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Keywords = automatic tree reconstruction

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18 pages, 4759 KB  
Article
Daily Peak Load Prediction Method Based on XGBoost and MLR
by Bin Cao, Yahui Chen, Sile Hu, Yu Guo, Xianglong Liu, Yuan Wang, Xiaolei Cheng, Qian Zhang and Jiaqiang Yang
Appl. Sci. 2025, 15(20), 11180; https://doi.org/10.3390/app152011180 - 18 Oct 2025
Viewed by 301
Abstract
During the peak load period, there is a high level of imbalance between power supply and demand, which has become a critical challenge, leading to higher operational costs for power grids. To improve the accuracy of peak load forecasting, this study introduces a [...] Read more.
During the peak load period, there is a high level of imbalance between power supply and demand, which has become a critical challenge, leading to higher operational costs for power grids. To improve the accuracy of peak load forecasting, this study introduces a novel approach based on Extreme Gradient Boosting Trees (XGBoost) and Multiple Linear Regression (MLR) for daily peak load prediction. The proposed methodology first employs an improved version of the Complete Ensemble Empirical Mode Decomposition with Adaptive Noise (ICEEMDAN) algorithm to decompose the raw load data, subsequently reconstructing each Intrinsic Mode Function (IMF) into high-frequency and stationary components. For the high-frequency components, XGBoost serves as the base predictor within a Bagging-based ensemble structure, while the Sparrow Search Algorithm (SSA) is employed to optimize hyperparameters automatically, ensuring efficient learning and accurate representation of complex peak load fluctuations. Meanwhile, the stationary components are modeled using MLR to provide fast and reliable estimations. The proposed framework was evaluated using actual daily peak load data from Western Inner Mongolia, China. The results indicate that the proposed method successfully captures the peak characteristics of the power grid, delivering both robust and precise predictions. When compared to the baseline model, the RMSE and MAPE are reduced by 54.4% and 87.3%, respectively, underscoring its significant potential for practical applications in power system operation and planning. Full article
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23 pages, 15968 KB  
Article
YOLOv8n-RMB: UAV Imagery Rubber Milk Bowl Detection Model for Autonomous Robots’ Natural Latex Harvest
by Yunfan Wang, Lin Yang, Pengze Zhong, Xin Yang, Chuanchuan Su, Yi Zhang and Aamir Hussain
Agriculture 2025, 15(19), 2075; https://doi.org/10.3390/agriculture15192075 - 3 Oct 2025
Viewed by 544
Abstract
Natural latex harvest is pushing the boundaries of unmanned agricultural production in rubber milk collection via integrated robots in hilly and mountainous regions, such as the fixed and mobile tapping robots widely deployed in forests. As there are bad working conditions and complex [...] Read more.
Natural latex harvest is pushing the boundaries of unmanned agricultural production in rubber milk collection via integrated robots in hilly and mountainous regions, such as the fixed and mobile tapping robots widely deployed in forests. As there are bad working conditions and complex natural environments surrounding rubber trees, the real-time and precision assessment of rubber milk yield status has emerged as a key requirement for improving the efficiency and autonomous management of these kinds of large-scale automatic tapping robots. However, traditional manual rubber milk yield status detection methods are limited in their ability to operate effectively under conditions involving complex terrain, dense forest backgrounds, irregular surface geometries of rubber milk, and the frequent occlusion of rubber milk bowls (RMBs) by vegetation. To address this issue, this study presents an unmanned aerial vehicle (UAV) imagery rubber milk yield state detection method, termed YOLOv8n-RMB, in unstructured field environments instead of manual watching. The proposed method improved the original YOLOv8n by integrating structural enhancements across the backbone, neck, and head components of the network. First, a receptive field attention convolution (RFACONV) module is embedded within the backbone to improve the model’s ability to extract target-relevant features in visually complex environments. Second, within the neck structure, a bidirectional feature pyramid network (BiFPN) is applied to strengthen the fusion of features across multiple spatial scales. Third, in the head, a content-aware dynamic upsampling module of DySample is adopted to enhance the reconstruction of spatial details and the preservation of object boundaries. Finally, the detection framework is integrated with the BoT-SORT tracking algorithm to achieve continuous multi-object association and dynamic state monitoring based on the filling status of RMBs. Experimental evaluation shows that the proposed YOLOv8n-RMB model achieves an AP@0.5 of 94.9%, an AP@0.5:0.95 of 89.7%, a precision of 91.3%, and a recall of 91.9%. Moreover, the performance improves by 2.7%, 2.9%, 3.9%, and 9.7%, compared with the original YOLOv8n. Plus, the total number of parameters is kept within 3.0 million, and the computational cost is limited to 8.3 GFLOPs. This model meets the requirements of yield assessment tasks by conducting computations in resource-limited environments for both fixed and mobile tapping robots in rubber plantations. Full article
(This article belongs to the Special Issue Plant Diagnosis and Monitoring for Agricultural Production)
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16 pages, 15460 KB  
Article
Visual Hull-Based Approach for Coronary Vessel Three-Dimensional Reconstruction
by Dominik Bernard Lau and Tomasz Dziubich
Appl. Sci. 2025, 15(19), 10450; https://doi.org/10.3390/app151910450 - 26 Sep 2025
Viewed by 529
Abstract
This paper addresses the problem of automatically reconstructing three-dimensional coronary vessel trees from a series of X-ray angiography images, a task which remains difficult, particularly with respect to solutions requiring no additional user input. This study analyses the performance of a visual hull-based [...] Read more.
This paper addresses the problem of automatically reconstructing three-dimensional coronary vessel trees from a series of X-ray angiography images, a task which remains difficult, particularly with respect to solutions requiring no additional user input. This study analyses the performance of a visual hull-based algorithm, producing the actual positions of heart arteries in the coordinate system, which is an approach not sufficiently explored in XRA images analysis. The proposed algorithm first creates a bounding cube using a novel heuristic and then iteratively projects the cube onto preprocessed 2D images, removing points too far from the depicted arteries. The method performance is first evaluated on a synthetic dataset through a series of experiments, and for a set of common clinical angles, 3D Dice of 75.25% and 78.61% reprojection Dice is obtained, which rivals the state-of-the-art machine learning methods. The findings suggest that the method offers a promising and interpretable alternative to black box methods on the synthethic dataset in question. Full article
(This article belongs to the Special Issue Novel Advances in Biomedical Signal and Image Processing)
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26 pages, 3901 KB  
Article
Towards Robotic Pruning: Automated Annotation and Prediction of Branches for Pruning on Trees Reconstructed Using RGB-D Images
by Jana Dukić, Petra Pejić, Ivan Vidović and Emmanuel Karlo Nyarko
Sensors 2025, 25(18), 5648; https://doi.org/10.3390/s25185648 - 10 Sep 2025
Viewed by 609
Abstract
This paper presents a comprehensive pipeline for automated prediction of branches to be pruned, integrating 3D reconstruction of fruit trees, automatic branch labeling, and pruning prediction. The workflow begins with capturing multi-view RGB-D images in orchard settings, followed by generating and preprocessing point [...] Read more.
This paper presents a comprehensive pipeline for automated prediction of branches to be pruned, integrating 3D reconstruction of fruit trees, automatic branch labeling, and pruning prediction. The workflow begins with capturing multi-view RGB-D images in orchard settings, followed by generating and preprocessing point clouds to reconstruct partial 3D models of pear trees using the TEASER++ algorithm. Differences between pre- and post-pruning models are used to automatically label branches to be pruned, creating a valuable dataset for both reconstruction methods and training machine learning models. A neural network based on PointNet++ is trained to predict branches to be pruned directly on point clouds, with performance evaluated through quantitative metrics and visual inspections. The pipeline demonstrates promising results, enabling real-time prediction suitable for robotic implementation. While some inaccuracies remain, this work lays a solid foundation for future advancements in autonomous orchard management, aiming to improve precision, speed, and practicality of robotic pruning systems. Full article
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24 pages, 6603 KB  
Article
Advancing Forest Inventory in Tropical Rainforests: A Multi-Source LiDAR Approach for Accurate 3D Tree Modeling and Volume Estimation
by Zongzhu Chen, Ziwei Lin, Tiezhu Shi, Dongping Deng, Yiqing Chen, Xiaoyan Pan, Xiaohua Chen, Tingtian Wu, Jinrui Lei and Yuanling Li
Remote Sens. 2025, 17(17), 3030; https://doi.org/10.3390/rs17173030 - 1 Sep 2025
Viewed by 1172
Abstract
This study proposes an Automatic Branch Modeling (ABM) framework that combines AdTree and AdQSM algorithms to reconstruct individual tree models and estimate timber volume from fused Hand-held Laser Scanners (HLS) and Unmanned Aerial Vehicle Laser Scanners (UAV-LS) point cloud data. The research focuses [...] Read more.
This study proposes an Automatic Branch Modeling (ABM) framework that combines AdTree and AdQSM algorithms to reconstruct individual tree models and estimate timber volume from fused Hand-held Laser Scanners (HLS) and Unmanned Aerial Vehicle Laser Scanners (UAV-LS) point cloud data. The research focuses on two 50 × 50 m primary tropical rainforest plots in Hainan Island, China, characterized by dense and vertically stratified vegetation. Key steps include multi-source point cloud registration and noise removal, individual tree segmentation using the Comparative Shortest Path (CSP) algorithm, extraction of diameter at breast height (DBH) and tree height, and 3D reconstruction and volume estimation via cylindrical fitting and convex polyhedron decomposition. Results demonstrate high accuracy in parameter extraction, with DBH estimation achieving R2 = 0.89–0.90, RMSE = 2.93–3.95 cm and RMSE% = 13.95–14.75%, while tree height estimation yielded R2 = 0.89–0.94, RMSE = 1.26–1.81 m and RMSE% = 9.41–13.2%. Timber volume estimates showed strong agreement with binary volume models (R2 = 0.90–0.94, RMSE = 0.10–0.18 m3, RMSE% = 32.33–34.65%), validated by concordance correlation coefficients (CCC) of 0.95–0.97. The fusion of HLS (ground-level trunk details) and UAV-LS (canopy structure) data significantly improved structural completeness, overcoming occlusion challenges in dense forests. This study highlights the efficacy of multi-source LiDAR fusion and 3D modeling for precise forest inventory in complex ecosystems. The ABM framework provides a scalable, non-destructive alternative to traditional methods, supporting carbon stock assessment and sustainable forest management in tropical rainforests. Future work should refine individual tree segmentation and wood-leaf separation to further enhance accuracy in heterogeneous environments. Full article
(This article belongs to the Special Issue Close-Range LiDAR for Forest Structure and Dynamics Monitoring)
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27 pages, 13231 KB  
Article
PosE-Enhanced Point Transformer with Local Surface Features (LSF) for Wood–Leaf Separation
by Xin Lu, Ruisheng Wang, Huaiqing Zhang, Ji Zhou and Ting Yun
Forests 2024, 15(12), 2244; https://doi.org/10.3390/f15122244 - 20 Dec 2024
Cited by 2 | Viewed by 1552
Abstract
Wood–leaf separation from forest LiDAR point clouds is a challenging task due to the complex and irregular structures of tree canopies. Traditional machine vision and deep learning methods often struggle to accurately distinguish between fine branches and leaves. This challenge arises primarily from [...] Read more.
Wood–leaf separation from forest LiDAR point clouds is a challenging task due to the complex and irregular structures of tree canopies. Traditional machine vision and deep learning methods often struggle to accurately distinguish between fine branches and leaves. This challenge arises primarily from the lack of suitable features and the limitations of existing position encodings in capturing the unique and intricate characteristics of forest point clouds. In this work, we propose an innovative approach that integrates Local Surface Features (LSF) and a Position Encoding (PosE) module within the Point Transformer (PT) network to address these challenges. We began by preprocessing point clouds and applying a machine vision technique, supplemented by manual correction, to create wood–leaf-separated datasets of forest point clouds for training. Next, we introduced Point Feature Histogram (PFH) to construct LSF for each point network input, while utilizing Fast PFH (FPFH) to enhance computational efficiency. Subsequently, we designed a PosE module within PT, leveraging trigonometric dimensionality expansion and Random Fourier Feature-based Transformation (RFFT) for nuanced feature analysis. This design significantly enhances the representational richness and precision of forest point clouds. Afterward, the segmented branch point cloud was used to model tree skeletons automatically, while the leaves were incorporated to complete the digital twin. Our enhanced network, tested on three different types of forests, achieved up to 96.23% in accuracy and 91.51% in mean intersection over union (mIoU) in wood–leaf separation, outperforming the original PT by approximately 5%. This study not only expands the limits of forest point cloud research but also demonstrates significant improvements in the reconstruction results, particularly in capturing the intricate structures of twigs, which paves the way for more accurate forest resource surveys and advanced digital twin construction. Full article
(This article belongs to the Special Issue Forest Parameter Detection and Modeling Using Remote Sensing Data)
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29 pages, 65789 KB  
Article
Near Real-Time Flood Monitoring Using Multi-Sensor Optical Imagery and Machine Learning by GEE: An Automatic Feature-Based Multi-Class Classification Approach
by Hadi Farhadi, Hamid Ebadi, Abbas Kiani and Ali Asgary
Remote Sens. 2024, 16(23), 4454; https://doi.org/10.3390/rs16234454 - 27 Nov 2024
Cited by 13 | Viewed by 4254
Abstract
Flooding is one of the most severe natural hazards, causing widespread environmental, economic, and social disruption. If not managed properly, it can lead to human losses, property damage, and the destruction of livelihoods. The ability to rapidly assess such damages is crucial for [...] Read more.
Flooding is one of the most severe natural hazards, causing widespread environmental, economic, and social disruption. If not managed properly, it can lead to human losses, property damage, and the destruction of livelihoods. The ability to rapidly assess such damages is crucial for emergency management. Near Real-Time (NRT) spatial information on flood-affected areas, obtained via remote sensing, is essential for disaster response, relief, urban and industrial reconstruction, insurance services, and damage assessment. Numerous flood mapping methods have been proposed, each with distinct strengths and limitations. Among the most widely used are machine learning algorithms and spectral indices, though these methods often face challenges, particularly in threshold selection for spectral indices and the sampling process for supervised classification. This study aims to develop an NRT flood mapping approach using supervised classification based on spectral features. The method automatically generates training samples through masks derived from spectral indices. More specifically, this study uses FWEI, NDVI, NDBI, and BSI indices to extract training samples for water/flood, vegetation, built-up areas, and soil, respectively. The Otsu thresholding technique is applied to create the spectral masks. Land cover classification is then performed using the Random Forest algorithm with the automatically generated training samples. The final flood map is obtained by subtracting the pre-flood water class from the post-flood image. The proposed method is implemented using optical satellite images from Sentinel-2, Landsat-8, and Landsat-9. The proposed method’s accuracy is rigorously evaluated and compared with those obtained from spectral indices and machine learning techniques. The suggested approach achieves the highest overall accuracy (OA) of 90.57% and a Kappa Coefficient (KC) of 0.89, surpassing SVM (OA: 90.04%, KC: 0.88), Decision Trees (OA: 88.64%, KC: 0.87), and spectral indices like AWEI (OA: 84.12%, KC: 0.82), FWEI (OA: 88.23%, KC: 0.86), NDWI (OA: 85.78%, KC: 0.84), and MNDWI (OA: 87.67%, KC: 0.85). These results underscore the superior accuracy and effectiveness of the proposed approach for NRT flood detection and monitoring using multi-sensor optical imagery. Full article
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24 pages, 5994 KB  
Article
Mapping Natural Populus euphratica Forests in the Mainstream of the Tarim River Using Spaceborne Imagery and Google Earth Engine
by Jiawei Zou, Hao Li, Chao Ding, Suhong Liu and Qingdong Shi
Remote Sens. 2024, 16(18), 3429; https://doi.org/10.3390/rs16183429 - 15 Sep 2024
Cited by 3 | Viewed by 1974
Abstract
Populus euphratica is a unique constructive tree species within riparian desert areas that is essential for maintaining oasis ecosystem stability. The Tarim River Basin contains the most densely distributed population of P. euphratica forests in the world, and obtaining accurate distribution data in [...] Read more.
Populus euphratica is a unique constructive tree species within riparian desert areas that is essential for maintaining oasis ecosystem stability. The Tarim River Basin contains the most densely distributed population of P. euphratica forests in the world, and obtaining accurate distribution data in the mainstream of the Tarim River would provide important support for its protection and restoration. We propose a new method for automatically extracting P. euphratica using Sentinel-1 and 2 and Landsat-8 images based on the Google Earth Engine cloud platform and the random forest algorithm. A mask of the potential distribution area of P. euphratica was created based on prior knowledge to save computational resources. The NDVI (Normalized Difference Vegetation Index) time series was then reconstructed using the preferred filtering method to obtain phenological parameter features, and the random forest model was input by combining the phenological parameter, spectral index, textural, and backscattering features. An active learning method was employed to optimize the model and obtain the best model for extracting P. euphratica. Finally, the map of natural P. euphratica forests with a resolution of 10 m in the mainstream of the Tarim River was obtained. The overall accuracy, producer’s accuracy, user’s accuracy, kappa coefficient, and F1-score of the map were 0.96, 0.98, 0.95, 0.93, and 0.96, respectively. The comparison experiments showed that simultaneously adding backscattering and textural features improved the P. euphratica extraction accuracy, while textural features alone resulted in a poor extraction effect. The method developed in this study fully considered the prior and posteriori information and determined the feature set suitable for the P. euphratica identification task, which can be used to quickly obtain accurate large-area distribution data of P. euphratica. The method can also provide a reference for identifying other typical desert vegetation. Full article
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16 pages, 2214 KB  
Review
Advancements in Wood Quality Assessment: Standing Tree Visual Evaluation—A Review
by Michela Nocetti and Michele Brunetti
Forests 2024, 15(6), 943; https://doi.org/10.3390/f15060943 - 30 May 2024
Cited by 8 | Viewed by 2612
Abstract
(1) The early assessment of wood quality, even while trees are standing, provides significant benefits for forest management, sales efficiency, and market diversification. Its definition cannot be in absolute terms but must always be linked to the material’s intended use. (2) In this [...] Read more.
(1) The early assessment of wood quality, even while trees are standing, provides significant benefits for forest management, sales efficiency, and market diversification. Its definition cannot be in absolute terms but must always be linked to the material’s intended use. (2) In this contribution, a review of the scientific literature is given to discuss the visually evaluable attributes that define wood quality in standing trees, the applicability of the techniques used for their assessment, and the effectiveness of these attributes and technologies in predicting quality, to finally highlight future research needs. (3) The visual characteristics generally used to evaluate wood quality are linked to stem form and dimension, branchiness, and stem damage, but their assessment is challenging due to time and resource constraints. To address these challenges, laser-based and image-based techniques have been applied in field surveys. (4) Laser scanners offer detailed and accurate measurements. Photogrammetry, utilizing images to reconstruct 3D models, provides a cost-effective and user-friendly alternative. Studies have demonstrated the effectiveness of these tools in surveying the visible properties of stems and branches, but further development is necessary for widespread application, particularly in software development, with faster and more effective algorithmic advancements for automatic recognition and subsequent measurement of pertinent characteristics being critical for enhancing tool usability. (5) However, predicting wood quality from these surveys remains challenging, with a limited correlation between the visible tree characteristics assessed and the sawn product quality. Empirical studies evaluating products downstream in the forest-wood supply chain could provide valuable insights. In this sense, the implementation of traceability systems could facilitate the linkage between data on standing trees and the quality of the sawn product. Also, further research is needed to develop models that can accurately predict internal tree characteristics and their impact on product quality. Full article
(This article belongs to the Section Wood Science and Forest Products)
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11 pages, 1054 KB  
Technical Note
IAVCP (Influenza A Virus Consensus and Phylogeny): Automatic Identification of the Genomic Sequence of the Influenza A Virus from High-Throughput Sequencing Data
by Anastasiia Iu. Paremskaia, Pavel Yu. Volchkov and Andrei A. Deviatkin
Viruses 2024, 16(6), 873; https://doi.org/10.3390/v16060873 - 29 May 2024
Cited by 1 | Viewed by 1991
Abstract
Recently, high-throughput sequencing of influenza A viruses has become a routine test. It should be noted that the extremely high diversity of the influenza A virus complicates the task of determining the sequences of all eight genome segments. For a fast and accurate [...] Read more.
Recently, high-throughput sequencing of influenza A viruses has become a routine test. It should be noted that the extremely high diversity of the influenza A virus complicates the task of determining the sequences of all eight genome segments. For a fast and accurate analysis, it is necessary to select the most suitable reference for each segment. At the same time, there is no standardized method in the field of decoding sequencing results that allows the user to update the sequence databases to which the reads obtained by virus sequencing are compared. The IAVCP (influenza A virus consensus and phylogeny) was developed with the goal of automatically analyzing high-throughput sequencing data of influenza A viruses. Its goals include the extraction of a consensus genome directly from paired raw reads. In addition, the pipeline enables the identification of potential reassortment events in the evolutionary history of the virus of interest by analyzing the topological structure of phylogenetic trees that are automatically reconstructed. Full article
(This article belongs to the Special Issue Virus Bioinformatics 2024)
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20 pages, 1302 KB  
Article
Enhancing Autonomous Underwater Vehicle Decision Making through Intelligent Task Planning and Behavior Tree Optimization
by Dan Yu, Hongjian Wang, Xu Cao, Zhao Wang, Jingfei Ren and Kai Zhang
J. Mar. Sci. Eng. 2024, 12(5), 791; https://doi.org/10.3390/jmse12050791 - 8 May 2024
Cited by 5 | Viewed by 2655
Abstract
The expansion of underwater scenarios and missions highlights the crucial need for autonomous underwater vehicles (AUVs) to make informed decisions. Therefore, developing an efficient decision-making framework is vital to enhance productivity in executing complex tasks within tight time constraints. This paper delves into [...] Read more.
The expansion of underwater scenarios and missions highlights the crucial need for autonomous underwater vehicles (AUVs) to make informed decisions. Therefore, developing an efficient decision-making framework is vital to enhance productivity in executing complex tasks within tight time constraints. This paper delves into task planning and reconstruction within the AUV control decision system to enable intelligent completion of intricate underwater tasks. Behavior trees (BTs) offer a structured approach to organizing the switching structure of a hybrid dynamical system (HDS), originally introduced in the computer game programming community. In this research, an intelligent search algorithm, MCTS-QPSO (Monte Carlo tree search and quantum particle swarm optimization), is proposed to bolster the AUV’s capacity in planning complex task decision control systems. This algorithm tackles the issue of the time-consuming manual design of control systems by effectively integrating BTs. By assessing a predefined set of subtasks and actions in tandem with the complex task scenario, a reward function is formulated for MCTS to pinpoint the optimal subtree set. The QPSO algorithm is then leveraged for subtree integration, treating it as an optimal path search problem from the root node to the leaf node. This process optimizes the search subtree, thereby enhancing the robustness and security of the control architecture. To expedite search speed and algorithm convergence, this paper recommends reducing the search space by pre-grouping conditions and states within the behavior tree. The efficacy and superiority of the proposed algorithm are validated through security and timeliness evaluations of the BT, along with comparisons with other algorithms for automatic AUV decision control behavior tree design. Ultimately, the effectiveness and superiority of the proposed algorithm are corroborated through simulations on a multi-AUV complex task platform, showcasing its practical applicability and efficiency in real-world underwater scenarios. Full article
(This article belongs to the Special Issue Unmanned Marine Vehicles: Perception, Planning, Control and Swarm)
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16 pages, 3895 KB  
Article
Barcoding Fails to Delimit Species in Mongolian Oedipodinae (Orthoptera, Acrididae)
by Lea-Sophie Kock, Elisabeth Körs, Martin Husemann, Lkhagvasuren Davaa and Lara-Sophie Dey
Insects 2024, 15(2), 128; https://doi.org/10.3390/insects15020128 - 12 Feb 2024
Cited by 6 | Viewed by 3013
Abstract
Mongolia, a country in central Asia, with its vast grassland areas represents a hotspot for Orthoptera diversity, especially for the Acrididae. For Mongolia, 128 Acrididae species have been documented so far, of which 41 belong to the subfamily Oedipodinae (band-winged grasshoppers). Yet, few [...] Read more.
Mongolia, a country in central Asia, with its vast grassland areas represents a hotspot for Orthoptera diversity, especially for the Acrididae. For Mongolia, 128 Acrididae species have been documented so far, of which 41 belong to the subfamily Oedipodinae (band-winged grasshoppers). Yet, few studies concerning the distribution and diversity of Oedipodinae have been conducted in this country. Molecular genetic data is almost completely absent, despite its value for species identification and discovery. Even, the simplest and most used data, DNA barcodes, so far have not been generated for the local fauna. Therefore, we generated the first DNA barcode data for Mongolian band-winged grasshoppers and investigated the resolution of this marker for species delimitation. We were able to assemble 105 DNA barcode (COI) sequences of 35 Oedipodinae species from Mongolia and adjacent countries. Based on this data, we reconstructed maximum likelihood and Bayesian inference phylogenies. We, furthermore, conducted automatic barcode gap discovery and used the Poisson tree process (PTP) for species delimitation. Some resolution was achieved at the tribe and genus level, but all delimitation methods failed to differentiate species by using the COI region. This lack of resolution may have multiple possible reasons, which likely differ between taxa: the lack of resolution in the Bryodemini may be partially explained by their massive genomes, implying the potential presence of large numbers of pseudogenes, while within the Sphingonotini incomplete lineage sorting and incorrect taxonomy are more likely explanations for the lack of signal. Further studies based on a larger number of gene fragments, including nuclear DNA, are needed to distinguish the species also at the molecular level. Full article
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18 pages, 6859 KB  
Article
Multi-View Jujube Tree Trunks Stereo Reconstruction Based on UAV Remote Sensing Imaging Acquisition System
by Shunkang Ling, Jingbin Li, Longpeng Ding and Nianyi Wang
Appl. Sci. 2024, 14(4), 1364; https://doi.org/10.3390/app14041364 - 7 Feb 2024
Cited by 8 | Viewed by 2039
Abstract
High-quality agricultural multi-view stereo reconstruction technology is the key to precision and informatization in agriculture. Multi-view stereo reconstruction methods are an important part of 3D vision technology. In the multi-view stereo 3D reconstruction method based on deep learning, the effect of feature extraction [...] Read more.
High-quality agricultural multi-view stereo reconstruction technology is the key to precision and informatization in agriculture. Multi-view stereo reconstruction methods are an important part of 3D vision technology. In the multi-view stereo 3D reconstruction method based on deep learning, the effect of feature extraction directly affects the accuracy of reconstruction. Aiming at the actual problems in orchard fruit tree reconstruction, this paper designs an improved multi-view stereo structure based on the combination of remote sensing and artificial intelligence to realize the accurate reconstruction of jujube tree trunks. Firstly, an automatic key frame extraction method is proposed for the DSST target tracking algorithm to quickly recognize and extract high-quality data. Secondly, a composite U-Net feature extraction network is designed to enhance the reconstruction accuracy, while the DRE-Net feature extraction enhancement network improved by the parallel self-attention mechanism enhances the reconstruction completeness. Comparison tests show different levels of improvement on the Technical University of Denmark (DTU) dataset compared to other deep learning-based methods. Ablation test on the self-constructed dataset, the MVSNet + Co U-Net + DRE-Net_SA method proposed in this paper improves 20.4% in Accuracy, 12.8% in Completion, and 16.8% in Overall compared to the base model, which verifies the real effectiveness of the scheme. Full article
(This article belongs to the Special Issue Advances in Unmanned Aerial Vehicle (UAV) System)
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22 pages, 5143 KB  
Article
A Deformable Shape Model for Automatic and Real-Time Dendrometry
by Lucas A. Wells and Woodam Chung
Forests 2023, 14(12), 2299; https://doi.org/10.3390/f14122299 - 23 Nov 2023
Viewed by 1634
Abstract
We present a stereo image-based algorithm for tree stem diameter measurement and form analysis. The algorithm uses planar parametric curves to represent two-dimensional projections of tree stems in stereo images. The curves evolve according to an energy formulation based on the gradients of [...] Read more.
We present a stereo image-based algorithm for tree stem diameter measurement and form analysis. The algorithm uses planar parametric curves to represent two-dimensional projections of tree stems in stereo images. The curves evolve according to an energy formulation based on the gradients of the images and inductive priors related to biomechanics and morphology of tree stems. After energy minimization, the curves are reconstructed to three dimensions, allowing for diameter measurements at any point along the height of the stem. We describe the algorithm and report the validation test results comparing predicted diameter measurements to external observations. Our findings demonstrate that the algorithm can automatically estimate diameters for trees within 20 m of the camera with an error of 5.52%. We highlight how this method can aid product value optimization through taper analysis and sweep or crook detection. A run-time analysis shows that the algorithm can estimate dendrometric variables for ten trees simultaneously at 15 frames per second on a consumer-grade computer. Furthermore, we discuss the opportunity to produce training data for machine learning algorithms that generalize across domains and eliminate the need to manually tune parameters. Full article
(This article belongs to the Special Issue New Development of Smart Forestry: Machine and Automation)
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22 pages, 10959 KB  
Article
Automatic Tree Height Measurement Based on Three-Dimensional Reconstruction Using Smartphone
by Yulin Shen, Ruwei Huang, Bei Hua, Yuanguan Pan, Yong Mei and Minghao Dong
Sensors 2023, 23(16), 7248; https://doi.org/10.3390/s23167248 - 18 Aug 2023
Cited by 8 | Viewed by 3648
Abstract
Tree height is a crucial structural parameter in forest inventory as it provides a basis for evaluating stock volume and growth status. In recent years, close-range photogrammetry based on smartphone has attracted attention from researchers due to its low cost and non-destructive characteristics. [...] Read more.
Tree height is a crucial structural parameter in forest inventory as it provides a basis for evaluating stock volume and growth status. In recent years, close-range photogrammetry based on smartphone has attracted attention from researchers due to its low cost and non-destructive characteristics. However, such methods have specific requirements for camera angle and distance during shooting, and pre-shooting operations such as camera calibration and placement of calibration boards are necessary, which could be inconvenient to operate in complex natural environments. We propose a tree height measurement method based on three-dimensional (3D) reconstruction. Firstly, an absolute depth map was obtained by combining ARCore and MidasNet. Secondly, Attention-UNet was improved by adding depth maps as network input to obtain tree mask. Thirdly, the color image and depth map were fused to obtain the 3D point cloud of the scene. Then, the tree point cloud was extracted using the tree mask. Finally, the tree height was measured by extracting the axis-aligned bounding box of the tree point cloud. We built the method into an Android app, demonstrating its efficiency and automation. Our approach achieves an average relative error of 3.20% within a shooting distance range of 2–17 m, meeting the accuracy requirements of forest survey. Full article
(This article belongs to the Section Sensor Networks)
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