Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Article Types

Countries / Regions

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Search Results (272)

Search Parameters:
Keywords = histochemical analysis

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
15 pages, 21103 KB  
Article
Pharmacognostic Characterization of Abutilon theophrasti Medic. Growing in Kazakhstan
by Akdidar Yegizbayeva, Nurgali Rakhymbayev, Kairat Zhakipbekov, Galiya Ibadullayeva, Elmira Serikbayeva, Arailym Yegizbayeva, Arailym Mukanova, Nazgul Makasheva, Nurdaulet Zhumabayev and Bassymbek Dilbarkhanov
Plants 2026, 15(14), 2110; https://doi.org/10.3390/plants15142110 - 8 Jul 2026
Viewed by 291
Abstract
Abutilon theophrasti Medic. is a widely distributed species belonging to the Malvaceae family. It represents a potential source of bioactive compounds with antioxidant, anti-inflammatory, and antimicrobial properties. Despite the species’ pharmacological significance and its widespread distribution, information on the diagnostic pharmacognostic characteristics of [...] Read more.
Abutilon theophrasti Medic. is a widely distributed species belonging to the Malvaceae family. It represents a potential source of bioactive compounds with antioxidant, anti-inflammatory, and antimicrobial properties. Despite the species’ pharmacological significance and its widespread distribution, information on the diagnostic pharmacognostic characteristics of A. theophrasti Medic. remains limited, and no such studies have previously been conducted on raw materials growing in Kazakhstan. The objective of this study was to ascertain the diagnostically significant morphological, anatomical, and histochemical characteristics of A. theophrasti Medic. in order to facilitate the identification and pharmacognostic standardization of medicinal plant raw materials. The subjects of the study were the plant’s aerial and underground organs, including leaves, stems, petioles, inflorescences, flowers, fruits, and roots. A comprehensive analysis of the raw material was conducted using a variety of analytical methods, including macroscopic, microscopic, and histochemical approaches. The study’s findings enabled the identification of characteristic features of the plant’s aerial and underground organs through macroscopic analysis. Microscopic examination revealed diagnostically significant characteristics of the species A. theophrasti Medic., including an anomocytic stomatal apparatus, numerous simple and stellate trichomes, calcium oxalate druses, and characteristic anatomical features of the leaf, stem, sepals, and root. Taken together, these characteristics form a diagnostic complex that can be used to identify this species. Histochemical analysis revealed the localization of phenolic compounds, flavonoids, and trace amounts of essential oil in the tissues of the leaf petiole and root. However, alkaloids, starch, and sesquiterpene lactones were not detected. The identified morphological, anatomical, and histochemical data serve to supplement the information on the diagnostically significant characteristics of the species, carrying practical importance for the quality assessment of plant raw materials. Full article
Show Figures

Figure 1

14 pages, 6356 KB  
Article
Morphological, Histo-Morphometric and Histochemical Studies on Compartment 2 of Dromedary Camel (Camelus dromedarius) Stomach
by Zarroug Hassan Ibrahim
Vet. Sci. 2026, 13(7), 630; https://doi.org/10.3390/vetsci13070630 - 29 Jun 2026
Viewed by 279
Abstract
The second stomach compartment (C2) of the dromedary camel (Camelus dromedarius) plays an important role in digestion. However, detailed morphological and histochemical data remain limited. This study aimed to investigate the gross anatomy, histological organization, histometric features, and histochemical distribution of [...] Read more.
The second stomach compartment (C2) of the dromedary camel (Camelus dromedarius) plays an important role in digestion. However, detailed morphological and histochemical data remain limited. This study aimed to investigate the gross anatomy, histological organization, histometric features, and histochemical distribution of muco-substances in C2. The study was conducted on twenty dromedary camels, including fetuses and adults. Gross anatomical observations were performed on eight fresh and fixed specimens, while histological, histometric, and histochemical analyses were carried out on samples from twelve adult camels using routine and special staining techniques to identify neutral and acidic mucins. C2 was the smallest gastric compartment, located on the right side of the abdominal cavity and partially continuous with C1. Its mucosa formed chambered zones supported by prominent longitudinal muscular bands. Histologically, C2 comprised glandular and non-glandular regions. The glandular mucosa contained gastric pits and branched tubular glands with mucous, chief, and parietal cells, whereas the non-glandular region was lined by keratinized stratified squamous epithelium. Submucosal lymphoid aggregations were observed near the C2–C3 junction. Histometric analysis revealed a markedly developed tunica muscularis. Strong PAS and Alcian blue reactions indicated abundant neutral and acidic mucins. These findings demonstrate that C2 is a structurally specialized compartment supporting digestion, mucosal immune defense, and adaptation to arid environments, clearly distinguishing it from the reticulum of true ruminants. Full article
(This article belongs to the Special Issue Advances in Morphology and Histopathology in Veterinary Medicine)
Show Figures

Graphical abstract

21 pages, 8195 KB  
Article
The Digestive System of the Greater Weever (Trachinus draco L.) as a Potential Alternative Source of Collagen: A Preliminary Study
by Nives Kević, Ena Ivić, Jelena Škarica Žikov, Anita Racetin, Marina Rudan Dimlić, Nela Kelam, Ivana Bočina and Ivana Restović
Int. J. Mol. Sci. 2026, 27(12), 5557; https://doi.org/10.3390/ijms27125557 - 19 Jun 2026
Viewed by 490
Abstract
This preliminary study characterises type I collagen in the digestive system of the greater weever (Trachinus draco L.) by integrating histochemical and biochemical techniques. To the best of our knowledge, this study represents the first baseline mapping of type I collagen within [...] Read more.
This preliminary study characterises type I collagen in the digestive system of the greater weever (Trachinus draco L.) by integrating histochemical and biochemical techniques. To the best of our knowledge, this study represents the first baseline mapping of type I collagen within the gastrointestinal tract of this species. Mallory staining and indirect immunofluorescence confirmed collagen presence across the oesophagus, stomach, and intestine. The histochemical quantification of the fluorescent area (100 measurements per organ across 15 fish specimens) showed no significant differences (p = 0.1315), indicating a uniform spatial distribution. However, biochemical analysis via hydroxyproline assay and a two-way ANOVA revealed significant differences in collagen content among organs (p = 0.0308). The stomach yielded the highest concentration (4.199 µg/mg), significantly exceeding that of the intestine (1.713 µg/mg; Šídák’s post hoc, p = 0.0300). This discrepancy suggests that the higher gastric content is due to greater fibre density rather than distribution area. SDS-PAGE and Western blot confirmed protein molecular weights of 100–130 kDa, corresponding to α1 and α2 chains typical of type I collagen. The combination of these histochemical and biochemical methods effectively detects and characterises collagen in fish gastrointestinal by-products. By introducing T. draco as a novel subject in this context, these findings provide essential baseline anatomical and histological data and offer a clear scientific justification for the biotechnological valorisation of unutilised commercial fishing by-products, fully aligning with sustainable marine circular economy principles. Full article
(This article belongs to the Section Molecular Biology)
Show Figures

Figure 1

12 pages, 1611 KB  
Article
Virtual Evaluation of Hematoxylin & Eosin via Digital Pathology Survey (VEED) Project: Results from a Non-Inferiority Study of a Tabs-Based Staining Method
by Lorenzo Nibid, Erica Iannaccone, Elisabetta Maffei, Veronica Vicomandi, Martina D’Angelo, Cristiana Bellan, Bruna Cerbelli, Giorgio Cazzaniga, Vincenzo L’imperio, Albino Eccher, Giuseppe Nicolò Fanelli, Alessandro Gambella, Luca Mastracci, Giuseppe Ingravallo, Stefano Marletta, Francesco Merolla, Pasquale Pisapia, Luisella Righi, Silvia Uccella, Mariavittoria Vescovo, Roberto Virgili, Alessandro Caputo and Giuseppe Perroneadd Show full author list remove Hide full author list
Diagnostics 2026, 16(12), 1868; https://doi.org/10.3390/diagnostics16121868 - 16 Jun 2026
Viewed by 478
Abstract
Background/Objectives: Despite hematoxylin and eosin (H&E) staining remaining the cornerstone of histopathological diagnosis, substantial intra- and inter-laboratory variability persists. This issue is increasingly relevant in Digital Pathology, where staining inconsistency may affect whole-slide image interpretation and the performance of image analysis algorithms. In [...] Read more.
Background/Objectives: Despite hematoxylin and eosin (H&E) staining remaining the cornerstone of histopathological diagnosis, substantial intra- and inter-laboratory variability persists. This issue is increasingly relevant in Digital Pathology, where staining inconsistency may affect whole-slide image interpretation and the performance of image analysis algorithms. In the present work, we evaluated the diagnostic adequacy and non-inferiority of a novel tabs-based H&E histochemical staining method compared with conventional liquid reagents. Methods: Fifty formalin-fixed paraffin-embedded tissue samples from routine practice were sectioned in duplicate and stained either conventionally or using H&E Stain Tabs. After slide review, 14 representative tissue samples were selected, scanned at 40× magnification, and used to generate 24 matched image pairs at different magnifications. A blind online survey was completed by 13 expert pathologists using high-quality monitors. Participants assessed overall staining preference and rated stromal, epithelial, cytoplasmic, and nuclear staining quality. Non-inferiority was tested using a predefined margin of −0.10, and paired rating differences were analyzed using the Wilcoxon signed-rank test. Results: Across 312 paired evaluations, the tabs-based method was preferred in 120 cases (38.5%), conventional staining in 118 cases (37.8%), and no preference was expressed in 74 cases (23.7%). The tabs-based method met the criterion for non-inferiority compared with standard staining (z = 2.7). Rating-scale analysis showed significantly better stromal evaluation with the tablet-based method (z = 2.638; p = 0.008), whereas no significant differences were observed for epithelial, cytoplasmic, or nuclear staining. All evaluated images were considered diagnostically adequate. Conclusions: The tabs-based H&E stain was non-inferior to the conventional method and showed particularly favorable performance in the assessment of stromal components. These findings support its potential role in improving staining reproducibility and standardization, particularly in Digital Pathology workflows where pre-analytical and analytical consistency is critical. Full article
(This article belongs to the Section Pathology and Molecular Diagnostics)
Show Figures

Graphical abstract

21 pages, 18333 KB  
Article
Histological Study of Peanut Hull: Initial Barrier Against Fungal Invasion?
by Birat Sapkota and Nirmal Joshee
Plants 2026, 15(12), 1849; https://doi.org/10.3390/plants15121849 - 15 Jun 2026
Viewed by 393
Abstract
Research on the cataloging of microstructures and chemical compound localization in peanut hulls in relation to fungal tolerance remains limited. The hull (pericarp) is the first physical interface with the soil environment and may contribute to defense against fungal invasion. Here, hull microstructure [...] Read more.
Research on the cataloging of microstructures and chemical compound localization in peanut hulls in relation to fungal tolerance remains limited. The hull (pericarp) is the first physical interface with the soil environment and may contribute to defense against fungal invasion. Here, hull microstructure and histochemical localization of alkaloid-like compounds, cellulose, lignin, starch, and total proteins were characterized across reproductive developmental stages R3–R6 in three commercially grown cultivars (Georgia-06G, Georgia-12Y, and Georgia-18RU). Stained sections were examined by light and fluorescence microscopy, and images were quantified in Fiji-ImageJ as stained area percentage. Among the compounds studied, the highest area percentages were observed at later stages (R5 and R6). Alkaloid-like compounds, cellulose, and starch were higher at the R5 stages of G-18 (9.61 ± 0.75), G-12Y (22.96 ± 5.84), and G-06 (6.31 ± 1.13) respectively, while lignin and total proteins were highest at the R6 stage of G-18 (respectively, 14.49 ± 1.43 and 13.90 ± 1.45). The lowest histochemical presence for most metabolites occurred in the early stages (R3–R4). This indicates that hull maturation is accompanied by increased physical (sclerenchyma and lignified cells) and biochemical (alkaloid-like compounds, proteins) features consistent with protective roles. As the analysis was based on representative sections and regions of interest (ROI)-level quantification, the results are intended to guide future studies on hull-mediated defense and breeding for Aspergillus tolerance. Full article
(This article belongs to the Section Plant Development and Morphogenesis)
Show Figures

Figure 1

14 pages, 7744 KB  
Article
Preliminary Evaluation of Muscle Fiber Composition in the Middle Gluteal Muscle in Race Mules and Mammoth Donkeys
by Raja Zabeeh Ullah Khan, Neil Gray, Francisco Javier Navas González and Amy K. McLean
Animals 2026, 16(11), 1640; https://doi.org/10.3390/ani16111640 - 27 May 2026
Viewed by 429
Abstract
Research on mule and donkey muscle composition remains limited despite their global importance as working equids. The objective of this study is to identify Mammoth donkey jacks with higher percentage of fast twitch fibers for racing mule production. A total of 33 animals [...] Read more.
Research on mule and donkey muscle composition remains limited despite their global importance as working equids. The objective of this study is to identify Mammoth donkey jacks with higher percentage of fast twitch fibers for racing mule production. A total of 33 animals were biopsied; however, only 12 samples were suitable for analysis, including racing mules (n = 7) and male Mammoth donkeys (n = 5). Animals were sedated with detomidine (10 µg/kg body weight) and butorphanol (20 µg/kg body weight). Middle gluteal muscle biopsies were collected using a 6 mm Bergström biopsy needle at a site located 20 cm dorsocaudal to the tuber coxae at a 45° angle to the base of the tail. Collection depth was 7.5 cm in adult mules and 5 cm in donkeys. Samples were prepared aseptically, anesthetized subcutaneously with lidocaine hydrochloride, and frozen in liquid nitrogen. Histochemical analysis included myosin adenosine triphosphatase (ATPase) staining at pH 9.5, 4.6, and 4.3. Fibers were classified as Type I, Type IIA, or Type IIB, and CSA measurements were obtained using NIH ImageJ software. Statistical analysis included group contrasts, summarized as mean ± SD with 95% confidence intervals, while Bayesian ANOVA outputs were presented as exploratory evidence summaries. Type IIA fibers were greater in mules (47.84 ± 7.30%) than donkeys (38.47 ± 4.48%). Results suggest that differences in equid muscle architecture may be associated with variation in Type IIA fiber composition related to work or use. Full article
(This article belongs to the Special Issue Current Research on Donkeys and Mules: Second Edition)
Show Figures

Figure 1

15 pages, 2788 KB  
Article
Palmitic Acid Alters Longitudinal Bone Growth While Enhancing Matrix Maturation in an Organotypic Bone Model
by Lukas Poskevicius, Victor Martin, João Gabriel Cardoso, Gintaras Juodžbalys and Pedro Sousa Gomes
Biomolecules 2026, 16(5), 746; https://doi.org/10.3390/biom16050746 - 19 May 2026
Viewed by 346
Abstract
Palmitic acid (PA), the most abundant saturated fatty acid in the human body, is implicated in lipotoxicity under hyperlipidemic conditions, with potential consequences for bone metabolism. To investigate its impact on developing bone tissue, this study used an ex vivo organotypic embryonic chick [...] Read more.
Palmitic acid (PA), the most abundant saturated fatty acid in the human body, is implicated in lipotoxicity under hyperlipidemic conditions, with potential consequences for bone metabolism. To investigate its impact on developing bone tissue, this study used an ex vivo organotypic embryonic chick femur model, exposing femora to control (0 µM), low (50 µM), and high (200 µM) PA concentrations. A multimodal approach, integrating microtomographic, histochemical, ultrastructural, and gene expression analyses, was used to assess tissue architecture, matrix composition, mineralization, and molecular adaptations. PA exposure significantly reduced longitudinal femoral growth, as evidenced by decreased femoral length and tissue volume. Gene expression analysis revealed reduced expression of selected osteogenic differentiation-related markers, including RUNX2, BMP2, and SPP1. However, COL1A2 expression was upregulated, correlating with increased collagenous matrix deposition and enhanced mineralization in PA-treated groups. Alcian blue staining further suggested reduced proteoglycan-rich cartilage matrix, particularly at 200 µM PA. Additionally, PA modulated the expression of both pro-inflammatory and anti-inflammatory mediators, along with increased autophagy-associated responses, as suggested by the upregulation of autophagy-related genes and the presence of autophagosomes and autolysosomes. These findings indicate that PA does not simply exert a deleterious effect on bone tissue but rather redirects the developmental trajectory of the organotypic femur by reducing longitudinal growth while promoting collagen-rich matrix maturation and mineral compaction. This response may involve altered cartilage-associated endochondral processes, fatty-acid-driven metabolic adaptation, osteoblast/osteocyte maturation, and autophagy-associated matrix processing under lipid-enriched conditions. Full article
(This article belongs to the Section Lipids)
Show Figures

Graphical abstract

16 pages, 54131 KB  
Case Report
Mapping Sanfilippo Syndrome: A Multisystem Clinicopathological Autopsy
by Mioara-Florentina Trandafirescu, Elena-Roxana Avădănei, Nina Filip, Catalina Iulia Saveanu, Iolanda Foia, Vasilica Toma, Livia Genoveva Baroi, Dana-Teodora Anton-Paduraru, Stefana Maria Moisa and Ludmila Lozneanu
Diagnostics 2026, 16(10), 1527; https://doi.org/10.3390/diagnostics16101527 - 18 May 2026
Viewed by 384
Abstract
Background/Objectives: Mucopolysaccharidosis type III (MPS III, Sanfilippo syndrome) is an autosomal recessive lysosomal storage disorder caused by deficiencies in enzymes required for heparan sulfate degradation. While primarily recognized for its devastating neurodegenerative course, the systemic extent of glycosaminoglycan (GAG) accumulation remains under-characterized. [...] Read more.
Background/Objectives: Mucopolysaccharidosis type III (MPS III, Sanfilippo syndrome) is an autosomal recessive lysosomal storage disorder caused by deficiencies in enzymes required for heparan sulfate degradation. While primarily recognized for its devastating neurodegenerative course, the systemic extent of glycosaminoglycan (GAG) accumulation remains under-characterized. This study aims to provide a detailed multisystemic pathological mapping of MPS III to challenge the traditional “brain-only” disease paradigm and highlight the clinical relevance of extracerebral involvement. Methods: We present a comprehensive clinicopathological analysis of a 15-year-old female patient with a history of profound neuropsychomotor delay, refractory epilepsy, and spastic tetraplegia. Following her death due to terminal bronchopneumonia during palliative care, a complete forensic and pathological autopsy was conducted. Tissue samples from all major organ systems were processed using routine Hematoxylin–Eosin (HE) staining, immunohistochemical staining for CD68, and specialized histochemical stains to identify intracellular storage products. Results: Macroscopic evaluation revealed significant diffuse cerebral atrophy, meningoencephalic edema, cardiac valvulopathy with compensatory myocardial remodeling, and hepatosplenomegaly. Furthermore, erosive gastrointestinal lesions and degenerative renal changes were identified. Histopathological examination confirmed widespread cytoplasmic vacuolization across diverse cell populations, including neurons, hepatocytes, renal tubular cells, and the reticuloendothelial system. These findings demonstrate that GAG deposition is a generalized process affecting nearly every parenchymal structure. Conclusions: Although neurological decline dominates the clinical phenotype, our findings underscore that MPS III is a true systemic storage disorder. Significant involvement of the cardiovascular and visceral systems contributes to the disease’s complexity and mortality. This case reinforces the critical diagnostic value of a comprehensive autopsy in delineating the full morphological spectrum of Sanfilippo syndrome, providing essential insights for multidisciplinary management. Full article
(This article belongs to the Section Pathology and Molecular Diagnostics)
Show Figures

Figure 1

18 pages, 4765 KB  
Article
Fruit Morphology and Seed Anatomy of Ormosia macrocalyx Ducke
by Jackelin Ruiz-Vidal, Georgina Vargas-Simón, Guillermo Angeles, José Ángel Gaspar-Génico, Lilia María Gama Campillo, Nelly del Carmen Jiménez-Pérez, Pablo Martínez-Zurimendi and Jesús Ascencio-Rivera
Seeds 2026, 5(3), 26; https://doi.org/10.3390/seeds5030026 - 30 Apr 2026
Viewed by 1178
Abstract
Ormosia macrocalyx grows in tropical forests and is endangered in Mexico. The species has ecological and economic importance. To evaluate the relationship between fruit length and seed number, Pearson correlation and principal component analysis were used. A linear mixed-effects model was also applied. [...] Read more.
Ormosia macrocalyx grows in tropical forests and is endangered in Mexico. The species has ecological and economic importance. To evaluate the relationship between fruit length and seed number, Pearson correlation and principal component analysis were used. A linear mixed-effects model was also applied. Pearson correlation, principal components analysis (PCA) and a Linear Mixed-Effects Model (LMM) were performed on an exploratory basis. In addition, seed coat and cotyledon anatomy were examined, and histochemical tests for secondary metabolites were carried out. Two high correlations and two components were obtained from the PCA, and the LMM showed that fruit length influenced the number of seeds per fruit. In the seed coats, differentiated layers of macrosclereids and osteosclereids were identified, where the hilar region presented macrosclereids and a pyriform bar of tracheids, the reserved cotyledons showed double-walled cells and simple plasmodesmata, the histochemical analyses demonstrated the presence of cellulose, condensed tannins, lipids, alkaloids, and proteins, and no starch was present. This study provides the first description of seed coat and cotyledon anatomy in O. macrocalyx, as well as the first report of secondary metabolites in storage cotyledons. These results could be useful for further studies of this species. Full article
Show Figures

Figure 1

18 pages, 3733 KB  
Article
Cerebrospinal Fluid Sediments as a Novel Tool for Potential Biomarkers of Neurodegenerative Diseases
by Raquel Alsina, Marta Riba, Marina Sartorio, Clara Romera, Berta Vilaplana, Eva Prats, Laura Molina-Porcel, Jaume del Valle, Carme Pelegrí and Jordi Vilaplana
Int. J. Mol. Sci. 2026, 27(8), 3692; https://doi.org/10.3390/ijms27083692 - 21 Apr 2026
Viewed by 766
Abstract
Cerebrospinal fluid (CSF) biomarkers for neurodegenerative diseases have been extensively studied over the years. However, CSF samples are routinely centrifuged, and the resulting sediment or pellet is typically discarded to remove cellular debris and high-density particles. This standard practice raises a critical question: [...] Read more.
Cerebrospinal fluid (CSF) biomarkers for neurodegenerative diseases have been extensively studied over the years. However, CSF samples are routinely centrifuged, and the resulting sediment or pellet is typically discarded to remove cellular debris and high-density particles. This standard practice raises a critical question: Could these discarded sediments harbour potential biomarkers? The aim of the present study is to demonstrate that CSF sediments contain specific brain-derived components and thus to substantiate the possible presence of biomarkers within these sediments. To this end, we analysed post-mortem CSF samples of one patient with neuropathologically confirmed Alzheimer’s disease (AD) and one patient with confirmed progressive supranuclear palsy (PSP). CSF pellets were studied using transmission and scanning electron microscopy techniques (TEM and SEM, respectively), along with compositional analysis through SEM combined with energy-dispersive X-ray spectroscopy (SEM-EDX), as well as immunofluorescence and histochemical analyses on semithin pellet sections. We observed that, among others, CSF pellets contain brain-derived structures such as wasteosomes and psammoma bodies. Furthermore, we also found disease-relevant proteins, including tau and Aβ42 in the AD sediment and tau in the PSP sediment. Although further studies are required, the study of CSF pellets could open new avenues for biomarker discovery in neurodegenerative diseases. Full article
Show Figures

Figure 1

18 pages, 3381 KB  
Article
Functional Characterization of the VvPHT1 Gene and Its Promoter in Vicia villosa
by Shuqin Tang, Linlin Mao, Ruili Zhu, Moli Zheng, Shaojun Qiu, Dali Song and Jingwen Sun
Agronomy 2026, 16(8), 824; https://doi.org/10.3390/agronomy16080824 - 17 Apr 2026
Viewed by 410
Abstract
Phosphorus deficiency in the environment induces phosphate (Pi) starvation responses of plants, in which the phosphate transporter is one of the most critical functional genes in this response mechanism. As a prevalent green manure crop in China, Vicia villosa plays a critical role [...] Read more.
Phosphorus deficiency in the environment induces phosphate (Pi) starvation responses of plants, in which the phosphate transporter is one of the most critical functional genes in this response mechanism. As a prevalent green manure crop in China, Vicia villosa plays a critical role in sustainable agricultural systems, and the expression of its phosphate transporter gene (VvPHT1) is modulated by soil phosphorus availability, highlighting its key adaptive function in nutrient acquisition and utilization under low-Pi conditions. Functional studies of this gene and its promoter contribute to exploring the molecular mechanisms of the tolerance of green manure crops to low phosphorus stress and to improving phosphorus-efficient V. villosa varieties. In this study, analysis of the VvPHT1 promoter sequence revealed a 1524 bp region containing multiple root-specific cis-regulatory elements, including five NODCON2GM, one NODCON1GM, six OSE2ROOTNODULE, one OSE1ROOTNODULE, and fifteen ROOTMOTIFTAPOX1 motifs. Histochemical GUS staining of transgenic Arabidopsis (Arabidopsis thaliana (L.) Heynh.) showed that the VvPHT1 promoter directed root-specific expression of the GUS reporter gene. A fusion expression vector pCAMBIA1300-VvPHT1--GFP was constructed and transformed into tobacco (Nicotiana tabacum L.) cells for subcellular localization analysis, indicating that the protein encoded by VvPHT1 was localized to the plasma membrane. To quantify its expression, VvPHT1 transcript levels in VvPHT1-overexpressing Arabidopsis (OEPHT1) lines were analyzed by quantitative real-time PCR (qRT-PCR) under different phosphorus supply conditions. The results demonstrated that under low-Pi conditions, the expression of VvPHT1 was significantly upregulated in the OEPHT1 lines compared to those of normal-Pi conditions. Furthermore, under low-Pi treatment, the OEPHT1 lines showed significantly increased fresh weight, primary root length, phosphorus content, and chlorophyll content compared to the wild-type Arabidopsis (WT), while no such differences were observed under normal-Pi conditions. In conclusion, the VvPHT1 promoter exhibits root-specific activity, and the VvPHT1 gene encodes a plasma-membrane-localized phosphate transporter that is strongly induced by phosphorus deficiency. Its overexpression enhances phosphorus uptake and plant growth under low-Pi conditions, suggesting that VvPHT1 likely functions as a high-affinity phosphate transporter involved in the adaptation to phosphorus starvation. Full article
(This article belongs to the Section Crop Breeding and Genetics)
Show Figures

Figure 1

29 pages, 20703 KB  
Article
Habitat-Adapted Endophytic Fusarium clavum EeR24 from the Arava Desert Induces Resistance Against Fusarium Wilt of Muskmelons
by Vineet Meshram, Meirav Elazar, Marcel Maymon, Gunjan Sharma, Eduard Belausov, Dana Charuvi, Mahiti Gupta, Soniya Goyal, Surbhi Goel and Stanley Freeman
Microorganisms 2026, 14(4), 871; https://doi.org/10.3390/microorganisms14040871 - 12 Apr 2026
Viewed by 918
Abstract
Muskmelon (Cucumis melo) is a widely cultivated and economically important fruit crop that is severely affected by Fusarium wilt caused by Fusarium oxysporum f. sp. melonis (race 1.2) (Fom). Conventional management practices have shown limited effectiveness and pose environmental and health [...] Read more.
Muskmelon (Cucumis melo) is a widely cultivated and economically important fruit crop that is severely affected by Fusarium wilt caused by Fusarium oxysporum f. sp. melonis (race 1.2) (Fom). Conventional management practices have shown limited effectiveness and pose environmental and health risks; therefore, sustainable and eco-friendly alternatives are required to manage this disease. In the present study, 23 endophytic fungal isolates belonging to eight genera were isolated from Ecballium elaterium and screened to determine antifungal potential against Fom using an in vitro antagonistic assay. Two endophytic isolates (Fusarium sp. EeR4 and Fusarium clavum EeR24) exhibited an inhibitory effect against Fom on quarter-strength PDA plates. In growth chamber experiments, F. clavum EeR24-colonized melon seedlings and significantly protected plants from wilting compared to non-colonized pathogen-challenged seedlings. Under greenhouse conditions, F. clavum EeR24 significantly improved morphological and physiological traits, including plant height, weight, number of leaves, membrane stability, photosynthesis, stomatal conductance, and transpiration, in Cucumis melo. Endophytic colonization improved catalase (56%), guaiacol peroxide (47%), and superoxide dismutase activity (25%), and increased flavonoid and phenolic content by 11–59% compared to non-colonized Fom-challenged plants. Lipid peroxidation significantly decreased by 37% and proline accumulation increased by 70% in colonized plants compared to non-colonized plants. Histochemical analysis also indicated that endophytic colonization considerably reduced the levels of H2O2, O2, malondialdehyde, and cell mortality in Fom-challenged plants. In addition, the culture filtrate and organic residues of F. clavum EeR24 inhibited the mycelial growth of Fom by 52–58%, respectively. Furthermore, a study on spatial colonization of the endophyte and the pathogen using GFP and RFP tagging indicated that both the endophyte and the pathogen simultaneously colonized the root tissues of C. melo; however, the endophyte significantly reduced the pathogenicity of Fom. These results suggest that endophytic F. clavum EeR24 may be developed as an effective biocontrol agent for the management of Fusarium wilt in melon plants under field conditions. Full article
Show Figures

Figure 1

17 pages, 3673 KB  
Article
Nitrogen Fertilizer Affects Culm Lodging Resistance by Regulating Phenylpropanoid Metabolism in Rice
by Fei Weng, Yi Wang, Qingkui Li, Yanfeng Ding and Ganghua Li
Agronomy 2026, 16(7), 765; https://doi.org/10.3390/agronomy16070765 - 5 Apr 2026
Viewed by 646
Abstract
Excessive nitrogen (N) fertilization is widely used to increase rice yield, but it often leads to lodging by weakening culm strength. This study aimed to elucidate the structural and molecular mechanisms underlying nitrogen-induced changes in culm lodging resistance in rice. Field and pot [...] Read more.
Excessive nitrogen (N) fertilization is widely used to increase rice yield, but it often leads to lodging by weakening culm strength. This study aimed to elucidate the structural and molecular mechanisms underlying nitrogen-induced changes in culm lodging resistance in rice. Field and pot experiments with two nitrogen levels were conducted using a randomized design with three biological replicates to evaluate the effects of high nitrogen application on culm mechanical properties, secondary cell wall development, and associated metabolic pathways. Mechanical measurements and microscopic analysis revealed that high nitrogen significantly reduced culm rigidity and impaired sclerenchyma development. To investigate the underlying mechanisms, integrated transcriptomic and proteomic analyses were performed on developing internodes. Differentially expressed genes and proteins were predominantly enriched in carbohydrate metabolism and phenylpropanoid biosynthesis pathways. Notably, key enzymes involved in lignin biosynthesis were consistently downregulated at the protein level under high-nitrogen conditions. In contrast, genes and proteins related to cellulose and hemicellulose biosynthesis exhibited transient inhibition at early stages followed by recovery or upregulation at later stages. Consistent with these findings, histochemical staining and quantitative assays demonstrated a significant reduction (14–16%) in lignin content in the fourth internode, whereas cellulose content showed no substantial change. Furthermore, lignin biosynthetic genes (OsCAD2, Os4CL3, and OsCOMT) were persistently suppressed during critical stages of secondary wall formation, while cellulose synthase genes (OsCESA4, OsCESA7, and OsCESA9) displayed more variable and less sustained expression patterns. Collectively, these results demonstrate that excessive nitrogen application weakens rice culms primarily by inhibiting lignin accumulation rather than cellulose deposition. The preferential suppression of the phenylpropanoid pathway and disruption of secondary cell wall formation provide a mechanistic basis for nitrogen-induced lodging susceptibility in rice. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
Show Figures

Figure 1

18 pages, 5689 KB  
Article
Foundation for Bioproduction: Secretory Stages, Metabolite Profiles and Gene Function of Glandular Trichomes in Cucumber
by Yuming Dong, Jiancai Mao, Xue Feng, Zhigang Tang, Li Shan, Sen Li, Yaru Wang, Yongdong Sun, Huazhong Ren and Xingwang Liu
Int. J. Mol. Sci. 2026, 27(7), 3276; https://doi.org/10.3390/ijms27073276 - 4 Apr 2026
Viewed by 501
Abstract
Glandular trichomes (GTs) are epidermal outgrowths that function as “natural cell factories” for the synthesis of specialized metabolites. Beyond their traditional understanding, GTs on cucumber fruits can form an undesirable trait known as bloom, which negatively affects market value. However, the secretory process, [...] Read more.
Glandular trichomes (GTs) are epidermal outgrowths that function as “natural cell factories” for the synthesis of specialized metabolites. Beyond their traditional understanding, GTs on cucumber fruits can form an undesirable trait known as bloom, which negatively affects market value. However, the secretory process, metabolite profiles, and genetic regulation underlying GT development in cucumber remain largely unclear. In this study, we employed scanning electron microscopy (SEM), transmission electron microscopy (TEM), histochemical staining, multi-omics analyses, and liquid chromatography–mass spectrometry (LC-MS) to systematically investigate GT development. The secretory process was classified into four distinct stages via SEM observations: morphogenesis, active metabolism, head sunken, and metabolite release. TEM revealed progressive ultrastructural changes, including increased organelle abundance and expansion of the periplasmic space, which facilitate metabolite transport and release. This process occurs through an autonomous mechanism involving osmiophilic substances and eventual cell rupture. LC-MS analysis identified 744 metabolites belonging to 11 classes, with phenylpropanoids/polyketides—particularly flavonoids—being the most abundant. While metabolite classes are conserved between European greenhouse and North China ecotypes, specific metabolite contents vary significantly. Multi-transcriptome analysis identified 60 candidate genes associated with GT development. Among these, CsaV4_3G003418 was functionally validated through virus-induced gene silencing (VIGS) to be involved in early GT development. Collectively, this work elucidates the secretory mechanism and metabolic characteristics of cucumber GTs, providing a foundation for future functional studies and biotechnological applications of secondary metabolites. Full article
(This article belongs to the Section Molecular Plant Sciences)
Show Figures

Figure 1

10 pages, 2333 KB  
Communication
Agrobacterium-Mediated Genetic Transformation of the Edible and Medicinal Cauliflower Mushroom Sparassis latifolia
by Wen Cao, Xinyu Zhou, Ruiheng Yang, Yingying Wu, Yan Li, Chenli Zhou, Jianing Wan, Rongping Li, Xiangying Luo, Zhenhui Shen, Dapeng Bao, Lihua Tang and Junjun Shang
J. Fungi 2026, 12(4), 255; https://doi.org/10.3390/jof12040255 - 1 Apr 2026
Cited by 1 | Viewed by 1024
Abstract
Sparassis latifolia is an edible and medicinal mushroom with significant economic value, now commercially cultivated on a large scale in China. However, current cultivars face challenges, including an extended mycelial growth period and unstable fruiting body yields. Advances in molecular breeding and functional [...] Read more.
Sparassis latifolia is an edible and medicinal mushroom with significant economic value, now commercially cultivated on a large scale in China. However, current cultivars face challenges, including an extended mycelial growth period and unstable fruiting body yields. Advances in molecular breeding and functional genomics for this species are hindered by the absence of a reliable genetic transformation system. In this study, we first determined that S. latifolia is highly sensitive to carboxin and hygromycin, two selective agents commonly used in fungal genetics. We subsequently constructed a novel binary vector, pCbxHyg, harboring a carboxin resistance cassette driven by its native Pleurotus eryngii promoter and a hygromycin resistance cassette under the control of the P. eryngii Glycerol 3-phosphate dehydrogenase (GPD) gene promoter. Initial transformation attempts using Agrobacterium-mediated transformation of liquid-cultured mycelial pellets were unsuccessful. During microscopic examination, we discovered that S. latifolia mycelia produce abundant asexual chlamydospores. Using these chlamydospores as recipient material, we efficiently and reproducibly obtained transformants with the pCbxHyg vector under both carboxin and hygromycin selection. This method highlights the advantage of using asexual spores of Basidiomycetes as recipients for genetic transformation. PCR analysis confirmed the stable integration of the exogenous resistance genes into the fungal genome. The functionality of the system was further validated by transforming chlamydospores with a vector carrying a β-glucuronidase (GUS) reporter gene, whose expression was confirmed via histochemical staining of the resulting transformant mycelia. This work establishes the first successful Agrobacterium-mediated genetic transformation system for S. latifolia, providing a foundational platform for future gene function studies and molecular breeding efforts. Full article
(This article belongs to the Section Fungal Genomics, Genetics and Molecular Biology)
Show Figures

Figure 1

Back to TopTop