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Keywords = cytochromes P450

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24 pages, 3165 KB  
Article
P450 Fusion Protein Expressed in E. coli for Regioselective Hydroxylation of Flavonoids
by Kinga Dulak, Agata Matera, Sandra Sordon, Maciej Wolak, Kinga Hyla, Ewa Huszcza and Jarosław Popłoński
Molecules 2026, 31(12), 2189; https://doi.org/10.3390/molecules31122189 (registering DOI) - 22 Jun 2026
Abstract
Plant cytochrome P450 monooxygenases (CYPs) are valuable biocatalysts for the regioselective hydroxylation of aromatic compounds. However, their expression in bacterial hosts is hampered by poor solubility, membrane anchoring and the requirement for redox partners. In this work, we report the design and characterization [...] Read more.
Plant cytochrome P450 monooxygenases (CYPs) are valuable biocatalysts for the regioselective hydroxylation of aromatic compounds. However, their expression in bacterial hosts is hampered by poor solubility, membrane anchoring and the requirement for redox partners. In this work, we report the design and characterization of modular expression systems that enable the functional production of SbCYP82D1.1 from Scutellaria baicalensis (SbF6H) in Escherichia coli. Both independent expression and synthetic fusion systems were evaluated by combining a CYP with a compatible reductase (ATR2_tr from Arabidopsis thaliana) to catalyze the conversion of chrysin into baicalein. A combinatorial library of N-terminal variants, host strains, media, and induction strategies was constructed and screened. Among the tested host, E. coli DH 10-beta provided the highest product titers, particularly when cultures were supplemented with 5-aminolevulinic acid. Truncation of the native transmembrane anchor significantly improved catalytic performance, whereas the addition of the heterologous MALLLAVF tag decreased activity. Fusion systems outperformed separate expression formats, showing approximately two-fold higher activity, with the flexible glycine–serine linker (L_GS) supporting the highest hydroxylation product formation. The corresponding fusion construct showed an apparent conversion of 0.1 mM chrysin to baicalein of up to 90% under the applied whole-cell reaction and analytical conditions, although this value should be interpreted with caution due to the concurrent instability of baicalein observed in all reactions and culture conditions. This result nevertheless indicates a marked improvement in whole-cell baicalein formation compared with previously reported bacterial systems. Together, these results demonstrate that rational N-terminal engineering combined with fusion protein design can enable efficient bacterial expression of plant CYPs, representing a promising step toward scalable production of hydroxylated flavonoids. Full article
(This article belongs to the Special Issue Biocatalytic Platforms Towards Synthesis and Degradation Processes)
22 pages, 1211 KB  
Article
CYP3A4, CYP3A5, and CYP4F2 Polymorphisms and Bleeding Risk in Ticagrelor-Based Dual Antiplatelet Therapy
by Sonja Dakić, Zoran Perišić, Svetlana Apostolović, Tomislav Kostić, Goran Koraćević, Tatjana Jevtović, Boris Đinđić, Nikola Stefanović, Danijela Đorđević-Radojković, Bojan Maričić, Dragana Stanojević, Maša Jović, Jelena Perišić and Tamara Filipović
Medicina 2026, 62(6), 1202; https://doi.org/10.3390/medicina62061202 (registering DOI) - 22 Jun 2026
Abstract
Background and Objectives: Ticagrelor reduces ischemic events in acute coronary syndrome (ACS) but increases bleeding risk. Clinical predictors of bleeding are well established; the contribution of cytochrome P450 polymorphisms involved in ticagrelor metabolism remains uncertain, with conflicting reports in the literature. We [...] Read more.
Background and Objectives: Ticagrelor reduces ischemic events in acute coronary syndrome (ACS) but increases bleeding risk. Clinical predictors of bleeding are well established; the contribution of cytochrome P450 polymorphisms involved in ticagrelor metabolism remains uncertain, with conflicting reports in the literature. We examined the association of CYP3A4* 22 (rs 35599367), CYP3A5* 3 (rs 776746), and CYP4F2 (rs3093135) with bleeding in a Serbian ACS cohort. Materials and Methods: This prospective, single- center observational study enrolled 105 consecutive ACS patients undergoing percutaneous coronary intervention (PCI) or medical management after coronary angiography and receiving dual antiplatelet therapy (DAPT) with acetylsalicylic acid and ticagrelor at the University Clinical Center Niš between January 2024 and the end of May 2025. Bleeding events occurring during the index hospitalization and the six-month follow-up were classified according to the Bleeding Academic Research Consortium (BARC) criteria. Genotyping used TaqMan assays. Associations with bleeding were assessed using Firth’s penalized logistic regression, with multivariable adjustment for age and renal function. Severity-stratified analyses and gradient-boosted machine learning (XGBoost with SHAP) were performed as exploratory analyses. Results: Thirteen patients (12.4%) experienced bleeding (nine minor [BARC 1/2], four major [BARC 3/5]). Age ≥ 75 years (univariable OR 7.62, p = 0.001) and eGFR < 60 mL/min/1. 73 m 2 (OR 3.68, p = 0.006) were the strongest predictors. CYP3A5 *1 carrier status was univariably associated with bleeding (OR 4.16, p = 0.043) but did not remain significant after adjustment for age and renal function, and *1 carriers were significantly older and more likely to have impaired renal function. No genotype was associated with major (BARC 3/5) bleeding. The apparent effect was concentrated in minor bleeding (BARC 1/2 rate: 30.8% versus 5.5%), with no major events among *1 carriers. CYP 3 A 4* 22 (OR 1.37, p = 0.109) and CYP 4 F 2 (OR 1.17, p = 0.111) showed no association. Machine-learning analyses confirmed eGFR and age as the dominant predictors. Conclusions: In this Serbian ACS cohort, clinical factors—particularly advanced age and impaired renal function—dominated the prediction of bleeding risk. The CYP3A5 signal was largely explained by baseline imbalances in age and renal function. CYP 3 A 4* 22 and CYP 4 F 2 polymorphisms did not contribute additional predictive information. Preemptive genotyping for these variants is unlikely to materially improve bleeding-risk assessment beyond standard clinical evaluation in patients of this type. Full article
(This article belongs to the Special Issue Advances in Acute Myocardial Infarction)
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18 pages, 1132 KB  
Article
Apiol-Rich and Caryophyllene-Oxygenated Essential Oils from Amazonian Piper Species as Dual-Action Biopesticides: Broad-Spectrum and Selective Antifeedant
by Liliana Ruiz-Vásquez, Maria Fe Andrés Yeves, Mao Deng Jesulin Vela Mendoza, Lastenia Ruiz Mesia, Wilfredo Ruiz Mesia, Hivelli Ricopa Cotrina, Daniel Tapia, Félix Valcarcel and Azucena Gonzalez-Coloma
Molecules 2026, 31(12), 2177; https://doi.org/10.3390/molecules31122177 (registering DOI) - 22 Jun 2026
Abstract
The increasing resistance of agricultural pests and disease-vectoring arthropods to synthetic pesticides underscores the urgent need for novel and sustainable biocidal agents. This study evaluates, for the first time, the insect antifeedant and ixodicidal activities of essential oils derived from ten Amazonian Piper [...] Read more.
The increasing resistance of agricultural pests and disease-vectoring arthropods to synthetic pesticides underscores the urgent need for novel and sustainable biocidal agents. This study evaluates, for the first time, the insect antifeedant and ixodicidal activities of essential oils derived from ten Amazonian Piper species and their major constituents. Antifeedant effects were assessed against Spodoptera littoralis, Myzus persicae, and Rhopalosiphum padi, whereas ixodicidal activity was tested on Hyalomma lusitanicum. Additionally, the effects of these oils on the plant-parasitic nematode Meloidogyne javanica were investigated. Essential oils from Piper mituense (51.6% apiol) and P. sancti-felicis (76.1% apiol) exhibited the highest bioactivity, achieving more than 75% feeding inhibition across all insect species and 100% tick mortality. P. mituense consistently demonstrated greater potency, suggesting possible synergistic interactions among its minor constituents. Principal component analysis linked apiol-rich chemotypes with broad-spectrum activity. In contrast, oils rich in oxygenated caryophyllene derivatives, particularly those from P. casapiense, showed strong selective antifeedant effects against R. padi. Pure apiol displayed activity across all assays, whereas no nematicidal effects were observed. Molecular docking analyses supported these findings, indicating that apiol can interact with acetylcholinesterase in addition to its known effect on cytochrome P450 targets. Overall, these results identify complementary Piper chemotypes with promising potential as dual-purpose biopesticides for integrated pest management strategies. Full article
(This article belongs to the Special Issue Chemical Composition and Bioactivities of Essential Oils, 3rd Edition)
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17 pages, 2322 KB  
Article
Polypharmacy and Drug Interaction Risk in Children and Adolescents with Congenital Heart Defects: Insights from a Nationwide Survey
by Kim Sarah Fritz, Paul C. Helm, Dominik Tobias, Janina Semmler, Jannos Siaplaouras, Christian Apitz and Constanze Pfitzer
J. Clin. Med. 2026, 15(12), 4802; https://doi.org/10.3390/jcm15124802 (registering DOI) - 20 Jun 2026
Abstract
Background: Congenital heart defects (CHD) are the most common congenital malformations and often require complex, lifelong pharmacotherapy. In pediatric CHD populations, multidrug regimens targeting cardiac function and comorbidities predispose patients to polypharmacy. At the molecular level, concomitant drug use increases the risk [...] Read more.
Background: Congenital heart defects (CHD) are the most common congenital malformations and often require complex, lifelong pharmacotherapy. In pediatric CHD populations, multidrug regimens targeting cardiac function and comorbidities predispose patients to polypharmacy. At the molecular level, concomitant drug use increases the risk of pharmacokinetic and pharmacodynamic interactions. Methods: This study aimed to characterize medication patterns and assess polypharmacy and potential drug–drug interactions in patients with CHD. A cross-sectional online survey was conducted in collaboration with the German National Register for Congenital Heart Defects (NRCHD) between November and December 2021. Patients aged 6–17 years with CHD were eligible for inclusion. Participants reported their current medications in open-ended questions. Drugs were categorized into pharmacological classes, and common drug combinations were evaluated for potential interactions. Results: Of 894 participants included in the analysis, 372 reported current medication use. Among these, 179 (48.1%) met criteria for polypharmacy (≥2 drugs). Polypharmacy was more frequent in patients with higher disease severity and comorbidity burden. Several drug combinations showed potential for clinically relevant pharmacokinetic and pharmacodynamic interactions, including mechanisms involving renal electrolyte handling, altered protein binding, cytochrome P450-mediated metabolism, and additive pharmacodynamic effects. Conclusions: Children with CHD are exposed to complex multidrug regimens with a considerable interaction risk, underscoring the need for systematic medication review and mechanistically informed pharmacological management in pediatric CHD care. Full article
(This article belongs to the Section Cardiology)
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21 pages, 8004 KB  
Article
Comparative Transcriptomic Analysis of Detoxification Enzyme Gene Families in Parent and Offspring Riptortus pedestris After Sublethal Thiamethoxam Treatment
by Sizhu Zhao, Zijie Wang, Simeng Chen, Ruirui Li, Zhengxiao Du, Xing Huang, Haibin Yuan, Shusen Shi, Yuxin Zhou and Yu Gao
Insects 2026, 17(6), 648; https://doi.org/10.3390/insects17060648 (registering DOI) - 19 Jun 2026
Viewed by 147
Abstract
Thiamethoxam is the main neonicotinoid insecticide used for controlling Riptortus pedestris (Fabricius) (Hemiptera: Alydidae). However, sublethal concentration stress may induce intergenerational transcriptional memory, leading to transcriptional patterns that may contribute to the intergenerational accumulation of metabolic tolerance, and evaluating only the toxicity of [...] Read more.
Thiamethoxam is the main neonicotinoid insecticide used for controlling Riptortus pedestris (Fabricius) (Hemiptera: Alydidae). However, sublethal concentration stress may induce intergenerational transcriptional memory, leading to transcriptional patterns that may contribute to the intergenerational accumulation of metabolic tolerance, and evaluating only the toxicity of the current generation would underestimate the long-term risk. Therefore, this study investigated the effect of parental exposure on the expression of detoxification enzyme genes in offspring. Using transcriptome sequencing, we systematically identified three detoxification enzyme gene families (cytochrome P450 monooxygenases (CYPs), carboxylesterases (CCEs), and glutathione S-transferases (GSTs)) in R. pedestris and compared their differential expression patterns between the parental and filial generations after thiamethoxam treatment at three sublethal concentrations (LC10, LC30, and LC50). In the parental generation, a Theta family GST was consistently upregulated, while in the filial generation, detoxification genes were predominantly downregulated, and the genes upregulated in the parents were not also upregulated in the offspring. Comparisons of parents and offspring at the same concentration revealed that the medium concentration induced the highest number of intergenerationally upregulated genes, exhibiting a non-linear response pattern. These results indicate that parental exposure to sublethal thiamethoxam leaves an intergenerational transcriptional imprint in the offspring, and the transmission pattern involves transcriptional reprogramming rather than simple replication of the parental response, the mechanism of which remains to be determined. This study provides transcriptomic evidence for understanding the metabolic adaptation and intergenerational resistance evolution of R. pedestris to thiamethoxam, offering important reference value for field resistance monitoring and rational insecticide application. Full article
(This article belongs to the Special Issue Advances in the Effects of Insecticides on Pests)
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2 pages, 179 KB  
Abstract
Thermal Modulation of Cytochrome P450 1A Immunostaining in Single and Mixture PAH-Exposed Brown Trout Hepatocytes
by Rodrigo Alves, Célia Lopes, Rosária Seabra, Sofia Esquível, Maria J. Rocha, Eduardo Rocha and Tânia Vieira Madureira
Proceedings 2026, 146(1), 63; https://doi.org/10.3390/proceedings2026146063 (registering DOI) - 18 Jun 2026
Viewed by 47
Abstract
Introduction: Temperature is a key environmental factor influencing the physiological and biochemical processes of aquatic organisms, including xenobiotic metabolism. Understanding how temperature modulates the toxicological effects of pollutants such as polycyclic aromatic hydrocarbons (PAHs) is crucial in the context of climate change. [...] Read more.
Introduction: Temperature is a key environmental factor influencing the physiological and biochemical processes of aquatic organisms, including xenobiotic metabolism. Understanding how temperature modulates the toxicological effects of pollutants such as polycyclic aromatic hydrocarbons (PAHs) is crucial in the context of climate change. Among these compounds, benzo[a]pyrene (BaP) and benzo[a]anthracene (BaA) are priority pollutants in aquatic environments, resulting from incomplete combustion. Their relevance is attributed to persistence and metabolic bioactivation potential. Fish primary hepatocyte cultures represent a relevant in vitro model for studying combined effects of thermal stress and chemical exposures, while supporting the 3Rs principles (Replacement, Reduction, and Refinement). Objective: This study aims to assess temperature-dependent effects of BaP and BaA, and their mixtures in brown trout hepatocytes using cytochrome P450 1A (CYP1A) immunohistochemistry as an indicator of xenobiotic metabolism. Methodology: Primary hepatocytes were isolated using a two-step collagenase perfusion method and cultured in 24-well plates at 18 °C and 22 °C. Cells were exposed for 72 h to supplemented L-15 medium (control) or to 0.1% dimethyl sulfoxide in supplemented L-15 medium (solvent control), as well as to single exposures of 1 and 10 µM of BaP and BaA and to equimolar mixtures of both compounds (1 and 10 µM). Viability was assessed using the lactate dehydrogenase (LDH) assay. CYP1A immunostaining was quantified based on cytoplasmic staining intensity relative to background area. Results: No significant effects on cell viability were observed under any condition. Temperature significantly reduced CYP1A expression in single exposures at 22 °C compared to 18 °C. BaP induced a significant dose-dependent increase, while BaA differed from controls only at 10 µM. In mixtures, only treatment- and dose-dependent effects were observed, with no temperature influence detected. Conclusions: Overall, the data highlight temperature as a key modulator of biochemical responses to PAHs, with single and mixed exposures eliciting distinct effects and suggesting potential synergism in mixtures. Full article
2 pages, 176 KB  
Abstract
Effects of Temperature Increase and Benzo[k]fluoranthene on Viability and CYP1A Response in Brown Trout Hepatocytes
by Margarida Vilaça, Rosária Seabra, Maria João Rocha, Eduardo Rocha and Célia Lopes
Proceedings 2026, 146(1), 65; https://doi.org/10.3390/proceedings2026146065 (registering DOI) - 18 Jun 2026
Viewed by 37
Abstract
Introduction: The temperature of rivers in the Iberian Peninsula has increased due to global warming. In addition, these rivers are polluted by contaminants of emerging concern, such as polycyclic aromatic hydrocarbons (PAHs). Higher temperatures and pollution concurrently impose threats to the Iberian [...] Read more.
Introduction: The temperature of rivers in the Iberian Peninsula has increased due to global warming. In addition, these rivers are polluted by contaminants of emerging concern, such as polycyclic aromatic hydrocarbons (PAHs). Higher temperatures and pollution concurrently impose threats to the Iberian Peninsula’s endemic species, including the brown trout (Salmo trutta), a cold-water species widely used in ecotoxicological studies. Because the liver is the main biotransformation organ, and is particularly sensitive to both chemical and temperature changes, in vitro liver models may represent valuable alternatives for assessing combined stressor effects, complying with the 3Rs principle. Objective: In line with the above, the present study aimed to evaluate the combined effects of a 4 °C temperature increase and the model PAH benzo[k]fluoranthene (B[k]F) on fish liver cells using a primary brown trout hepatocyte culture as a model. Methodology: Primary hepatocytes were seeded in 6-well plates at a density of 1.0 × 106 cells/mL and exposed for 48 h to 1, 10, and 20 µM B[k]F at 18 °C (normothermia) and 22 °C (warming scenario). Cell viability was assessed using trypan blue, alamarBlue, and lactate dehydrogenase (LDH) assays. Cytochrome P450 (CYP)1A was evaluated in terms of its gene expression by RT-qPCR and its protein expression through immunocytochemistry (ICC). The immunostaining was quantified using a score system which considered five intensity staining levels. Results: Exposure to B[k]F and to the higher temperature increased LDH leakage without interaction effects. In contrast, the other viability assays did not show significant differences across conditions. Regarding CYP1A, both gene and protein expression increased with all B[k]F concentrations in relation to the controls, but were not influenced by temperature. Notably, the lowest B[k]F concentration (1 µM) elicited the highest CYP1A gene expression, suggesting a non-monotonic response. Conclusions: Overall, the model was responsive to both temperature (4 °C) increase and to B[k]F, validating its usefulness for assessing liver pollutant effects in the context of global warming. These findings support the application of fish primary hepatocyte models as relevant tools in ecotoxicology under environmentally realistic multi-stressor scenarios. Full article
14 pages, 5124 KB  
Article
Identification and Characterization of the Detoxification Genes from the Transcriptome of Plagiodera versicolora
by Xiao-Long Liu, Hai-Dong Sun, Yi-Wen Pei, Min Lu and Hai-Nan Zhang
Insects 2026, 17(6), 643; https://doi.org/10.3390/insects17060643 - 18 Jun 2026
Viewed by 174
Abstract
Plagiodera versicolora (Coleoptera: Chrysomelidae), the willow leaf beetle, is a leaf-eating pest that generally occurs on salicaceous trees. However, there is a blank of identification and phylogenetic relationship of the detoxification genes in P. versicolora. Here, we identified four detoxification gene families [...] Read more.
Plagiodera versicolora (Coleoptera: Chrysomelidae), the willow leaf beetle, is a leaf-eating pest that generally occurs on salicaceous trees. However, there is a blank of identification and phylogenetic relationship of the detoxification genes in P. versicolora. Here, we identified four detoxification gene families (glutathione S-transferases: GSTs, UDP-glycosyltransferases: UGTs, cytochrome P450 monooxygenases: CYPs and carboxylesterases: COEs) from the adult antennal transcriptome data. In all, 146 candidate detoxification genes including 22 GSTs, 20 UGTs, 60 CYPs, and 44 COEs were identified. We used quantitative real-time PCR technology to explore the tissue expression patterns of 12 PvGSTs in P. versicolora. The results showed that 7 PvGSTs have significantly high expression in antennae, indicating these PvGSTs may play an important role in degrade and/or inactivate the sex pheromones and host volatiles. The identification and phylogenetics of the detoxification genes in P. versicolora extended the database in Coleoptera and contributed to the subsequent in-depth research for function about detoxification genes. Full article
(This article belongs to the Special Issue Insect Transcriptomics)
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19 pages, 3318 KB  
Article
Metformin Enhances 2-Aminoethyl Dihydrogen Phosphate-Induced Mitochondrial Dysfunction and Apoptosis in Melanoma Cells
by Thalles Anthony Duarte de Oliveira, Gustavo Henrique Doná Rodrigues Almeida, Sergio Mestieri Chammas, Rosa Andrea Nogueira Laiso, Yasmim Emilly Moreira Sousa, Ícaro Gabriel Teles Pacheco de Matos, Valherya Silva Rodriguez, Beatriz Cristine Bittencourt Queiroz, Ariane Clemente Alves Oliveira, Sara de Lima, Laís Araujo Martins de Arruda, Daniel da Conceição Rabelo, Rose Eli Grassi Rici, Paulo Cézar de Freitas Mathias and Durvanei Augusto Maria
Int. J. Mol. Sci. 2026, 27(12), 5493; https://doi.org/10.3390/ijms27125493 - 18 Jun 2026
Viewed by 141
Abstract
Melanoma exhibits pronounced metabolic plasticity and mitochondrial dependency, contributing to therapeutic resistance and tumor progression. Targeting mitochondrial function therefore represents a promising anticancer strategy. 2-Aminoethyl dihydrogen phosphate (2-AEH2P), a bioactive phosphomonoester, has demonstrated antiproliferative potential, while metformin, a clinically established antidiabetic [...] Read more.
Melanoma exhibits pronounced metabolic plasticity and mitochondrial dependency, contributing to therapeutic resistance and tumor progression. Targeting mitochondrial function therefore represents a promising anticancer strategy. 2-Aminoethyl dihydrogen phosphate (2-AEH2P), a bioactive phosphomonoester, has demonstrated antiproliferative potential, while metformin, a clinically established antidiabetic drug, acts as a mitochondrial complex I inhibitor and metabolic modulator. This study investigated the cytotoxic and mechanistic effects of 2-AEH2P and metformin hydrochloride, individually and in combination, in human (SK-MEL-28) and murine (B16-F10) melanoma models, using non-tumorigenic fibroblasts (FN1 and L929) as controls. Cell viability, proliferation dynamics, cell-cycle distribution, mitochondrial membrane potential (ΔΨm), and apoptosis-associated markers were evaluated by flow cytometry. 2-AEH2P reduced melanoma cell viability and proliferation while inducing G2/M accumulation, DNA fragmentation, mitochondrial depolarization, increased cytochrome c release, caspase-3 and caspase-8 activation, upregulation of p53 and Bad, and downregulation of Bcl-2. Metformin alone exerted moderate cytotoxic and pro-apoptotic effects. Notably, combined treatment markedly potentiated mitochondrial depolarization and intrinsic apoptotic signaling in melanoma cells, significantly lowering IC50 values and enhancing caspase activation and cytochrome c release. Bliss independence analysis demonstrated synergistic interaction in SK-MEL-28 and B16-F10 cells. Although interaction scores indicated synergy in one fibroblast model, absolute cytotoxicity remained lower than in melanoma cells. These findings demonstrate that metabolic co-targeting with metformin enhances mitochondrial dysfunction-associated apoptotic signaling in melanoma cells, supporting a drug repositioning strategy aimed at exploiting mitochondrial vulnerability in metabolically adaptable tumors. Full article
(This article belongs to the Section Molecular Pharmacology)
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23 pages, 4659 KB  
Article
Insights into the Cytochrome P450 Monooxygenase Superfamily in Kadsura heteroclita (Xuetong)
by Qian Xiao, Tianhao Fu, Mao Li, Ziyi Cai, Jiahui Yi, Jiaqi Liu, Mengqin Luo, Zhenni Xie, Chensi Tan, Jiang Zeng, Wei Wang and Luyun Ning
Molecules 2026, 31(12), 2140; https://doi.org/10.3390/molecules31122140 - 17 Jun 2026
Viewed by 209
Abstract
Kadsura heteroclita (Roxb.) Craib, commonly known as “Xuetong”, is a traditional Tujia ethnomedicine with anti-rheumatoid arthritis (RA) activity, and schizanlactone E (Xuetongsu) is its major bioactive component whose biosynthetic pathway remains uncharacterized. As a cycloartane-type tetracyclic triterpenoid, Xuetongsu’s biosynthesis is likely to involve [...] Read more.
Kadsura heteroclita (Roxb.) Craib, commonly known as “Xuetong”, is a traditional Tujia ethnomedicine with anti-rheumatoid arthritis (RA) activity, and schizanlactone E (Xuetongsu) is its major bioactive component whose biosynthetic pathway remains uncharacterized. As a cycloartane-type tetracyclic triterpenoid, Xuetongsu’s biosynthesis is likely to involve multiple oxidation steps. Cytochrome P450 (CYP450) is a versatile monooxygenase encoded by a large and diverse gene superfamily and plays a critical role in various oxidation reactions in plants’ secondary metabolism. In this study, 367 KhCYP450s were identified and systematically analyzed for their physicochemical properties, phylogenetic analysis, conserved motifs, gene structures, collinearity, and cis-acting elements. Weighted gene co-expression network analysis (WGCNA) revealed a turquoise module strongly associated with Xuetong root tissue, which had the highest Xuetongsu accumulation; 32 candidate KhCYP450s within this module were screened via correlation analysis between gene expression and xuetongsu content and partially validated by qRT-PCR. Five of these candidates showed significant homology with known triterpenoid biosynthetic genes via protein structure analyses. This study deepened our comprehension of the CYP450 superfamily in Xuetong and provided a valuable reference for further research on the biosynthesis of Xuetongsu. Full article
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20 pages, 3473 KB  
Systematic Review
Enzyme Inhibition by Bioactive Compounds from Olive (Olea europaea L.) and Pomegranate (Punica granatum L.): Systematic Review of In Vitro Studies
by Robert Vučina, Doris Drmač, Valentina Rezić, Dušan Čulum and Martin Kondža
Molecules 2026, 31(12), 2134; https://doi.org/10.3390/molecules31122134 - 17 Jun 2026
Viewed by 192
Abstract
Compounds from olive (Olea europaea L.) and pomegranate (Punica granatum L.) have many beneficial effects on human health. This review paper considers the inhibitory potential, under in vitro conditions, of bioactive components of olive and pomegranate on different enzyme systems. Research shows [...] Read more.
Compounds from olive (Olea europaea L.) and pomegranate (Punica granatum L.) have many beneficial effects on human health. This review paper considers the inhibitory potential, under in vitro conditions, of bioactive components of olive and pomegranate on different enzyme systems. Research shows that olive polyphenols (oleuropein, hydroxytyrosol, luteolin, and oleocanthal), as well as pomegranate polyphenols (punicalagin, urolithin A, ellagic acid), inhibit cyclooxygenase and lipoxygenase enzymes, which are associated with inflammatory processes. They also show an inhibitory effect on acetylcholinesterase, butyrylcholinesterase, and β-secretase, which opens up the possibility of a strong neuroprotective effect. Olive and pomegranate polyphenols also have an inhibitory effect on enzymes involved in carbohydrate metabolism, such as amylase and glucosidase, and can help fight diabetes and regulate human metabolism. In addition, polyphenols and extracts of both plants showed an inhibitory effect on cytochrome P450 enzymes, which metabolize most drugs. These data open up the possibility of interactions with certain groups of drugs. The current evidence supports the view that olive and pomegranate polyphenols act as biologically versatile compounds with considerable pharmaceutical and nutraceutical potential. Future investigations integrating enzymology, metabolomics, molecular docking, and clinical validation will be essential for translating these promising in vitro findings into evidence-based therapeutic applications. Full article
(This article belongs to the Special Issue Plant Phenolics: Extraction, Profiling, Properties and Applications)
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2 pages, 174 KB  
Abstract
Effects of Collagen Supplementation on Viability, Morphology, and CYP1A Expression in Spheroids from the Rainbow Trout Liver Cell Line RTL-W1
by Telma Esteves, Fernanda Malhão, Célia Lopes and Eduardo Rocha
Proceedings 2026, 146(1), 14; https://doi.org/10.3390/proceedings2026146014 - 16 Jun 2026
Viewed by 37
Abstract
Introduction: The 3 Rs principle advocates developing alternative, biologically relevant models. Thus, 3D fish liver in vitro models have been increasingly used for ecotoxicological studies. We previously optimized spheroids from the rainbow trout non-tumoral liver cell line RTL-W1 and employed them to [...] Read more.
Introduction: The 3 Rs principle advocates developing alternative, biologically relevant models. Thus, 3D fish liver in vitro models have been increasingly used for ecotoxicological studies. We previously optimized spheroids from the rainbow trout non-tumoral liver cell line RTL-W1 and employed them to assess the effects of aquatic pollutants. Although they demonstrated potential for assessing ecotoxicological effects, further optimization is warranted to enhance their physiological relevance. Incorporating an extracellular matrix (ECM), such as collagen, has been shown to be a promising strategy to improve spheroids’ structural organization and functionality. Objective: This study aimed to optimize 3D culturing conditions of RTL-W1 spheroids by evaluating the effects of collagen supplementation on viability, morphology, and functional response. Methodology: Spheroids from the RTL-W1 cell line (60,000 cells per well) were cultured in 96-well ultra-low attachment (ULA) plates at 18 °C. After spheroids’ formation, rat tail collagen was supplemented at concentrations of 15 (C15), 30 (C30), and 60 (C60) µg/mL at culture days 7, 8, and 9. Spheroids were collected at two sampling days (10 and 14). Viability was assessed using alamarBlue and lactate dehydrogenase (LDH) assays, while morphology was assessed by optical microscopy. Collagen penetration was evaluated using Masson’s trichrome staining technique. Protein expression of cytochrome P450(CYP)1A was assessed by quantifying immunocytochemistry staining using an anti-CYP1A antibody. Results: On day 10, LDH leakage decreased in C15 and C60, compared with the control, whilst C15 spheroids showed lower absorbance levels in the alamarBlue assay. On day 14, LDH showed no significant differences; however, C30 and C60 had higher alamarBlue absorbance, indicating greater metabolic capacity. Spheroid morphology appeared intact in all conditions. Masson trichrome revealed collagen fibrils at the periphery of the spheroids, especially in C30 and C60, indicating that spheroids incorporated collagen. CYP1A immunostain was present in all conditions, localized in the spheroids’ border, and tended to be higher when supplementation occurred in earlier days. Conclusions: Our results suggest that RTL-W1 spheroids interacted with the collagen matrix and appeared to functionally improve. Data suggest that incorporating ECM may increase the complexity and physiological relevance of RTL-W1 spheroids, thereby better supporting mechanistic and ecotoxicological applications. Full article
16 pages, 2768 KB  
Article
Potential Inhibitory Effect of LED-Sourced Red Light Therapy on Ocular Growth in Normal and Myopic Chicks
by Fengjuan Yu, Kit-Ying Choy, Jingfang Bian, Samantha Sze-Wan Shan, Chi-Ho To, King-Kit Li, Jie Lin, Jingsong Huang, Bo Wang, Dennis Yan-Yin Tse, Rachel Ka-Man Chun and Thomas Chuen Lam
Int. J. Mol. Sci. 2026, 27(12), 5427; https://doi.org/10.3390/ijms27125427 - 16 Jun 2026
Viewed by 100
Abstract
Repeated low-level red light (RLRL) has been reported to control myopia progression clinically. Given safety concerns with laser sources, light-emitting diodes (LED)-sourced red light represents a promising alternative. This study investigated the effects of LED-sourced red light (RL) on cellular response in vitro [...] Read more.
Repeated low-level red light (RLRL) has been reported to control myopia progression clinically. Given safety concerns with laser sources, light-emitting diodes (LED)-sourced red light represents a promising alternative. This study investigated the effects of LED-sourced red light (RL) on cellular response in vitro and ocular growth in normal and lens-induced myopic chicks. In vitro, the mouse photoreceptor 661W cell line was exposed to 625 and 664 nm LED-sourced RL (3 min, twice daily) for 3 days, and cytochrome c oxidase (CCO) activity and cell viability were assessed. In vivo, chicks were randomly assigned to normal visual conditions or monocular −5D lens-induced myopia (LIM). Treatment groups received 664 nm LED-sourced RL (30 min, twice daily) at low, moderate, or high intensities for 10 days. In vitro, LED-sourced RL at 664 nm more effectively activated CCO and enhanced cell viability in 661W cells than RL at 625 nm and white light. In vivo, low-intensity RL exposure of 10 days significantly inhibited vitreous chamber depth (VCD) and axial length (AL) elongation compared to the normal light group (p < 0.05) in normally growing chicks but showed no significant effect in LIM eyes. By contrast, moderate- and high-intensity RL exposure for 10 days attenuated myopia progression in LIM eyes, as reflected by slower VCD and AL elongation and less myopic shift, compared to the normal light group (all p < 0.05). Notably, high-intensity RL also protected the untouched fellow eyes of the LIM chick models against myopic shift and excessive elongation. LED-sourced RL at 664 nm was effective in activating CCO, reducing apoptosis, and promoting cell viability. In chick models, it can also inhibit ocular growth in both normally growing and −5D lens-induced myopic chicks. Full article
(This article belongs to the Section Molecular Biology)
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13 pages, 8979 KB  
Brief Report
Effects of Elevated Oxytetracycline on Cytochrome P450 and Immune-Related Gene Expression and Histopathological Alterations in Olive Flounder, Paralichthys olivaceus
by Hyeon Ju Na, Gi Baeg Lee, Hee Jeong Kong, Ju-Won Kim and Seong Don Hwang
Animals 2026, 16(12), 1853; https://doi.org/10.3390/ani16121853 - 16 Jun 2026
Viewed by 193
Abstract
Oxytetracycline (OTC) is widely used in aquaculture to treat bacterial diseases, but its effects on drug metabolism and immune responses remain poorly understood in olive flounder (Paralichthys olivaceus). This study investigated the effects of OTC immersion for 1 h at different [...] Read more.
Oxytetracycline (OTC) is widely used in aquaculture to treat bacterial diseases, but its effects on drug metabolism and immune responses remain poorly understood in olive flounder (Paralichthys olivaceus). This study investigated the effects of OTC immersion for 1 h at different concentrations on the expression profile of drug metabolism- and immune-related genes and the histopathological changes in the gills and liver of olive flounder. The expression of Paralichthys olivaceus cytochrome P450 (PoCYP), Paralichthys olivaceus diphosphate (UDP)-glucuronosyltransferases (PoUGTs), and immune-related genes significantly increased at 12 and 24 h and then decreased at 72 h in the 100 and 200 ppm groups. By contrast, the 400 ppm group exhibited variable expression patterns depending on the gene and tissue. The highest expression levels were observed for PoIL-1β in the gills (22.7-fold) and PoCYP27B1 in the liver (58.0-fold) in the 400 ppm group. Histopathological analysis revealed macrophage activation in the liver at 72 h in the 200 ppm group, whereas epithelial edema and mild aneurysmal changes in the gills and macrophage activation in the liver were observed in the 400 ppm group. These findings provide insights into the effects of OTC exposure on drug metabolism and immune responses in olive flounder. Full article
(This article belongs to the Section Aquatic Animals)
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17 pages, 5947 KB  
Review
MicroRNA-Mediated Post-Transcriptional Regulation of Cytochrome P450s
by Qi-Hang Yu, Sohaib Shahid, Jia-Yi Wu, Lin-Yan Zhao, Fen Li and Shao-Ying Wu
Genes 2026, 17(6), 698; https://doi.org/10.3390/genes17060698 - 16 Jun 2026
Viewed by 199
Abstract
The rapid evolution of metabolic resistance to chemical insecticides and the adaptation to plant allelochemicals in insect pests have become major challenges in global pest management. While the overexpression of cytochrome P450 monooxygenases (P450s) is a well-recognized classic detoxification mechanism, the upstream epigenetic [...] Read more.
The rapid evolution of metabolic resistance to chemical insecticides and the adaptation to plant allelochemicals in insect pests have become major challenges in global pest management. While the overexpression of cytochrome P450 monooxygenases (P450s) is a well-recognized classic detoxification mechanism, the upstream epigenetic and post-transcriptional regulatory networks governing this process have only recently been elucidated. In this narrative review, the latest research progress on microRNAs (miRNAs) as crucial “fine-tuners” in insect detoxification networks is systematically summarized. The classic regulatory model is highlighted: the induced or constitutive downregulation of specific miRNAs relieves the translational repression of their target P450 genes, thereby contributing to metabolic resistance to major insecticide classes, including neonicotinoids, diamides, and pro-insecticides. Furthermore, the evolutionary recruitment mechanisms of conserved miRNAs in host plant adaptation are explored, and how endocrine signals, such as juvenile hormone (JH) and 20-hydroxyecdysone (20E), synergistically regulate the miRNA–P450 axis is analyzed. The “sponge effect”, wherein highly expressed P450 mRNAs act as competitive endogenous RNAs (ceRNAs) to sequester miRNAs, and the consequent physiological trade-offs (fitness costs) resulting from the prioritization of metabolic resources toward the detoxification system are comprehensively discussed. Finally, the current core methodologies for miRNA functional validation are critically evaluated, and the application potential and ecological safety prerequisites of miRNA-based nanobiopesticides for targeted and sustainable pest management are discussed. By integrating mechanistic insights with translational perspectives, this review highlights miRNA–P450 regulatory networks as key determinants of insecticide resistance evolution and as promising targets for developing more precise, environmentally compatible pest-management strategies. Full article
(This article belongs to the Special Issue Genetic and Molecular Mechanisms of Insect Resistance)
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