Search Results (16)

This study documents the recolonization of the wolf using opportunistic and systematic data, including camera trapping and scat surveys in south-eastern Italy. Wolf distribution was mapped using a 10 × 10 km grid, and Generalized Linear Models (GLMs) were applied to identify environmental and anthropogenic drivers of stable presence. Camera trapping and scat analyses were used to provide the first insights into the activity patterns and feeding habits of the species. The results showed a significant expansion in wolf range, with occurrence increasing by 120%, especially in areas with high forest cover. During 1402 camera-trap nights, wolves and wild prey species displayed primarily nocturnal activity, reducing overlap with human presence, though prey activity peaks were offset from those of wolves. Diet analysis of 75 scats revealed a high occurrence of livestock and pets, along with all wild species living in the area (i.e., ungulates, medium-sized and micromammals). These findings underscore the wolf’s ecological adaptability and ability to thrive in heavily altered landscapes. Indeed, this study shows how wolves were able to occupy even suboptimal areas, taking advantage of both anthropogenic and wild trophic resources, still displaying nocturnal activity to lower the probability of encounters with humans. Full article

Leptospirosis is a bacterial zoonosis caused by pathogenic species from the genus Leptospira. Infection mostly occurs through indirect contact with environmental water contaminated with the urine of reservoir animals. Information on the circulation of leptospirosis in West Africa, as well as its potential reservoir hosts, is limited. Therefore, we carried out trapping surveys in the Guinean forest in November 2022, and samples were collected from 42 micromammals. The animals were both morphologically and genetically identified. The lungs and kidneys were screened for Leptospira using Lfb1-gene-targeting real-time PCR, and positive samples were genotyped based on the polymorphic Lfb1 gene. Leptospira species were detected in the kidneys of three micromammals: Mastomys natalensis, Lophuromys sikapusi, and Rattus rattus. Leptospira borgpetersenii was identified in Rattus rattus and Mastomys natalensis that were captured in two different villages. The phylogenetic analysis indicated that this subspecies had previously been detected in one patient in Mayotte, but the reservoir was not identified. A new subspecies of Leptospira kirschneri was isolated in Lophuromys sikapusi from the same village as the Mastomys natalensis positive for L. borgpetersenii. The high diversity of both the reservoirs and Leptospira species in the Guinean forest indicates that we should study other natural regions and reinforce communities’ awareness of Leptospira infection risks in Guinea. Full article

Recent investigations in the upper Lower–Middle Pleistocene deposits of the Megalopolis Basin (Greece) led to the discovery of several sites/findspots with abundant faunal material. Here, we provide an updated overview including new results on the micro- and macro-mammal fauna. Important new discoveries comprise partial hippopotamus skeletons from Marathousa 1 and the new Lower Pleistocene site Choremi 6, as well as a second partial elephant skeleton from Marathousa 1, including a complete tusk and the rarely found stylohyoideum. Based on the first results from the newly collected micromammals, we discuss age constraints of the sites, and we provide biostratigraphic/biochronologic remarks on key mammal taxa for the Middle Pleistocene of Greece and southeastern Europe. The presence of mammals highly dependent on freshwater for their survival, together with temperate-adapted ones in several stratigraphic layers of the basin, including those correlated with glacial stages, when conditions were colder and/or drier, indicate the capacity of the basin to retain perennial freshwater bodies under milder climatic conditions, even during the harsher glacial periods of the European Middle Pleistocene, and further support its refugial status. Yet, the smaller dimensions of the Megalopolis hippopotamuses may represent a response to the changing environmental conditions of the epoch, not optimal for hippopotamuses. Overall, the Megalopolis Basin comprises a unique fossil record for southeastern Europe and provides valuable insights into the Middle Pleistocene terrestrial ecosystems of Europe, and hominin adaptations in particular. Full article

Insectivores (Eulypotiphla) are a substantial component of Russian forest ecosystems. The parasites of these animals also form an important part of natural biocenoses and act as one of the factors in the formation of biodiversity. The Mordovia Nature Reserve and National Park “Smolny” are large, forested areas located in the center of European Russia. We studied the helminth fauna of insectivores in these protected areas in 2018–2022. In total, using the method of complete helminthological necropsy, we examined 478 individuals of shrews, moles, and hedgehogs and recorded 34 species of parasitic worms, i.e., 8 trematode, 7 cestode, 1 acanthocephalan, and 18 nematode species. The most diverse helminth fauna was found in Sorex araneus (22 species). The composition of helminths in S. isodon (12), Neomys fodiens (9), Sorex minutus, and Erinaceus roumanicus (8 species each) turned out to be less diverse. The lowest species diversity of helminths was observed in Neomys milleri (3) and Talpae europaea (2 species). Taking into account the newly obtained data, we conducted a review of the helminth diversity in shrews, hedgehogs, and moles in the Middle Volga region. According to our literature data, the helminth fauna of insectivores in this region consists of 52 species, including 14 cestodes, 13 trematodes, 22 nematodes, and 3 acanthocephalans. Most of them belong to the Palearctic faunal complex (36 species). The helminth fauna of insectivores in the studied protected areas was compared with the helminth fauna of micromammals in other areas of the Middle Volga region. Our comparative analysis showed a high and average degree of similarity in the helminth fauna within individual species and genera of Eulipotyphla. Full article

In this study, we present our dataset containing up-to-date information about occurrences of trematodes in small mammals in the Middle Volga region (European Russia). The dataset summarizes micromammals’ trematode occurrences obtained by long-term field helminthological studies of soricomorphs, erinaceomorphs, bats and rodents during a period of more than 20 years (1999–2022). Our studies of trematodes in micromammals were conducted using the method of complete helminthological necropsy. The dataset includes 7470 records of trematode occurrences in micromammals with 4483 digenean records in Samara Oblast, 2986 records in Republic of Mordovia and one trematode record in Ulyanovsk Oblast. Our dataset presents the data on 43 trematode species from 21 genera and 9 families found in the region studied. The data on trematodes from 28 species of micromammals belonging to 14 genera are presented. In total, the number of collected trematode specimens in our dataset is 153,050. Each occurrence record contains the trematode species name, basis of record, locality of finding, host species, site in host, date and authors of the record and species identification. All occurrence records are georeferenced. The dataset is based on the research of the staff of the Institute of Ecology of the Volga River basin of RAS and the Joint Directorate of the Mordovia Nature Reserve and National Park “Smolny”. The distribution and diversity of trematodes of small mammals in the Middle Volga region has not been completely studied, and further investigation may reveal both new occurrences of trematodes and new host records. Full article

This multiproxy work presents the archeozoological analysis of fish and microvertebrate remains from the Middle Bronze Age tell site of Borsodivánka (Borsod Plain, North-eastern Hungary). The fish faunal assemblage provides valuable data on the choice of exploited consumption patterns, taphonomy, and aquatic paleoenvironmental conditions at the site during the Bronze Age. Only freshwater taxa are present in the assemblage, for example, northern pike (Esox lucius); cyprinids: roach (Rutilus rutilus), common carp (Cyprinus carpio), common chub (Squalius cephalus) and common nase (Chondrostoma nasus); and percids: European perch (Perca fluviatilis) and pikeperch (Sander lucioperca). Herpetofaunal and micromammal remains are also part of this study, improving our knowledge of the site’s freshwater ecosystem. The grass snake (Natrix cf. natrix) and the European pond terrapin (Emys orbicularis), typical of aquatic ecosystems, are associated with the Aesculapian ratsnake (Zamenis longissimus), more typical of forest, shrubland, and grassland. The presence of amphibians such as toads (Bufo/Bufotes sp.) and frogs (Rana sp.) complete the herpetofaunal list. The microvertebrates also support a mature fluvial system, as represented by taxa like the European water vole (Arvicola amphibius). Other micromammals are present, such as the wood mouse (Apodemus sylvaticus), the group of the common/field vole (Microtus arvalis/agrestis), the European mole (Talpa europaea), and the house mouse (Mus musculus). All of them are common in forests, shrubland, and grassland. However, the commensal house mouse is more commonly associated with anthropogenic areas. In conclusion, Borsodivánka is characterized by a diverse landscape mosaic, displayed by the co-existence of a well-developed forest and a freshwater inland ecosystem with agricultural land in the wider area. Finally, the Tisza River and its flood plain represented the main water source close to the site, distinguished by the dominance of fish species from deep and slow-flowing waters. Full article

Although antibiotic resistance is a major issue for both human and animal health, very few studies have investigated the role of the bacterial host spectrum in its dissemination within natural ecosystems. Here, we assessed the prevalence of methicillin resistance among Staphylococcus aureus (MRSA) isolates from humans, non-human primates (NHPs), micromammals and bats in a primatology center located in southeast Gabon, and evaluated the plausibility of four main predictions regarding the acquisition of antibiotic resistance in this ecosystem. MRSA strain prevalence was much higher in exposed species (i.e., humans and NHPs which receive antibiotic treatment) than in unexposed species (micromammals and bats), and in NHP species living in enclosures than those in captivity—supporting the assumption that antibiotic pressure is a risk factor in the acquisition of MRSA that is reinforced by the irregularity of drug treatment. In the two unexposed groups of species, resistance prevalence was high in the generalist strains that infect humans or NHPs, supporting the hypothesis that MRSA strains diffuse to wild species through interspecific transmission of a generalist strain. Strikingly, the generalist strains that were not found in humans showed a higher proportion of MRSA strains than specialist strains, suggesting that generalist strains present a greater potential for the acquisition of antibiotic resistance than specialist strains. The host spectrum is thus a major component of the issue of antibiotic resistance in ecosystems where humans apply strong antibiotic pressure. Full article

Island ecosystems differ in several elements from mainland ecosystems and may induce variations related to natural selection and patterns of adaptation in most aspects of the biology of an organism. Thylamys elegans (Waterhouse, 1839) is a marsupial endemic to Chile, distributed from Loa River to Concepción. Historically, three subspecies have been described: Thylamys elegans elegans, Thylamys elegans coquimbensis and Thylamys elegans soricinus. For this research, two morphometric approaches and a biomechanical model were used to compare the mandible shapes and biomechanics between two Chilean mouse opossum populations belonging to different subspecies: one from the coastal desert of Chile (T. e. coquimbensis) and the other from the central inland region (T. e. elegans). Additionally, mandibles of insular populations found in the Reserva Nacional Pinguino de Humboldt (RNPH)), from which the subspecies association is unknown, were also included. The results showed that insular populations have differences in mandibular shapes, sizes and biomechanical characteristics compared to continental populations, which may be related to environmental variables like aridity and vegetation cover, prey type, insularity effects and/or the founder effect on micromammals, apart from vicariance hypotheses and other selective pressures. Full article

Thanks to recent developments in molecular methods, many new species have been discovered within the genus Circovirus, which comprises viruses of veterinary relevance found in a broad range of hosts. In particular, several circoviruses are known to infect birds, often causing immunosuppression and feathering disorders. Nonetheless, nothing is known about their circulation in birds of prey. In this study, samples from 61 birds of prey representing ten different species, recovered by a wildlife rescue centre in Southern Italy, were taken at necropsy and analysed by PCR with pan-Circovirus primers. Only one sample, collected from a tawny owl (Strix aluco), tested positive. Its genome, sequenced by primer walking, displays the typical features of circoviruses. Based on demarcation criteria, the detected strain qualifies as a novel species, which was named “tawny owl-associated circovirus” (ToCV). Phylogenetically, ToCV clustered with mammalian rather than avian circoviruses, and its closeness to a rodent circovirus suggests that its host may have been a micromammal eaten by the tawny owl. On the other hand, its detection in the spleen fits with the tropism of other avian circoviruses. Little can be therefore said on its biology and pathogenicity, and further efforts are needed to better characterize its epidemiology. Full article

The National Park “Smolny” is a large forest area, located in the center of European Russia. The helminth fauna of myomorph rodents was studied for the first time within the National Park in 2018–2020. Rodents were examined by the method of complete helminthological dissection. A total of 30 species of parasites were recorded in 11 rodent species: 6 trematodes, 11 cestodes and 13 nematodes. The trematode Plagiorchis maculosus (Rudolphi, 1802) was found in Clethrionomys glareolus (Schreber, 1780) from the Russian fauna for the first time. Clethrionomys glareolus and Microtus arvalis (Pallas, 1779) are new hosts for P. maculosus and metacestode Versteria mustelae (Gmelin, 1790), respectively. The most widespread and eurybiont rodent species have the most diverse and rich helminth fauna, such as C/ glareolus (14 species), Apodemus agrarius (Pallas, 1771) (12) and Sylvaemus uralensis (Pallas, 1811) (10). The helminth fauna is less diverse in Sylvaemus flavicollis (Melchior, 1834), M. arvalis (7 species each), Microtus agrestis (Linnaeus, 1761) (5), Microtus subterraneus (de Selys-Longchamps, 1836) (3), Sicista betulina (Pallas, 1779) (2) and Arvicola amphibius (Linnaeus, 1758) (1). Comparative analysis the helminth fauna of small rodents from the National Park “Smolny” with micromammals from other regions of European Russia revealed that the high similarity with other areas reaches the helminth fauna of M. subterraneus, S. flavicollis, S. uralensis, S. betulina, A. amphibius and M. agrestis. Full article

As micromammals are highly sensitive to changes in their habitat, variations in species representation are often used to reconstruct local environmental conditions. However, taphonomic aspects of micromammals are often overlooked, despite the fact that they can provide important information for our understanding of archaeological sites. La Roche-à-Pierrot, Saint-Césaire, is a major archaeological site for our understanding of the Middle-to-Upper Palaeolithic transition in Western Europe. Clearly documenting site formation processes, the post-depositional reworking of deposits and the sequence of human occupations is fundamental for providing a secure archaeostratigraphic context of the site. The exceptionally large accumulation of micromammals from recently excavated stratigraphic units at the site makes it possible to track variations in the density of micromammals across the stratigraphic sequence. The taphonomic analysis of micromammals demonstrates these variations are not related to a change in the main accumulation agent or post-depositional phenomena. A negative correlation between small mammal remains and archaeological material suggests that peaks in micromammal densities can potentially be correlated with periods when the site was abandoned or when human occupation was less intense, and therefore provide new data for interpreting the Saint-Césaire stratigraphic sequence. Full article

Coxiella burnetii, the causal agent of human Q fever and animal Coxiellosis, is a zoonotic infectious bacterium with a complex ecology that results from its ability to replicate in multiple (in)vertebrate host species. Spain notifies the highest number of Q fever cases to the ECDC annually and wildlife plays a relevant role in C. burnetii ecology in the country. However, the whole picture of C. burnetii hosts is incomplete, so this study seeks to better understand the role of micromammals in C. burnetii ecology in the country. Spleen samples from 816 micromammals of 10 species and 130 vaginal swabs from Microtus arvalis were analysed by qPCR to detect C. burnetii infection and shedding, respectively. The 9.7% of the spleen samples were qPCR positive. The highest infection prevalence (10.8%) was found in Microtus arvalis, in which C. burnetii DNA was also detected in 1 of the 130 vaginal swabs (0.8%) analysed. Positive samples were also found in Apodemus sylvaticus (8.7%), Crocidura russula (7.7%) and Rattus rattus (6.4%). Positive samples were genotyped by coupling PCR with reverse line blotting and a genotype II+ strain was identified for the first time in one of the positive samples from M. arvalis, whereas only partial results could be obtained for the rest of the samples. Acute Q fever was diagnosed in one of the researchers that participated in the study, and it was presumably linked to M. arvalis handling. The results of the study are consistent with previous findings suggesting that micromammals can be infected by C. burnetii. Our findings additionally suggest that micromammals may be potential sources to trace back the origin of human Q fever and animal Coxiellosis cases in Europe. Full article

Antimicrobial resistance (AMR) is an increasing threat to human health and an important issue also in the natural environment. For this study, an ecopathological approach was applied to the monitoring of the antimicrobial resistance in the province of Parma, Northern Italy. Fourteen monitoring sites and seventy-four faecal samples from four species of wild micromammals (Apodemus sylvaticus, Microtus savii, Mus domesticus and Suncus etruscus) were collected. Samples were subjected to bacteriological examination and antimicrobial susceptibility testing. Antibiotics belonging to 13 different antibiotic classes were tested. Collected data showed a prevalence of multi-drug resistant (MDR) strains of 55.13% and significant differences in the prevalence of MDR strains among the different micromammal species, while sex, age and anthropization level did not significantly affected MDR strains prevalence. Moreover, a high prevalence of bacterial strains resistant to colistin (95%), gentamicin (87%) and amikacin (83%) was observed. To our knowledge, this is the first report on antibiotic resistance in wild micromammals in the province of Parma. Full article

Based on compiled small mammal trapping data collected over 12 years from Benin and Niger (3701 individual records from 66 sampling sites), located in mainland Africa, we here describe the small mammal community assemblage in urban habitats along the commercial axis connecting the two countries, from the seaport of Cotonou to the Sahelian hinterland, with a particular focus on invasive species. In doing so, we document extant species distributions, which highlight the risks of continuing the range expansion of three synanthropic invasive rodent species, namely black rats (Rattus rattus), brown rats (R. norvegicus), and house mice (Mus musculus). Using various diversity estimates and community ecology approaches, we detect a latitudinal gradient of species richness that significantly decreased Northward. We show that shrews (Crocidura) represent a very important component of micro-mammal fauna in West African towns and villages, especially at lower latitudes. We also demonstrate that invasive and native synanthropic rodents do not distribute randomly in West Africa, which suggests that invasive species dynamics and history differ markedly, and that they involve gradual, as well as human-mediated, long distance dispersal. Patterns of segregation are also observed between native Mastomys natalensis and invasive rats R. rattus and R. norvegicus, suggesting potential native-to-invasive species turn over. Consequences of such processes, especially in terms of public health, are discussed. Full article

Coulet des Roches is a natural karst trap in Southern France. Its infilling dates back to the end of the Pleniglacial (Last Glacial Maximum, LGM) and the end of the Tardiglacial (Last Glacial, LG). Three mustelid species have been identified in this infilling: the common polecat (Mustela putorius, minimum number of individuals (MNI) = 4), the stoat (Mustela erminea, MNI = 14) and the weasel (Mustela nivalis, MNI = 48). The common polecat remains are metrically and morphologically indistinguishable from recent European specimens. The smallest mustelids are mainly represented by average-sized specimens, which are slightly smaller than extant species. A partial weasel skeleton of an extremely small pygmy weasel, regarded as a typical glacial element, was also discovered. Sexual dimorphism is strongly pronounced. Seventeen horses have been identified, corresponding to the chrono subspecies Equus ferus gallicus. The analysis of the muzzles and metapodials shows overall adaptation to cool and dry weather conditions. The ibexes are typical of Capra ibex (MNI = 15). The p3 morphology is similar to the LGM populations located on the southern side of the Durance River, with an important dilation of the metaconid, except for the oldest LGM specimen. This dilation is older on the southern side of the Durance River, as it occurs at the end of MIS 3. This difference could reflect the barrier role of the Durance River. Micromammals are abundant (mostly related to rodents and shrews; 18 genera/species; MNI = 470). The paleoecological study highlighted important and rapid climatic and environmental fluctuations throughout the sequence. As a result of climatic fluctuations, the plains constituted a corridor for the migration of temperate species to Provence during cold periods (“southern refuge zone”) and their re-immigration to Western Europe during temperate episodes. In a related and complementary way, the highland areas not only played a natural role as a geographical barrier, but also constituted a refuge zone during interglacial episodes for some micromammal species originating from northern and eastern parts of Europe (“cryptic southern refugia”). Full article