolerant strains Z. mobilis 200M and Z. mobilis PYK exhibited critical high temperatures for growth approximately 2.0 and 2.5 °C higher than the wild-type, respectively. While 40 °C represents severe heat stress that completely inhibits the growth of the wild-type, the thermotolerant strains remained viable, exhibiting significantly shorter cell lengths under these conditions. This study provides the first evidence of their superior multi-stress tolerance toward heat, ethanol, acetic acid, formic acid, and H₂O₂. Furthermore, the thermotolerant strains exhibited significantly higher ethanol fermentation efficiencies than the wild-type. At 40 °C, Z. mobilis 200M produced approximately 5.8-fold and 3.0-fold more ethanol than the wild-type after 24 and 48 h, respectively, while Z. mobilis PYK yielded 6.4-fold and 3.1-fold increases. Novel transcriptional insights via RT-qPCR revealed the simultaneous overexpression of genes involved in ethanol production, protein quality control, and signal transduction, particularly during the exponential phase under heat stress. Collectively, these findings bridge the gap between strain development and molecular understanding, suggesting that the coordinated upregulation of these genetic pathways enhances the adaptive capacity and fermentation efficiency of these thermotolerant strains during sustained growth at 40 °C. Full article