Search Results (9)

The Guaymas Basin in the Gulf of California is characterized by active seafloor spreading, the rapid deposition of organic-rich sediments, steep geothermal gradients, and abundant methane of mixed thermogenic and microbial origin. Subsurface sediment samples from eight drilling sites with distinct geochemical and thermal profiles were selected for DNA extraction and PCR amplification to explore the diversity of methane-cycling archaea in the Guaymas Basin subsurface. We performed PCR amplifications with general (mcrIRD), and ANME-1 specific primers that target the alpha (α) subunit of methyl coenzyme M reductase (mcrA). Diverse ANME-1 lineages associated with anaerobic methane oxidation were detected in seven out of the eight drilling sites, preferentially around the methane-sulfate interface, and in several cases, showed preferences for specific sampling sites. Phylogenetically, most ANME-1 sequences from the Guaymas Basin subsurface were related to marine mud volcanoes, seep sites, and the shallow marine subsurface. The most frequently recovered methanogenic phylotypes were closely affiliated with the hyperthermophilic Methanocaldococcaceae, and found at the hydrothermally influenced Ringvent site. The coolest drilling site, in the northern axial trough of Guaymas Basin, yielded the greatest diversity in methanogen lineages. Our survey indicates the potential for extensive microbial methane cycling within subsurface sediments of Guaymas Basin. Full article

The annual occurrence of harmful algal blooms (HABs) of the dinoflagellate Gymnodinium catenatum in the northern Gulf of California (NGC) during winter and spring has negative ecological, economic, and social impacts on the local coastal population. G. catenatum produces paralytic shellfish toxins, and a robust monitoring program of the species is necessary to sustain mitigation actions against their detrimental effects. Here, we applied the maximum-likelihood classification (MLC) method to classify satellite images from MODIS and Sentinel-3 to evaluate their effectiveness to detect G. catenatum. Different classes associated with the presence of the species were developed from data of two HABs that occurred in 2015 and 2017. Two classes derived from Sentinel-3 data from the 2017 HAB allowed the detection of this species. These Sentinel-3 classes adequately represented the temporal and geographical distribution of G. catenatum in the region and the no-bloom condition during the summer. The concordance between the detection of the Sentinel-3 classes on the west coast of the NGC and the recorded presence of G. catenatum (75% of concordance) in the area indicates that the MLC method could be applied for early detection of the species in the NGC, using Sentinel-3 full resolution images. Full article

The spionid polychaete Polydora hoplura Claparède, 1868 is a shell borer widely occurring across the world and considered introduced in many areas. It was originally described in the Gulf of Naples, Italy. Adult diagnostic features are the palps with black bands, prostomium weakly incised anteriorly, caruncle extending to the end of chaetiger 3, short occipital antenna, and heavy sickle-shaped spines in the posterior notopodia. The Bayesian inference analysis of sequence data of four gene fragments (2369 bp in total) of the mitochondrial 16S rDNA, nuclear 18S, 28S rDNA and Histone 3 has shown that worms with these morphological features from the Mediterranean, northern Europe, Brazil, South Africa, Australia, Republic of Korea, Japan and California are genetically identical, form a well-supported clade, and can be considered conspecific. The genetic analysis of a 16S dataset detected 15 haplotypes of this species, 10 of which occur only in South Africa. Despite the high genetic diversity of P. hoplura in South Africa, we tentatively propose the Northwest Pacific, or at the most the Indo–West Pacific, as its home region, not the Atlantic Ocean or the Eastern Pacific Ocean. The history of the discovery of P. hoplura around the world appears to be intimately linked to global shipping commencing in the mid-19th century, followed by the advent of the global movement of commercial shellfish (especially the Pacific oyster Magallana gigas) in the 20th century, interlaced with continued, complex dispersal by vessels and aquaculture. Given that P. hoplura has been detected in only a few of the 17 countries where Pacific oysters have been established, we predict that it may already be present in many more regions. As global connectivity through world trade continues to increase, it is likely that novel populations of P. hoplura will continue to emerge. Full article

Oceanic mesoscale events such as eddies, coastal upwelling, filaments and fronts created by water mass intrusion present properties allowing them to concentrate, transport and disperse salt, nutrients and plankton, among other important constituents in the ocean. The use of satellite images enables the continuous monitoring of the ocean dynamics at different temporal and spatial scales, aiding the study of its variability. This study focuses on the identification of these mesoscale events in the Gulf of California (GC) by means of sea surface temperature (SST) and chlorophyll a (Chl a) fronts (edge) detection by processing 5-day satellite images from the 1998–2019 period. The annual occurrence or frequency and duration of each event was identified; the interannual variability was evaluated and underlying correlations with the Multivariate El Niño Index (MEI) and the Pacific Decadal Index (PDOI) were assessed via Principal Component Analysis. Most events showed a seasonal variability due to the seasonal behavior of forcing agents (i.e., Pacific Ocean and winds) that stimulate their formation or presence in the GC; seasonality was more evident in the northern region than in the southern region. The interannual variability of their frequency or duration was associated with strong and intense El Niño and La Niña conditions (positive or negative MEI values) together with positive or negative phases of the PDOI. The use of SST and Chl a satellite images with a 5-day temporal resolution allowed to better identify and quantify the annual frequency and duration of each mesoscale event. It allowed to detect a seasonal behavior of these events in the northern region, followed by the central region. The southern region, due to the interaction of different water masses with unique characteristics, exhibited a less evident seasonality in the frequency of eddies, and no apparent association between their interannual frequency and duration with the MEI and PDOI. Constantly monitoring these oceanic events and their variability will help in the understanding of how the different regions of this large marine ecosystem respond to these variations in the long term. Full article

The Gulf of California has many regions of potential tidal-stream energy that have been identified and characterized using in-situ measurements and numerical ocean models. The Midriff Islands region has received particular attention due to its increased current speeds and high kinetic energy. This increase in energy can be seen in the formation of internal wave packets propagating for several hundred kilometers. Here we present a brief description of internal wave measurements travel towards the Northern Gulf and explore energy generation sites. In this paper we characterize the tidal inflow and outflow that passes throughout the Midriff Islands in the central part of the Gulf. We use a three-dimensional numerical ocean model that adequately reproduces the tidal flow and the increase in speed and kinetic energy between the islands. The current flow structure shows the highest velocity cores near the shore and far from the bottom. During the rising tide, the maximum current flow (~0.6 ms⁻¹) was found between Turón Island and San Lorenzo Island, from the surface to 200 m depth. When the currents flowed out of the Gulf, during the falling tide, the maximum negative current (−0.8 ms⁻¹) was found between Tiburon Island and Turón Island, from near the surface to 80 m depth. Although there are favorable conditions for power generation potential by tidal flows, the vertical variability of the current must be considered for field development and equipment installation sites. Full article

The 450-m long spit that extends westward from the northwest corner of Isla San Luis Gonzaga is one of the largest and most complex constructions of unconsolidated cobbles and boulders found anywhere in Mexico’s Gulf of California. The material source derives from episodic but intense storm erosion along the island’s andesitic cliff face with steep northern exposures. A well-defined marine terrace from the late Pleistocene cuts across the same corner of the island and provides a marker for the subsequent development of the spit that post-dates tectonic-eustatic adjustments. A total of 660 individual andesite clasts from seven transects across the spit were measured for analyses of change in shape and size. These data are pertinent to the application of mathematical formulas elaborated after Nott (2003) and subsequent refinements to estimate individual wave heights necessary for lift from parent sea cliffs and subsequent traction. Although the ratio of boulders to clasts diminishes from the proximal to distal end of the structure, relatively large boulders populate all transects and the average wave height required for the release of joint-bound blocks at the rocky shore amounts to 5 m. Based on the region’s historical record of hurricanes, such storms tend to decrease in intensity as they migrate northward through the Gulf of California’s 1100-km length. However, the size and complexity of the San Luis Gonzaga spit suggests that a multitude of extreme storm events impacted the island in the upper gulf area through the Holocene time, yielding a possible average growth rate between 7 and 8 m/century over the last 10,000 years. In anticipation of future storms, a system to track the movement of sample boulders should be emplaced on the San Luis Gonzaga spit and similar localities with major coastal boulder deposits. Full article

Numerical simulations revealed a profound interaction between the severe dust storm of 2007 caused by Santa Ana winds and the Gulf of California. The weather research and forecasting model coupled with a chemistry module (WRF-CHEM) and the hybrid single-particle Lagrangian integrated trajectory model (HYSPLIT) allowed for the estimation of the meteorological and dynamic aspects of the event and the dust deposition on the surface waters of the Gulf of California caused by the erosion and entrainment of dust particles from the surrounding desert regions. The dust emission rates from three chosen areas (Altar desert, Sonora coast, and a region between these two zones) and their contribution to dust deposition over the Gulf of California were analyzed. The Altar Desert had the highest dust emission rates and the highest contribution to dust deposition over the Gulf of California, i.e., it has the most critical influence with 96,879 tons of emission and 43,539 tons of dust deposition in the gulf. An increase of chlorophyll-a concentrations is observed coinciding with areas of high dust deposition in the northern and western coast of the gulf. This kind of event could have a significant positive influence over the mineralization and productivity processes in the Gulf of California, despite the soil loss in the eroded regions. Full article

Two semi-analytical algorithms, Generalized Inherent Optical Property (GIOP) and Garver-Siegel-Maritorena (GSM), were evaluated in terms of how well they reproduced the absorption coefficient of phytoplankton (a_ph(λ)) and dissolved and detrital organic matter (a_dg(λ)) at three wavelengths (λ of 412, 443, and 488 nm) in a zone with optically complex waters, the Upper Gulf of California (UGC) and the Northern Gulf of California (NGC). In the UGC, detritus determines most of the total light absorption, whereas, in the NGC, chromophoric dissolved organic material (CDOM) and phytoplankton dominate. Upon comparing the results of each model with a database assembled from four cruises done from spring to summer (March through September) between 2011 and 2013, it was found that GIOP is a better estimator for a_ph(λ) than GSM, independently of the region. However, both algorithms underestimate in situ values in the NGC, whereas they overestimate them in the UGC. Errors are associated with the following: (a) the constant a*_ph(λ) value used by GSM and GIOP (0.055 m² mgChla⁻¹) is higher than the most frequent value observed in this study’s data (0.03 m² mgChla⁻¹), and (b) satellite-derived chlorophyll a concentration (Chla) is biased high compared with in situ Chla. GIOP gave also better results for the a_dg(λ) estimation than GSM, especially in the NGC. The spectral slope S_dg was identified as an important parameter for estimating a_dg(λ), and this study’s results indicated that the use of a fixed input value in models was not adequate. The evaluation confirms the lack of generality of algorithms like GIOP and GSM, whose reflectance model is too simplified to capture expected variability. Finally, a greater monitoring effort is suggested in the study area regarding the collection of in situ reflectance data, which would allow explaining the effects that detritus and CDOM may have on the semi-analytical reflectance inversions, as well as isolating the possible influence of the atmosphere on the satellite-derived water reflectance and Chla. Full article

Studies on the population genetics, phylogenetic relationships, systematics and evolution of arthropods that inhabit necrotic tissue of cacti in the Sonoran Desert of North America are reviewed. These studies have focused upon several species of insects (orders Diptera and Coleoptera) and arachnids (order Pseudoscorpiones). For most taxa studied, little genetic structure and high dispersal ability are found in populations inhabiting the mainland and Baja California peninsula regions of the Sonoran Desert, consistent with the availability of the rotting cactus microhabitat which is patchily distributed and ephemeral. There is evidence, however, that the Gulf of California, which bisects the Sonoran Desert, has played a role in limiting gene flow and promoting speciation in several taxa, including histerid beetles, whereas other taxa, especially Drosophila nigrospiracula and D. mettleri, apparently are able to freely cross the Gulf, probably by taking advantage of the Midriff Islands in the northern Gulf as dispersal “stepping stones”. Genetic evidence has also been found for historical population expansions dating to the Pleistocene and late Pliocene in several taxa. Overall, these studies have provided important insights into how arthropods with different life history traits, but generally restricted to a necrotic cactus microhabitat, have evolved in an environmentally harsh and tectonically active region. In addition, they suggest some taxa for further, and more detailed, hypothesis driven studies of speciation. Full article