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Keywords = extract-dilute-shoot

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21 pages, 5182 KiB  
Article
Harnessing Phosphocompost Extracts to Mitigate Meloidogyne javanica Impacts on Tomato
by El Mehdi Bouchtaoui, Ayoub Haouas, Mouna Fahr, Aouatif Benali, Abdelfattah A. Dababat, Ayoob Obaid Alfalahi, Khalid Khfif, Abdelmjid Zouahri, Driss Iraqi, Khalid Azim, Abdelaziz Smouni and Fouad Mokrini
Agriculture 2025, 15(11), 1184; https://doi.org/10.3390/agriculture15111184 - 30 May 2025
Viewed by 895
Abstract
This study evaluated the chemical properties of phosphocompost extracts and their effectiveness in inducing tomato seedlings resistance to Meloidogyne javanica. Phosphocomposts: Sugar beet phosphocompost (PC-SB: CP2), green waste phosphocompost (PC-GW: CP3), and olive mill waste phosphocompost (PC-OMW: CP4), were utilized to produce [...] Read more.
This study evaluated the chemical properties of phosphocompost extracts and their effectiveness in inducing tomato seedlings resistance to Meloidogyne javanica. Phosphocomposts: Sugar beet phosphocompost (PC-SB: CP2), green waste phosphocompost (PC-GW: CP3), and olive mill waste phosphocompost (PC-OMW: CP4), were utilized to produce compost water extracts at concentrations of 1:5, 1:10, 1:20, and 1:100 g:mL and then applied as soil drenches for tomato seedlings one-week post-inoculation. The CP2 extract applied at a 1:5 dilution led to marked improvements in growth parameters, with plant height increasing by over 52.2%, shoot fresh biomass rising by approximately 52.44%, and shoot dry biomass showing a gain of 62.21%. Root biomass also rose by 33%. Chlorophyll a increased with CP4 at 1:5 and 1:100 (41.05% and 37.32%), chlorophyll b increased with CP3 at 1:5 and 1:10 (22.34% and 7.59%), while carotenes showed no variation. Polyphenols rose by 86.45–91.01% with CP2 from 1:5 to 1:20, and flavonoids increased by 64.90% with CP4 at 1:10. CP2 diminished the ultimate M. javanica population and reproduction factor by 171.43%, while CP4 at 1:20 decreased egg masses by 151.94%. The root gall index showed no variation. The chemical composition of phosphocomposts revealed that the strategic incorporation of diverse organic improvers (10%) in phosphocomposts yielded distinct nutrient signatures, with sugar beet waste enhancing PO43− (12.91 mg/L) and secondary macronutrients, green waste optimizing NO3 (69.91 mg/L) and SO42− (62.70 mg/L) availability, and olive mill waste producing superior micronutrient concentrations alongside dominant Ca (24.21 mg/L), K (392.50 mg/L), and P (9.17 mg/L) levels. Overall, the results underscore the potential of phosphocompost extracts as a viable, low-cost, and eco-friendly alternative to synthetic nematicides, offering a sustainable and resilient approach to M. javanica control while enhancing tomato plant growth. Full article
(This article belongs to the Special Issue Approaches for Plant-Parasitic Nematode Control)
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14 pages, 1690 KiB  
Article
Metabolomic Profiling of Human Urine Related to Mycotoxin Exposure
by Nuria Dasí-Navarro, Sonia Lombardi, Pilar Vila-Donat, Sabrina Llop, Jesus Vioque, Raquel Soler-Blasco, Ana Esplugues, Lara Manyes and Manuel Lozano
Toxins 2025, 17(2), 75; https://doi.org/10.3390/toxins17020075 - 8 Feb 2025
Cited by 1 | Viewed by 1161
Abstract
Human exposure to mycotoxins is a global concern since several mycotoxins, such as enniatins and aflatoxins, have shown carcinogenic and neurotoxic effects, and the toxicologic mechanisms of most of them still need to be clarified. This study aims to investigate the metabolic pathways [...] Read more.
Human exposure to mycotoxins is a global concern since several mycotoxins, such as enniatins and aflatoxins, have shown carcinogenic and neurotoxic effects, and the toxicologic mechanisms of most of them still need to be clarified. This study aims to investigate the metabolic pathways affected by mycotoxin exposure by evaluating metabolite alterations in urine. The participants were 540 women from the Spanish Childhood and Environment Project (INMA). For metabolite identification, a dilute and shoot extraction, followed by HPLC-Q-TOF-MS identification analysis, was performed. Data were processed using Agilent Mass Hunter Workstation with the METLIN database, Agilent Mass Profiler Professional 10.0, and Metaboanalyst 6.0. Over 2000 metabolites were obtained in each sample after feature extraction, and the most significant metabolites (p-value ≤ 0.05, fold change ≥ 2.0) were considered for pathway analysis. Enrichment analysis and topology showed that the most significantly affected pathway was the biosynthesis of unsaturated fatty acids (adjusted p-value = 0.007), with four metabolomic hits associated: linoleic acid, octadecanoic acid/stearic acid, an arachidonic acid metabolite, and (9Z)-octadecenoic acid/oleic acid. Other related pathways (unadjusted p-value ≤ 0.1) included fatty acid biosynthesis, glycerophospholipid metabolism, and ether lipid metabolism. The present study highlights the importance of metabolomics in increasing knowledge of the toxicity mechanisms and health effects of mycotoxins, especially emerging ones. Full article
(This article belongs to the Section Mycotoxins)
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23 pages, 8812 KiB  
Article
Spectrophotometric and Chromatographic Assessment of Total Polyphenol and Flavonoid Content in Rhododendron tomentosum Extracts and Their Antioxidant and Antimicrobial Activity
by Halyna Kukhtenko, Nataliia Bevz, Yulian Konechnyi, Oleksandr Kukhtenko and Izabela Jasicka-Misiak
Molecules 2024, 29(5), 1095; https://doi.org/10.3390/molecules29051095 - 29 Feb 2024
Cited by 16 | Viewed by 3477
Abstract
In the literature, the chemical composition of Rhododendron tomentosum is mainly represented by the study of isoprenoid compounds of essential oil. In contrast, the study of the content of flavonoids will contribute to the expansion of pharmacological action and the use of the [...] Read more.
In the literature, the chemical composition of Rhododendron tomentosum is mainly represented by the study of isoprenoid compounds of essential oil. In contrast, the study of the content of flavonoids will contribute to the expansion of pharmacological action and the use of the medicinal plant for medical purposes. The paper deals with the technology of extracts from Rh. tomentosum shoots using ethanol of various concentrations and purified water as an extractant. Extracts from Rh. tomentosum were obtained by a modified method that combined the effects of ultrasound and temperature to maximize the extraction of biologically active substances from the raw material. Using the method of high-performance thin-layer chromatography in a system with solvents ethyl acetate/formic acid/water (15:1:1), the following substances have been separated and identified in all the extracts obtained: rutin, hyperoside, quercetin, and chlorogenic acid. The total polyphenol content (TPC) and total flavonoid content (TFC) were estimated using spectrophotometric methods involving the Folin-Ciocalteu (F-C) reagent and the complexation reaction with aluminum chloride, respectively. A correlation analysis was conducted between antioxidant activity and the polyphenolic substance content. Following the DPPH assay, regression analysis shows that phenolic compounds contribute to about 80% (r2 = 0.8028, p < 0.05) of radical scavenging properties in the extract of Rh. tomentosum. The extract of Rh. tomentosum obtained by ethanol 30% inhibits the growth of test cultures of microorganisms in 1:1 and 1:2 dilutions of the clinical strains #211 Staphylococcus aureus and #222 Enterococcus spp. and the reference strain Pseudomonas aeruginosa ATCC 10145. Full article
(This article belongs to the Special Issue Functional Evaluation of Bioactive Compounds from Natural Sources)
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31 pages, 2045 KiB  
Article
Specific Antimicrobial Activities Revealed by Comparative Evaluation of Selected Gemmotherapy Extracts
by Melinda Héjja, Emőke Mihok, Amina Alaya, Maria Jolji, Éva György, Noemi Meszaros, Violeta Turcus, Neli Kinga Oláh and Endre Máthé
Antibiotics 2024, 13(2), 181; https://doi.org/10.3390/antibiotics13020181 - 13 Feb 2024
Cited by 4 | Viewed by 5030
Abstract
Nowadays, unprecedented health challenges are urging novel solutions to address antimicrobial resistance as multidrug-resistant strains of bacteria, yeasts and moulds are emerging. Such microorganisms can cause food and feed spoilage, food poisoning and even more severe diseases, resulting in human death. In order [...] Read more.
Nowadays, unprecedented health challenges are urging novel solutions to address antimicrobial resistance as multidrug-resistant strains of bacteria, yeasts and moulds are emerging. Such microorganisms can cause food and feed spoilage, food poisoning and even more severe diseases, resulting in human death. In order to overcome this phenomenon, it is essential to identify novel antimicrobials that are naturally occurring, biologically effective and increasingly safe for human use. The development of gemmotherapy extracts (GTEs) using plant parts such as buds and young shoots has emerged as a novel approach to treat/prevent human conditions due to their associated antidiabetic, anti-inflammatory and/or antimicrobial properties that all require careful evaluations. Seven GTEs obtained from plant species like the olive (Olea europaea L.), almond (Prunus amygdalus L.), black mulberry (Morus nigra L.), walnut (Juglans regia L.), blackberry (Rubus fruticosus L.), blackcurrant (Ribes nigrum L.) and bilberry (Vaccinium myrtillus L.) were tested for their antimicrobial efficiency via agar diffusion and microbroth dilution methods. The antimicrobial activity was assessed for eight bacterial (Bacillus cereus, Staphylococcus aureus, Salmonella enterica subsp. enterica, Proteus vulgaris, Enterococcus faecalis, Escherichia coli, Pseudomonas aeruginosa and Listeria monocytogenes), five moulds (Aspergillus flavus, Aspergillus niger, Aspergillus ochraceus, Penicillium citrinum, Penicillium expansum) and one yeast strain (Saccharomyces cerevisiae). The agar diffusion method revealed the blackberry GTE as the most effective since it inhibited the growth of three bacterial, four moulds and one yeast species, having considered the total number of affected microorganism species. Next to the blackberry, the olive GTE appeared to be the second most efficient, suppressing five bacterial strains but no moulds or yeasts. The minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) were then determined for each GTE and the microorganisms tested. Noticeably, the olive GTE appeared to feature the strongest bacteriostatic and bactericidal outcome, displaying specificity for S. aureus, E. faecalis and L. monocytogenes. The other GTEs, such as blueberry, walnut, black mulberry and almond (the list indicates relative strength), were more effective at suppressing microbial growth than inducing microbial death. However, some species specificities were also evident, while the blackcurrant GTE had no significant antimicrobial activity. Having seen the antimicrobial properties of the analysed GTEs, especially the olive and black mulberry GTEs, these could be envisioned as potential antimicrobials that might enhance antibiotic therapies efficiency, while the blackberry GTE would act as an antifungal agent. Some of the GTE mixtures analysed have shown interesting antimicrobial synergies, and all the antimicrobial effects observed argue for extending these studies to include pathological microorganisms. Full article
(This article belongs to the Special Issue Antimicrobial Activity of Natural Products and Plants Extracts)
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12 pages, 1151 KiB  
Article
An Ultra-High-Performance Liquid Chromatography Coupled with Tandem Mass Spectrometry Method with Online Solid-Phase Extraction Sample Preparation for the High-Throughput and Sensitive Determination of Ostarine in Human Urine
by Kristián Slíž, Juraj Piešťanský and Peter Mikuš
Methods Protoc. 2024, 7(1), 10; https://doi.org/10.3390/mps7010010 - 23 Jan 2024
Cited by 2 | Viewed by 2760
Abstract
Ostarine is frequently misused as a selective androgen receptor modulator (SARM) in sports. Consequently, there is a pressing need for reliable and simple approaches to monitor its presence in biological systems. In this work, we developed a two-dimensional analytical method utilizing online solid-phase [...] Read more.
Ostarine is frequently misused as a selective androgen receptor modulator (SARM) in sports. Consequently, there is a pressing need for reliable and simple approaches to monitor its presence in biological systems. In this work, we developed a two-dimensional analytical method utilizing online solid-phase extraction (online-SPE) in conjunction with ultra-high-performance liquid chromatography and tandem mass spectrometry (triple quadrupole). This automated 2D separation approach is characterized by minimum manual steps in the sample preparation (only dilute-and-shoot), reflecting high sample throughput and the reliability of analytical data. It provides favorable performance parameters, including a limit of detection of 0.5 pg/mL, high accuracy (relative error = 1.6–7.5%), precision (relative standard deviation = 0.8–4.5%), and sensitivity. Additionally, it demonstrates excellent linearity (r2 = 0.9999) in the calibration range of 0.05 to 25 ng/mL and robustness, with no carryover effects observed. This comparative study revealed a two-decadic-order-lower LOD of the SPE-UHPLC-MS/MS method to the corresponding UHPLC-MS/MS method and the lowest one in the group of currently published LC-MS methods. The World Anti-Doping Agency screening and confirmation criteria were met through the analysis of spiked urine samples from ten healthy volunteers. Accordingly, the proposed method is suitable for routine use in antidoping laboratories. Full article
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21 pages, 4868 KiB  
Article
Germination Behavior and Geographical Information System-Based Phenotyping of Root Hairs to Evaluate the Effects of Different Sources of Black Soldier Fly (Hermetia illucens) Larval Frass on Herbaceous Crops
by Rosanna Labella, Rocco Bochicchio, Rosangela Addesso, Donato Labella, Antonio Franco, Patrizia Falabella and Mariana Amato
Plants 2024, 13(2), 230; https://doi.org/10.3390/plants13020230 - 14 Jan 2024
Cited by 7 | Viewed by 2380
Abstract
Insect larval frass has been proposed as a fertilizer and amendment, but methods for testing its effects on plants are poorly developed and need standardization. We obtained different types of black soldier fly (Hermetia illucens) frass via the factorial combination of (a) [...] Read more.
Insect larval frass has been proposed as a fertilizer and amendment, but methods for testing its effects on plants are poorly developed and need standardization. We obtained different types of black soldier fly (Hermetia illucens) frass via the factorial combination of (a) two insect diets, as follows: G (Gainesville = 50% wheat bran, 30% alfalfa meal, 20% maize meal) and W (43% sheep whey + 57% seeds); (b) two frass thermal treatments: NT = untreated and T = treated at 70 °C for 1 h. We tested the effects on the germination of cress (Lepidium sativum L.) and wheat (Triticum durum Desf.) by applying 1:2 w:w water extracts at 0, 25, 50, 75 and 100% concentration. Standardizing frass water content before extraction affected chemical composition. Frass extracts showed high electrical conductivity (8.88 to 13.78 mS cm−1). The W diet was suppressive towards Escherichia coli and showed a lower content of nitrates (e.g., WNT 40% lower than GNT) and a concentration-dependent phytotoxic effect on germinating plants. At 25% concentration, germination indices of G were 4.5 to 40-fold those at 100%. Root and shoot length and root hair area were affected by diet and concentration of frass extracts (e.g., root and shoot length in cress at 25% were, respectively, 4.53 and 2 times higher than at 100%), whereas the effects of the thermal treatment were few or inconclusive. On barley (Hordeum vulgare L.) grown in micropots on a silty loam soil, root mass was reduced by 37% at high extract concentration. A quick procedure for root hair surface area was developed based on the geographic information system (GIS) and may provide a fast method for incorporating root hair phenotyping in frass evaluation. The results indicate that below-ground structures need to be addressed in research on frass effects. For this, phyotoxicity tests should encompass different extract dilutions, and frass water content should be standardized before extraction in the direction of canonical procedures to allow comparisons. Full article
(This article belongs to the Section Plant–Soil Interactions)
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20 pages, 3439 KiB  
Article
Phytochemical Analysis, In Vitro Biological Activities, and Computer-Aided Analysis of Potentilla nepalensis Hook Compounds as Potential Melanoma Inhibitors Based on Molecular Docking, MD Simulations, and ADMET
by Subhash Sharma, Vikas Kumar, Muhammad Yaseen, Amr S. Abouzied, Abgeena Arshad, Mashooq Ahmad Bhat, Ahmed M. Naglah, Chirag N. Patel, Prasanth Kumar Sivakumar, Anuradha Sourirajan, Adnan Shahzad and Kamal Dev
Molecules 2023, 28(13), 5108; https://doi.org/10.3390/molecules28135108 - 29 Jun 2023
Cited by 6 | Viewed by 2990
Abstract
Potentilla nepalensis Hook is a perennial Himalayan medicinal herb of the Rosaceae family. The present study aimed to evaluate biological activities such as the antioxidant, antibacterial, and anticancer activities of roots and shoots of P. nepalensis and its synergistic antibacterial activity with antibacterial [...] Read more.
Potentilla nepalensis Hook is a perennial Himalayan medicinal herb of the Rosaceae family. The present study aimed to evaluate biological activities such as the antioxidant, antibacterial, and anticancer activities of roots and shoots of P. nepalensis and its synergistic antibacterial activity with antibacterial drugs. Folin–Ciocalteau and aluminium chloride methods were used for the calculation of total phenolic (TPC) and flavonoid content (TFC). A DPPH radical scavenging assay and broth dilution method were used for the determination of the antioxidant and antibacterial activity of the root and shoot extracts of P. nepalensis. Cytotoxic activity was determined using a colorimetric MTT assay. Further, phytochemical characterization of the root and shoot extracts was performed using the Gas chromatography–mass spectrophotometry (GC-MS) method. The TPC and TFC were found to be higher in the methanolic root extract of P. nepalensis. The methanolic shoot extract of P. nepalensis showed good antioxidant activity, while then-hexane root extract of P. nepalensis showed strong cytotoxic activity against tested SK-MEL-28 cells. Subsequently, in silico molecular docking studies of the identified bioactive compounds predicted potential anticancer properties. This study can lead to the production of new herbal medicines for various diseases employing P. nepalensis, leading to the creation of new medications. Full article
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10 pages, 1280 KiB  
Article
N-Nitrosamine Impurities in Ethalfluralin: Determination of an Overlooked Deleterious Source in Pesticides
by George P. Balayiannis and Helen Karasali
Agriculture 2023, 13(5), 1104; https://doi.org/10.3390/agriculture13051104 - 22 May 2023
Cited by 3 | Viewed by 2528
Abstract
N-nitrosamines are a class of carcinogenic chemical compound. Considering the large-scale application of agrochemicals globally, the elimination of N-nitrosamines from pesticides should be a priority for manufacturers and regulators. A set of methods was developed and validated for the determination of [...] Read more.
N-nitrosamines are a class of carcinogenic chemical compound. Considering the large-scale application of agrochemicals globally, the elimination of N-nitrosamines from pesticides should be a priority for manufacturers and regulators. A set of methods was developed and validated for the determination of the toxicologically relevant N-nitrosamine impurity of ethalfluralin (ethyl-N-(2-methylallyl) N-nitroso amine—EMANA) in 33% w v−1 emulsifiable concentrate (EC) formulations. Solid Phase Extraction (SPE) was compared with the “dilute and shoot” approach. Gas chromatography (GC) was combined with Flame Ionization Detection (FID) and mass spectrometry (MS). For MS, two mass filtering modes (Selective Ion Monitoring—SIM, tandem mass spectrometry—MS/MS) and two ionization modes (Electron Ionization—EI, Positive chemical ionization—PCI) were applied. It was concluded that, in the case of samples with high nitrosamine concentration (>90 μg g−1), the “dilute and shoot” approach can be applied without compromising the quality of the results. SPE, however, is required to attain the LOQ (0.33 μg g−1) with good recovery (97.4–110.67%), linearity (R > 0.99) and precision (%RSD 0.68–1.74). The LOQ supersedes the limit set by EFSA (1 μg g−1) in the Technical Active Substance—TAS. The concentration range of the methods is 0.05–110 μg g−1. The methods were applied for the official surveillance program of the Greek agrochemicals market. Full article
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14 pages, 348 KiB  
Article
Development and Validation of LC-Q-TOF-MS Methodology to Determine Mycotoxin Biomarkers in Human Urine
by Nuria Dasí-Navarro, Manuel Lozano, Sabrina Llop, Ana Esplugues, Alessandra Cimbalo, Guillermina Font, Lara Manyes, Jordi Mañes and Pilar Vila-Donat
Toxins 2022, 14(10), 651; https://doi.org/10.3390/toxins14100651 - 20 Sep 2022
Cited by 14 | Viewed by 3169
Abstract
Mycotoxin contamination of foodstuffs is a health concern worldwide and monitoring human exposure to mycotoxins is a key concern. Most mycotoxins and their metabolites are excreted in urine, but a reliable detection method is required, considering the low levels present in this biological [...] Read more.
Mycotoxin contamination of foodstuffs is a health concern worldwide and monitoring human exposure to mycotoxins is a key concern. Most mycotoxins and their metabolites are excreted in urine, but a reliable detection method is required, considering the low levels present in this biological sample. The aim of this work is to validate a sensitive methodology capable of simultaneously determining ten targeted mycotoxins as well as detecting untargeted ones by using Liquid Chromatography coupled to Quadrupole Time of Flight Mass Spectrometry (LC-Q-TOF-MS). The targeted mycotoxins were: enniatin A, B, A1, and B1, beauvericine, aflatoxin B1, B2, G1 and G2, and ochratoxin A. Several extraction procedures such as liquid-liquid extraction, dilute and shoot, and QuEChERS were assessed. Finally, a modified simple QuEChERS extraction method was selected. Creatinine adjustment and matrix-matched calibration curves are required. The limit of detection and limit of quantification values ranged from 0.1 to 1.5 and from 0.3 to 5 ng/mL, respectively. Recoveries achieved were higher than 65% for all mycotoxins. Later, the method was applied to 100 samples of women’s urine to confirm the applicability and determine their internal exposure. The untargeted mycotoxins most found were trichothecenes, zearalenones, and ochratoxins. Full article
(This article belongs to the Special Issue Occurrence and Determination of Mycotoxins)
20 pages, 2676 KiB  
Article
Development and Validation of an UHPLC-MS/MS Method for the Simultaneous Determination of 11 EU-Regulated Mycotoxins in Selected Cereals
by Marija Kovač, Ante Nevistić, Tihomir Kovač, Jurislav Babić, Antonija Šarić, Borislav Miličević, Mario Panjičko and Bojan Šarkanj
J. Fungi 2022, 8(7), 665; https://doi.org/10.3390/jof8070665 - 24 Jun 2022
Cited by 13 | Viewed by 3448
Abstract
The availability of reliable sensitive multi-analyte methods for unambiguous determination of mycotoxins is crucial for ensuring food and feed safety, considering their adverse health effects and (co-)occurrence in various foods. Accordingly, a multi-mycotoxin confirmatory method for simultaneous determination of 11 mycotoxins regulated in [...] Read more.
The availability of reliable sensitive multi-analyte methods for unambiguous determination of mycotoxins is crucial for ensuring food and feed safety, considering their adverse health effects and (co-)occurrence in various foods. Accordingly, a multi-mycotoxin confirmatory method for simultaneous determination of 11 mycotoxins regulated in cereals within the European Union (EU) using ultra-high performance liquid chromatography coupled to tandem mass spectrometry (UHPLC-MS/MS) was developed and in-house validated to fit the EU legislation requirements for analytical methods. A simple sample preparation was based on a solid–liquid extraction using a solvent mixture acetonitrile/water/formic acid (79/20/1, v/v/v) and a dilution of raw extract using water/acetonitrile/formic acid (79/20/1, v/v/v) before instrumental analysis. Average recoveries in all three validated cereal crop types (maize, wheat, and barley), spiked at multiple levels, were found acceptable for all analytes when matrix-matched calibration was used, ranging from 63.2% to 111.2% and also showing very good repeatability, with relative standard deviations below 20%. Matrix effect (SSE) evaluation revealed maize as the most complex of the three analyzed cereal matrices, with strong SSE (<50% and >150%) recorded for all 11 analyzed mycotoxins. An additional method verification was performed through successful participation in proficiency testing schemes, with the achieved z-scores generally in the acceptable range of −2 ≤ z ≤ 2. The obtained validation results demonstrated the suitability of the developed confirmatory multi-mycotoxin UHPLC-MS/MS method based on a dilute-and-shoot principle for the simultaneous determination of low concentrations of 11 EU-regulated mycotoxins in cereals, including aflatoxins B1, B2, G1 and G2, deoxynivalenol, fumonisins B1 and B2, zearalenone, T-2 and HT-2 toxins, and ochratoxin A. Full article
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10 pages, 1345 KiB  
Article
Plant Growth-Promoting Microorganism Pseudarthrobacter sp. NIBRBAC000502770 Enhances the Growth and Flavonoid Content of Geum aleppicum
by Seung Hee Ham, A Ra Yoon, Hyun Eui Oh and Yoo Gyeong Park
Microorganisms 2022, 10(6), 1241; https://doi.org/10.3390/microorganisms10061241 - 17 Jun 2022
Cited by 47 | Viewed by 3216
Abstract
Plant growth-promoting rhizobacteria are known to enhance the growth and antioxidant activity of several plants. However, the effects of such rhizobacteria on Geum aleppicum, a plant with pharmacological potential in Korea are unknown. In this study, we investigated the effects of Pseudarthrobacter [...] Read more.
Plant growth-promoting rhizobacteria are known to enhance the growth and antioxidant activity of several plants. However, the effects of such rhizobacteria on Geum aleppicum, a plant with pharmacological potential in Korea are unknown. In this study, we investigated the effects of Pseudarthrobacter sp. NIBRBAC000502770 treatment (100 mL/pot, every two weeks for 55 days), in the form of culture medium, 100−fold diluted culture, culture supernatant, and pelleted cells resuspended in water, on the growth, antibacterial activity and flavonoid content of G. aleppicum. The NIBRBAC000502770 strain showed high indole-3-acetic acid (IAA) content of 461.81 μg∙mL−1. The dry weight of the roots was significantly higher in the supernatant, diluted culture, and pellet-treated plants compared to that in the control plants. Additionally, the plant height, root length, leaf length, leaf width, chlorophyll content, biomass, and dry weight of the shoot were highest in the pellet-treated plants. Further, methanol extracts of pellet-treated plants showed significantly high flavonoid content compared to that in the control plants (28 mg∙g−1 vs. 7.5 mg∙g−1) and exhibited strong antibacterial activity against Gram-positive and negative bacteria. These results demonstrate the beneficial effects of Pseudarthrobacter sp. NIBRBAC000502770 on the growth and flavonoid content of G. aleppicum. Full article
(This article belongs to the Special Issue Plant-Bacteria Interactions)
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23 pages, 4488 KiB  
Article
Metabolic Footprinting of Microbial Systems Based on Comprehensive In Silico Predictions of MS/MS Relevant Data
by Alexander Reiter, Jian Asgari, Wolfgang Wiechert and Marco Oldiges
Metabolites 2022, 12(3), 257; https://doi.org/10.3390/metabo12030257 - 17 Mar 2022
Cited by 6 | Viewed by 3037
Abstract
Metabolic footprinting represents a holistic approach to gathering large-scale metabolomic information of a given biological system and is, therefore, a driving force for systems biology and bioprocess development. The ongoing development of automated cultivation platforms increases the need for a comprehensive and rapid [...] Read more.
Metabolic footprinting represents a holistic approach to gathering large-scale metabolomic information of a given biological system and is, therefore, a driving force for systems biology and bioprocess development. The ongoing development of automated cultivation platforms increases the need for a comprehensive and rapid profiling tool to cope with the cultivation throughput. In this study, we implemented a workflow to provide and select relevant metabolite information from a genome-scale model to automatically build an organism-specific comprehensive metabolome analysis method. Based on in-house literature and predicted metabolite information, the deduced metabolite set was distributed in stackable methods for a chromatography-free dilute and shoot flow-injection analysis multiple-reaction monitoring profiling approach. The workflow was used to create a method specific for Saccharomyces cerevisiae, covering 252 metabolites with 7 min/sample. The method was validated with a commercially available yeast metabolome standard, identifying up to 74.2% of the listed metabolites. As a first case study, three commercially available yeast extracts were screened with 118 metabolites passing quality control thresholds for statistical analysis, allowing to identify discriminating metabolites. The presented methodology provides metabolite screening in a time-optimised way by scaling analysis time to metabolite coverage and is open to other microbial systems simply starting from genome-scale model information. Full article
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11 pages, 2146 KiB  
Article
Development of a Simple, Underivatized Method for Rapid Determination of Free Amino Acids in Honey Using Dilute-and-Shoot Strategy and Liquid Chromatography-Tandem Mass Spectrometry
by Wen Ma, Bingxin Yang, Jun Li and Xianjiang Li
Molecules 2022, 27(3), 1056; https://doi.org/10.3390/molecules27031056 - 4 Feb 2022
Cited by 17 | Viewed by 4621
Abstract
A simple, fast and reliable analytical method was developed for 20 free amino acids (FAAs) determination in honey samples through a dilute-and-shoot strategy and hydrophilic interaction liquid chromatography tandem mass spectrometry. Compared with previous reports, direct dilution by water has significantly reduced the [...] Read more.
A simple, fast and reliable analytical method was developed for 20 free amino acids (FAAs) determination in honey samples through a dilute-and-shoot strategy and hydrophilic interaction liquid chromatography tandem mass spectrometry. Compared with previous reports, direct dilution by water has significantly reduced the matrix effect and facilitated full extraction of FAAs. Further, a 5 min determination method was established with an acetonitrile–water mobile phase system with 0.1% formic acid addition. The established method was validated and demonstrated several advantages including short detection time, wide linear range over 3–4 orders of magnitude, high sensitivity down to 0.1 ng/mL and negligible matrix effect. Twenty FAAs were determined in 10 honey samples from different botanical origins by this method, and 19 FAAs were found. This general applicable method was also promising for fast determination of FAAs in other practical samples. Full article
(This article belongs to the Section Analytical Chemistry)
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10 pages, 1360 KiB  
Article
Suitability of On-Farm Green Compost for the Production of Baby Leaf Species
by Enrica De Falco, Antonella Vitti, Giuseppe Celano and Domenico Ronga
Horticulturae 2021, 7(11), 512; https://doi.org/10.3390/horticulturae7110512 - 20 Nov 2021
Cited by 9 | Viewed by 3211
Abstract
This study evaluated, for the first time, the suitability of on-farm green compost (GC) from the fourth range sector for the production, in a controlled environment, of six baby leaf species (radish, lettuce, rocket, chard, sorrel and dill), characterized by short cultivation cycles. [...] Read more.
This study evaluated, for the first time, the suitability of on-farm green compost (GC) from the fourth range sector for the production, in a controlled environment, of six baby leaf species (radish, lettuce, rocket, chard, sorrel and dill), characterized by short cultivation cycles. The pH and electrical conductivity of potting soil-compost mixtures were affected by the different amounts of GC added to the potting soil. Germination tests on Lactuca sativa seeds indicated no phytotoxic effects when GC was used to prepare aqueous extracts diluted at 50% and 25% (v/v). In the pot experiment, GC was used at four different dosages in the growing medium, inducing different impacts on growth parameters, depending on the species and applied dose. The greatest plant growth responses were determined by using less than 3.5 g of GC in 100 g of potting soil. Significant positive correlations between the dry weights of root and shoot (r = 0.77 **), seedling height (r = 0.51 **) and the number of true leaves number (r = 0.56 **) confirmed the close relationship between the root system biomass and the growth parameters of aboveground organs. The study highlights that on-farm green compost, used as partial growing substrate, provides a good opportunity to obtain baby leaf species with well-developed root systems. Full article
(This article belongs to the Section Vegetable Production Systems)
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10 pages, 1073 KiB  
Article
Determination of Fosetyl-Aluminum in Wheat Flour with Extract-Dilute-Shoot Procedure and Hydrophilic Interaction Liquid Chromatography Tandem Mass Spectrometry
by Xianjiang Li, Sheng Wang, Zhen Guo, Xiuqin Li, Qinghe Zhang and Hongmei Li
Separations 2021, 8(11), 197; https://doi.org/10.3390/separations8110197 - 24 Oct 2021
Cited by 10 | Viewed by 3489
Abstract
Fosetyl-aluminum is a widely used ionic fungicide. This pesticide is not amenable to the common multi-residue sample preparation methods. Herein, this paper describes a novel method for the simple and sensitive determination of fosetyl-aluminum residue in wheat flour. The sample preparation method involved [...] Read more.
Fosetyl-aluminum is a widely used ionic fungicide. This pesticide is not amenable to the common multi-residue sample preparation methods. Herein, this paper describes a novel method for the simple and sensitive determination of fosetyl-aluminum residue in wheat flour. The sample preparation method involved extraction with water under ultrasonication and subsequent dilution with six-fold acetonitrile. The fosetyl-aluminum concentration was determined by hydrophilic interaction liquid chromatography tandem mass spectrometry. The limit of detection and quantification were only 5 and 10 ng/g, respectively, which meet the requirement of the current European legislation. Matrix-matched linearity (r2 = 0.9999) was established in the range of 10–2000 ng/g. Satisfactory recoveries were achieved in the range of 95.6% to 105.2% for three levels of spiked samples (10, 50, and 100 ng/g). Finally, the method was applied to analyzing 75 wheat flour samples produced in four provinces in China. Two samples were positive with concentrations over the limit of detection. This is the first method focusing on fosetyl-aluminum determination in wheat flour with an extract-dilute-shoot strategy and is very promising for the routine quality control of fosetyl-aluminum in similar cereal matrices. Full article
(This article belongs to the Special Issue Advances of Accurate Quantification Methods in Food Analysis)
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