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Keywords = non-ionized ammonia

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21 pages, 2467 KiB  
Article
Chronic Ammonia Stress in Chinese Perch (Siniperca chuatsi): Oxidative Response, Nitrogen Metabolism, and Multi-Enzyme-Mediated Molecular Detoxification Defense Mechanisms
by Yan Li, Ru Yang, Minghui He, Jianmei Su and Liwei Liu
Antioxidants 2025, 14(7), 768; https://doi.org/10.3390/antiox14070768 - 22 Jun 2025
Cited by 1 | Viewed by 483
Abstract
Chinese perch (Siniperca chuatsi), an economically important freshwater fish in China, faces ammonia nitrogen stress under high-density aquaculture. This study investigated chronic ammonia nitrogen exposure effects on juvenile fish (95 ± 5 g) to establish safe concentration. Acute toxicity tests revealed [...] Read more.
Chinese perch (Siniperca chuatsi), an economically important freshwater fish in China, faces ammonia nitrogen stress under high-density aquaculture. This study investigated chronic ammonia nitrogen exposure effects on juvenile fish (95 ± 5 g) to establish safe concentration. Acute toxicity tests revealed a 96 h-LC50 of 12.91 mg/L ammonia nitrogen, with a safe concentration of 1.29 mg/L ammonia nitrogen (non-ionic ammonia: 0.097 mg/L). In 28-day chronic experiments with ammonia nitrogen levels at 0, 0.61, 1.29, and 2.58 mg/L, ammonia nitrogen induced hepatic oxidative stress, with total superoxide dismutase, catalase, and glutathione peroxidase activities and malondialdehyde content increasing proportionally to ammonia nitrogen concentration initially but declining over time. Concurrently, gill Na+-K+-ATPase activity was significantly suppressed, while the gene expression of ammonia transporters (rhag, rhbg, and rhcg) exhibited ammonia nitrogen concentration-dependent upregulation, inversely correlated with the exposure duration. Histological gill damage intensified at higher concentrations. Hepatic ammonia detoxification enzymes activities (asparagine synthase, glutamine synthetase, and glutamate dehydrogenase) and glutamine accumulation increased with ammonia nitrogen levels, aligning with gene expression trends, though enzyme activity diminished over time. Serum alanine aminotransferase and aspartate aminotransferase activities and their gene expressions rose with ammonia nitrogen levels, while total protein declined. These findings demonstrate that chronic ammonia nitrogen stress disrupts antioxidant capacity, osmoregulation, and nitrogen metabolism, compelling Chinese perch to mitigate toxicity via glutamine synthesis. To ensure sustainable aquaculture, ammonia nitrogen levels should remain below 1.29 mg/L under adequate dissolved oxygen conditions. Full article
(This article belongs to the Special Issue The Role of Oxidative Stress in Aquaculture)
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16 pages, 1686 KiB  
Article
Trace Detection of Di-Isopropyl Methyl Phosphonate DIMP, a By-Product, Precursor, and Simulant of Sarin, Using Either Ion Mobility Spectrometry or GC-MS
by Victor Bocoș-Bințințan, Paul-Flaviu Bocoș-Bințințan, Tomáš Rozsypal and Mihail Simion Beldean-Galea
Toxics 2025, 13(2), 102; https://doi.org/10.3390/toxics13020102 - 28 Jan 2025
Cited by 1 | Viewed by 1108
Abstract
Di-isopropyl methyl phosphonate (DIMP) has no major commercial uses but is a by-product or a precursor in the synthesis of the nerve agent sarin (GB). Also, DIMP is utilized as a simulant compound for the chemical warfare agents sarin and soman in order [...] Read more.
Di-isopropyl methyl phosphonate (DIMP) has no major commercial uses but is a by-product or a precursor in the synthesis of the nerve agent sarin (GB). Also, DIMP is utilized as a simulant compound for the chemical warfare agents sarin and soman in order to test and calibrate sensitive IMS instrumentation that warns against the deadly chemical weapons. DIMP was measured from 2 ppbv (15 μg m−3) to 500 ppbv in the air using a pocket-held ToF ion mobility spectrometer, model LCD-3.2E, with a non-radioactive ionization source and ammonia doping in positive ion mode. Excellent sensitivity (LoD of 0.24 ppbv and LoQ of 0.80 ppbv) was noticed; the linear response was up to 10 ppbv, while saturation occurred at >500 ppbv. DIMP identification by IMS relies on the formation of two distinct peaks: the monomer M·NH4+, with a reduced ion mobility K0 = 1.41 cm2 V−1 s−1, and the dimer M2·NH4+, with K0 = 1.04 cm2 V−1 s−1 (where M is the DIMP molecule); positive reactant ions (Pos RIP) have K0 = 2.31 cm2 V−1 s−1. Quantification of DIMP at trace levels was also achieved by GC-MS over the concentration range of 1.5 to 150 μg mL−1; using a capillary column (30 m × 0.25 mm × 0.25 μm) with a TG-5 SilMS stationary phase and temperature programming from 60 to 110 °C, DIMP retention time (RT) was ca. 8.5 min. The lowest amount of DIMP measured by GC-MS was 1.5 ng, with an LoD of 0.21 μg mL−1 and an LoQ of 0.62 μg mL−1 DIMP. Our results demonstrate that these methods provide robust tools for both on-site and off-site detection and quantification of DIMP at trace levels, a finding which has significant implications for forensic investigations of chemical agent use and for environmental monitoring of contamination by organophosphorus compounds. Full article
(This article belongs to the Section Drugs Toxicity)
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21 pages, 4952 KiB  
Article
Predicting the Influence of Ammonium Toxicity Levels in Water Using Fuzzy Logic and ANN Models
by Yuliia Trach, Roman Trach, Pavlo Kuznietsov, Alla Pryshchepa, Olha Biedunkova, Agnieszka Kiersnowska and Ihor Statnyk
Sustainability 2024, 16(14), 5835; https://doi.org/10.3390/su16145835 - 9 Jul 2024
Cited by 20 | Viewed by 2676
Abstract
The study aimed to address the complex and critical issue of surface water quality monitoring by proposing a diversified approach that incorporates a range of chemical indicators. (1) Background: the purpose of the study was to address the problem of surface water quality [...] Read more.
The study aimed to address the complex and critical issue of surface water quality monitoring by proposing a diversified approach that incorporates a range of chemical indicators. (1) Background: the purpose of the study was to address the problem of surface water quality monitoring in relation to the toxic effects of ammonium on aquatic ecosystems by developing predictive models using fuzzy logic and artificial neural networks. (2) Water samples from the Styr River, influenced by the Rivne Nuclear Power Plant, were analyzed using certified standard methods and measured parameters, while fuzzy logic and artificial neural network models, including Mamdani’s algorithm and various configurations of activation functions and optimization algorithms, were employed to assess water quality and predict ammonium toxicity. (3) A fuzzy logic system was developed to classify water quality based on ammonia content and other parameters, and six Artificial Neural Network (ANN) models were tested, with the ANN#2 model (using ReLU activation and ADAM optimizer) showing the best performance. (4) This study emphasizes the critical need for precise monitoring and modeling of total ammonium in surface water, considering its variable toxicity and interactions with environmental factors, to effectively protect aquatic ecosystems, namely ichthyofauna. Full article
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16 pages, 823 KiB  
Article
Calculation of DC Stark Resonances for the Ammonia Molecule
by Patrik Pirkola and Marko Horbatsch
Molecules 2024, 29(7), 1543; https://doi.org/10.3390/molecules29071543 - 29 Mar 2024
Cited by 1 | Viewed by 955
Abstract
A model potential previously developed for the ammonia molecule is treated in a single-center partial-wave approximation in analogy with a self-consistent field method developed by Moccia. The latter was used in a number of collision studies. The model potential is used to calculate [...] Read more.
A model potential previously developed for the ammonia molecule is treated in a single-center partial-wave approximation in analogy with a self-consistent field method developed by Moccia. The latter was used in a number of collision studies. The model potential is used to calculate DC Stark resonance parameters, i.e., resonance positions and shifts using the exterior complex scaling method for the radial coordinate. Three molecular valence orbitals are investigated for fields along the three Cartesian coordinates, i.e., along the molecular axis and in two perpendicular directions. The work extends previous work on the planar-geometry water molecule for which non-monotonic shifts were observed. We find such non-monotonic shifts for fields along the molecular axis. For perpendicular fields, we report the splitting of the 1e orbitals into a fast- and a slow-ionizing orbital. Full article
(This article belongs to the Section Computational and Theoretical Chemistry)
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21 pages, 4650 KiB  
Article
Measurement of Light-Duty Vehicle Exhaust Emissions with Light Absorption Spectrometers
by Barouch Giechaskiel, Anastasios Melas, Jacopo Franzetti, Victor Valverde, Michaël Clairotte and Ricardo Suarez-Bertoa
Technologies 2024, 12(3), 32; https://doi.org/10.3390/technologies12030032 - 28 Feb 2024
Cited by 3 | Viewed by 2884
Abstract
Light-duty vehicle emission regulations worldwide set limits for the following gaseous pollutants: carbon monoxide (CO), nitric oxides (NOX), hydrocarbons (HCs), and/or non-methane hydrocarbons (NMHCs). Carbon dioxide (CO2) is indirectly limited by fleet CO2 or fuel consumption targets. Measurements [...] Read more.
Light-duty vehicle emission regulations worldwide set limits for the following gaseous pollutants: carbon monoxide (CO), nitric oxides (NOX), hydrocarbons (HCs), and/or non-methane hydrocarbons (NMHCs). Carbon dioxide (CO2) is indirectly limited by fleet CO2 or fuel consumption targets. Measurements are carried out at the dilution tunnel with “standard” laboratory-grade instruments following well-defined principles of operation: non-dispersive infrared (NDIR) analyzers for CO and CO2, flame ionization detectors (FIDs) for hydrocarbons, and chemiluminescence analyzers (CLAs) or non-dispersive ultraviolet detectors (NDUVs) for NOX. In the United States in 2012 and in China in 2020, with Stage 6, nitrous oxide (N2O) was also included. Brazil is phasing in NH3 in its regulation. Alternative instruments that can measure some or all these pollutants include Fourier transform infrared (FTIR)- and laser absorption spectroscopy (LAS)-based instruments. In the second category, quantum cascade laser (QCL) spectroscopy in the mid-infrared area or laser diode spectroscopy (LDS) in the near-infrared area, such as tunable diode laser absorption spectroscopy (TDLAS), are included. According to current regulations and technical specifications, NH3 is the only component that has to be measured at the tailpipe to avoid ammonia losses due to its hydrophilic properties and adsorption on the transfer lines. There are not many studies that have evaluated such instruments, in particular those for “non-regulated” worldwide pollutants. For this reason, we compared laboratory-grade “standard” analyzers with FTIR- and TDLAS-based instruments measuring NH3. One diesel and two gasoline vehicles at different ambient temperatures and with different test cycles produced emissions in a wide range. In general, the agreement among the instruments was very good (in most cases, within ±10%), confirming their suitability for the measurement of pollutants. Full article
(This article belongs to the Section Environmental Technology)
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14 pages, 3861 KiB  
Article
Ecology Health Evaluation System Based on Fish Movement Behavior Response
by Yuequn Huang, Rongcong Pang, Xiangtong Li, Wenjing Li, Zhanpeng Yang, Dunqiu Wang and Kun Dong
Water 2023, 15(23), 4066; https://doi.org/10.3390/w15234066 - 23 Nov 2023
Cited by 5 | Viewed by 1862
Abstract
Using fish as indicator organisms to monitor water quality can accurately reflect the pollution status of aquatic environments in real time. Currently, there are limited quantitative and empirical studies on fish movement behavior. An experimental study on the fish movement behavior response during [...] Read more.
Using fish as indicator organisms to monitor water quality can accurately reflect the pollution status of aquatic environments in real time. Currently, there are limited quantitative and empirical studies on fish movement behavior. An experimental study on the fish movement behavior response during water quality change was conducted using an aquatic environment model. Advanced acoustic tag monitoring technology was used to qualitatively and quantitatively assess fish movement. Using the temporal and spatial distributions of fish motion behavioral trajectories during water quality change, the fish behavior response indicators were the distance between the fish and the source of pollution, the distance between the fish and the water surface, and fish swimming speed. The fish were sensitive to water quality factors, including dissolved oxygen (DO) content, microcystin aeruginosa toxin (MC-LR), and non-ionic ammonia (NH3). The correlations between indicator pairs were analyzed. A new water ecological health evaluation system based on these indicators was constructed, and aquatic ecological health in the field was evaluated using the new system. The evaluation showed a sub-healthy state in spring and a slightly morbid to morbid state in summer, which was consistent with the results based on water quality indices. The accuracy of the proposed assessment system was verified. This showed that the assessment method and grade division of the assessment system were reasonable and feasible and could reflect the health status of the aquatic ecological environment in real time. This study provides a basis for the assessment of the health and restoration effects of the aquatic ecological environment. Full article
(This article belongs to the Special Issue Fish Ecology and Responses to Environmental Variation in Streams)
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20 pages, 6622 KiB  
Article
Determination of Phosphodiesterase Type-5 Inhibitors (PDE-5) in Dietary Supplements
by Oana Ramona Cătălina Gheorghiu, Anne Marie Ciobanu, Claudia Maria Guțu, Carmen Lidia Chițescu, Giorgiana Valentina Costea, Daniela Mădălina Anghel, Ana Maria Vlasceanu and Daniela Luiza Baconi
Molecules 2023, 28(10), 4116; https://doi.org/10.3390/molecules28104116 - 16 May 2023
Cited by 6 | Viewed by 3802
Abstract
This study proposed a high-performance thin-layer chromatography (HPTLC) screening method to detect phosphodiesterase 5 (PDE-5) inhibitors as possible adulterant agents in various dietary supplements. Chromatographic analysis was performed on silica gel 60F254 plates using a mixture of ethyl acetate:toluene:methanol:ammonia in a volume ratio [...] Read more.
This study proposed a high-performance thin-layer chromatography (HPTLC) screening method to detect phosphodiesterase 5 (PDE-5) inhibitors as possible adulterant agents in various dietary supplements. Chromatographic analysis was performed on silica gel 60F254 plates using a mixture of ethyl acetate:toluene:methanol:ammonia in a volume ratio of 50:30:20:0.5 as a mobile phase. The system provided compact spots and symmetrical peaks of sildenafil and tadalafil with retardation factor values of 0.55 and 0.90, respectively. The analysis of products purchased from the internet or specialized stores demonstrated the presence of sildenafil, tadalafil, or both compounds in 73.3% of products, highlighting inadequacies and inconsistencies in the labeling, as all dietary supplements were declared to be natural. The results were confirmed using ultra-high-performance liquid chromatography coupled with a positive electrospray ionization high-resolution tandem mass spectrometry (UHPLC-HRMS-MS) method. Furthermore, in some samples, vardenafil and various analogs of PDE-5 inhibitors were detected using a non-target HRMS-MS approach. The results of the quantitative analysis revealed similar findings between the two methods, with adulterant quantities found to be similar to or higher than those in approved medicinal products. This study demonstrated that the HPTLC method is a suitable and economical method for screening PDE-5 inhibitors as adulterants in dietary supplements intended for sexual activity enhancement. Full article
(This article belongs to the Special Issue Forensic Analysis in Chemistry)
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27 pages, 3262 KiB  
Article
Comprehensive Evaluation of Different TiO2-Based Phosphopeptide Enrichment and Fractionation Methods for Phosphoproteomics
by Jiaran Li, Jifeng Wang, Yumeng Yan, Na Li, Xiaoqing Qing, Ailikemu Tuerxun, Xiaojing Guo, Xiulan Chen and Fuquan Yang
Cells 2022, 11(13), 2047; https://doi.org/10.3390/cells11132047 - 28 Jun 2022
Cited by 13 | Viewed by 4418
Abstract
Protein phosphorylation is an essential post-translational modification that regulates multiple cellular processes. Due to their low stoichiometry and ionization efficiency, it is critical to efficiently enrich phosphopeptides for phosphoproteomics. Several phosphopeptide enrichment methods have been reported; however, few studies have comprehensively compared different [...] Read more.
Protein phosphorylation is an essential post-translational modification that regulates multiple cellular processes. Due to their low stoichiometry and ionization efficiency, it is critical to efficiently enrich phosphopeptides for phosphoproteomics. Several phosphopeptide enrichment methods have been reported; however, few studies have comprehensively compared different TiO2-based phosphopeptide enrichment methods using complex proteomic samples. Here, we compared four TiO2-based phosphopeptide enrichment methods that used four non-phosphopeptide excluders (glutamic acid, lactic acid, glycolic acid, and DHB). We found that these four TiO2-based phosphopeptide enrichment methods had different enrichment specificities and that phosphopeptides enriched by the four methods had different physicochemical characteristics. More importantly, we discovered that phosphopeptides had a higher deamidation ratio than peptides from cell lysate and that phosphopeptides enriched using the glutamic acid method had a higher deamidation ratio than the other three methods. We then compared two phosphopeptide fractionation methods: ammonia- or TEA-based high pH reversed-phase (HpH-RP). We found that fewer phosphopeptides, especially multi-phosphorylated peptides, were identified using the ammonia-based method than using the TEA-based method. Therefore, the TEA-based HpH-RP fractionation method performed better than the ammonia method. In conclusion, we comprehensively evaluated different TiO2-based phosphopeptide enrichment and fractionation methods, providing a basis for selecting the proper protocols for comprehensive phosphoproteomics. Full article
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11 pages, 2904 KiB  
Article
Removal of Ibuprofen at Low Concentration Using a Newly Formulated Emulsion Liquid Membrane
by Abdul Latif Ahmad, Mohd Hazarel Zairy Mohd Harun, Mohd Khairul Akmal Jasni and Nur Dina Zaulkiflee
Membranes 2021, 11(10), 740; https://doi.org/10.3390/membranes11100740 - 28 Sep 2021
Cited by 13 | Viewed by 2825
Abstract
Ibuprofen (IBP) is a pharmaceutical product that is widely prescribed as an over-the-counter painkiller. It has been classified as a contaminant of emerging concern (CEC) that has received global attention in the search for a better wastewater separation technology. The emulsion liquid membrane [...] Read more.
Ibuprofen (IBP) is a pharmaceutical product that is widely prescribed as an over-the-counter painkiller. It has been classified as a contaminant of emerging concern (CEC) that has received global attention in the search for a better wastewater separation technology. The emulsion liquid membrane (ELM) is one of the potential solutions for IBP removal from wastewater owing to its advantages, such as the ability to remove a highly soluble solute, energy efficient and tuneable formulation. To develop this ELM, a series of parameters such as stirring speed, emulsification time, organic to internal phase volume ratio (O/I), internal phase concentration, carrier concentration and surfactant concentration were studied. The extraction was carried out for 15 min stirring time and the concentration of IBP in the feed phase was determined using a UV-Vis spectrophotometer. The optimum formulation for the ELM was found at 300 rpm stirring speed, 20 min emulsification time, 3:1 of O/I, 0.1 M ammonia, NH3 (stripping agent), 6 wt% trioctylamine, TOA (carrier) and 2 wt% sorbitan monooleate, Span 80 (non-ionic surfactant). IBP removal of 89% was achieved at the optimum parameters of ELM. The current research demonstrated that a newly formulated ELM has great potential in removing a low concentration IBP from wastewater. Full article
(This article belongs to the Special Issue Novel Membranes for Environmental Application)
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14 pages, 13172 KiB  
Article
Entrapment of Phenylalanine Ammonia-Lyase in Nanofibrous Polylactic Acid Matrices by Emulsion Electrospinning
by Gábor Koplányi, Evelin Sánta-Bell, Zsófia Molnár, Gergő Dániel Tóth, Muriel Józó, András Szilágyi, Ferenc Ender, Béla Pukánszky, Beáta G. Vértessy, László Poppe and Diána Balogh-Weiser
Catalysts 2021, 11(10), 1149; https://doi.org/10.3390/catal11101149 - 25 Sep 2021
Cited by 7 | Viewed by 2903
Abstract
Immobilization of the recombinant, plant-derived Petroselinum crispum phenylalanine ammonia lyase (PcPAL) in electrospun matrices have the potential to create promising, easy-to-use biocatalysts. Polylactic acid (PLA) a biologically inert, commercial biopolymer, was chosen as the material of the carrier system. PLA could [...] Read more.
Immobilization of the recombinant, plant-derived Petroselinum crispum phenylalanine ammonia lyase (PcPAL) in electrospun matrices have the potential to create promising, easy-to-use biocatalysts. Polylactic acid (PLA) a biologically inert, commercial biopolymer, was chosen as the material of the carrier system. PLA could be electrospun properly only from water-immiscible organic solvents, which limits its application as a carrier of sensitive biological objects. The emulsion electrospinning is a proper solution to overcome this issue using non-ionic emulsifiers with different hydrophilic-lipophilic balance (HLB) values. The stabilized emulsion could protect the sensitive PcPAL dissolved in the aqueous buffer phase and improve fiber formation, plus help to keep the biocatalytic activity of enzymes. In this study, the first approach is described to produce PLA nanofibers containing PcPAL enzymes by emulsion electrospinning and to use the resulted biocatalyst in the ammonia elimination reaction from l-phenylalanine. Full article
(This article belongs to the Special Issue Advanced Technologies for Biocatalytic Synthesis)
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20 pages, 3141 KiB  
Article
Investigation of Dendriplexes by Ion Mobility-Mass Spectrometry
by Emma-Dune Leriche, Marie Hubert-Roux, Carlos Afonso, Catherine M. Lange, Martin C. Grossel, Florian Maire and Corinne Loutelier-Bourhis
Molecules 2014, 19(12), 20731-20750; https://doi.org/10.3390/molecules191220731 - 12 Dec 2014
Cited by 2 | Viewed by 7248
Abstract
Highly branched polyamidoamine (PAMAM) dendrimers presenting biological activities have been envisaged as non-viral gene delivery vectors. They are known to associate with nucleic acid (DNA) in non-covalent complexes via electrostatic interactions. Although their transfection efficiency has been proved, PAMAMs present a significant cytotoxicity [...] Read more.
Highly branched polyamidoamine (PAMAM) dendrimers presenting biological activities have been envisaged as non-viral gene delivery vectors. They are known to associate with nucleic acid (DNA) in non-covalent complexes via electrostatic interactions. Although their transfection efficiency has been proved, PAMAMs present a significant cytotoxicity due to their cationic surface. To overcome such a drawback, different chemical modifications of the PAMAM surface have been reported such as the attachment of hydrophobic residues. In the present work, we studied the complexation of DNA duplexes with different low-generation PAMAM; ammonia-cored G0(N) and G1(N) PAMAM, native or chemically modified with aromatic residues, i.e., phenyl-modified-PAMAM G0(N) and phenylalanine-modified-PAMAM G1(N). To investigate the interactions involved in the PAMAM/DNA complexes, also called dendriplexes, we used electrospray ionization (ESI) coupled to ion mobility spectrometry-mass-spectrometry (IM-MS). ESI is known to allow the study of non-covalent complexes in native conditions while IM-MS is a bidimensional separation technique particularly useful for the characterization of complex mixtures. IM-MS allows the separation of the expected complexes, possible additional non-specific complexes and the free ligands. Tandem mass spectrometry (MS/MS) was also used for the structural characterization. This work highlights the contribution of IM-MS and MS/MS for the study of small dendriplexes. The stoichiometries of the complexes and the equilibrium dissociation constants were determined. The [DNA/native PAMAM] and [DNA/modified-PAMAM] dendriplexes were compared. Full article
(This article belongs to the Special Issue Dendrimers in Medicine and Biotechnology)
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