Search Results (13,085)

Alginate oligosaccharides (AOS) are attractive candidates for prebiotic development, yet how oligosaccharide structure and baseline microbial community composition interact to shape fermentation remains an open question. In this study, we stratified fecal microbiota from healthy donors into operational genus-predominance groups (Bifidobacterium, Bacteroides, Faecalibacterium, or Blautia) and selected representative samples for in vitro fermentation of six structurally distinct AOS preparations (SAOS-1, SAOS-2, OAOS, UAOS, SMOS, and SGOS). Substrate consumption, short-chain fatty acid (SCFA) production, and shifts in microbial community structure were profiled. The six preparations differed in structural type, number-average molecular weight, and average degree of polymerization. Among them, SAOS-1 exhibited the most consistent utilization across all four groups and yielded the highest total SCFA production. SAOS-1 fermentation also attenuated inter-group community divergence and enriched several beneficial or functionally relevant taxa, including Bacteroides and Faecalibacterium. Interestingly, the magnitude and direction of microbial responses remained enterotype-dependent, with the Bacteroides-predominant group assembling the most complex fermentative consortium. These findings demonstrate that AOS structure and baseline microbial ecology jointly dictate fermentation outcomes, positioning SAOS-1 as a strong candidate for precision prebiotic development. This structure–community interaction paradigm provides a rational basis for the targeted deployment of marine oligosaccharides in personalized gut health strategies. Full article

Background: Tuber indicum is a rare edible and medicinal ectomycorrhizal fungus, and the polysaccharide fractions have attracted extensive research attention owing to their potent immunomodulatory potential. Objective/Methods: To systematically characterize the structural features and gut microbiota-mediated immunoregulatory mechanisms of water-extracted polysaccharide (TIWP) and alkali-extracted polysaccharide (TIAP) from T. indicum, two polysaccharide fractions were prepared and comprehensively structurally characterized in this study. Results: The maximum molecular weight of TIWP reached 2.65 × 10⁷ Da, which was dominated by glycosidic linkages of →3)-Glcp-(1→, →2,4)-Glcp-(1→ and →3,6)-Glcp-(1→. TIAP possessed a higher molecular weight up to 3.87 × 10⁷ Da, with predominant glycosidic bonds of →3,6)-Glcp-(1→, →4)-Glcp-(1→ and →2,4)-Glcp-(1→. In vivo bioactivity evaluation results demonstrated that both TIWP and TIAP significantly restored the proportions of CD3⁺ T and CD19⁺ B lymphocyte subsets in peripheral blood and spleen, and alleviated pathological damage in splenic and colonic tissues. Distinct regulatory patterns of gut microbiota were observed between the two polysaccharides: TIWP markedly enriched the genera Lactobacillus and Ruminiclostridium, whereas TIAP elevated the relative abundances of Lactobacillus and Alloprevotella. Untargeted metabolomics combined with KEGG pathway enrichment analysis revealed that TIWP and TIAP activated the pantothenic acid and coenzyme A biosynthesis pathway and the linoleic acid metabolism pathway. Conclusions: Collectively, TIWP and TIAP alleviated CTX-triggered immunosuppression through distinct “gut microbiota-metabolite-immunity” regulatory networks due to their structural disparities. This study provides a theoretical basis for the development of gut microecology-targeted functional foods with immunomodulatory functions. Full article

The spreading and film formation of organic polymer solutions on liquid surfaces are key processes in coating, printing, and interfacial processing. However, the mechanisms by which aqueous polymers regulate spreading kinetics and film morphology are not yet fully understood. In this study, the free spreading of Poly(3-hexylthiophene-2,5-diyl) (P3HT)/chlorobenzene solution on poly(vinyl alcohol) (PVA) aqueous surface was employed as a model system to investigate how PVA concentration, molecular weight, degree of hydrolysis, and temperature collectively govern spreading behavior and film formation. Video recording was used to monitor the evolution of the spreading and front-edge morphology, while step-profilometry, UV–visible absorption spectroscopy, and atomic force microscopy were employed to characterize the resulting films in terms of thickness distribution, optical uniformity, and surface roughness. The results reveal that PVA can significantly regulate both the spreading kinetics of P3HT/chlorobenzene droplets and the final film morphology. PVA concentration exhibited a non-monotonic effect on spreading behavior, with intermediate concentrations favoring larger spreading areas and more continuous films. Increasing the PVA molecular weight altered the concentration-dependent spreading window and enhanced asymmetry at the spreading front, whereas reducing the degree of hydrolysis decreased interfacial tension and thereby increased the thermodynamic driving force for spreading, yet the actual spreading rate remained constrained by molecular diffusion, interfacial adsorption, and chain-segment rearrangement. Temperature and a saturated chlorobenzene vapor atmosphere further modulated the interplay among solvent evaporation, interfacial driving force, and viscous dissipation. Under optimized conditions, the resulting P3HT films displayed uniform thickness profiles, consistent optical absorption, and nanoscale surface roughness, and could be repeatedly transferred, assembled into well-defined multilayer structures, and printed onto flexible and curved substrates. These findings demonstrate that PVA aqueous subphase provides a tunable low-shear route for transferable P3HT thin-film fabrication and suggests its potential applicability to other polymer film-forming systems. Full article

Anuran skin secretions are rich sources of bioactive metabolites whose composition may vary according to environmental conditions. In this study, skin secretions from two populations of Dendropsophus columbianus exposed to contrasting environmental conditions (Clarete and Las Guacas, Popayán, Cauca, Colombia) were evaluated for antifungal activity against Hemileia vastatrix, the causal agent of coffee leaf rust. Secretion from the Clarete population showed no significant inhibition of urediniospore germination (p = 0.9999). In contrast, secretion from Las Guacas, a polluted and poorly conserved environment, exhibited significant dose-dependent antifungal activity (p = 0.0004–<0.0001). Chromatographic profiles from Las Guacas were more complex than those from Clarete. Two fractions, designated 5* and 7*, reduced urediniospore germination to 17.6% and 9.6%, respectively, compared to the negative control (75.37%; p < 0.0001). LC-MS analysis detected low-molecular-weight singly charged compounds (400–1500 m/z) consistent with alkaloid-like secondary metabolites. Although no definitive structural identification was achieved, these findings highlight the chemical plasticity and biotechnological potential of D. columbianus for the sustainable control of coffee leaf rust. Full article

Live-attenuated rotavirus (RV) vaccines are the most effective interventions for preventing RV gastroenteritis (RVGE) in young children. However, the molecular basis of attenuation remains not well understood. Here, we describe a compact but comprehensive strategy to identify RV virulence determinants by combining low-passage bidirectional selection, sequence analysis, and segment-level phenotype testing via a reverse genetics infectious system. Using the virulent murine RV strain EW, virulence was quantified by diarrhea severity/duration and body-weight gain. Serial passaging in cell culture selected an attenuated population, which regained virulence after passaging in suckling mice. Sequence comparison of the virulent and attenuated EW populations revealed only seven amino acid differences. We summarized literature describing attenuation/virulence-associated mutations in various RV group A (RVA) strains and found previous findings identical or similar to four of the seven mutations: NSP4-T45M, VP4-S470L, VP4-T612A, and VP7-T75P. Virulent- and attenuated-type EW variants of VP2, VP4, VP7, and NSP4 were introduced individually, or as NSP4/VP7 or VP4/VP7 pairs, into a simian SA11-L2 backbone using an 11-plasmid reverse genetics system. Phenotyping of rescued viruses consistently linked cell-culture–adapted VP4 to enhanced replication in vitro and reduced virulence in suckling mice. In vivo passaging strongly favored VP4 residue S470 over cell-culture-selected L470. More generally, our findings (i) underscore VP4 and VP7 as key determinants of EW virulence, (ii) provide a practical framework for identifying driver mutations underlying RVA attenuation, and (iii) highlight attenuation-associated substitutions shared across diverse RVAs. Full article

Dioctyl adipate (DOA) and dioctyl sebacate (DOS) are widely used cold-resistance plasticizers; however, their low molecular weight and weak polarity result in poor thermal stability and migration resistance. Here, we report the synthesis and performance of bio-based cold-resistance plasticizers derived from trans-aconitic acid with enhanced migration resistance. Tri-n-butyl trans-aconitate (TBTA), tri-n-hexyl trans-aconitate (THTA), and tri-n-octyl trans-aconitate (TOTA) were synthesized via one-step esterification with aliphatic alcohols and applied in poly(vinyl chloride) (PVC). Compared with commercial plasticizers di-(2-ethylhexyl) phthalate (DEHP), tributyl citrate (TBC) and DOA, the synthesized plasticizers demonstrated excellent thermal stability and cold-resistance. After freezing treatment, the $T_g$ values of TBTA/PVC (18.99 °C) and THTA/PVC (20.88 °C) were lower than those of DEHP/PVC (22.74 °C). The branched architecture was supposed to strengthen interactions between plasticizers and PVC, improving volatility resistance and solvent extraction resistance. Compared with DOA/PVC at 48 h, TBTA/PVC, THTA/PVC and TOTA/PVC displayed volatility mass loss reduction of ~1.5%, 4% and 7%, respectively. Their extraction mass loss in ethanol decreased by 5–6%, while in petroleum ether, TBTA/PVC and TOTA/PVC dropped by 11.95% and 2.63%, respectively. These bio-based plasticizers are promising alternatives to the poor migration resistance of conventional low-temperature plasticizers. Full article

Maintaining a stable melt flow index (MFI) is a critical objective in industrial polypropylene production because MFI directly reflects polymer molecular weight and strongly influences downstream processing performance. Although the effects of catalyst formulation and hydrogen concentration on polypropylene properties are well established, the operational origins of residual fluctuations in MFI under highly stable industrial conditions remain poorly understood. In this work, the relationships between feedstock quality, process operation, and residual MFI variability were investigated during the production of a commercial polypropylene grade in an industrial gas-phase reactor. A dataset comprising 61 industrial observations was assembled by integrating laboratory quality measurements with operational variables related to hydrogen concentration, catalyst management, reactor hydrodynamics, thermal behavior, productivity, and fouling. In parallel, the concentrations of key catalyst inhibitors, including carbon oxides, sulfur compounds, water, oxygen, acetylene, methylacetylene, propadiene, arsine, and phosphine, were quantified before and after the use of a modified zeolite-based purification system. The purification process reduced catalyst poisons to ppb levels, producing polymer-grade propylene with monomer purity exceeding 99.95 wt.%. Under these highly controlled conditions, the production campaign exhibited remarkable quality stability, with an average MFI of 3.03 g/10 min and a coefficient of variation of only 6.63%. Principal component analysis revealed that two dominant operational domains could describe 86.49% of the total process variability. The first domain was associated with reactor hydrodynamics, fouling behavior, and thermal conditions, whereas the second domain was governed by catalyst-system variables and hydrogen-mediated chain-transfer mechanisms. Variable importance in projection analysis identified Plate Fouling Factor (VIP = 2.17), Production Rate (VIP = 1.33), and H₂/C₃ Ratio (VIP = 1.17) as the variables most strongly associated with residual MFI fluctuations. The results demonstrate that once feedstock-related disturbances are effectively minimized, residual MFI variability arises from interactions among the hydrodynamic, thermal, and catalytic operational domains rather than from a single controlling parameter. These findings provide new insights into process–quality relationships in industrial polypropylene manufacturing and establish a practical framework for identifying the operational origins of subtle fluctuations in polymer quality in highly stabilized production systems. Full article

Candida auris has emerged as a multidrug-resistant, healthcare-associated pathogen worldwide; however, outcome data on C. auris candidaemia in East Asia remain limited. We conducted a retrospective cohort study of adult patients with candidaemia who received antifungal therapy at a tertiary hospital in Seoul, Republic of Korea, from January 2023 to December 2024, comparing C. auris with other Candida species. Confounding was addressed by inverse probability of treatment weighting (IPTW) using a five-covariate propensity score (age, Charlson Comorbidity Index, septic shock, ICU admission at antifungal initiation, and concomitant Gram-negative infection). Among 423 patients, C. auris accounted for 6.9% of cases and was uniformly fluconazole non-susceptible, with frequent high-level caspofungin resistance but preserved micafungin and anidulafungin susceptibility. Patients with C. auris were older, with greater comorbidity and more frequent ICU admission at antifungal initiation. After IPTW adjustment, C. auris was not associated with higher 30-day mortality, the primary outcome (adjusted hazard ratio 0.59, 95% CI 0.26–1.32); the wide confidence interval indicates limited precision rather than equivalence, and results were directionally consistent for 90-day and in-hospital mortality and across sensitivity analyses that varied both the comparison cohort and the analytic method. Residual confounding by unmeasured illness severity and limited precision preclude concluding equivalence. Continued surveillance, molecular characterisation, and infection control remain essential. Full article

Excessive gestational weight gain (EGWG) promotes adverse physiological and molecular changes in the placenta. In the present study, we examined the whole placental transcriptomic profile in women with EGWG to elucidate the molecular basis of EGWG pathogenesis. Whole transcriptome profile was analyzed in placentas from term patients with EGWG compared to controls using RNA-seq. Eight genes were found to be downregulated, and 318 genes were found to be upregulated in the placentas of the EGWG group in comparison with those of the women with adequate gestational weight gain (AGWG). Analysis of differentially expressed genes showed eight biological processes, nine cellular components, and ten molecular functions activated, and ten biological processes, ten cellular components, and ten molecular functions suppressed in the placentas from women with EGWG compared to AGWG. EGWG is characterized by significant alterations in placental gene expression, impacting various biological processes, cellular components, and molecular functions, including activation of chromatin organization and remodeling, nucleoplasm, and histone-modifying activity, and suppression of response to stimulus, organelle, and protein binding. Full article

A major Chinese woody oil plant with unsaturated-fatty-acid-rich seeds for biodiesel and edible oil, Xanthoceras sorbifolium tolerates drought but not waterlogging; salicylic acid (SA), a key stress response signal, is inexpensive, safe, and effective for enhancing stress tolerance. Two-year-old saplings of Xanthoceras sorbifolium were used as materials. They were sprayed with 0.5 mmol·L⁻¹ SA for 3 days (based on prior studies), and then waterlogged for 10 days; physiological and transcriptomic data were collected. SA significantly increased height, diameter, and root dry weight by 392.6%, 450.0%, and 242.4% compared to water control; enhanced osmotic regulatory substances, antioxidant enzyme activities, secondary metabolites, and root activity; and reduced malondialdehyde content and relative electrical conductivity by 23.40% and 148.7%. SA-enhanced antioxidant defense correlated with synergistic transcriptional regulation. Transcriptome analysis showed that SA up-regulated key enzyme genes involved in flavonoid synthesis, such as PAL and 4CL, and regulated hormone signal transduction-related genes such as SAUR and DELLA. Key transcription factor genes were also screened, mainly including members of the MYB, bHLH, and ERF families. SA alleviated waterlogging damage. Meanwhile, this study provides valuable insights into the molecular basis of the response to waterlogging stress regulated by salicylic acid, and offers important theoretical and practical significance for the promotion and cultivation of Xanthoceras sorbifolium in rainy southern regions of China. Full article

Maintaining effective fluid-loss control in water-based drilling fluids under coupled high-salinity, high-temperature, and high-density conditions remains a critical challenge in deep and ultra-deep drilling operations. In this study, a low-molecular-weight polymer fluid-loss additive (LM-ASQF) was synthesized via redox-initiated copolymerization of acrylamide, dimethyldiallylammonium chloride, and sodium allyl sulfonate. The synthesis route and proposed polymer structure were further illustrated to clarify the incorporation of amide, quaternary ammonium, and sulfonate functional units within the LM-ASQF molecular architecture. The polymer exhibited a controllable number-average molecular weight of 18.2–29.4 kDa with a unimodal distribution. Thermal analysis confirmed that no main-chain-dominated degradation occurred below 220 °C, indicating structural stability under high-temperature conditions. In drilling-fluid systems containing NaCl, CaCl₂, and mixed salts (0–20%), LM-ASQF maintained stable rheological properties, with apparent viscosity ranging from 26.1 to 41.6 mPa·s, while the API fluid loss was controlled within 5.8–11.2 mL. After thermal aging at 220 °C for 16 h, the API fluid loss remained below 13 mL in both freshwater and mixed-salt systems. In high-density systems (1.80–2.40 g/cm³), the drilling fluids preserved continuous rheological structures and showed no abrupt increase in filtration. Mechanistically, fluid-loss control was primarily attributed to synergistic interfacial adsorption of amide groups, hydration stabilization induced by sulfonate functionalities, and particle rearrangement-driven filter-cake densification, rather than viscosity enhancement through long-chain entanglement. This mechanism enables effective filtration control without excessive viscosity increase, thereby maintaining rheological compatibility under complex conditions. These results demonstrate that the low-molecular-weight design strategy provides a reliable approach for achieving stable fluid-loss control in water-based drilling fluids under high salinity, elevated temperature, and high-density conditions. Full article

Although early-maturing table grapes possess significant commercial value, the metabolic impact of shortened ripening cycles on aroma-quality interactions remains underexplored. This study comprehensively characterized seven cultivars via integrated physicochemical phenotyping (firmness, total soluble solids, and phenolic content) coupled with a multi-platform volatile analysis using E-nose, GC–MS, and GC–IMS. Based on instrumental volatile profiling, the cultivars were classified into three aroma-related groups: a Muscat-type (HY, HMG, JM), enriched in floral monoterpenes; a Strawberry-type (XL, ZML), dominated by fruity, honey-like esters and aldehydes; and a Neutral-type (CG, SB), defined by herbaceous C₆ compounds. Notably, the combined use of E-nose, GC–MS, and GC–IMS provided complementary information for differentiating cultivar-specific volatile profiles. In particular, GC–IMS improved the detection of trace low-molecular-weight volatiles, thereby refining the characterization of cultivar-dependent aroma-related compounds. These findings provide an instrumental basis for understanding volatile differences among early-maturing table grapes and offer useful information for cultivar evaluation, flavor-oriented breeding, and postharvest quality management. Full article

Amphibian malformation syndromes significantly impact both conservation efforts and aquaculture, yet their underlying systemic pathophysiological mechanisms remain poorly characterized. This study comprehensively examines the multi-level pathological processes associated with the “short-leg” malformation syndrome in the black-spotted frog (Pelophylax nigromaculatus) using an integrated methodology, encompassing morphological, histopathological, gut microbiome, and hepatic transcriptomic analyses. Affected frogs demonstrated shortened limbs, impaired motor function, and a distinctive metabolic phenotype, including increased body weight despite a shorter body length, accumulation of visceral fat, and shortened intestines. Gut microbiota analysis identified significant compositional shifts, characterized by a decreased Firmicutes-to-Bacteroidota ratio, expansion of pro-inflammatory Proteobacteria, and reduction in beneficial Actinobacteriota, suggesting microbial niche restructuring that likely promotes metabolic and inflammatory disorders. Hepatic transcriptome profiling revealed 2617 differentially expressed genes, demonstrating a clear molecular dichotomy with concurrent up-regulation of immune-related pathways (e.g., neutrophil extracellular trap formation, complement cascades, and inflammatory signaling) and broad suppression of metabolic pathways (e.g., lipid oxidation, nutrient absorption, and PPAR and renin–angiotensin systems). This integrated analysis illustrates that the malformation syndrome represents a systemic pathophysiological state involving dysfunction of the gut–liver axis, characterized by the coexistence of gut microbiota alterations, hepatic metabolic suppression, and immune activation. These findings provide a framework for understanding amphibian malformations and suggest potential strategies to improve health outcomes in aquaculture. Full article

Background/Objectives: Diagnostic metabolites measured in newborn screening, inherited metabolic disease, lysosomal storage disease, oncometabolite testing and routine clinical biochemistry are direct read-outs of human metabolic state. Their mechanistic interpretation requires linking measured metabolites to enzymes, pathways, regulatory context, disease knowledge and, increasingly, AI-assisted quantitative systems pharmacology (AI-QSP) workflows. We developed EHMN2026^®T as a license-aware AI-QSP integration framework that connects the EHMN2026^® metabolic backbone with licensed geneXplain knowledge resources while keeping ownership, licensing and redistribution constraints explicit. Methods: EHMN2026^®T integrates the SBML-encoded EHMN2026^® metabolic backbone with licensed TRANSFAC^® 2025.2, TRANSPATH^® 2025.2 and HumanPSD™ 2025.2 resources. TRANSFAC^® position weight matrices were used for promoter-level analysis of EHMN metabolic genes. The resulting transcription factor (TF)–gene connections were mapped to EHMN genes, TRANSPATH^® signalling/molecular-state entries and HumanPSD™ disease/drug context. The framework is positioned as a controlled component of the IQANOVA AI-QSP environment, but only aggregate statistics, non-proprietary EHMN-derived summaries and manuscript-level examples are reported publicly unless separate permission is obtained from the relevant rightsholders. Results: Promoter analysis of 1681 EHMN2026^® metabolic genes using 1147 mapped TRANSFAC^® matrices identified 291,387 ENSG-level TF–gene regulatory-potential connections involving 398 TFs and 1,107,264 predicted binding sites. The diagnostic panel contained 80 covered genes (63.5%), including complete coverage of oncometabolite enzymes and high coverage of organic acidaemia, steroidogenesis and fatty-acid oxidation categories. Mapping to TRANSPATH^® expanded the EHMN genes into 144,529 molecular-state representations and 14,879 gene–pathway or gene–chain pairs. HumanPSD™ was used as a licensed translational context layer; EHMN-specific HumanPSD™ outputs are treated as license-controlled derived outputs and are therefore not redistributed as open detailed tables in this manuscript. Conclusions: EHMN2026^®T provides a license-aware AI-QSP integration framework for tracing a diagnostic metabolite from a measured clinical value to candidate enzyme nodes, regulatory potential, signalling/molecular-state context and disease or therapeutic interpretation. PWM-derived TF–gene links are presented as regulatory hypotheses, not proof of active regulation. Public release should be limited to aggregate statistics and non-proprietary EHMN-derived components; detailed TRANSFAC^®, TRANSPATH^® and HumanPSD™-derived edges, mappings, annotations and SBML outputs remain subject to geneXplain ownership and licensing terms. Full article

Hepcidin is a multifunctional peptide involved in innate immunity and iron homeostasis, yet its earliest developmental regulation in sturgeons remains poorly understood. Here, we investigated maternal loading and embryonic expression patterns of hepcidin transcripts (hamp) in Siberian sturgeon (Acipenser baerii). RT-qPCR detected hamp transcripts in all 17 unfertilized egg (UFE) batches examined; however, maternally loaded transcript abundance varied markedly among batches, with up to a 14.8-fold difference, indicating substantial heterogeneity in the molecular starting state of embryos. In contrast, female traits, including age, body weight, and condition factor, as well as fertilization rate and hatching success, were not significantly correlated with UFE hamp transcript abundance (Spearman’s rank correlation with BH-FDR adjustment; q > 0.05). Developmental expression analysis from UFE to first hatch was then performed using five developmental series (DevSeries 1–5) that represented relatively high, intermediate, and low UFE baseline levels within the statistically differentiated UFE dataset (Welch ANOVA/Games–Howell post hoc, p < 0.05). The developmental dataset showed significant DevSeries, stage, and DevSeries × stage effects, indicating that embryonic hamp expression profiles differed among DevSeries (two-way ANOVA, p < 0.05). High-loading DevSeries (DevSeries 2 and 4) showed prolonged early persistence followed by later re-elevation, whereas low-loading DevSeries (DevSeries 3 and 5) maintained lower overall abundance but displayed more evident stage-linked increases during embryogenesis. Collectively, these findings show that maternally loaded hamp transcripts are associated with embryonic expression profiles and support the view that maternal transcript abundance provides an initial baseline that should be considered when interpreting early developmental expression profiles of immune- and iron-regulation-related genes in this chondrostean species. Full article